F369752

General Info

Members Datasets Scaffolds Average Seq Length
260 196 520 393

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0113081|Ga0451577_0113081_939_2141
Length 400
Sequence MNASTAQREVSVPLGEDYPEIRDSVRRICADFPGAYWRDLDAREAYPAEFVKALTEAGYLAALIPEEYGGAGLPLRAAGVVLEECHAAGCYAAAAHAQMYTMGSLLRHGSPEQKARYLPKIASGELRLQAFGVTEPTTGTDTTKLKTRAQFVKSGDGDHYVVNGQKVWTSRALHSDLMLLLVRTTPFDQVTKKTEGLSVFLVDIRDSVGKGMEIRPLKAMINHSATEVFIENLRVPAENLIGGEGKGFRCILDGMNAERILVSHESIGDARWFTRTASKYATERIVFDRPIGKNQGVQFPIARAYAEMQAADMMLRKAAALFQAGLPCGEDANLAKLLSSDAAWHAAEACMQTHGGFGYAREYDVERRWREARIQQIAPVSTNLILAYIGEHVLGMPRSY

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
97 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
98 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
99 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
100 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
101 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
102 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
103 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
104 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
109 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
110 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
114 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
115 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
116 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
117 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
127 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
128 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
171 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
177 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
181 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
182 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
183 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
184 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
185 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
186 2855730933 Achromobacter sp. HZ28 Isolate Nodule
187 2855767633 Achromobacter sp. HZ34 Isolate Nodule
188 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
189 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
190 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
191 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
192 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
193 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
194 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
195 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
196 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.85
Metatranscriptomes 0
Isolates 6.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.23
Nodule 3.08
Rhizoplane 3.08
Rhizosphere 83.46
Stem 0
Stem Tuber 0
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0113081 3300042876 Bacteria 2430
2 JGI25151J46595_10000308 3300003187 Bacteria 53537
3 Ga0065715_10118420 3300005293 Bacteria 2308
4 Ga0070658_10005460 3300005327 Bacteria 10309
5 Ga0070658_10029820 3300005327 Bacteria 4382
6 Ga0070676_10038113 3300005328 Bacteria 2775
7 Ga0070676_10042866 3300005328 Bacteria 2629
8 Ga0070683_100001483 3300005329 Bacteria 18089
9 Ga0070670_100008618 3300005331 Bacteria 8704
10 Ga0070677_10013370 3300005333 Bacteria 2869
11 Ga0068869_100111443 3300005334 Bacteria 2082
12 Ga0070666_10010879 3300005335 Bacteria 5701
13 Ga0070680_100087648 3300005336 Bacteria 2574
14 Ga0070680_100129904 3300005336 Bacteria 2107
