F369664

General Info

Members Datasets Scaffolds Average Seq Length
260 177 260 169

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10719948|Ga0307405_107199481
Length 206
Sequence LRRKANPSWSISRIAGTSESGAARTPAWRPAGAGWYNAVFMSRYEPPRAKQSGYITPEGARKMREELEQLWLVERPKVTQEVSDAAAQGDRSENAEYIYGKRRLREIDRRVRFLNKRLEELKIVDEPPSNPRRVFFGAWVTLEDEDGNALEYRIVGPDEFDVSAGKISMDSPVGRALMGKHLDAEVTVRRPKGDIVYTITDIRYER

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
79 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
80 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
81 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
82 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
83 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
84 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
103 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
108 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
112 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
113 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
114 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
125 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
139 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
140 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
141 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
142 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
143 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
156 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
157 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
158 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
159 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
162 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
163 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
164 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
165 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
166 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
167 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
168 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
169 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
170 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
171 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
172 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
173 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
174 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
175 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
176 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.92
Nodule 0
Rhizoplane 0.38
Rhizosphere 79.23
Stem 0
Stem Tuber 0
Unclassified 8.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10160397 3300003323 Bacteria 7858
2 Ga0070658_10941799 3300005327 Bacteria 751
3 Ga0070683_100556575 3300005329 Bacteria 1097
4 Ga0070690_100003104 3300005330 Bacteria 9036
5 Ga0070670_100732767 3300005331 Bacteria 890
6 Ga0070682_100007898 3300005337 Bacteria 5989
7 Ga0070689_100002487 3300005340 Bacteria 12050
8 Ga0070689_100043525 3300005340 Bacteria 3451
9 Ga0070689_100304195 3300005340 Bacteria 1328
10 Ga0070687_100173025 3300005343 Bacteria 1287
11 Ga0070673_100789405 3300005364 Bacteria 876
12 Ga0070688_100086038 3300005365 Bacteria 2044
13 Ga0070688_100172690 3300005365 Bacteria 1493
14 Ga0070688_100287227 3300005365 Bacteria 1184
15 Ga0070667_100665288 3300005367 Bacteria 962
