F370316

General Info

Members Datasets Scaffolds Average Seq Length
261 170 257 575

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10001887|Ga0105237_100018875
Length 616
Sequence MVSGETVPETINTLIKSKLTKGVTTIMLTICIPFVTYLLYSPSHFIIPIKTTYFTAIKYPMLKKLLFPALILCAGLACAQKTPTTVDAYYPLLRKTFNENNAYKTTAFVEQRWRVPGNSGFNQSIYEVEKLLQAAGFKKEVKGETDGPLTYRLETRELRQPAWDPINAEVTIEGEQQPLLKFATNRNMLAMNSGSTPAGGVTAEVVYVDRNELKNLSPEKVKGKIVFAETSTSQVYSAAVKNGALGAFGYSMPAYTQPEKNVNSIQFGGIRNDDTLSHNFGIYLSYQAKERLKAALAKGPVKVHVVTESKIYTSKELTLVANARGSVKPDERFVFSAHVQEPGANDNASGVGTLAEMARVTAELVSQKKFNPERTVTFLWGVEISSTARYIVGEDTQKTGGTFLIEKMPDPSAIWTRGEDKHTEWGGSVLAEKDMFPHYFNDLVLDRCKQQGKENGWVVKSNPFEGGSDHTPFLQAKIPGLLMWHFTDVFYHTDADRLDKVSPWEMKNCGVSALATAYTLIAASEATTLSLVAELQKNATDRLQAEYQLGMQAIKGGSPAADERHKIDVWAKWYVDAIGKMTDINVVGVTSPISSSIASAQKTVSELNGKLNEGLK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2738541284 Pedobacter sp. YR016 Isolate Unclassified
4 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
5 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
75 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
76 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
79 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
80 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
81 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
111 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
123 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
138 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
139 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
147 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
148 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
170 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.47
Metatranscriptomes 0
Isolates 1.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.3
Nodule 0
Rhizoplane 1.53
Rhizosphere 90.8
Stem 0
Stem Tuber 0
Unclassified 5.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2628285 2162886007 Bacteria 16150
2 Ga0065714_10002327 3300005288 Bacteria 39426
3 Ga0065714_10002519 3300005288 Bacteria 28238
4 Ga0065714_10078158 3300005288 Bacteria 2623
5 Ga0065704_10000253 3300005289 Bacteria 50631
6 Ga0065712_10102361 3300005290 Unclassified 2001
7 Ga0070676_10000673 3300005328 Bacteria 16675
8 Ga0070683_100000310 3300005329 Bacteria 33535
9 Ga0070683_100003446 3300005329 Bacteria 12844
10 Ga0070683_100005872 3300005329 Bacteria 10273
11 Ga0070683_100047981 3300005329 Bacteria 3947
12 Ga0070683_100075174 3300005329 Bacteria 3156
13 Ga0070690_100006313 3300005330 Bacteria 6722
14 Ga0070670_100003918 3300005331 Bacteria 12418
15 Ga0070670_100026693 3300005331 Bacteria 4968
16 Ga0068869_100037720 3300005334 Bacteria 3437
17 Ga0068869_100094619 3300005334 Unclassified 2253
18 Ga0070680_100000114 3300005336 Bacteria 46929
19 Ga0068868_100009969 3300005338 Bacteria 6862
20 Ga0070660_100011042 3300005339 Bacteria 6402
21 Ga0070689_100066280 3300005340 Bacteria 2813
22 Ga0070661_100003223 3300005344 Bacteria 11242
23 Ga0070661_100005071 3300005344 Bacteria 9082
24 Ga0070669_100001836 3300005353 Bacteria 15317
25 Ga0070675_100087067 3300005354 Unclassified 2612
26 Ga0070671_100012035 3300005355 Bacteria 6961
27 Ga0070671_100070848 3300005355 Unclassified 2909
28 Ga0070659_100018930 3300005366 Bacteria 5203
29 Ga0070711_100009394 3300005439 Bacteria 6024
30 Ga0070708_100000030 3300005445 Bacteria 96247
31 Ga0070662_100002475 3300005457 Bacteria 11379
32 Ga0070681_10000280 3300005458 Bacteria 40938
33 Ga0070681_10000913 3300005458 Bacteria 24949
34 Ga0070681_10006462 3300005458 Bacteria 11409
35 Ga0070681_10011346 3300005458 Bacteria 8815
36 Ga0068867_100054686 3300005459 Bacteria 2949
37 Ga0068867_100074535 3300005459 Bacteria 2544
38 Ga0070679_100000928 3300005530 Bacteria 25490
39 Ga0070679_100009861 3300005530 Bacteria 9036
40 Ga0070679_100015790 3300005530 Bacteria 7264
41 Ga0070679_100078739 3300005530 Bacteria 3285
42 Ga0070684_100033727 3300005535 Bacteria 4374
43 Ga0070684_100119087 3300005535 Unclassified 2374
44 Ga0070684_100199871 3300005535 Unclassified 1820
45 Ga0068853_100146965 3300005539 Bacteria 2119
46 Ga0070672_100011309 3300005543 Bacteria 6225
47 Ga0068855_100019023 3300005563 Bacteria 8256
48 Ga0068855_100019619 3300005563 Bacteria 8121
49 Ga0068855_100034902 3300005563 Bacteria 5994
50 Ga0070664_100000956 3300005564 Bacteria 22581
51 Ga0070664_100023277 3300005564 Bacteria 5116
52 Ga0070664_100035626 3300005564 Bacteria 4178
53 Ga0070664_100044872 3300005564 Unclassified 3733
54 Ga0068857_100059138 3300005577 Bacteria 3404
55 Ga0068854_100034109 3300005578 Bacteria 3553
56 Ga0068856_100005278 3300005614 Bacteria 12744
57 Ga0070702_100032205 3300005615 Unclassified 2876
58 Ga0068852_100014920 3300005616 Bacteria 6004
59 Ga0068852_100027643 3300005616 Bacteria 4626