15 Ga0068868_100003899 3300005338 Bacteria 10411
16 Ga0070661_100010593 3300005344 Bacteria 6413
17 Ga0070692_10110042 3300005345 Bacteria 1522
18 Ga0070668_100008022 3300005347 Bacteria 7844
19 Ga0070669_100159213 3300005353 Bacteria 1753
20 Ga0070675_100024931 3300005354 Bacteria 4793
21 Ga0070675_100048004 3300005354 Bacteria 3499
22 Ga0070671_100051789 3300005355 Bacteria 3414
23 Ga0070667_100068619 3300005367 Bacteria 3017
24 Ga0070713_100036473 3300005436 Bacteria 3967
25 Ga0070710_10063299 3300005437 Bacteria 2113
26 Ga0070700_100044852 3300005441 Bacteria 2725
27 Ga0070678_100003322 3300005456 Bacteria 8950
28 Ga0070662_100001374 3300005457 Bacteria 14971
29 Ga0070681_10002673 3300005458 Bacteria 16371
30 Ga0070681_10003510 3300005458 Bacteria 14689
31 Ga0068867_100021368 3300005459 Bacteria 4618
32 Ga0070706_100020741 3300005467 Bacteria 6052
33 Ga0070707_100017727 3300005468 Bacteria 6695
34 Ga0070679_100037419 3300005530 Bacteria 4820
35 Ga0070679_100041668 3300005530 Bacteria 4570
36 Ga0070679_100062628 3300005530 Bacteria 3709
37 Ga0070697_100035871 3300005536 Unclassified 4002
38 Ga0070672_100003514 3300005543 Bacteria 10158
39 Ga0070665_100000962 3300005548 Bacteria 36636
40 Ga0070665_100119267 3300005548 Bacteria 2640
41 Ga0070664_100010086 3300005564 Bacteria 7658
42 Ga0068854_100019123 3300005578 Bacteria 4611
43 Ga0068856_100118445 3300005614 Bacteria 2649
44 Ga0070702_100211398 3300005615 Bacteria 1291
45 Ga0068852_100000381 3300005616 Bacteria 29923
46 Ga0068852_100004398 3300005616 Bacteria 9959
47 Ga0068864_100017618 3300005618 Bacteria 5955
48 Ga0068866_10042823 3300005718 Bacteria 2256
49 Ga0068861_100020395 3300005719 Bacteria 4748
50 Ga0068862_100001285 3300005844 Bacteria 23522
51 Ga0068862_100093721 3300005844 Bacteria 2619
52 Ga0081540_1015933 3300005983 Bacteria 4736
53 Ga0070717_10061907 3300006028 Bacteria 3102
54 Ga0075365_10106819 3300006038 Bacteria 1921
55 Ga0070712_100030071 3300006175 Bacteria 3646
56 Ga0070712_100064366 3300006175 Bacteria 2600
57 Ga0075366_10009532 3300006195 Bacteria 5423
58 Ga0097621_100003563 3300006237 Bacteria 10760
59 Ga0099795_10074811 3300007788 Bacteria 1285
60 Ga0105240_10039003 3300009093 Bacteria 6087
61 Ga0105240_10122086 3300009093 Bacteria 3136
62 Ga0111539_10149081 3300009094 Bacteria 2738
63 Ga0105238_10090462 3300009551 Bacteria 3048
64 Ga0105239_10053008 3300010375 Bacteria 4449
65 Ga0157370_10012658 3300013104 Bacteria 8737
66 Ga0157374_10051864 3300013296 Bacteria 3818
67 Ga0163162_10012580 3300013306 Bacteria 8264
68 Ga0157375_10006479 3300013308 Bacteria 10199
69 Ga0209130_1012618 3300025284 Bacteria 2201
70 Ga0209025_1000028 3300025294 Bacteria 490678
71 Ga0207682_10018494 3300025893 Bacteria 2725
72 Ga0207680_10007256 3300025903 Bacteria 5391
73 Ga0207645_10046418 3300025907 Bacteria 2775
74 Ga0207645_10067245 3300025907 Bacteria 2290
75 Ga0207705_10015429 3300025909 Bacteria 5482
76 Ga0207684_10178942 3300025910 Bacteria 1828
77 Ga0207707_10028915 3300025912 Bacteria 4844
78 Ga0207707_10062510 3300025912 Bacteria 3240
79 Ga0207695_10074654 3300025913 Bacteria 3452
80 Ga0207693_10012610 3300025915 Bacteria 6829
81 Ga0207663_10033902 3300025916 Bacteria 3046
82 Ga0207660_10044575 3300025917 Bacteria 3121
83 Ga0207649_10003385 3300025920 Bacteria 8723
84 Ga0207652_10009135 3300025921 Bacteria 7980
85 Ga0207652_10176931 3300025921 Bacteria 1916
86 Ga0207681_10133668 3300025923 Bacteria 1837
87 Ga0207694_10000516 3300025924 Bacteria 35028
88 Ga0207650_10054859 3300025925 Bacteria 2957
