F369722

General Info

Members Datasets Scaffolds Average Seq Length
260 175 207 350

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0443980|Ga0436365_0443980_61_1179
Length 372
Sequence VTDLTALAEHPHRRRNALTGEWVLVSPHRTQRPWQGQVEKNAQRKRPAYDPTCYLCPGNARAGGLTNPTYTGTFVFDNDFAALRPGGPAPDAAPPRDPSLRSGQASTESSGNDGLFVASAESGRCRVICFSPRHDLTLPDMDLPAIRGVVDTWAEQYAELGSDPAIGHVQIFENKGEIMGCSNPHPHGQIWAQASIPLHVAREVEHQRAHHDRHGRTLLADYLAEELRRDERIVCANDAFVALVPWWAVWPFETLVIARRPAAHLGELTDDERDGLADIVQRLTRRYDNLFDVSFPYSAGIHQAPTDGQTHPEWHLHMHFYPPLLRSATVRKFLVGYEMLGEPQRDLTAETAAARLRALPETPLDDKSEPLP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
4 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
5 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
6 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
7 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
8 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
9 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
10 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
11 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
12 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
13 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
14 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
15 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
16 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
17 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
18 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
19 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
20 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
21 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
22 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
23 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
24 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
25 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
26 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
27 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
28 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
29 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
30 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
31 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
32 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
33 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
34 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
35 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
36 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
37 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
38 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
39 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
40 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
41 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
42 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
43 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
44 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
45 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
46 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
47 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
48 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
49 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
50 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
51 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
52 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
53 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
54 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
55 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
56 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
57 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
58 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
59 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
60 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
61 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
62 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
63 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
64 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
65 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
66 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
67 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
68 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
69 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
70 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
71 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
72 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
73 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
74 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
75 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
76 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
77 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
82 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
83 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
90 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
101 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
102 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
116 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
123 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
124 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
125 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
126 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
133 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
136 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
137 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
138 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
139 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
140 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
141 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
142 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
143 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
150 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
163 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
164 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
165 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
166 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
167 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
168 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
169 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
172 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
173 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
174 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
175 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.23
Metatranscriptomes 0
Isolates 20.77