16 Ga0070700_100295767 3300005441 Bacteria 1180
17 Ga0070694_100387042 3300005444 Bacteria 1092
18 Ga0070685_10734083 3300005466 Bacteria 723
19 Ga0070685_11008892 3300005466 Bacteria 625
20 Ga0068853_100258958 3300005539 Bacteria 1599
21 Ga0070672_100108067 3300005543 Bacteria 2264
22 Ga0070696_100041185 3300005546 Bacteria 3191
23 Ga0070696_100788152 3300005546 Bacteria 781
24 Ga0070693_100338240 3300005547 Bacteria 1026
25 Ga0070665_100005366 3300005548 Bacteria 13235
26 Ga0070665_100017307 3300005548 Bacteria 7234
27 Ga0070665_100034666 3300005548 Bacteria 5076
28 Ga0070665_100113822 3300005548 Bacteria 2708
29 Ga0070704_100973763 3300005549 Bacteria 766
30 Ga0068855_100573805 3300005563 Bacteria 1219
31 Ga0068857_100989919 3300005577 Bacteria 809
32 Ga0068859_100397599 3300005617 Bacteria 1474
33 Ga0068859_100924870 3300005617 Bacteria 956
34 Ga0068866_10067988 3300005718 Bacteria 1872
35 Ga0068861_100180674 3300005719 Bacteria 1756
36 Ga0068861_100406728 3300005719 Bacteria 1209
37 Ga0068863_100072024 3300005841 Bacteria 3270
38 Ga0068860_100000293 3300005843 Bacteria 70629
39 Ga0068862_100031335 3300005844 Bacteria 4488
40 Ga0097621_100970444 3300006237 Bacteria 794
41 Ga0068871_100955784 3300006358 Bacteria 796
42 Ga0075428_102172849 3300006844 Bacteria 573
43 Ga0075430_100080600 3300006846 Bacteria 2727
44 Ga0075431_100118983 3300006847 Bacteria 2726
45 Ga0075429_100092035 3300006880 Bacteria 2645
46 Ga0075429_100194407 3300006880 Bacteria 1777
47 Ga0075436_100265300 3300006914 Bacteria 1225
48 Ga0097620_100397569 3300006931 Bacteria 1474
49 Ga0097620_100924594 3300006931 Bacteria 956
50 Ga0105240_10132334 3300009093 Bacteria 2990
51 Ga0105240_10231723 3300009093 Bacteria 2146
52 Ga0111539_10000352 3300009094 Bacteria 56605
53 Ga0111539_10070272 3300009094 Bacteria 4133
54 Ga0111539_11589395 3300009094 Bacteria 758
55 Ga0105247_10003842 3300009101 Bacteria 9724
56 Ga0114129_10346083 3300009147 Bacteria 1970
57 Ga0105241_10034051 3300009174 Bacteria 3826
58 Ga0105242_10879919 3300009176 Bacteria 894
59 Ga0105248_11541506 3300009177 Bacteria 752
60 Ga0105237_10776144 3300009545 Bacteria 965
61 Ga0105249_10015184 3300009553 Bacteria 6815
62 Ga0105249_10017993 3300009553 Bacteria 6281
63 Ga0105249_10063561 3300009553 Bacteria 3392
64 Ga0105249_10270402 3300009553 Bacteria 1693
65 Ga0105239_10031169 3300010375 Bacteria 5866
66 Ga0157369_11676522 3300013105 Bacteria 646
67 Ga0157378_10027979 3300013297 Bacteria 4971
68 Ga0163163_10172848 3300014325 Bacteria 2207
69 Ga0157379_10009306 3300014968 Bacteria 8557
70 Ga0157379_11349741 3300014968 Bacteria 690
71 Ga0157376_10081047 3300014969 Unclassified 2786
72 Ga0157376_10157637 3300014969 Bacteria 2054
73 Ga0157376_10211843 3300014969 Bacteria 1789
74 Ga0213876_10216252 3300021384 Bacteria 1019
75 Ga0207642_10042845 3300025899 Bacteria 1992
76 Ga0207710_10012356 3300025900 Bacteria 3593
77 Ga0207680_10100300 3300025903 Bacteria 1859
78 Ga0207654_10022348 3300025911 Unclassified 3373
79 Ga0207695_10106680 3300025913 Bacteria 2787
80 Ga0207695_10165808 3300025913 Bacteria 2137
81 Ga0207695_10168430 3300025913 Bacteria 2117
82 Ga0207662_10230943 3300025918 Bacteria 1208
83 Ga0207687_10004376 3300025927 Bacteria 9421
84 Ga0207709_10067854 3300025935 Bacteria 2252
85 Ga0207670_10006591 3300025936 Bacteria 6450
86 Ga0207670_10024393 3300025936 Bacteria 3780