89 Ga0207659_10064905 3300025926 Bacteria 2644
90 Ga0207700_10042217 3300025928 Bacteria 3342
91 Ga0207700_10138379 3300025928 Bacteria 1997
92 Ga0207644_10209502 3300025931 Bacteria 1540
93 Ga0207669_10014225 3300025937 Bacteria 3983
94 Ga0207669_10076954 3300025937 Bacteria 2120
95 Ga0207691_10006902 3300025940 Bacteria 10951
96 Ga0207691_10022511 3300025940 Bacteria 5942
97 Ga0207689_10302346 3300025942 Bacteria 1326
98 Ga0207679_10018963 3300025945 Bacteria 4616
99 Ga0207667_10149888 3300025949 Bacteria 2401
100 Ga0207712_10025097 3300025961 Bacteria 3956
101 Ga0207712_10195719 3300025961 Bacteria 1599
102 Ga0207640_10031029 3300025981 Bacteria 3298
103 Ga0207677_10004634 3300026023 Bacteria 7400
104 Ga0207678_10042697 3300026067 Bacteria 3927
105 Ga0207708_10123827 3300026075 Bacteria 2016
106 Ga0207648_10088754 3300026089 Bacteria 2700
107 Ga0207675_100002330 3300026118 Bacteria 18821
108 Ga0207683_10001605 3300026121 Bacteria 20325
109 Ga0207698_10020821 3300026142 Bacteria 4522
110 Ga0268266_10006977 3300028379 Bacteria 10269
111 Ga0268266_10015944 3300028379 Bacteria 6429
112 Ga0268266_10313170 3300028379 Bacteria 1467
113 Ga0268265_10001089 3300028380 Bacteria 24176
114 Ga0265319_1010377 3300028563 Bacteria 3891
115 Ga0265319_1011282 3300028563 Bacteria 3669
116 Ga0265318_10000362 3300028577 Bacteria 35865
117 Ga0265318_10003634 3300028577 Bacteria 7694
118 Ga0265338_10050975 3300028800 Bacteria 3734
119 Ga0265324_10036099 3300029957 Bacteria 1719
120 Ga0265330_10005228 3300031235 Bacteria 6483
121 Ga0265330_10024074 3300031235 Bacteria 2762
122 Ga0265332_10012924 3300031238 Bacteria 3701
123 Ga0265328_10029880 3300031239 Bacteria 2032
124 Ga0265320_10047628 3300031240 Bacteria 2096
125 Ga0265325_10020952 3300031241 Bacteria 3597
126 Ga0265340_10001611 3300031247 Bacteria 12961
127 Ga0265339_10004296 3300031249 Bacteria 9743
128 Ga0265339_10034609 3300031249 Bacteria 2837
129 Ga0265331_10013644 3300031250 Bacteria 4361
130 Ga0265331_10016572 3300031250 Bacteria 3865
131 Ga0265331_10021393 3300031250 Bacteria 3310
132 Ga0265331_10050227 3300031250 Bacteria 2001
133 Ga0265316_10033437 3300031344 Bacteria 4188
134 Ga0265316_10105687 3300031344 Bacteria 2136
135 Ga0307408_100252191 3300031548 Bacteria 1456
136 Ga0265314_10007083 3300031711 Bacteria 9783
137 Ga0265314_10038945 3300031711 Bacteria 3430
138 Ga0265342_10000031 3300031712 Bacteria 152577
139 Ga0265342_10000096 3300031712 Bacteria 97237
140 Ga0316576_10075408 3300031727 Bacteria 2495
141 Ga0307407_10115297 3300031903 Bacteria 1694
142 Ga0307412_10094080 3300031911 Bacteria 2104
143 Ga0307414_10022466 3300032004 Bacteria 3979
144 Ga0307414_10031260 3300032004 Bacteria 3490
145 Ga0307414_10066223 3300032004 Bacteria 2581
146 Ga0316583_10027400 3300032133 Bacteria 2034
147 Ga0373934_0017628 3300035086 Bacteria 2728
148 Ga0373954_0004121 3300035118 Bacteria 6228
149 Ga0373955_0038904 3300035172 Bacteria 2536
150 Ga0373931_0140836 3300035691 Bacteria 1397
151 Ga0373933_0029166 3300035724 Bacteria 3188
152 Ga0373937_0026073 3300036401 Bacteria 5282
153 Ga0373937_0090314 3300036401 Bacteria 2836
154 Ga0373925_0064466 3300037068 Bacteria 2758
155 Ga0395899_0014174 3300037312 Bacteria 6082
156 Ga0395900_0043859 3300037418 Bacteria 4609
157 Ga0395900_0098241 3300037418 Bacteria 3008
158 Ga0395905_0000237 3300037471 Bacteria 83220
159 Ga0395905_0061164 3300037471 Bacteria 3522
160 Ga0436364_0007340 3300037853 Bacteria 9184
161 Ga0436364_0464725 3300037853 Bacteria 56396