60 Ga0068864_100076596 3300005618 Unclassified 2923
61 Ga0068861_100005197 3300005719 Bacteria 8772
62 Ga0068861_100011012 3300005719 Bacteria 6286
63 Ga0068851_10018961 3300005834 Bacteria 3321
64 Ga0068863_100013615 3300005841 Bacteria 7845
65 Ga0068863_100036502 3300005841 Unclassified 4682
66 Ga0068860_100031493 3300005843 Bacteria 5098
67 Ga0068862_100001547 3300005844 Bacteria 21044
68 Ga0075366_10002102 3300006195 Bacteria 10131
69 Ga0097621_100017227 3300006237 Bacteria 5483
70 Ga0075428_100007897 3300006844 Bacteria 11795
71 Ga0075430_100003032 3300006846 Bacteria 14048
72 Ga0075430_100013199 3300006846 Bacteria 7039
73 Ga0075430_100039171 3300006846 Bacteria 4014
74 Ga0075430_100115832 3300006846 Bacteria 2233
75 Ga0075431_100021022 3300006847 Bacteria 6669
76 Ga0075431_100048891 3300006847 Bacteria 4362
77 Ga0075433_10002680 3300006852 Bacteria 13596
78 Ga0075434_100002004 3300006871 Bacteria 17681
79 Ga0068865_100012922 3300006881 Bacteria 5266
80 Ga0105240_10085977 3300009093 Bacteria 3852
81 Ga0111539_10144474 3300009094 Bacteria 2785
82 Ga0105245_10032746 3300009098 Bacteria 4602
83 Ga0105245_10045631 3300009098 Bacteria 3914
84 Ga0114129_10008923 3300009147 Bacteria 14290
85 Ga0114129_10100391 3300009147 Unclassified 4005
86 Ga0105242_10042924 3300009176 Bacteria 3655
87 Ga0105248_10004088 3300009177 Bacteria 16138
88 Ga0105248_10152027 3300009177 Bacteria 2612
89 Ga0105237_10001887 3300009545 Bacteria 26751
90 Ga0105237_10025235 3300009545 Bacteria 6079
91 Ga0105237_10033703 3300009545 Bacteria 5188
92 Ga0105249_10000703 3300009553 Bacteria 30325
93 Ga0105249_10040382 3300009553 Bacteria 4238
94 Ga0105239_10000006 3300010375 Bacteria 442319
95 Ga0105239_10000936 3300010375 Bacteria 41213
96 Ga0157373_10000099 3300013100 Bacteria 70935
97 Ga0157373_10013992 3300013100 Bacteria 5881
98 Ga0157371_10000861 3300013102 Bacteria 34609
99 Ga0157371_10001605 3300013102 Bacteria 23183
100 Ga0157371_10002361 3300013102 Bacteria 18061
101 Ga0157371_10023907 3300013102 Unclassified 4465
102 Ga0157370_10001245 3300013104 Bacteria 31803
103 Ga0157370_10005098 3300013104 Bacteria 14820
104 Ga0157370_10040047 3300013104 Bacteria 4525
105 Ga0157369_10000450 3300013105 Bacteria 54555
106 Ga0157369_10064672 3300013105 Bacteria 3939
107 Ga0157369_10067207 3300013105 Bacteria 3854
108 Ga0157378_10028088 3300013297 Bacteria 4962
109 Ga0163162_10014857 3300013306 Bacteria 7603
110 Ga0163162_10057612 3300013306 Bacteria 3913
111 Ga0163162_10083671 3300013306 Bacteria 3265
112 Ga0157372_10008368 3300013307 Bacteria 10997
113 Ga0157372_10008602 3300013307 Bacteria 10845
114 Ga0157372_10030374 3300013307 Bacteria 5913
115 Ga0157375_10006875 3300013308 Bacteria 9923
116 Ga0157375_10018256 3300013308 Bacteria 6358
117 Ga0163163_10002398 3300014325 Bacteria 15869
118 Ga0182008_10000021 3300014497 Bacteria 227140
119 Ga0157377_10000713 3300014745 Bacteria 13735
120 Ga0157377_10004662 3300014745 Bacteria 6343
121 Ga0157379_10006466 3300014968 Bacteria 10100
122 Ga0182006_1000064 3300015261 Bacteria 153418
123 Ga0182007_10000016 3300015262 Bacteria 202375
124 Ga0183373_1011 3300015682 Bacteria 138873
125 Ga0163161_10002182 3300017792 Bacteria 14113
126 Ga0163161_10020435 3300017792 Bacteria 4646
127 Ga0213876_10004071 3300021384 Bacteria 8219
128 Ga0209646_1000947 3300025246 Bacteria 9128
129 Ga0209026_1000957 3300025250 Bacteria 14477
130 Ga0209455_1006126 3300025272 Bacteria 3607
131 Ga0207645_10000270 3300025907 Bacteria 42809
132 Ga0207643_10008007 3300025908 Bacteria 5671
133 Ga0207707_10002450 3300025912 Bacteria 16702
134 Ga0207707_10036233 3300025912 Bacteria 4314
135 Ga0207695_10002459 3300025913 Bacteria 27370
136 Ga0207695_10090945 3300025913 Bacteria 3066
137 Ga0207695_10168483 3300025913 Bacteria 2117
138 Ga0207663_10011887 3300025916 Unclassified 4688
139 Ga0207660_10001735 3300025917 Bacteria 14609
140 Ga0207660_10018754 3300025917 Bacteria 4618
141 Ga0207660_10021255 3300025917 Unclassified 4363
142 Ga0207662_10008720 3300025918 Bacteria 5561
143 Ga0207652_10019757 3300025921 Bacteria 5544
144 Ga0207681_10003636 3300025923 Bacteria 9587
145 Ga0207681_10005360 3300025923 Bacteria 7880
146 Ga0207681_10035664 3300025923 Bacteria 3279
147 Ga0207650_10009142 3300025925 Bacteria 6772
148 Ga0207659_10052585 3300025926 Bacteria 2902
149 Ga0207659_10121069 3300025926 Unclassified 2006
150 Ga0207706_10000834 3300025933 Bacteria 32009
151 Ga0207706_10004742 3300025933 Bacteria 12731
152 Ga0207686_10010529 3300025934 Bacteria 5038
153 Ga0207704_10024739 3300025938 Bacteria 3263
154 Ga0207691_10001241 3300025940 Bacteria 25452
155 Ga0207691_10005004 3300025940 Bacteria 12786
156 Ga0207661_10029130 3300025944 Bacteria 4237
157 Ga0207679_10061516 3300025945 Bacteria 2795
158 Ga0207667_10030844 3300025949 Bacteria 5794
159 Ga0207651_10065479 3300025960 Bacteria 2549