87 Ga0207670_10056560 3300025936 Bacteria 2656
88 Ga0207670_10255937 3300025936 Bacteria 1355
89 Ga0207691_10029351 3300025940 Bacteria 5145
90 Ga0207689_10217355 3300025942 Bacteria 1579
91 Ga0207651_10787643 3300025960 Bacteria 842
92 Ga0207712_10036324 3300025961 Bacteria 3354
93 Ga0207712_10040434 3300025961 Bacteria 3200
94 Ga0207712_10279906 3300025961 Bacteria 1361
95 Ga0207703_10388783 3300026035 Bacteria 1292
96 Ga0207708_10277007 3300026075 Bacteria 1358
97 Ga0207708_10428967 3300026075 Bacteria 1097
98 Ga0207708_10512860 3300026075 Bacteria 1006
99 Ga0207641_10391152 3300026088 Bacteria 1333
100 Ga0207675_100180602 3300026118 Bacteria 2020
101 Ga0207675_100218424 3300026118 Bacteria 1836
102 Ga0207428_10011748 3300027907 Bacteria 7723
103 Ga0207428_10081677 3300027907 Bacteria 2523
104 Ga0268266_10001054 3300028379 Bacteria 34564
105 Ga0268266_10007517 3300028379 Bacteria 9821
106 Ga0268266_10049417 3300028379 Bacteria 3607
107 Ga0268265_10014928 3300028380 Bacteria 5303
108 Ga0268265_10147246 3300028380 Bacteria 1981
109 Ga0268264_10000293 3300028381 Bacteria 83870
110 Ga0268264_10108258 3300028381 Bacteria 2429
111 Ga0268264_10398442 3300028381 Bacteria 1322
112 Ga0265334_10025079 3300028573 Bacteria 2416
113 Ga0265318_10000238 3300028577 Bacteria 47924
114 Ga0307515_10019712 3300028794 Bacteria 12108
115 Ga0307515_10245446 3300028794 Bacteria 1553
116 Ga0265338_10086083 3300028800 Bacteria 2617
117 Ga0307512_10304964 3300030522 Bacteria 738
118 Ga0265330_10000722 3300031235 Bacteria 20832
119 Ga0265330_10164730 3300031235 Unclassified 940
120 Ga0265332_10001368 3300031238 Bacteria 13807
121 Ga0265332_10011407 3300031238 Bacteria 3951
122 Ga0265328_10003092 3300031239 Bacteria 7429
123 Ga0265320_10000573 3300031240 Bacteria 28289
124 Ga0265325_10004996 3300031241 Bacteria 8260
125 Ga0265325_10142266 3300031241 Bacteria 1140
126 Ga0265329_10000377 3300031242 Bacteria 23573
127 Ga0265340_10013846 3300031247 Bacteria 4226
128 Ga0265339_10002895 3300031249 Bacteria 12149
129 Ga0265339_10037179 3300031249 Bacteria 2721
130 Ga0265339_10226857 3300031249 Bacteria 911
131 Ga0265331_10001107 3300031250 Bacteria 20737
132 Ga0265316_10000621 3300031344 Bacteria 39534
133 Ga0265316_10001381 3300031344 Bacteria 26164
134 Ga0265316_10009270 3300031344 Bacteria 9064
135 Ga0307513_10020894 3300031456 Bacteria 7746
136 Ga0307513_10024433 3300031456 Bacteria 7031
137 Ga0307513_10302892 3300031456 Bacteria 1364
138 Ga0307509_10000264 3300031507 Bacteria 86090
139 Ga0307509_10060248 3300031507 Bacteria 4013
140 Ga0307509_10093757 3300031507 Bacteria 3063
141 Ga0307509_10610211 3300031507 Bacteria 763
142 Ga0265313_10000159 3300031595 Bacteria 70412
143 Ga0265313_10000498 3300031595 Bacteria 41265
144 Ga0307508_10003358 3300031616 Bacteria 16239
145 Ga0265314_10000001 3300031711 Bacteria 3792860
146 Ga0265314_10041764 3300031711 Bacteria 3278
147 Ga0265342_10000431 3300031712 Bacteria 45881
148 Ga0265342_10041243 3300031712 Bacteria 2796
149 Ga0265342_10223795 3300031712 Bacteria 1013
150 Ga0316576_10000013 3300031727 Bacteria 50062
151 Ga0316578_10171591 3300031728 Bacteria 1307
152 Ga0307516_10007224 3300031730 Bacteria 12806
153 Ga0307516_10082088 3300031730 Bacteria 3065
154 Ga0307405_10719948 3300031731 Bacteria 828
155 Ga0307412_10103922 3300031911 Bacteria 2015
156 Ga0307416_100126679 3300032002 Bacteria 2289