Biome Distribution

Category Percentage (%)
Aerial Root 0.77
Bulb 0
Endosphere 3.46
Nodule 1.92
Rhizoplane 0.38
Rhizosphere 72.69
Stem 0
Stem Tuber 0
Unclassified 20.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_294831 2162886007 Bacteria 1557
2 rootH1_10005420 3300003316 Bacteria 4397
3 rootH1_10135199 3300003316 Bacteria 1692
4 rootH2_10151202 3300003320 Bacteria 5028
5 rootL2_10047928 3300003322 Bacteria 4007
6 rootL2_10215223 3300003322 Bacteria 2432
7 rootH1_10002279 3300003323 Bacteria 7734
8 rootH1_10002759 3300003316 Bacteria 4401
9 rootH1_10002759 3300003323 Bacteria 37770
10 Ga0055534_1009110 3300003784 Bacteria 2184
11 Ga0065714_10005199 3300005288 Bacteria 4083
12 Ga0065714_10019058 3300005288 Bacteria 2067
13 Ga0065714_10064658 3300005288 Bacteria 25359
14 Ga0065714_10089111 3300005288 Bacteria 1992
15 Ga0065714_10117859 3300005288 Bacteria 1386
16 Ga0065704_10073255 3300005289 Bacteria 7384
17 Ga0065704_10074952 3300005289 Bacteria 5887
18 Ga0065704_10096694 3300005289 Bacteria 2428
19 Ga0065715_10107970 3300005293 Bacteria 2743
20 Ga0065715_10160273 3300005293 Bacteria 1636
21 Ga0070658_10065751 3300005327 Bacteria 2960
22 Ga0070658_10136129 3300005327 Bacteria 2050
23 Ga0070683_100029843 3300005329 Bacteria 4943
24 Ga0070670_100161646 3300005331 Bacteria 1941
25 Ga0070680_100041672 3300005336 Bacteria 3723
26 Ga0070660_100001349 3300005339 Bacteria 16684
27 Ga0070660_100066512 3300005339 Bacteria 2806
28 Ga0070681_10009843 3300005458 Bacteria 9417
29 Ga0070685_10000513 3300005466 Bacteria 22293
30 Ga0070685_10007636 3300005466 Bacteria 5535
31 Ga0070679_100043259 3300005530 Bacteria 4486
32 Ga0070686_100000009 3300005544 Bacteria 202453
33 Ga0070693_100039861 3300005547 Bacteria 2634
34 Ga0068864_100359854 3300005618 Bacteria 1375
35 Ga0070717_10233237 3300006028 Bacteria 1621
36 Ga0068871_100159428 3300006358 Bacteria 1929
37 Ga0099824_1004036 3300006942 Bacteria 21249
38 Ga0079104_1000079 3300006946 Bacteria 141480
39 Ga0099826_10000622 3300006948 Bacteria 18126
40 Ga0105244_10000054 3300009036 Bacteria 133715
41 Ga0105244_10000819 3300009036 Bacteria 26298
42 Ga0105244_10069628 3300009036 Bacteria 1757
43 Ga0105243_10000057 3300009148 Bacteria 132877
44 Ga0157373_10000035 3300013100 Bacteria 123284
45 Ga0157373_10069776 3300013100 Bacteria 2484
46 Ga0157371_10000037 3300013102 Bacteria 214866
47 Ga0157371_10002347 3300013102 Bacteria 18128
48 Ga0157370_10000172 3300013104 Bacteria 80432
49 Ga0157370_10001319 3300013104 Bacteria 30910
50 Ga0157370_10001800 3300013104 Bacteria 26427
51 Ga0157370_10002406 3300013104 Bacteria 22561
52 Ga0157370_10006955 3300013104 Bacteria 12359
53 Ga0157370_10009368 3300013104 Bacteria 10474
54 Ga0157370_10167298 3300013104 Bacteria 2044
55 Ga0157369_10000235 3300013105 Bacteria 76779
56 Ga0157369_10000403 3300013105 Bacteria 57592
57 Ga0157378_10018921 3300013297 Bacteria 6053
58 Ga0157378_10023935 3300013297 Bacteria 5371
59 Ga0163162_10008428 3300013306 Bacteria 10051
60 Ga0163162_10068051 3300013306 Bacteria 3612
61 Ga0157372_10058092 3300013307 Bacteria 4324
62 Ga0157372_10362289 3300013307 Bacteria 1689
63 Ga0157375_10000052 3300013308 Bacteria 130032
64 Ga0157375_10390582 3300013308 Bacteria 1558
65 Ga0157375_10515219 3300013308 Bacteria 1360
66 Ga0157379_10067921 3300014968 Bacteria 3187
67 Ga0182006_1000048 3300015261 Bacteria 184700
68 Ga0182006_1001210 3300015261 Bacteria 16125
69 Ga0182006_1024523 3300015261 Bacteria 2486
70 Ga0182006_1030148 3300015261 Bacteria 2194
71 Ga0163161_10000091 3300017792 Bacteria 90927
72 Ga0163161_10003015 3300017792 Bacteria 11902
73 Ga0163161_10011001 3300017792 Bacteria 6269
74 Ga0213876_10010471 3300021384 Bacteria 4973
75 Ga0209675_1000032 3300025291 Bacteria 273013
76 Ga0209050_1001485 3300025298 Bacteria 24930
77 Ga0207655_1000003 3300025728 Bacteria 1081376
78 Ga0207655_1004346 3300025728 Bacteria 10089
79 Ga0207705_10064355 3300025909 Bacteria 2650
80 Ga0207707_10170163 3300025912 Bacteria 1904
81 Ga0207657_10042022 3300025919 Bacteria 4037
82 Ga0207650_10235064 3300025925 Bacteria 1479
83 Ga0207706_10072996 3300025933 Bacteria 3017
84 Ga0207709_10000253 3300025935 Bacteria 64210
85 Ga0207675_100165768 3300026118 Bacteria 2110
86 Ga0209281_1000367 3300027111 Bacteria 73152
87 Ga0209489_114892 3300027361 Bacteria 5128
88 Ga0316179_1060979 3300030734 Bacteria 3924
89 Ga0307408_100000277 3300031548 Bacteria 51510
90 Ga0307408_100016990 3300031548 Bacteria 4865
91 Ga0307408_100062919 3300031548 Bacteria 2713
92 Ga0307405_10000884 3300031731 Bacteria 11883
93 Ga0307405_10004528 3300031731 Bacteria 6580
94 Ga0307413_10000001 3300031824 Bacteria 159157
95 Ga0307413_10000686 3300031824 Bacteria 11554
96 Ga0307413_10007542 3300031824 Bacteria 5060
97 Ga0307410_10001785 3300031852 Bacteria 9960
98 Ga0307410_10005979 3300031852 Bacteria 6515
99 Ga0307410_10260783 3300031852 Bacteria 1351
100 Ga0307406_10000028 3300031901 Bacteria 91602
101 Ga0307406_10018036 3300031901 Bacteria 4117
102 Ga0307407_10005614 3300031903 Bacteria 5466