162 Ga0436364_1226977 3300037853 Bacteria 15195
163 Ga0436365_0522565 3300039437 Bacteria 7775
164 Ga0436363_0354150 3300039450 Bacteria 3639
165 Ga0436363_0699116 3300039450 Bacteria 17143
166 Ga0436363_0944178 3300039450 Bacteria 3375
167 Ga0451577_0100636 3300042876 Bacteria 2582
168 Ga0466960_0095672 3300044901 Bacteria 1521
169 Ga0495598_0028899 3300046537 Bacteria 1541
170 Ga0495672_0014039 3300047320 Bacteria 5502
171 Ga0495680_0114198 3300047322 Bacteria 1999
172 Ga0495684_0229476 3300047471 Bacteria 1358
173 Ga0496100_0028711 3300048903 Bacteria 3434
174 Ga0496104_0008823 3300048907 Bacteria 8964
175 Ga0496105_0007229 3300048908 Bacteria 8574
176 Ga0496108_0000127 3300048911 Bacteria 75144
177 Ga0496108_0120165 3300048911 Bacteria 2253
178 Ga0496109_0041922 3300048912 Bacteria 4145
179 Ga0496110_0014392 3300048913 Bacteria 6568
180 Ga0496111_0054475 3300048914 Bacteria 2891
181 Ga0496121_0000225 3300048924 Bacteria 122351
182 Ga0496125_0001861 3300048928 Bacteria 29014
183 Ga0496126_0060362 3300048929 Bacteria 3411
184 Ga0496126_0171074 3300048929 Bacteria 1851
185 Ga0501033_0028380 3300049570 Bacteria 4204
186 Ga0501033_0049293 3300049570 Bacteria 3126
187 Ga0501034_0113392 3300049571 Bacteria 2701
188 Ga0501034_0171558 3300049571 Bacteria 2136
189 Ga0501034_0262684 3300049571 Bacteria 1669
190 Ga0501036_0011685 3300049572 Bacteria 7276
191 Ga0501036_0071973 3300049572 Bacteria 2923
192 Ga0501038_0002671 3300049574 Bacteria 16651
193 Ga0501039_0000827 3300049575 Bacteria 22353
194 Ga0501040_0001398 3300049576 Bacteria 15249
195 Ga0501041_0006556 3300049577 Bacteria 6814
196 Ga0501042_0000181 3300049578 Bacteria 29224
197 Ga0501043_0037651 3300049579 Bacteria 3804
198 Ga0501043_0059500 3300049579 Bacteria 2999
199 Ga0501046_0000720 3300049580 Bacteria 31979
200 Ga0501047_0001064 3300049581 Bacteria 27402
201 Ga0501047_0097821 3300049581 Bacteria 2813
202 Ga0501048_0022225 3300049582 Bacteria 4641
203 Ga0501067_0051151 3300049583 Bacteria 2291
204 Ga0501068_0000675 3300049584 Bacteria 17453
205 Ga0501068_0075472 3300049584 Bacteria 2062
206 Ga0501069_0000979 3300049585 Bacteria 13598
207 Ga0501069_0003328 3300049585 Bacteria 8248
208 Ga0501070_0006232 3300049586 Bacteria 10152
209 Ga0501070_0030332 3300049586 Bacteria 4530
210 Ga0501070_0066576 3300049586 Bacteria 2983
211 Ga0501070_0206532 3300049586 Bacteria 1613
212 Ga0501071_0007662 3300049587 Bacteria 7115
213 Ga0501072_0006836 3300049588 Bacteria 8659
214 Ga0501073_0000919 3300049589 Bacteria 21209
215 Ga0501074_0001293 3300049590 Bacteria 16602
216 Ga0501074_0066440 3300049590 Bacteria 2594
217 Ga0501076_0000813 3300049592 Bacteria 20223
218 Ga0501077_0000176 3300049593 Bacteria 36653
219 Ga0501079_0002582 3300049741 Bacteria 13162
220 Ga0501079_0022370 3300049741 Bacteria 4847
221 Ga0501080_0002144 3300049742 Bacteria 17133
222 Ga0501080_0108714 3300049742 Bacteria 2570
223 Ga0501081_0000842 3300049743 Bacteria 18160
224 Ga0501081_0123510 3300049743 Bacteria 1846
225 Ga0501083_0004143 3300049744 Bacteria 10209
226 Ga0501083_0041452 3300049744 Bacteria 3122
227 Ga0501083_0179854 3300049744 Bacteria 1381
228 Ga0501044_0001154 3300049823 Bacteria 31290
229 Ga0501044_0079195 3300049823 Bacteria 3330
230 Ga0501044_0127787 3300049823 Bacteria 2538
231 Ga0501044_0215865 3300049823 Bacteria 1871
232 Ga0501045_0017727 3300049824 Bacteria 5056
233 Ga0501045_0100752 3300049824 Bacteria 2138
234 nmdc:mga03n38_126481_c1 3300050490 Bacteria 1262