157 Ga0307415_101034170 3300032126 Bacteria 765
158 Ga0307507_10220267 3300033179 Bacteria 1277
159 Ga0307510_10000002 3300033180 Bacteria 801565
160 Ga0307510_10038349 3300033180 Bacteria 5299
161 Ga0373955_0774966 3300035172 Bacteria 589
162 Ga0373961_0000029 3300035241 Bacteria 93421
163 Ga0373937_0451818 3300036401 Bacteria 1220
164 Ga0316582_0407174 3300036647 Bacteria 937
165 Ga0316584_0471186 3300036712 Bacteria 886
166 Ga0395905_0188228 3300037471 Bacteria 1937
167 Ga0436365_0436477 3300039437 Bacteria 1325
168 Ga0436365_1375431 3300039437 Bacteria 603
169 Ga0451797_0145720 3300041453 Bacteria 961
170 Ga0451847_0543161 3300041503 Bacteria 598
171 Ga0451853_1563824 3300041512 Bacteria 730
172 Ga0466969_0000900 3300044656 Bacteria 16060
173 Ga0453683_0002928 3300044673 Bacteria 12870
174 Ga0453683_0273209 3300044673 Unclassified 1079
175 Ga0453684_0362712 3300044712 Bacteria 1631
176 Ga0453684_0419589 3300044712 Bacteria 1495
177 Ga0466959_0051451 3300045049 Bacteria 3021
178 Ga0451576_0032245 3300045051 Bacteria 5582
179 Ga0451576_1413211 3300045051 Bacteria 724
180 Ga0495603_0596556 3300046455 Bacteria 632
181 Ga0495643_0114775 3300046522 Bacteria 1366
182 Ga0495640_0367613 3300046533 Bacteria 886
183 Ga0495625_0283433 3300046660 Bacteria 1065
184 Ga0495658_0394311 3300046683 Bacteria 882
185 Ga0495649_0148305 3300046694 Bacteria 1233
186 Ga0495680_0094641 3300047322 Bacteria 2235
187 Ga0495687_171123 3300047443 Bacteria 719
188 Ga0495686_0168205 3300047472 Bacteria 1276
189 Ga0501042_0091807 3300049578 Bacteria 2180
190 Ga0501047_0529932 3300049581 Bacteria 1003
191 Ga0501048_0655367 3300049582 Bacteria 754
192 Ga0501067_0205864 3300049583 Bacteria 1096
193 Ga0501068_0093829 3300049584 Bacteria 1854
194 Ga0501070_0077889 3300049586 Bacteria 2743
195 Ga0501071_0328374 3300049587 Bacteria 1162
196 Ga0501072_0026062 3300049588 Bacteria 4556
197 Ga0501073_0102370 3300049589 Bacteria 1989
198 Ga0501073_0775888 3300049589 Bacteria 661
199 Ga0501076_0194368 3300049592 Bacteria 1656
200 Ga0501209_024937 3300049656 Bacteria 1463
201 Ga0501217_021716 3300049661 Bacteria 1517
202 Ga0501217_068254 3300049661 Bacteria 963
203 Ga0501227_000573 3300049665 Bacteria 8046
204 Ga0501230_001346 3300049667 Bacteria 2903
205 Ga0501225_0005655 3300049705 Bacteria 3664
206 Ga0501229_021940 3300049706 Bacteria 849
207 Ga0501080_0054370 3300049742 Bacteria 3728
208 Ga0501080_0359387 3300049742 Bacteria 1314
209 Ga0501083_0017680 3300049744 Bacteria 4971
210 Ga0501083_0098253 3300049744 Bacteria 1931
211 Ga0501035_0503124 3300049822 Bacteria 997
212 nmdc:mga05p37_284585_c1 3300050507 Bacteria 1970
213 nmdc:mga09592_264567_c1 3300050508 Bacteria 1492
214 nmdc:mga09592_451736_c1 3300050508 Bacteria 1109
215 nmdc:mga09592_472730_c1 3300050508 Bacteria 1080
216 nmdc:mga09592_86491_c1 3300050508 Bacteria 2675
217 nmdc:mga0qj67_432831_c1 3300050509 Bacteria 1060
218 nmdc:mga0qj67_86774_c1 3300050509 Bacteria 2511
219 nmdc:mga06r32_323181_c1 3300050510 Bacteria 1528
220 nmdc:mga06r32_379232_c1 3300050510 Bacteria 1397
221 nmdc:mga08y16_1192756_c1 3300050511 Bacteria 732
222 nmdc:mga08y16_1627_c1 3300050511 Bacteria 22743
223 nmdc:mga08y16_9289_c1 3300050511 Bacteria 10313
224 nmdc:mga0n895_226531_c1 3300050512 Bacteria 1897
225 nmdc:mga0rr50_230192_c1 3300050513 Bacteria 1533
226 nmdc:mga08x19_274440_c1 3300050514 Bacteria 1167