103 Ga0307407_10009661 3300031903 Bacteria 4505
104 Ga0307407_10013559 3300031903 Bacteria 3961
105 Ga0307412_10000028 3300031911 Bacteria 213966
106 Ga0307412_10004848 3300031911 Bacteria 7507
107 Ga0307412_10009676 3300031911 Bacteria 5535
108 Ga0307412_10022367 3300031911 Bacteria 3875
109 Ga0307409_100003296 3300031995 Bacteria 8724
110 Ga0307409_100017460 3300031995 Bacteria 4784
111 Ga0307416_100000052 3300032002 Bacteria 114516
112 Ga0307416_100000066 3300032002 Bacteria 94549
113 Ga0307416_100009954 3300032002 Bacteria 6255
114 Ga0307416_100010895 3300032002 Bacteria 6030
115 Ga0307414_10000022 3300032004 Bacteria 212123
116 Ga0307414_10008680 3300032004 Bacteria 5785
117 Ga0307414_10046798 3300032004 Bacteria 2972
118 Ga0307414_10161029 3300032004 Bacteria 1782
119 Ga0307411_10000003 3300032005 Bacteria 477556
120 Ga0307411_10010990 3300032005 Bacteria 4858
121 Ga0307411_10089455 3300032005 Bacteria 2144
122 Ga0307415_100012711 3300032126 Bacteria 4878
123 Ga0373959_0000690 3300034820 Bacteria 5776
124 Ga0316582_0023699 3300036647 Bacteria 3662
125 Ga0395899_0046908 3300037312 Bacteria 3217
126 Ga0395900_0004904 3300037418 Bacteria 14089
127 Ga0395905_0013984 3300037471 Bacteria 7678
128 Ga0395905_0112953 3300037471 Bacteria 2552
129 Ga0395901_0053606 3300038443 Bacteria 4190
130 Ga0436365_0123980 3300039437 Bacteria 4977
131 Ga0436365_0443980 3300039437 Bacteria 1248
132 Ga0439447_000024 3300041407 Bacteria 53601
133 Ga0439466_0000145 3300041411 Bacteria 28342
134 Ga0439465_0000800 3300041413 Bacteria 9858
135 Ga0439434_0012080 3300042435 Bacteria 2554
136 Ga0450893_0016150 3300042532 Bacteria 1263
137 Ga0451577_0255898 3300042876 Bacteria 1585
138 Ga0453683_0000356 3300044673 Bacteria 55435
139 Ga0466963_0126145 3300044694 Bacteria 1765
140 Ga0453684_0001690 3300044712 Bacteria 59648
141 Ga0453684_0094404 3300044712 Bacteria 3680
142 Ga0453684_0313374 3300044712 Bacteria 1779
143 Ga0453684_0510245 3300044712 Bacteria 1330
144 Ga0451576_0000844 3300045051 Bacteria 59648
145 Ga0451576_0002694 3300045051 Bacteria 25843
146 Ga0451576_0097997 3300045051 Bacteria 3049
147 Ga0451576_0152623 3300045051 Unclassified 2409
148 Ga0466958_0094871 3300045836 Bacteria 1849
149 Ga0495627_001813 3300046453 Bacteria 11365
150 Ga0495638_0000006 3300046460 Bacteria 668846
151 Ga0495596_0003144 3300046500 Bacteria 8504
152 Ga0495607_0027207 3300046501 Bacteria 3539
153 Ga0495606_0007468 3300046507 Bacteria 9771
154 Ga0495610_0000001 3300046512 Bacteria 1620061
155 Ga0495610_0051904 3300046512 Bacteria 1993
156 Ga0495616_0014907 3300046513 Bacteria 4337
157 Ga0495632_0008554 3300046519 Bacteria 6262
158 Ga0495643_0000584 3300046522 Bacteria 44416
159 Ga0495654_0066262 3300046530 Bacteria 1722
160 Ga0495633_0001827 3300046558 Bacteria 15640
161 Ga0495625_0001518 3300046660 Bacteria 27782
162 Ga0495625_0019837 3300046660 Bacteria 5202
163 Ga0495625_0174449 3300046660 Bacteria 1433
164 Ga0496102_0011111 3300048905 Bacteria 7755
165 Ga0496116_0000002 3300048919 Bacteria 920291
166 Ga0496116_0000012 3300048919 Bacteria 611365
167 Ga0496117_0000257 3300048920 Bacteria 99879
168 Ga0496118_0000196 3300048921 Bacteria 106933
169 Ga0496118_0049441 3300048921 Bacteria 3238
170 Ga0496119_0000002 3300048922 Bacteria 738385
171 Ga0496120_0121863 3300048923 Bacteria 1347
172 Ga0496121_0009909 3300048924 Bacteria 10846
173 Ga0496121_0243106 3300048924 Bacteria 1253
174 Ga0496122_0000633 3300048925 Bacteria 71586
175 Ga0496122_0000769 3300048925 Bacteria 61918
176 Ga0496122_0000917 3300048925 Bacteria 53980
177 Ga0496122_0009994 3300048925 Bacteria 9879
178 Ga0496123_0000775 3300048926 Bacteria 51737
179 Ga0496123_0012230 3300048926 Bacteria 7341
180 Ga0496123_0096808 3300048926 Bacteria 1731
181 Ga0496124_0016915 3300048927 Bacteria 6909
182 Ga0496124_0019578 3300048927 Bacteria 6290
183 Ga0496124_0276185 3300048927 Bacteria 1228
184 Ga0496125_0000108 3300048928 Bacteria 196060
185 Ga0496125_0000623 3300048928 Bacteria 59478
186 Ga0496125_0012433 3300048928 Bacteria 8452
187 Ga0496125_0019524 3300048928 Bacteria 6388
188 Ga0496126_0022479 3300048929 Bacteria 6136
189 Ga0501033_0089859 3300049570 Bacteria 2247
190 Ga0501039_0310016 3300049575 Bacteria 1241
191 Ga0501043_0020402 3300049579 Bacteria 5198
192 Ga0501047_0011034 3300049581 Bacteria 8549
193 Ga0501070_0043207 3300049586 Bacteria 3751
194 Ga0501238_000065 3300049671 Bacteria 16862
195 Ga0501249_000002 3300049679 Bacteria 262756
196 Ga0501249_013437 3300049679 Bacteria 1739
197 Ga0501259_014024 3300049688 Bacteria 1354
198 Ga0501264_000640 3300049761 Bacteria 4888
199 Ga0501266_000003 3300049763 Bacteria 388836
200 Ga0501269_000072 3300049766 Bacteria 31457
201 Ga0501269_002464 3300049766 Bacteria 2279
202 Ga0500641_0000033 3300053096 Bacteria 78369
203 Ga0500641_0000108 3300053096 Bacteria 31780
204 Ga0500641_0001198 3300053096 Bacteria 9242
205 Ga0500658_0000015 3300053134 Bacteria 151134
206 Ga0500616_0000044 3300053153 Bacteria 339611
207 Ga0500584_031185 3300053726 Bacteria 2471