160 Ga0207712_10000842 3300025961 Bacteria 22488
161 Ga0207712_10005360 3300025961 Bacteria 8100
162 Ga0207668_10016661 3300025972 Bacteria 4591
163 Ga0207648_10040369 3300026089 Bacteria 4101
164 Ga0207676_10001504 3300026095 Bacteria 17204
165 Ga0207674_10000727 3300026116 Bacteria 42976
166 Ga0207674_10001559 3300026116 Bacteria 29523
167 Ga0207674_10002065 3300026116 Bacteria 25476
168 Ga0207674_10076581 3300026116 Bacteria 3353
169 Ga0207674_10140970 3300026116 Bacteria 2370
170 Ga0207675_100004100 3300026118 Bacteria 14102
171 Ga0207675_100011471 3300026118 Bacteria 8288
172 Ga0207698_10016883 3300026142 Bacteria 4935
173 Ga0268266_10069669 3300028379 Bacteria 3048
174 Ga0268265_10001874 3300028380 Bacteria 16713
175 Ga0268265_10119583 3300028380 Unclassified 2168
176 Ga0307515_10000003 3300028794 Bacteria 891317
177 Ga0307515_10004941 3300028794 Bacteria 27236
178 Ga0307515_10023678 3300028794 Bacteria 10742
179 Ga0265332_10004342 3300031238 Bacteria 6672
180 Ga0307513_10145548 3300031456 Bacteria 2288
181 Ga0307509_10038286 3300031507 Bacteria 5234
182 Ga0307408_100002637 3300031548 Bacteria 12470
183 Ga0265314_10007192 3300031711 Bacteria 9688
184 Ga0307413_10006491 3300031824 Bacteria 5349
185 Ga0307413_10035449 3300031824 Bacteria 2862
186 Ga0307410_10022026 3300031852 Bacteria 3931
187 Ga0307412_10000091 3300031911 Bacteria 78460
188 Ga0307412_10027561 3300031911 Bacteria 3545
189 Ga0307414_10000038 3300032004 Bacteria 150774
190 Ga0307414_10003313 3300032004 Bacteria 8588
191 Ga0307414_10040578 3300032004 Bacteria 3145
192 Ga0307415_100023177 3300032126 Bacteria 3849
193 Ga0373955_0043374 3300035172 Unclassified 2420
194 Ga0373935_0019764 3300035692 Bacteria 4109
195 Ga0373933_0011596 3300035724 Unclassified 4863
196 Ga0373937_0000174 3300036401 Bacteria 62999
197 Ga0373925_0024666 3300037068 Bacteria 4391
198 Ga0436365_0090513 3300039437 Bacteria 14251
199 Ga0436365_1070036 3300039437 Bacteria 5314
200 Ga0439449_0017964 3300042007 Bacteria 2655
201 Ga0451577_0110165 3300042876 Bacteria 2462
202 Ga0466969_0000152 3300044656 Bacteria 37627
203 Ga0466972_0000104 3300044658 Bacteria 73886
204 Ga0466966_0000567 3300044684 Bacteria 23584
205 Ga0453684_0155092 3300044712 Bacteria 2716
206 Ga0466957_0000387 3300044842 Bacteria 21556
207 Ga0466959_0000016 3300045049 Bacteria 144600
208 Ga0451576_0049236 3300045051 Bacteria 4422
209 Ga0451576_0070025 3300045051 Unclassified 3651
210 Ga0466967_0029026 3300045976 Unclassified 4625
211 Ga0466967_0062653 3300045976 Bacteria 3302
212 Ga0495629_0009964 3300046459 Bacteria 6935
213 Ga0495585_0002707 3300046492 Bacteria 12407
214 Ga0495594_0007127 3300046499 Bacteria 5752
215 Ga0495606_0094552 3300046507 Bacteria 1832
216 Ga0495628_0052498 3300046516 Bacteria 3220
217 Ga0495648_0005671 3300046524 Bacteria 10329
218 Ga0495666_0034236 3300046526 Bacteria 2479
219 Ga0495586_0026882 3300046535 Unclassified 3079
220 Ga0495586_0030540 3300046535 Bacteria 2883
221 Ga0495645_0000197 3300046543 Bacteria 43348
222 Ga0495633_0000072 3300046558 Bacteria 131197
223 Ga0495668_0000041 3300046616 Bacteria 229462
224 Ga0495625_0000983 3300046660 Bacteria 37817
225 Ga0495625_0005737 3300046660 Bacteria 11221
226 Ga0495623_0022598 3300046679 Bacteria 4061
227 Ga0495658_0031017 3300046683 Unclassified 2907
228 Ga0495600_0091805 3300046809 Unclassified 1981
229 Ga0495672_0003808 3300047320 Bacteria 12701
230 Ga0496108_0123278 3300048911 Bacteria 2224
231 Ga0496109_0112706 3300048912 Unclassified 2529
232 Ga0496112_0002330 3300048915 Bacteria 15237
233 Ga0496115_0058898 3300048918 Bacteria 3092
234 Ga0501034_0117471 3300049571 Bacteria 2647
235 Ga0501034_0190805 3300049571 Bacteria 2011
236 Ga0501043_0050811 3300049579 Unclassified 3259
237 Ga0501047_0040898 3300049581 Bacteria 4482
238 Ga0501219_000516 3300049703 Bacteria 5847
239 Ga0501044_0005207 3300049823 Bacteria 14477
240 Ga0501044_0013217 3300049823 Bacteria 8940
241 Ga0501044_0066218 3300049823 Bacteria 3684
242 Ga0501044_0088684 3300049823 Bacteria 3122
243 Ga0501284_00005 3300050005 Bacteria 164758
244 nmdc:mga0k408_124_c2 3300050493 Bacteria 10145
245 nmdc:mga0k408_27803_c1 3300050493 Bacteria 3213
246 nmdc:mga05p37_13019_c1 3300050507 Bacteria 9953
247 nmdc:mga05p37_6019_c2 3300050507 Bacteria 7544
248 nmdc:mga09592_19798_c1 3300050508 Bacteria 5528
249 nmdc:mga09592_98724_c1 3300050508 Bacteria 2500
250 nmdc:mga0qj67_63888_c1 3300050509 Unclassified 2927
251 nmdc:mga0qj67_9664_c1 3300050509 Bacteria 7188
252 nmdc:mga0qj67_9984_c1 3300050509 Bacteria 7081
253 nmdc:mga0n895_27312_c1 3300050512 Bacteria 5420
254 nmdc:mga0n895_27542_c1 3300050512 Bacteria 5400
255 nmdc:mga0a205_2107_c1 3300050515 Bacteria 17442
256 Ga0500651_0000369 3300053093 Bacteria 24710
257 Ga0500618_000020 3300053125 Bacteria 161356