227 Ga0500635_0080903 3300053080 Bacteria 1167
228 Ga0500578_0160151 3300053086 Bacteria 1397
229 Ga0500578_0171596 3300053086 Bacteria 1341
230 Ga0500566_0003361 3300053094 Bacteria 9552
231 Ga0500566_0010534 3300053094 Bacteria 5452
232 Ga0500566_0182276 3300053094 Bacteria 1076
233 Ga0500640_003042 3300053095 Bacteria 5728
234 Ga0500554_000160 3300053102 Bacteria 13849
235 Ga0500554_023778 3300053102 Bacteria 1728
236 Ga0500562_007414 3300053108 Bacteria 2767
237 Ga0500572_002051 3300053111 Bacteria 5006
238 Ga0500595_000223 3300053119 Bacteria 38788
239 Ga0500597_020925 3300053120 Bacteria 2575
240 Ga0500614_000297 3300053123 Bacteria 12776
241 Ga0500614_030495 3300053123 Bacteria 1315
242 Ga0500642_0122673 3300053130 Bacteria 1216
243 Ga0500559_0067179 3300053136 Bacteria 1609
244 Ga0500559_0076011 3300053136 Bacteria 1520
245 Ga0500559_0262107 3300053136 Bacteria 814
246 Ga0500568_0000289 3300053139 Bacteria 41443
247 Ga0500590_070059 3300053148 Bacteria 1745
248 Ga0500603_057521 3300053150 Bacteria 1080
249 Ga0500622_0261864 3300053156 Bacteria 754
250 Ga0500630_076054 3300053159 Bacteria 1580
251 Ga0500639_138441 3300053163 Bacteria 1142
252 Ga0500636_0076503 3300053177 Bacteria 1935
253 Ga0500637_0042155 3300053178 Bacteria 2580
254 Ga0500637_0058310 3300053178 Bacteria 2209
255 Ga0500637_0104003 3300053178 Bacteria 1647
256 Ga0500637_0190479 3300053178 Bacteria 1172
257 Ga0500601_017349 3300053737 Bacteria 825
258 Ga0501082_0050454 3300060353 Bacteria 3588
259 Ga0501082_0579974 3300060353 Bacteria 981
260 Ga0530510_1086221 3300061734 Bacteria 613

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050509 nmdc:mga0qj67_86774_c1 nmdc:mga0qj67_86774_c1_1941_2384 145
2 3300050510 nmdc:mga06r32_379232_c1 nmdc:mga06r32_379232_c1_479_922 145
3 3300005546 Ga0070696_100788152 Ga0070696_1007881522 150
4 3300005549 Ga0070704_100973763 Ga0070704_1009737631 150
5 3300045051 Ga0451576_1413211 Ga0451576_1413211_171_641 151
6 3300046533 Ga0495640_0367613 Ga0495640_0367613_312_782 151
7 3300046683 Ga0495658_0394311 Ga0495658_0394311_376_846 151
8 3300047322 Ga0495680_0094641 Ga0495680_0094641_1740_2210 151
9 3300005365 Ga0070688_100287227 Ga0070688_1002872272 153
10 3300005617 Ga0068859_100924870 Ga0068859_1009248702 153
11 3300006931 Ga0097620_100924594 Ga0097620_1009245942 153
12 3300025936 Ga0207670_10056560 Ga0207670_100565603 153
13 3300005337 Ga0070682_100007898 Ga0070682_1000078986 154
14 3300005364 Ga0070673_100789405 Ga0070673_1007894052 154
15 3300005543 Ga0070672_100108067 Ga0070672_1001080672 154
16 3300005547 Ga0070693_100338240 Ga0070693_1003382402 154
17 3300006358 Ga0068871_100955784 Ga0068871_1009557842 154
18 3300013105 Ga0157369_11676522 Ga0157369_116765221 154
19 3300025940 Ga0207691_10029351 Ga0207691_100293513 154
20 3300025960 Ga0207651_10787643 Ga0207651_107876432 154
21 3300031456 Ga0307513_10024433 Ga0307513_100244336 154
22 3300031456 Ga0307513_10302892 Ga0307513_103028922 154
23 3300031616 Ga0307508_10003358 Ga0307508_100033588 154
24 3300039437 Ga0436365_1375431 Ga0436365_1375431_22_543 154
25 3300003323 rootH1_10160397 rootH1_101603972 155
26 3300005327 Ga0070658_10941799 Ga0070658_109417992 155
27 3300005329 Ga0070683_100556575 Ga0070683_1005565752 155
28 3300005330 Ga0070690_100003104 Ga0070690_1000031045 155
29 3300005331 Ga0070670_100732767 Ga0070670_1007327671 155