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048926 Ga0496123_0096808 Ga0496123_0096808_24_911 295
2 3300031824 Ga0307413_10000001 Ga0307413_100000011 304
3 3300009036 Ga0105244_10000819 Ga0105244_1000081922 322
4 3300025728 Ga0207655_1004346 Ga0207655_10043467 322
5 3300048924 Ga0496121_0243106 Ga0496121_0243106_135_1184 322
6 3300042532 Ga0450893_0016150 Ga0450893_0016150_218_1219 325
7 3300006942 Ga0099824_1004036 Ga0099824_10040366 326
8 3300006948 Ga0099826_10000622 Ga0099826_1000062216 326
9 3300027361 Ga0209489_114892 Ga0209489_1148922 326
10 3300032002 Ga0307416_100000066 Ga0307416_10000006626 326
11 3300015261 Ga0182006_1024523 Ga0182006_10245232 327
12 3300017792 Ga0163161_10003015 Ga0163161_100030154 328
13 3300048924 Ga0496121_0009909 Ga0496121_0009909_6477_7538 329
14 3300048927 Ga0496124_0276185 Ga0496124_0276185_138_1199 329
15 3300049688 Ga0501259_014024 Ga0501259_014024_19_1125 331
16 3300005544 Ga0070686_100000009 Ga0070686_10000000990 332
17 3300030734 Ga0316179_1060979 Ga0316179_10609792 332
18 3300031852 Ga0307410_10001785 Ga0307410_100017857 332
19 3300031903 Ga0307407_10009661 Ga0307407_100096613 332
20 3300032004 Ga0307414_10000022 Ga0307414_10000022108 332
21 3300049671 Ga0501238_000065 Ga0501238_000065_2641_3702 332
22 iso_pu_bacteria 2833640130 2833643934 333
23 3300005466 Ga0070685_10007636 Ga0070685_100076364 335
24 3300031824 Ga0307413_10007542 Ga0307413_100075422 335
25 3300031901 Ga0307406_10018036 Ga0307406_100180361 335
26 3300031903 Ga0307407_10013559 Ga0307407_100135594 335
27 3300032002 Ga0307416_100009954 Ga0307416_1000099542 335
28 3300032004 Ga0307414_10046798 Ga0307414_100467983 335
29 iso_pu_bacteria 2910245624 2910245778 336
30 3300021384 Ga0213876_10010471 Ga0213876_100104714 337
31 3300031548 Ga0307408_100000277 Ga0307408_1000002772 337
32 3300031901 Ga0307406_10000028 Ga0307406_1000002851 337
33 3300039437 Ga0436365_0123980 Ga0436365_0123980_977_2029 337
34 3300049766 Ga0501269_002464 Ga0501269_002464_197_1258 337
35 3300042876 Ga0451577_0255898 Ga0451577_0255898_30_1046 338
36 3300045051 Ga0451576_0152623 Ga0451576_0152623_34_1098 340
37 3300044712 Ga0453684_0313374 Ga0453684_0313374_263_1294 341
38 3300045051 Ga0451576_0097997 Ga0451576_0097997_727_1758 341
39 3300005339 Ga0070660_100001349 Ga0070660_1000013499 342
40 3300025919 Ga0207657_10042022 Ga0207657_100420222 342
41 iso_pu_bacteria 2890737413 2890738922 342
42 3300031731 Ga0307405_10000884 Ga0307405_100008844 343
43 3300031824 Ga0307413_10000686 Ga0307413_100006868 343
44 3300031852 Ga0307410_10005979 Ga0307410_100059795 343
45 3300031911 Ga0307412_10009676 Ga0307412_100096761 343
46 3300031995 Ga0307409_100003296 Ga0307409_1000032965 343
47 3300032002 Ga0307416_100010895 Ga0307416_1000108953 343
48 3300032004 Ga0307414_10008680 Ga0307414_100086804 343
49 3300032005 Ga0307411_10010990 Ga0307411_100109904 343
50 3300044712 Ga0453684_0510245 Ga0453684_0510245_184_1221 343
51 iso_pu_bacteria 2919509842 2919510558 343
52 iso_pu_bacteria 2958512119 2958515053 343
53 3300036647 Ga0316582_0023699 Ga0316582_0023699_2544_3596 344
54 3300049575 Ga0501039_0310016 Ga0501039_0310016_27_1073 344
55 3300049579 Ga0501043_0020402 Ga0501043_0020402_2709_3755 344
56 3300049581 Ga0501047_0011034 Ga0501047_0011034_3920_4966 344
57 3300049586 Ga0501070_0043207 Ga0501070_0043207_1113_2159 344
58 iso_pu_bacteria 2513020052 2513234759 344
59 iso_pu_bacteria 2519899754 2520880524 344
60 iso_pu_bacteria 2643221600 2644012081 344
61 iso_pu_bacteria 2643221667 2644371338 344
62 iso_pu_bacteria 2643221716 2644641347 344
63 iso_pu_bacteria 2643221725 2644682530 344
64 iso_pu_bacteria 2738541279 2738733862 344
65 iso_pu_bacteria 2738541285 2738766181 344
66 iso_pu_bacteria 2738543007 2739215443 344