235 nmdc:mga06z11_46649_c1 3300050494 Bacteria 2197
236 nmdc:mga09592_278863_c1 3300050508 Bacteria 1450
237 Ga0495619_0030142 3300053085 Bacteria 3510
238 Ga0500644_0004707 3300053088 Bacteria 3423
239 Ga0500559_0003768 3300053136 Bacteria 7360
240 Ga0500622_0000117 3300053156 Bacteria 82720
241 Ga0500637_0017417 3300053178 Bacteria 3847
242 Ga0501084_0004670 3300054114 Bacteria 11186
243 Ga0501082_0017149 3300060353 Bacteria 6238
244 Ga0530510_0000265 3300061734 Bacteria 33009
245 2513656022 2513237096 Bacteria 8722461
246 2513917064 2513237145 Bacteria 8979722
247 2517895673 2517572143 Bacteria 9484767
248 2835319174 2835312727 Bacteria 7413381
249 2841961840 2841957949 Bacteria 8652217
250 2855733502 2855730933 Bacteria 7047938
251 2855772281 2855767633 Bacteria 7049357
252 2881101370 2881101125 Bacteria 4590519
253 2881417866 2881412998 Bacteria 6492157
254 2894776801 2894772417 Bacteria 5305674
255 2906639908 2906635258 Bacteria 8601019
256 2906662704 2906660503 Bacteria 8595048
257 2929201701 2929199973 Bacteria 7260745
258 2939633458 2939631187 Bacteria 6118131
259 8055916078 8055909800 Bacteria 7278581
260 8056694992 8056689827 Bacteria 6712655
261 Ga0451577_0113081
262 JGI25151J46595_10000308
263 Ga0065715_10118420
264 Ga0070658_10005460
265 Ga0070658_10029820
266 Ga0070676_10038113
267 Ga0070676_10042866
268 Ga0070683_100001483
269 Ga0070670_100008618
270 Ga0070677_10013370
271 Ga0068869_100111443
272 Ga0070666_10010879
273 Ga0070680_100087648
274 Ga0070680_100129904
275 Ga0068868_100003899
276 Ga0070661_100010593
277 Ga0070692_10110042
278 Ga0070668_100008022
279 Ga0070669_100159213
280 Ga0070675_100024931
281 Ga0070675_100048004
282 Ga0070671_100051789
283 Ga0070667_100068619
284 Ga0070713_100036473
285 Ga0070710_10063299
286 Ga0070700_100044852
287 Ga0070678_100003322
288 Ga0070662_100001374
289 Ga0070681_10002673
290 Ga0070681_10003510
291 Ga0068867_100021368
292 Ga0070706_100020741
293 Ga0070707_100017727
294 Ga0070679_100037419
295 Ga0070679_100041668
296 Ga0070679_100062628
297 Ga0070697_100035871
298 Ga0070672_100003514
299 Ga0070665_100000962
300 Ga0070665_100119267
301 Ga0070664_100010086
302 Ga0068854_100019123
303 Ga0068856_100118445
304 Ga0070702_100211398
305 Ga0068852_100000381
306 Ga0068852_100004398
307 Ga0068864_100017618
308 Ga0068866_10042823
309 Ga0068861_100020395
310 Ga0068862_100001285
311 Ga0068862_100093721
312 Ga0081540_1015933
313 Ga0070717_10061907
314 Ga0075365_10106819
315 Ga0070712_100030071
316 Ga0070712_100064366
317 Ga0075366_10009532
318 Ga0097621_100003563
319 Ga0099795_10074811
320 Ga0105240_10039003
321 Ga0105240_10122086
322 Ga0111539_10149081
323 Ga0105238_10090462
324 Ga0105239_10053008
325 Ga0157370_10012658
326 Ga0157374_10051864
327 Ga0163162_10012580
328 Ga0157375_10006479
329 Ga0209130_1012618
330 Ga0209025_1000028
331 Ga0207682_10018494
332 Ga0207680_10007256
333 Ga0207645_10046418
334 Ga0207645_10067245
335 Ga0207705_10015429
336 Ga0207684_10178942
337 Ga0207707_10028915
338 Ga0207707_10062510
339 Ga0207695_10074654
340 Ga0207693_10012610
341 Ga0207663_10033902
342 Ga0207660_10044575
343 Ga0207649_10003385
344 Ga0207652_10009135
345 Ga0207652_10176931
346 Ga0207681_10133668
347 Ga0207694_10000516
348 Ga0207650_10054859
349 Ga0207659_10064905
350 Ga0207700_10042217
351 Ga0207700_10138379
352 Ga0207644_10209502
353 Ga0207669_10014225
354 Ga0207669_10076954
355 Ga0207691_10006902
356 Ga0207691_10022511
357 Ga0207689_10302346
358 Ga0207679_10018963
359 Ga0207667_10149888