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046507 Ga0495606_0094552 Ga0495606_0094552_462_1796 443
2 3300048915 Ga0496112_0002330 Ga0496112_0002330_27_1538 499
3 3300005290 Ga0065712_10102361 Ga0065712_101023611 503
4 3300050508 nmdc:mga09592_98724_c1 nmdc:mga09592_98724_c1_162_1790 503
5 3300005616 Ga0068852_100027643 Ga0068852_1000276432 516
6 3300026142 Ga0207698_10016883 Ga0207698_100168832 516
7 3300006852 Ga0075433_10002680 Ga0075433_1000268010 525
8 3300006871 Ga0075434_100002004 Ga0075434_10000200411 525
9 3300032004 Ga0307414_10000038 Ga0307414_1000003828 529
10 3300031238 Ga0265332_10004342 Ga0265332_100043425 530
11 3300031711 Ga0265314_10007192 Ga0265314_100071925 530
12 3300013308 Ga0157375_10018256 Ga0157375_100182561 536
13 3300025917 Ga0207660_10021255 Ga0207660_100212554 536
14 3300046683 Ga0495658_0031017 Ga0495658_0031017_448_2238 537
15 3300050512 nmdc:mga0n895_27312_c1 nmdc:mga0n895_27312_c1_3713_5335 538
16 3300017792 Ga0163161_10002182 Ga0163161_100021829 542
17 3300031911 Ga0307412_10027561 Ga0307412_100275611 542
18 3300032126 Ga0307415_100023177 Ga0307415_1000231775 542
19 3300035172 Ga0373955_0043374 Ga0373955_0043374_621_2345 542
20 3300035724 Ga0373933_0011596 Ga0373933_0011596_2251_3975 542
21 3300036401 Ga0373937_0000174 Ga0373937_0000174_26727_28451 542
22 3300042876 Ga0451577_0110165 Ga0451577_0110165_159_1901 542
23 3300044712 Ga0453684_0155092 Ga0453684_0155092_906_2648 542
24 3300046516 Ga0495628_0052498 Ga0495628_0052498_539_2263 542
25 3300046543 Ga0495645_0000197 Ga0495645_0000197_35995_37719 542
26 3300046679 Ga0495623_0022598 Ga0495623_0022598_350_2074 542
27 3300046809 Ga0495600_0091805 Ga0495600_0091805_130_1854 542
28 3300013104 Ga0157370_10001245 Ga0157370_1000124511 543
29 3300031824 Ga0307413_10035449 Ga0307413_100354492 544
30 3300031852 Ga0307410_10022026 Ga0307410_100220262 544
31 3300035692 Ga0373935_0019764 Ga0373935_0019764_1163_2854 544
32 3300037068 Ga0373925_0024666 Ga0373925_0024666_1494_3185 544
33 3300046459 Ga0495629_0009964 Ga0495629_0009964_290_2026 544
34 3300046535 Ga0495586_0026882 Ga0495586_0026882_208_1899 544
35 3300006846 Ga0075430_100115832 Ga0075430_1001158322 545
36 3300049581 Ga0501047_0040898 Ga0501047_0040898_1958_3697 545
37 3300049823 Ga0501044_0013217 Ga0501044_0013217_783_2522 545
38 3300050508 nmdc:mga09592_19798_c1 nmdc:mga09592_19798_c1_3268_5001 545
39 3300050509 nmdc:mga0qj67_9984_c1 nmdc:mga0qj67_9984_c1_5075_6808 545
40 3300050493 nmdc:mga0k408_27803_c1 nmdc:mga0k408_27803_c1_498_2225 546
41 3300005329 Ga0070683_100075174 Ga0070683_1000751742 547
42 3300005459 Ga0068867_100054686 Ga0068867_1000546862 547
43 3300013104 Ga0157370_10040047 Ga0157370_100400472 547
44 3300013105 Ga0157369_10067207 Ga0157369_100672072 547
45 3300025913 Ga0207695_10002459 Ga0207695_1000245914 547
46 3300013307 Ga0157372_10030374 Ga0157372_100303742 548
47 3300009093 Ga0105240_10085977 Ga0105240_100859773 549
48 3300009545 Ga0105237_10001887 Ga0105237_100018875 550
49 3300010375 Ga0105239_10000006 Ga0105239_10000006232 550
50 3300013100 Ga0157373_10013992 Ga0157373_100139923 550
51 3300013105 Ga0157369_10000450 Ga0157369_1000045045 550
52 3300015262 Ga0182007_10000016 Ga0182007_10000016146 550
53 3300015682 Ga0183373_1011 Ga0183373_1011112 551
54 3300006846 Ga0075430_100013199 Ga0075430_1000131996 552
55 3300009177 Ga0105248_10152027 Ga0105248_101520272 553
56 3300013102 Ga0157371_10002361 Ga0157371_1000236111 553
57 3300013104 Ga0157370_10005098 Ga0157370_100050983 553
58 3300015261 Ga0182006_1000064 Ga0182006_100006427 553
59 3300045976 Ga0466967_0029026 Ga0466967_0029026_2774_4531 553
60 3300005288 Ga0065714_10078158 Ga0065714_100781582 554
61 3300009147 Ga0114129_10008923 Ga0114129_100089235 554
62 3300050507 nmdc:mga05p37_6019_c2 nmdc:mga05p37_6019_c2_2447_4174 554
63 3300009094 Ga0111539_10144474 Ga0111539_101444742 555
64 3300005445 Ga0070708_100000030 Ga0070708_10000003060 556