67 iso_pu_bacteria 2739367857 2740000301 344
68 iso_pu_bacteria 2739367858 2740005117 344
69 iso_pu_bacteria 2802428842 2802651304 344
70 iso_pu_bacteria 2816332280 2817414188 344
71 iso_pu_bacteria 2857613821 2857617745 344
72 iso_pu_bacteria 2857618242 2857621440 344
73 iso_pu_bacteria 2881359912 2881361490 344
74 iso_pu_bacteria 2903895155 2903895264 344
75 iso_pu_bacteria 2904419702 2904420344 344
76 iso_pu_bacteria 2904555929 2904557808 344
77 iso_pu_bacteria 2919191525 2919192455 344
78 iso_pu_bacteria 2919683626 2919684128 344
79 iso_pu_bacteria 2929150217 2929151335 344
80 iso_pu_bacteria 2958458903 2958459611 344
81 iso_pu_bacteria 2965320100 2965321453 344
82 iso_pu_bacteria 2977268062 2977272718 344
83 iso_pu_bacteria 2984572630 2984575898 344
84 iso_pu_bacteria 2984606641 2984609354 344
85 iso_pu_bacteria 8054307821 8054310816 344
86 iso_pu_bacteria 8055419101 8055420065 344
87 iso_pu_bacteria 8055592153 8055596955 344
88 iso_pu_bacteria 8056440228 8056444236 344
89 3300003320 rootH2_10151202 rootH2_101512025 345
90 3300003322 rootL2_10215223 rootL2_102152233 345
91 iso_pu_bacteria 2585428182 2588208292 345
92 iso_pu_bacteria 2585428184 2588219490 345
93 iso_pu_bacteria 2772190705 2772606902 345
94 iso_pu_bacteria 2816332188 2816872874 345
95 iso_pu_bacteria 2842083920 2842083958 345
96 iso_pu_bacteria 2889290771 2889291875 345
97 iso_pu_bacteria 2946019816 2946022220 345
98 iso_pu_bacteria 2993372514 2993373757 345
99 iso_pu_bacteria 2993480792 2993484432 345
100 3300025298 Ga0209050_1001485 Ga0209050_100148511 346
101 3300046460 Ga0495638_0000006 Ga0495638_0000006_527632_528678 346
102 3300053153 Ga0500616_0000044 Ga0500616_0000044_280712_281758 346
103 3300005329 Ga0070683_100029843 Ga0070683_1000298432 347
104 3300005331 Ga0070670_100161646 Ga0070670_1001616462 347
105 3300005618 Ga0068864_100359854 Ga0068864_1003598541 347
106 3300013104 Ga0157370_10000172 Ga0157370_1000017255 347
107 3300013104 Ga0157370_10167298 Ga0157370_101672982 347
108 3300013297 Ga0157378_10023935 Ga0157378_100239352 347
109 3300013306 Ga0163162_10008428 Ga0163162_100084285 347
110 3300013308 Ga0157375_10390582 Ga0157375_103905822 347
111 3300013308 Ga0157375_10515219 Ga0157375_105152192 347
112 3300025925 Ga0207650_10235064 Ga0207650_102350642 347
113 3300025933 Ga0207706_10072996 Ga0207706_100729963 347
114 3300045836 Ga0466958_0094871 Ga0466958_0094871_208_1293 347
115 3300049570 Ga0501033_0089859 Ga0501033_0089859_607_1662 347
116 3300053096 Ga0500641_0000108 Ga0500641_0000108_19516_20562 347
117 3300003316 rootH1_10005420 rootH1_100054202 348
118 3300003322 rootL2_10047928 rootL2_100479283 348
119 3300003323 rootH1_10002759 rootH1_1000275920 348
120 3300005288 Ga0065714_10005199 Ga0065714_100051992 348
121 3300005288 Ga0065714_10019058 Ga0065714_100190581 348
122 3300005288 Ga0065714_10089111 Ga0065714_100891111 348
123 3300005288 Ga0065714_10117859 Ga0065714_101178591 348
124 3300005293 Ga0065715_10107970 Ga0065715_101079702 348
125 3300005293 Ga0065715_10160273 Ga0065715_101602732 348
126 3300005466 Ga0070685_10000513 Ga0070685_1000051311 348
127 3300006946 Ga0079104_1000079 Ga0079104_1000079114 348
128 3300009036 Ga0105244_10000054 Ga0105244_1000005436 348
129 3300009036 Ga0105244_10069628 Ga0105244_100696282 348
130 3300013100 Ga0157373_10000035 Ga0157373_10000035103 348
131 3300013102 Ga0157371_10002347 Ga0157371_1000234716 348
132 3300013104 Ga0157370_10001800 Ga0157370_1000180010 348
133 3300013104 Ga0157370_10006955 Ga0157370_100069553 348
134 3300013104 Ga0157370_10009368 Ga0157370_100093682 348
135 3300013105 Ga0157369_10000235 Ga0157369_1000023533 348
136 3300015261 Ga0182006_1001210 Ga0182006_100121011 348
137 3300015261 Ga0182006_1030148 Ga0182006_10301482 348