30 3300005340 Ga0070689_100002487 Ga0070689_1000024878 155
31 3300005340 Ga0070689_100043525 Ga0070689_1000435254 155
32 3300005340 Ga0070689_100304195 Ga0070689_1003041952 155
33 3300005343 Ga0070687_100173025 Ga0070687_1001730251 155
34 3300005365 Ga0070688_100086038 Ga0070688_1000860382 155
35 3300005365 Ga0070688_100172690 Ga0070688_1001726902 155
36 3300005367 Ga0070667_100665288 Ga0070667_1006652882 155
37 3300005441 Ga0070700_100295767 Ga0070700_1002957672 155
38 3300005444 Ga0070694_100387042 Ga0070694_1003870422 155
39 3300005466 Ga0070685_10734083 Ga0070685_107340832 155
40 3300005466 Ga0070685_11008892 Ga0070685_110088921 155
41 3300005539 Ga0068853_100258958 Ga0068853_1002589582 155
42 3300005546 Ga0070696_100041185 Ga0070696_1000411852 155
43 3300005548 Ga0070665_100005366 Ga0070665_10000536611 155
44 3300005548 Ga0070665_100017307 Ga0070665_1000173073 155
45 3300005548 Ga0070665_100034666 Ga0070665_1000346662 155
46 3300005548 Ga0070665_100113822 Ga0070665_1001138223 155
47 3300005563 Ga0068855_100573805 Ga0068855_1005738052 155
48 3300005577 Ga0068857_100989919 Ga0068857_1009899192 155
49 3300005617 Ga0068859_100397599 Ga0068859_1003975992 155
50 3300005718 Ga0068866_10067988 Ga0068866_100679882 155
51 3300005719 Ga0068861_100180674 Ga0068861_1001806742 155
52 3300005719 Ga0068861_100406728 Ga0068861_1004067281 155
53 3300005841 Ga0068863_100072024 Ga0068863_1000720242 155
54 3300005843 Ga0068860_100000293 Ga0068860_10000029333 155
55 3300005844 Ga0068862_100031335 Ga0068862_1000313352 155
56 3300006237 Ga0097621_100970444 Ga0097621_1009704442 155
57 3300006844 Ga0075428_102172849 Ga0075428_1021728491 155
58 3300006846 Ga0075430_100080600 Ga0075430_1000806002 155
59 3300006847 Ga0075431_100118983 Ga0075431_1001189834 155
60 3300006880 Ga0075429_100092035 Ga0075429_1000920353 155
61 3300006880 Ga0075429_100194407 Ga0075429_1001944073 155
62 3300006914 Ga0075436_100265300 Ga0075436_1002653002 155
63 3300006931 Ga0097620_100397569 Ga0097620_1003975692 155
64 3300009093 Ga0105240_10132334 Ga0105240_101323343 155
65 3300009093 Ga0105240_10231723 Ga0105240_102317232 155
66 3300009094 Ga0111539_10000352 Ga0111539_1000035213 155
67 3300009094 Ga0111539_10070272 Ga0111539_100702722 155
68 3300009094 Ga0111539_11589395 Ga0111539_115893952 155
69 3300009101 Ga0105247_10003842 Ga0105247_100038427 155
70 3300009147 Ga0114129_10346083 Ga0114129_103460832 155
71 3300009174 Ga0105241_10034051 Ga0105241_100340513 155
72 3300009176 Ga0105242_10879919 Ga0105242_108799191 155
73 3300009177 Ga0105248_11541506 Ga0105248_115415062 155
74 3300009545 Ga0105237_10776144 Ga0105237_107761441 155
75 3300009553 Ga0105249_10015184 Ga0105249_100151844 155
76 3300009553 Ga0105249_10017993 Ga0105249_100179932 155
77 3300009553 Ga0105249_10063561 Ga0105249_100635613 155
78 3300009553 Ga0105249_10270402 Ga0105249_102704022 155
79 3300010375 Ga0105239_10031169 Ga0105239_100311694 155
80 3300013297 Ga0157378_10027979 Ga0157378_100279793 155
81 3300014325 Ga0163163_10172848 Ga0163163_101728483 155
82 3300014968 Ga0157379_10009306 Ga0157379_100093062 155
83 3300014968 Ga0157379_11349741 Ga0157379_113497411 155
84 3300014969 Ga0157376_10081047 Ga0157376_100810472 155
85 3300014969 Ga0157376_10157637 Ga0157376_101576372 155
86 3300014969 Ga0157376_10211843 Ga0157376_102118432 155
87 3300021384 Ga0213876_10216252 Ga0213876_102162521 155