65 3300032004 Ga0307414_10040578 Ga0307414_100405782 556
66 3300039437 Ga0436365_1070036 Ga0436365_1070036_1238_2959 556
67 3300050509 nmdc:mga0qj67_9664_c1 nmdc:mga0qj67_9664_c1_1100_2800 556
68 3300006846 Ga0075430_100003032 Ga0075430_1000030322 557
69 3300006847 Ga0075431_100021022 Ga0075431_1000210227 557
70 3300045976 Ga0466967_0062653 Ga0466967_0062653_188_1936 557
71 3300047320 Ga0495672_0003808 Ga0495672_0003808_2424_4133 557
72 3300050509 nmdc:mga0qj67_63888_c1 nmdc:mga0qj67_63888_c1_341_2077 557
73 3300005329 Ga0070683_100000310 Ga0070683_10000031023 558
74 3300005535 Ga0070684_100119087 Ga0070684_1001190872 558
75 3300044658 Ga0466972_0000104 Ga0466972_0000104_18112_19830 559
76 3300046526 Ga0495666_0034236 Ga0495666_0034236_144_1928 559
77 3300049703 Ga0501219_000516 Ga0501219_000516_1260_2951 559
78 3300050005 Ga0501284_00005 Ga0501284_00005_40620_42311 559
79 3300005329 Ga0070683_100047981 Ga0070683_1000479812 560
80 3300005355 Ga0070671_100070848 Ga0070671_1000708482 560
81 3300005457 Ga0070662_100002475 Ga0070662_1000024752 560
82 3300005539 Ga0068853_100146965 Ga0068853_1001469651 560
83 3300005563 Ga0068855_100019023 Ga0068855_1000190234 560
84 3300005615 Ga0070702_100032205 Ga0070702_1000322052 560
85 3300009177 Ga0105248_10004088 Ga0105248_100040885 560
86 3300009545 Ga0105237_10033703 Ga0105237_100337032 560
87 3300013102 Ga0157371_10023907 Ga0157371_100239072 560
88 3300014745 Ga0157377_10004662 Ga0157377_100046624 560
89 3300025913 Ga0207695_10090945 Ga0207695_100909453 560
90 3300025949 Ga0207667_10030844 Ga0207667_100308446 560
91 3300026116 Ga0207674_10140970 Ga0207674_101409702 560
92 3300048912 Ga0496109_0112706 Ga0496109_0112706_187_1977 560
93 3300005834 Ga0068851_10018961 Ga0068851_100189613 561
94 3300005841 Ga0068863_100013615 Ga0068863_1000136156 561
95 3300031824 Ga0307413_10006491 Ga0307413_100064911 561
96 3300005331 Ga0070670_100026693 Ga0070670_1000266932 562
97 3300005334 Ga0068869_100094619 Ga0068869_1000946192 562
98 3300005336 Ga0070680_100000114 Ga0070680_10000011423 562
99 3300005459 Ga0068867_100074535 Ga0068867_1000745352 562
100 3300005530 Ga0070679_100078739 Ga0070679_1000787393 562
101 3300005535 Ga0070684_100033727 Ga0070684_1000337272 562
102 3300005543 Ga0070672_100011309 Ga0070672_1000113097 562
103 3300005564 Ga0070664_100023277 Ga0070664_1000232772 562
104 3300009098 Ga0105245_10045631 Ga0105245_100456314 562
105 3300009176 Ga0105242_10042924 Ga0105242_100429242 562
106 3300013307 Ga0157372_10008368 Ga0157372_100083682 562
107 3300025917 Ga0207660_10001735 Ga0207660_1000173515 562
108 3300025923 Ga0207681_10035664 Ga0207681_100356642 562
109 3300025925 Ga0207650_10009142 Ga0207650_100091427 562
110 3300025934 Ga0207686_10010529 Ga0207686_100105293 562
111 3300025940 Ga0207691_10005004 Ga0207691_100050046 562
112 3300025944 Ga0207661_10029130 Ga0207661_100291301 562
113 3300025945 Ga0207679_10061516 Ga0207679_100615161 562
114 3300028380 Ga0268265_10119583 Ga0268265_101195832 562
115 3300048911 Ga0496108_0123278 Ga0496108_0123278_52_1776 562
116 iso_pu_bacteria 2977232053 2977234419 562
117 3300005329 Ga0070683_100003446 Ga0070683_10000344611 563
118 3300005330 Ga0070690_100006313 Ga0070690_1000063132 563
119 3300005334 Ga0068869_100037720 Ga0068869_1000377203 563
120 3300005339 Ga0070660_100011042 Ga0070660_1000110425 563
121 3300005344 Ga0070661_100003223 Ga0070661_1000032232 563
122 3300005458 Ga0070681_10011346 Ga0070681_100113466 563
123 3300005535 Ga0070684_100199871 Ga0070684_1001998711 563
124 3300005563 Ga0068855_100019619 Ga0068855_1000196193 563
125 3300005564 Ga0070664_100044872 Ga0070664_1000448722 563
126 3300005614 Ga0068856_100005278 Ga0068856_10000527812 563
127 3300005616 Ga0068852_100014920 Ga0068852_1000149202 563
128 3300005841 Ga0068863_100036502 Ga0068863_1000365023 563
129 3300005843 Ga0068860_100031493 Ga0068860_1000314932 563
130 3300006237 Ga0097621_100017227 Ga0097621_1000172272 563