138 3300017792 Ga0163161_10000091 Ga0163161_1000009152 348
139 3300017792 Ga0163161_10011001 Ga0163161_100110013 348
140 3300025728 Ga0207655_1000003 Ga0207655_1000003304 348
141 3300027111 Ga0209281_1000367 Ga0209281_100036738 348
142 3300031548 Ga0307408_100062919 Ga0307408_1000629192 348
143 3300032004 Ga0307414_10161029 Ga0307414_101610292 348
144 3300032005 Ga0307411_10000003 Ga0307411_10000003215 348
145 3300034820 Ga0373959_0000690 Ga0373959_0000690_3579_4634 348
146 3300037312 Ga0395899_0046908 Ga0395899_0046908_1009_2082 348
147 3300037418 Ga0395900_0004904 Ga0395900_0004904_11215_12288 348
148 3300037471 Ga0395905_0013984 Ga0395905_0013984_385_1458 348
149 3300038443 Ga0395901_0053606 Ga0395901_0053606_1794_2867 348
150 3300041407 Ga0439447_000024 Ga0439447_000024_49973_51046 348
151 3300041411 Ga0439466_0000145 Ga0439466_0000145_18109_19170 348
152 3300044673 Ga0453683_0000356 Ga0453683_0000356_3167_4222 348
153 3300044712 Ga0453684_0001690 Ga0453684_0001690_51214_52269 348
154 3300044712 Ga0453684_0094404 Ga0453684_0094404_1488_2543 348
155 3300045051 Ga0451576_0000844 Ga0451576_0000844_7380_8435 348
156 3300045051 Ga0451576_0002694 Ga0451576_0002694_11967_13022 348
157 3300046453 Ga0495627_001813 Ga0495627_001813_8925_9971 348
158 3300046501 Ga0495607_0027207 Ga0495607_0027207_651_1697 348
159 3300046512 Ga0495610_0051904 Ga0495610_0051904_686_1765 348
160 3300046513 Ga0495616_0014907 Ga0495616_0014907_1549_2595 348
161 3300046522 Ga0495643_0000584 Ga0495643_0000584_11368_12414 348
162 3300046530 Ga0495654_0066262 Ga0495654_0066262_406_1476 348
163 3300046660 Ga0495625_0019837 Ga0495625_0019837_62_1108 348
164 3300046660 Ga0495625_0174449 Ga0495625_0174449_287_1348 348
165 3300048919 Ga0496116_0000002 Ga0496116_0000002_816644_817705 348
166 3300048921 Ga0496118_0049441 Ga0496118_0049441_1129_2190 348
167 3300048927 Ga0496124_0019578 Ga0496124_0019578_1167_2228 348
168 3300048928 Ga0496125_0000108 Ga0496125_0000108_99380_100441 348
169 3300048929 Ga0496126_0022479 Ga0496126_0022479_4133_5194 348
170 3300049679 Ga0501249_000002 Ga0501249_000002_73569_74618 348
171 3300049679 Ga0501249_013437 Ga0501249_013437_58_1131 348
172 3300049761 Ga0501264_000640 Ga0501264_000640_539_1609 348
173 3300049763 Ga0501266_000003 Ga0501266_000003_136536_137609 348
174 3300053096 Ga0500641_0000033 Ga0500641_0000033_34947_36026 348
175 3300053096 Ga0500641_0001198 Ga0500641_0001198_6206_7255 348
176 3300053134 Ga0500658_0000015 Ga0500658_0000015_58589_59662 348
177 3300053726 Ga0500584_031185 Ga0500584_031185_254_1315 348
178 2162886007 SwRhRL2b_contig_294831 SwRhRL2b_0279.00006190 349
179 3300003316 rootH1_10135199 rootH1_101351991 349
180 3300003323 rootH1_10002279 rootH1_100022796 349
181 3300003784 Ga0055534_1009110 Ga0055534_10091101 349
182 3300005288 Ga0065714_10064658 Ga0065714_100646589 349
183 3300005289 Ga0065704_10073255 Ga0065704_100732552 349
184 3300005289 Ga0065704_10074952 Ga0065704_100749522 349
185 3300005289 Ga0065704_10096694 Ga0065704_100966942 349
186 3300005327 Ga0070658_10065751 Ga0070658_100657513 349
187 3300005327 Ga0070658_10136129 Ga0070658_101361292 349
188 3300005336 Ga0070680_100041672 Ga0070680_1000416722 349
189 3300005339 Ga0070660_100066512 Ga0070660_1000665122 349
190 3300005458 Ga0070681_10009843 Ga0070681_100098434 349
191 3300005530 Ga0070679_100043259 Ga0070679_1000432593 349
192 3300005547 Ga0070693_100039861 Ga0070693_1000398612 349
193 3300006028 Ga0070717_10233237 Ga0070717_102332372 349
194 3300006358 Ga0068871_100159428 Ga0068871_1001594282 349
195 3300009148 Ga0105243_10000057 Ga0105243_1000005740 349
196 3300013100 Ga0157373_10069776 Ga0157373_100697762 349
197 3300013102 Ga0157371_10000037 Ga0157371_1000003739 349
198 3300013104 Ga0157370_10001319 Ga0157370_1000131912 349