360 Ga0207712_10025097
361 Ga0207712_10195719
362 Ga0207640_10031029
363 Ga0207677_10004634
364 Ga0207678_10042697
365 Ga0207708_10123827
366 Ga0207648_10088754
367 Ga0207675_100002330
368 Ga0207683_10001605
369 Ga0207698_10020821
370 Ga0268266_10006977
371 Ga0268266_10015944
372 Ga0268266_10313170
373 Ga0268265_10001089
374 Ga0265319_1010377
375 Ga0265319_1011282
376 Ga0265318_10000362
377 Ga0265318_10003634
378 Ga0265338_10050975
379 Ga0265324_10036099
380 Ga0265330_10005228
381 Ga0265330_10024074
382 Ga0265332_10012924
383 Ga0265328_10029880
384 Ga0265320_10047628
385 Ga0265325_10020952
386 Ga0265340_10001611
387 Ga0265339_10004296
388 Ga0265339_10034609
389 Ga0265331_10013644
390 Ga0265331_10016572
391 Ga0265331_10021393
392 Ga0265331_10050227
393 Ga0265316_10033437
394 Ga0265316_10105687
395 Ga0307408_100252191
396 Ga0265314_10007083
397 Ga0265314_10038945
398 Ga0265342_10000031
399 Ga0265342_10000096
400 Ga0316576_10075408
401 Ga0307407_10115297
402 Ga0307412_10094080
403 Ga0307414_10022466
404 Ga0307414_10031260
405 Ga0307414_10066223
406 Ga0316583_10027400
407 Ga0373934_0017628
408 Ga0373954_0004121
409 Ga0373955_0038904
410 Ga0373931_0140836
411 Ga0373933_0029166
412 Ga0373937_0026073
413 Ga0373937_0090314
414 Ga0373925_0064466
415 Ga0395899_0014174
416 Ga0395900_0043859
417 Ga0395900_0098241
418 Ga0395905_0000237
419 Ga0395905_0061164
420 Ga0436364_0007340
421 Ga0436364_0464725
422 Ga0436364_1226977
423 Ga0436365_0522565
424 Ga0436363_0354150
425 Ga0436363_0699116
426 Ga0436363_0944178
427 Ga0451577_0100636
428 Ga0466960_0095672
429 Ga0495598_0028899
430 Ga0495672_0014039
431 Ga0495680_0114198
432 Ga0495684_0229476
433 Ga0496100_0028711
434 Ga0496104_0008823
435 Ga0496105_0007229
436 Ga0496108_0000127
437 Ga0496108_0120165
438 Ga0496109_0041922
439 Ga0496110_0014392
440 Ga0496111_0054475
441 Ga0496121_0000225
442 Ga0496125_0001861
443 Ga0496126_0060362
444 Ga0496126_0171074
445 Ga0501033_0028380
446 Ga0501033_0049293
447 Ga0501034_0113392
448 Ga0501034_0171558
449 Ga0501034_0262684
450 Ga0501036_0011685
451 Ga0501036_0071973
452 Ga0501038_0002671
453 Ga0501039_0000827
454 Ga0501040_0001398
455 Ga0501041_0006556
456 Ga0501042_0000181
457 Ga0501043_0037651
458 Ga0501043_0059500
459 Ga0501046_0000720
460 Ga0501047_0001064
461 Ga0501047_0097821
462 Ga0501048_0022225
463 Ga0501067_0051151
464 Ga0501068_0000675
465 Ga0501068_0075472
466 Ga0501069_0000979
467 Ga0501069_0003328
468 Ga0501070_0006232
469 Ga0501070_0030332
470 Ga0501070_0066576
471 Ga0501070_0206532
472 Ga0501071_0007662
473 Ga0501072_0006836
474 Ga0501073_0000919
475 Ga0501074_0001293
476 Ga0501074_0066440
477 Ga0501076_0000813
478 Ga0501077_0000176
479 Ga0501079_0002582
480 Ga0501079_0022370
481 Ga0501080_0002144
482 Ga0501080_0108714
483 Ga0501081_0000842
484 Ga0501081_0123510
485 Ga0501083_0004143
486 Ga0501083_0041452
487 Ga0501083_0179854
488 Ga0501044_0001154
489 Ga0501044_0079195
490 Ga0501044_0127787
491 Ga0501044_0215865
492 Ga0501045_0017727
493 Ga0501045_0100752
494 nmdc:mga03n38_126481_c1
495 nmdc:mga06z11_46649_c1
496 nmdc:mga09592_278863_c1
497 Ga0495619_0030142
498 Ga0500644_0004707
499 Ga0500559_0003768
500 Ga0500622_0000117
501 Ga0500637_0017417
502 Ga0501084_0004670
503 Ga0501082_0017149
504 Ga0530510_0000265
505 2513656022
506 2513917064
507 2517895673
508 2835319174
509 2841961840
510 2855733502
511 2855772281
512 2881101370
513 2881417866
514 2894776801
515 2906639908
516 2906662704
517 2929201701
518 2939633458
519 8055916078
520 8056694992