131 3300025912 Ga0207707_10036233 Ga0207707_100362332 563
132 3300025917 Ga0207660_10018754 Ga0207660_100187544 563
133 3300025933 Ga0207706_10004742 Ga0207706_100047427 563
134 3300026116 Ga0207674_10000727 Ga0207674_1000072726 563
135 3300028379 Ga0268266_10069669 Ga0268266_100696691 563
136 3300049823 Ga0501044_0066218 Ga0501044_0066218_1074_2798 563
137 iso_pu_bacteria 2738541278 2738726041 563
138 3300005328 Ga0070676_10000673 Ga0070676_100006734 564
139 3300005338 Ga0068868_100009969 Ga0068868_1000099692 564
140 3300005340 Ga0070689_100066280 Ga0070689_1000662801 564
141 3300005563 Ga0068855_100034902 Ga0068855_1000349026 564
142 3300005578 Ga0068854_100034109 Ga0068854_1000341093 564
143 3300005719 Ga0068861_100005197 Ga0068861_1000051978 564
144 3300006844 Ga0075428_100007897 Ga0075428_1000078973 564
145 3300006847 Ga0075431_100048891 Ga0075431_1000488913 564
146 3300006881 Ga0068865_100012922 Ga0068865_1000129221 564
147 3300009098 Ga0105245_10032746 Ga0105245_100327462 564
148 3300009147 Ga0114129_10100391 Ga0114129_101003914 564
149 3300009553 Ga0105249_10040382 Ga0105249_100403822 564
150 3300013306 Ga0163162_10014857 Ga0163162_100148578 564
151 3300014745 Ga0157377_10000713 Ga0157377_100007134 564
152 3300014968 Ga0157379_10006466 Ga0157379_100064666 564
153 3300017792 Ga0163161_10020435 Ga0163161_100204351 564
154 3300025907 Ga0207645_10000270 Ga0207645_1000027028 564
155 3300025918 Ga0207662_10008720 Ga0207662_100087202 564
156 3300025923 Ga0207681_10003636 Ga0207681_100036366 564
157 3300025926 Ga0207659_10052585 Ga0207659_100525852 564
158 3300025933 Ga0207706_10000834 Ga0207706_1000083421 564
159 3300025940 Ga0207691_10001241 Ga0207691_100012417 564
160 3300025961 Ga0207712_10005360 Ga0207712_100053606 564
161 3300026116 Ga0207674_10002065 Ga0207674_1000206514 564
162 3300026118 Ga0207675_100011471 Ga0207675_1000114717 564
163 3300045051 Ga0451576_0049236 Ga0451576_0049236_124_1917 564
164 3300046499 Ga0495594_0007127 Ga0495594_0007127_2929_4689 564
165 3300049571 Ga0501034_0117471 Ga0501034_0117471_704_2425 564
166 3300049571 Ga0501034_0190805 Ga0501034_0190805_22_1749 564
167 3300049823 Ga0501044_0088684 Ga0501044_0088684_18_1745 564
168 3300050507 nmdc:mga05p37_13019_c1 nmdc:mga05p37_13019_c1_985_2760 564
169 3300050512 nmdc:mga0n895_27542_c1 nmdc:mga0n895_27542_c1_290_2065 564
170 3300050515 nmdc:mga0a205_2107_c1 nmdc:mga0a205_2107_c1_12945_14720 564
171 3300005354 Ga0070675_100087067 Ga0070675_1000870672 565
172 3300005439 Ga0070711_100009394 Ga0070711_1000093942 565
173 3300005458 Ga0070681_10000913 Ga0070681_100009138 565
174 3300005530 Ga0070679_100015790 Ga0070679_1000157904 565
175 3300013297 Ga0157378_10028088 Ga0157378_100280884 565
176 3300013307 Ga0157372_10008602 Ga0157372_100086022 565
177 3300025916 Ga0207663_10011887 Ga0207663_100118875 565
178 3300025926 Ga0207659_10121069 Ga0207659_101210692 565
179 3300046535 Ga0495586_0030540 Ga0495586_0030540_387_2177 565
180 3300049823 Ga0501044_0005207 Ga0501044_0005207_5969_7747 565
181 iso_pu_bacteria 2738541284 2738764097 565
182 iso_pu_bacteria 2775506987 2776616478 565
183 3300005331 Ga0070670_100003918 Ga0070670_1000039184 566
184 3300005344 Ga0070661_100005071 Ga0070661_1000050719 566
185 3300005353 Ga0070669_100001836 Ga0070669_10000183610 566
186 3300005355 Ga0070671_100012035 Ga0070671_1000120355 566
187 3300005366 Ga0070659_100018930 Ga0070659_1000189305 566
188 3300005458 Ga0070681_10000280 Ga0070681_1000028010 566
189 3300005564 Ga0070664_100000956 Ga0070664_1000009562 566
190 3300005564 Ga0070664_100035626 Ga0070664_1000356262 566
191 3300005577 Ga0068857_100059138 Ga0068857_1000591382 566
192 3300005618 Ga0068864_100076596 Ga0068864_1000765962 566
193 3300005719 Ga0068861_100011012 Ga0068861_1000110124 566
194 3300005844 Ga0068862_100001547 Ga0068862_1000015478 566
195 3300006846 Ga0075430_100039171 Ga0075430_1000391713 566
196 3300009553 Ga0105249_10000703 Ga0105249_1000070316 566