199 3300013104 Ga0157370_10002406 Ga0157370_1000240617 349
200 3300013105 Ga0157369_10000403 Ga0157369_1000040315 349
201 3300013297 Ga0157378_10018921 Ga0157378_100189216 349
202 3300013306 Ga0163162_10068051 Ga0163162_100680513 349
203 3300013307 Ga0157372_10058092 Ga0157372_100580925 349
204 3300013307 Ga0157372_10362289 Ga0157372_103622892 349
205 3300013308 Ga0157375_10000052 Ga0157375_1000005235 349
206 3300014968 Ga0157379_10067921 Ga0157379_100679213 349
207 3300015261 Ga0182006_1000048 Ga0182006_1000048112 349
208 3300025291 Ga0209675_1000032 Ga0209675_100003238 349
209 3300025909 Ga0207705_10064355 Ga0207705_100643553 349
210 3300025912 Ga0207707_10170163 Ga0207707_101701632 349
211 3300025935 Ga0207709_10000253 Ga0207709_1000025340 349
212 3300026118 Ga0207675_100165768 Ga0207675_1001657682 349
213 3300031548 Ga0307408_100016990 Ga0307408_1000169904 349
214 3300031731 Ga0307405_10004528 Ga0307405_100045284 349
215 3300031852 Ga0307410_10260783 Ga0307410_102607831 349
216 3300031903 Ga0307407_10005614 Ga0307407_100056143 349
217 3300031911 Ga0307412_10000028 Ga0307412_10000028148 349
218 3300031911 Ga0307412_10004848 Ga0307412_100048484 349
219 3300031911 Ga0307412_10022367 Ga0307412_100223671 349
220 3300031995 Ga0307409_100017460 Ga0307409_1000174603 349
221 3300032002 Ga0307416_100000052 Ga0307416_10000005222 349
222 3300032005 Ga0307411_10089455 Ga0307411_100894553 349
223 3300032126 Ga0307415_100012711 Ga0307415_1000127111 349
224 3300037471 Ga0395905_0112953 Ga0395905_0112953_797_1876 349
225 3300039437 Ga0436365_0443980 Ga0436365_0443980_61_1179 349
226 3300041413 Ga0439465_0000800 Ga0439465_0000800_7010_8086 349
227 3300042435 Ga0439434_0012080 Ga0439434_0012080_684_1757 349
228 3300044694 Ga0466963_0126145 Ga0466963_0126145_531_1607 349
229 3300046500 Ga0495596_0003144 Ga0495596_0003144_4167_5216 349
230 3300046507 Ga0495606_0007468 Ga0495606_0007468_3473_4546 349
231 3300046512 Ga0495610_0000001 Ga0495610_0000001_1215354_1216427 349
232 3300046519 Ga0495632_0008554 Ga0495632_0008554_1224_2300 349
233 3300046558 Ga0495633_0001827 Ga0495633_0001827_6454_7530 349
234 3300046660 Ga0495625_0001518 Ga0495625_0001518_12270_13346 349
235 3300048905 Ga0496102_0011111 Ga0496102_0011111_5432_6481 349
236 3300048919 Ga0496116_0000012 Ga0496116_0000012_192039_193088 349
237 3300048920 Ga0496117_0000257 Ga0496117_0000257_27068_28117 349
238 3300048921 Ga0496118_0000196 Ga0496118_0000196_24906_25955 349
239 3300048922 Ga0496119_0000002 Ga0496119_0000002_366772_367821 349
240 3300048923 Ga0496120_0121863 Ga0496120_0121863_174_1223 349
241 3300048925 Ga0496122_0000633 Ga0496122_0000633_43580_44629 349
242 3300048925 Ga0496122_0000769 Ga0496122_0000769_6058_7107 349
243 3300048925 Ga0496122_0000917 Ga0496122_0000917_6814_7863 349
244 3300048925 Ga0496122_0009994 Ga0496122_0009994_6010_7059 349
245 3300048926 Ga0496123_0000775 Ga0496123_0000775_39729_40778 349
246 3300048926 Ga0496123_0012230 Ga0496123_0012230_2231_3280 349
247 3300048927 Ga0496124_0016915 Ga0496124_0016915_2885_3934 349
248 3300048928 Ga0496125_0000623 Ga0496125_0000623_54850_55899 349
249 3300048928 Ga0496125_0012433 Ga0496125_0012433_391_1479 349
250 3300048928 Ga0496125_0019524 Ga0496125_0019524_3605_4654 349
251 3300049766 Ga0501269_000072 Ga0501269_000072_10763_11839 349
252 iso_pu_bacteria 2511231000 2511234455 349
253 iso_pu_bacteria 2582581281 2585155810 349
254 iso_pu_bacteria 2582581282 2585160266 349
255 iso_pu_bacteria 2585428187 2588234388 349
256 iso_pu_bacteria 2775506739 2775673594 349
257 iso_pu_bacteria 2905999023 2906000688 349
258 iso_pu_bacteria 2919097161 2919097701 349
259 iso_pu_bacteria 2945924605 2945927330 349
260 iso_pu_bacteria 2977243572 2977246496 349