88 3300025899 Ga0207642_10042845 Ga0207642_100428452 155
89 3300025900 Ga0207710_10012356 Ga0207710_100123563 155
90 3300025903 Ga0207680_10100300 Ga0207680_101003002 155
91 3300025911 Ga0207654_10022348 Ga0207654_100223483 155
92 3300025913 Ga0207695_10106680 Ga0207695_101066802 155
93 3300025913 Ga0207695_10165808 Ga0207695_101658082 155
94 3300025913 Ga0207695_10168430 Ga0207695_101684302 155
95 3300025918 Ga0207662_10230943 Ga0207662_102309432 155
96 3300025927 Ga0207687_10004376 Ga0207687_100043762 155
97 3300025935 Ga0207709_10067854 Ga0207709_100678543 155
98 3300025936 Ga0207670_10006591 Ga0207670_100065913 155
99 3300025936 Ga0207670_10024393 Ga0207670_100243933 155
100 3300025936 Ga0207670_10255937 Ga0207670_102559372 155
101 3300025942 Ga0207689_10217355 Ga0207689_102173552 155
102 3300025961 Ga0207712_10036324 Ga0207712_100363242 155
103 3300025961 Ga0207712_10040434 Ga0207712_100404343 155
104 3300025961 Ga0207712_10279906 Ga0207712_102799062 155
105 3300026035 Ga0207703_10388783 Ga0207703_103887832 155
106 3300026075 Ga0207708_10277007 Ga0207708_102770072 155
107 3300026075 Ga0207708_10428967 Ga0207708_104289672 155
108 3300026075 Ga0207708_10512860 Ga0207708_105128602 155
109 3300026088 Ga0207641_10391152 Ga0207641_103911522 155
110 3300026118 Ga0207675_100180602 Ga0207675_1001806021 155
111 3300026118 Ga0207675_100218424 Ga0207675_1002184242 155
112 3300027907 Ga0207428_10011748 Ga0207428_100117487 155
113 3300027907 Ga0207428_10081677 Ga0207428_100816772 155
114 3300028379 Ga0268266_10001054 Ga0268266_1000105435 155
115 3300028379 Ga0268266_10007517 Ga0268266_100075174 155
116 3300028379 Ga0268266_10049417 Ga0268266_100494172 155
117 3300028380 Ga0268265_10014928 Ga0268265_100149283 155
118 3300028380 Ga0268265_10147246 Ga0268265_101472462 155
119 3300028381 Ga0268264_10000293 Ga0268264_1000029364 155
120 3300028381 Ga0268264_10108258 Ga0268264_101082582 155
121 3300028381 Ga0268264_10398442 Ga0268264_103984422 155
122 3300028573 Ga0265334_10025079 Ga0265334_100250793 155
123 3300028577 Ga0265318_10000238 Ga0265318_1000023825 155
124 3300028794 Ga0307515_10019712 Ga0307515_100197128 155
125 3300028794 Ga0307515_10245446 Ga0307515_102454462 155
126 3300028800 Ga0265338_10086083 Ga0265338_100860833 155
127 3300030522 Ga0307512_10304964 Ga0307512_103049642 155
128 3300031235 Ga0265330_10000722 Ga0265330_100007222 155
129 3300031235 Ga0265330_10164730 Ga0265330_101647302 155
130 3300031238 Ga0265332_10001368 Ga0265332_100013687 155
131 3300031238 Ga0265332_10011407 Ga0265332_100114072 155
132 3300031239 Ga0265328_10003092 Ga0265328_100030922 155
133 3300031240 Ga0265320_10000573 Ga0265320_100005733 155
134 3300031241 Ga0265325_10004996 Ga0265325_100049964 155
135 3300031241 Ga0265325_10142266 Ga0265325_101422662 155
136 3300031242 Ga0265329_10000377 Ga0265329_1000037715 155
137 3300031247 Ga0265340_10013846 Ga0265340_100138463 155
138 3300031249 Ga0265339_10002895 Ga0265339_100028958 155
139 3300031249 Ga0265339_10037179 Ga0265339_100371793 155
140 3300031249 Ga0265339_10226857 Ga0265339_102268572 155
141 3300031250 Ga0265331_10001107 Ga0265331_100011074 155
142 3300031344 Ga0265316_10000621 Ga0265316_1000062138 155
143 3300031344 Ga0265316_10001381 Ga0265316_1000138118 155
144 3300031344 Ga0265316_10009270 Ga0265316_100092704 155
145 3300031456 Ga0307513_10020894 Ga0307513_100208945 155