197 3300013105 Ga0157369_10064672 Ga0157369_100646723 566
198 3300013306 Ga0163162_10083671 Ga0163162_100836713 566
199 3300013308 Ga0157375_10006875 Ga0157375_100068751 566
200 3300014325 Ga0163163_10002398 Ga0163163_100023983 566
201 3300025246 Ga0209646_1000947 Ga0209646_10009474 566
202 3300025908 Ga0207643_10008007 Ga0207643_100080076 566
203 3300025912 Ga0207707_10002450 Ga0207707_100024505 566
204 3300025923 Ga0207681_10005360 Ga0207681_100053606 566
205 3300025938 Ga0207704_10024739 Ga0207704_100247392 566
206 3300025960 Ga0207651_10065479 Ga0207651_100654792 566
207 3300025961 Ga0207712_10000842 Ga0207712_100008428 566
208 3300025972 Ga0207668_10016661 Ga0207668_100166614 566
209 3300026089 Ga0207648_10040369 Ga0207648_100403694 566
210 3300026095 Ga0207676_10001504 Ga0207676_1000150410 566
211 3300026116 Ga0207674_10001559 Ga0207674_1000155920 566
212 3300026116 Ga0207674_10076581 Ga0207674_100765813 566
213 3300026118 Ga0207675_100004100 Ga0207675_1000041004 566
214 3300028380 Ga0268265_10001874 Ga0268265_1000187411 566
215 3300031548 Ga0307408_100002637 Ga0307408_10000263710 566
216 3300045051 Ga0451576_0070025 Ga0451576_0070025_1153_2934 566
217 3300005329 Ga0070683_100005872 Ga0070683_1000058728 567
218 3300005458 Ga0070681_10006462 Ga0070681_100064626 567
219 3300005530 Ga0070679_100000928 Ga0070679_1000009287 567
220 3300005530 Ga0070679_100009861 Ga0070679_1000098613 567
221 3300010375 Ga0105239_10000936 Ga0105239_1000093613 567
222 3300025921 Ga0207652_10019757 Ga0207652_100197572 567
223 3300028794 Ga0307515_10004941 Ga0307515_1000494118 567
224 3300028794 Ga0307515_10023678 Ga0307515_100236783 567
225 3300031456 Ga0307513_10145548 Ga0307513_101455482 567
226 3300042007 Ga0439449_0017964 Ga0439449_0017964_878_2605 567
227 3300044656 Ga0466969_0000152 Ga0466969_0000152_23153_24943 567
228 3300044684 Ga0466966_0000567 Ga0466966_0000567_9380_11170 567
229 3300044842 Ga0466957_0000387 Ga0466957_0000387_3181_4899 567
230 3300045049 Ga0466959_0000016 Ga0466959_0000016_29133_30923 567
231 3300046492 Ga0495585_0002707 Ga0495585_0002707_6977_8698 567
232 3300046524 Ga0495648_0005671 Ga0495648_0005671_7213_8934 567
233 3300046558 Ga0495633_0000072 Ga0495633_0000072_8100_9821 567
234 3300046616 Ga0495668_0000041 Ga0495668_0000041_140764_142485 567
235 3300046660 Ga0495625_0000983 Ga0495625_0000983_9943_11664 567
236 3300048918 Ga0496115_0058898 Ga0496115_0058898_533_2296 567
237 3300049579 Ga0501043_0050811 Ga0501043_0050811_762_2501 567
238 3300006195 Ga0075366_10002102 Ga0075366_100021024 568
239 3300009545 Ga0105237_10025235 Ga0105237_100252352 568
240 3300013306 Ga0163162_10057612 Ga0163162_100576122 568
241 3300021384 Ga0213876_10004071 Ga0213876_100040712 568
242 3300025250 Ga0209026_1000957 Ga0209026_10009574 568
243 3300025272 Ga0209455_1006126 Ga0209455_10061262 568
244 3300025913 Ga0207695_10168483 Ga0207695_101684831 568
245 3300028794 Ga0307515_10000003 Ga0307515_10000003612 568
246 3300031507 Ga0307509_10038286 Ga0307509_100382862 568
247 3300039437 Ga0436365_0090513 Ga0436365_0090513_5875_7605 568
248 3300046660 Ga0495625_0005737 Ga0495625_0005737_1082_2806 568
249 3300050493 nmdc:mga0k408_124_c2 nmdc:mga0k408_124_c2_6424_8148 568
250 3300053125 Ga0500618_000020 Ga0500618_000020_43536_45260 568
251 2162886007 SwRhRL2b_contig_2628285 SwRhRL2b_0472.00005930 569
252 3300005288 Ga0065714_10002327 Ga0065714_1000232728 569
253 3300005288 Ga0065714_10002519 Ga0065714_100025197 569
254 3300005289 Ga0065704_10000253 Ga0065704_1000025314 569
255 3300013100 Ga0157373_10000099 Ga0157373_1000009950 569
256 3300013102 Ga0157371_10000861 Ga0157371_1000086114 569
257 3300013102 Ga0157371_10001605 Ga0157371_100016058 569
258 3300014497 Ga0182008_10000021 Ga0182008_10000021135 569
259 3300031911 Ga0307412_10000091 Ga0307412_1000009119 569
260 3300032004 Ga0307414_10003313 Ga0307414_100033135 569
261 3300053093 Ga0500651_0000369 Ga0500651_0000369_14577_16286 569