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02744

GalP_UDP_tr_C

Galactose-1-phosphate uridyl transferase, C-terminal domain

203

367

0.97

PF01087

GalP_UDP_transf

Galactose-1-phosphate uridyl transferase, N-terminal domain

3

197

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hxp-assembly1.cif.gz_B nucleotide transferase 0.9258 3 349
1hxq-assembly1.cif.gz_B the structure of nucleotidylated galactose-1-phosphate uridylyltransferase from escherichia coli at 1.86 angstroms resolution 0.9248 3 349
1hxp-assembly1.cif.gz_B nucleotide transferase 0.9231 3 349
1hxq-assembly1.cif.gz_B the structure of nucleotidylated galactose-1-phosphate uridylyltransferase from escherichia coli at 1.86 angstroms resolution 0.9221 3 349
1guq-assembly2.cif.gz_D structure of nucleotidyltransferase complexed with udp-glucose 0.9216 3 347
ID Description Score Start End Superfamily
1hxpB01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9213 3 347 3.30.428.10
1gupA01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9191 179 347 3.30.428.10
1hxpB01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9123 3 347 3.30.428.10
1gupA01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8986 179 347 3.30.428.10
af_Q79FY3_3_179_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8854 167 341 3.30.428.10
ID Description Score Start End GO Terms
AF-A0A2D4NGY7-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) 0.96 111 271 GO:0005737
GO:0008108
GO:0008270
GO:0033499
AF-A0A7R9M0L8-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) 0.9578 123 282 GO:0005737
GO:0008108
GO:0008270
GO:0033499
AF-A0A519LEJ0-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) 0.9571 1 270 GO:0005737
GO:0008108
GO:0008270
GO:0033499
AF-A0A377KAG6-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) 0.952 129 263 GO:0005737
GO:0008108
GO:0008270
GO:0033499
AF-M1ET03-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) 0.9497 67 278 GO:0005737
GO:0008108
GO:0008270
GO:0033499

Feature Viewer

pLDDT pTM Quality
87.23 0.89 High
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Predicted Structure (AlphaFold2)

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