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

245

394

0.95

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

260

378

0.95

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

15

125

0.9

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

130

233

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pfd-assembly1.cif.gz_A crystal structure of an acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to reduced flavin adenine dinucleotide solved by combined iodide ion sad mr 0.9412 19 392
3pfd-assembly4.cif.gz_C crystal structure of an acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to reduced flavin adenine dinucleotide solved by combined iodide ion sad mr 0.9379 20 392
3pfd-assembly1.cif.gz_A crystal structure of an acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to reduced flavin adenine dinucleotide solved by combined iodide ion sad mr 0.9362 19 392
2vig-assembly1.cif.gz_B crystal structure of human short-chain acyl coa dehydrogenase 0.9338 16 393
2vig-assembly2.cif.gz_G crystal structure of human short-chain acyl coa dehydrogenase 0.9336 16 393
ID Description Score Start End Superfamily
2cx9A03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9738 246 391 1.20.140.10
2cx9B03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9737 246 391 1.20.140.10
2d29B03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9732 246 391 1.20.140.10
1ws9B03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9722 246 391 1.20.140.10
1ws9A03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.972 246 391 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A526VCX3-F1-model_v4 Acyl-CoA dehydrogenase 0.9904 17 178 GO:0003995
GO:0050660
AF-A0A526VCX3-F1-model_v4 Acyl-CoA dehydrogenase 0.9784 17 178 GO:0003995
GO:0050660
AF-A0A2C9AMJ8-F1-model_v4 deleted 0.9729 19 126
AF-A0A4Q3SUH1-F1-model_v4 Acyl-CoA dehydrogenase family protein 0.9673 14 115 GO:0003995
GO:0050660
AF-A0A6J7FDD3-F1-model_v4 Unannotated protein 0.9624 253 393 GO:0003995
GO:0005737
GO:0033539

Map