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04389

Peptidase_M28

Peptidase family M28

318

383

0.87

PF04389

Peptidase_M28

Peptidase family M28

425

517

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ica-assembly1.cif.gz_A the crystal structure of legionella pneumophila lapa aminopeptidase 0.7999 250 473
6ica-assembly2.cif.gz_B the crystal structure of legionella pneumophila lapa aminopeptidase 0.7965 250 473
6ica-assembly3.cif.gz_C the crystal structure of legionella pneumophila lapa aminopeptidase 0.7944 250 473
6esl-assembly1.cif.gz_B crystal structure of the legionella pneumoppila lapa 0.7834 250 473
6esl-assembly1.cif.gz_A crystal structure of the legionella pneumoppila lapa 0.7804 250 473
ID Description Score Start End Superfamily
3k9tA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.813 246 473 3.40.630.10
5ib9A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8037 25 471 3.40.630.10
af_Q5AA00_122_414_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7666 250 475 3.40.630.10
1xjoA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.756 248 473 3.40.630.10
1cp6A00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7543 250 469 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A519X8D2-F1-model_v4 M28 family peptidase 0.9892 304 569
AF-A0A4Q3B1M2-F1-model_v4 deleted 0.9885 78 569
AF-A0A4Q3AZN0-F1-model_v4 deleted 0.9867 85 508
AF-A0A4Q3B1M2-F1-model_v4 deleted 0.9865 78 569
AF-A0A519X8D2-F1-model_v4 M28 family peptidase 0.9855 304 569

Feature Viewer

pLDDT pTM Quality
93.76 0.92 High
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Predicted Structure (AlphaFold2)

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