146 3300031507 Ga0307509_10000264 Ga0307509_1000026425 155
147 3300031507 Ga0307509_10060248 Ga0307509_100602483 155
148 3300031507 Ga0307509_10093757 Ga0307509_100937573 155
149 3300031507 Ga0307509_10610211 Ga0307509_106102112 155
150 3300031595 Ga0265313_10000159 Ga0265313_1000015937 155
151 3300031595 Ga0265313_10000498 Ga0265313_1000049817 155
152 3300031711 Ga0265314_10000001 Ga0265314_100000011300 155
153 3300031711 Ga0265314_10041764 Ga0265314_100417643 155
154 3300031712 Ga0265342_10000431 Ga0265342_100004312 155
155 3300031712 Ga0265342_10041243 Ga0265342_100412432 155
156 3300031712 Ga0265342_10223795 Ga0265342_102237952 155
157 3300031727 Ga0316576_10000013 Ga0316576_1000001332 155
158 3300031728 Ga0316578_10171591 Ga0316578_101715912 155
159 3300031730 Ga0307516_10007224 Ga0307516_100072248 155
160 3300031730 Ga0307516_10082088 Ga0307516_100820883 155
161 3300031731 Ga0307405_10719948 Ga0307405_107199481 155
162 3300031911 Ga0307412_10103922 Ga0307412_101039221 155
163 3300032002 Ga0307416_100126679 Ga0307416_1001266792 155
164 3300032126 Ga0307415_101034170 Ga0307415_1010341701 155
165 3300033179 Ga0307507_10220267 Ga0307507_102202672 155
166 3300033180 Ga0307510_10000002 Ga0307510_10000002504 155
167 3300033180 Ga0307510_10038349 Ga0307510_100383492 155
168 3300035172 Ga0373955_0774966 Ga0373955_0774966_51_560 155
169 3300035241 Ga0373961_0000029 Ga0373961_0000029_53118_53621 155
170 3300036401 Ga0373937_0451818 Ga0373937_0451818_144_659 155
171 3300036647 Ga0316582_0407174 Ga0316582_0407174_137_610 155
172 3300036712 Ga0316584_0471186 Ga0316584_0471186_300_773 155
173 3300037471 Ga0395905_0188228 Ga0395905_0188228_1099_1614 155
174 3300039437 Ga0436365_0436477 Ga0436365_0436477_287_790 155
175 3300041453 Ga0451797_0145720 Ga0451797_0145720_70_537 155
176 3300041503 Ga0451847_0543161 Ga0451847_0543161_56_571 155
177 3300041512 Ga0451853_1563824 Ga0451853_1563824_103_606 155
178 3300044656 Ga0466969_0000900 Ga0466969_0000900_5984_6493 155
179 3300044673 Ga0453683_0002928 Ga0453683_0002928_1918_2391 155
180 3300044673 Ga0453683_0273209 Ga0453683_0273209_158_631 155
181 3300044712 Ga0453684_0362712 Ga0453684_0362712_546_1100 155
182 3300044712 Ga0453684_0419589 Ga0453684_0419589_227_700 155
183 3300045049 Ga0466959_0051451 Ga0466959_0051451_2296_2805 155
184 3300045051 Ga0451576_0032245 Ga0451576_0032245_779_1333 155
185 3300046455 Ga0495603_0596556 Ga0495603_0596556_38_514 155
186 3300046522 Ga0495643_0114775 Ga0495643_0114775_760_1272 155
187 3300046660 Ga0495625_0283433 Ga0495625_0283433_132_644 155
188 3300046694 Ga0495649_0148305 Ga0495649_0148305_128_646 155
189 3300047443 Ga0495687_171123 Ga0495687_171123_135_647 155
190 3300047472 Ga0495686_0168205 Ga0495686_0168205_670_1200 155
191 3300049578 Ga0501042_0091807 Ga0501042_0091807_564_1073 155
192 3300049581 Ga0501047_0529932 Ga0501047_0529932_225_707 155
193 3300049582 Ga0501048_0655367 Ga0501048_0655367_258_725 155
194 3300049583 Ga0501067_0205864 Ga0501067_0205864_243_755 155
195 3300049584 Ga0501068_0093829 Ga0501068_0093829_839_1351 155
196 3300049586 Ga0501070_0077889 Ga0501070_0077889_1143_1655 155
197 3300049587 Ga0501071_0328374 Ga0501071_0328374_489_1001 155
198 3300049588 Ga0501072_0026062 Ga0501072_0026062_2188_2700 155
199 3300049589 Ga0501073_0102370 Ga0501073_0102370_1151_1663 155
200 3300049589 Ga0501073_0775888 Ga0501073_0775888_26_535 155
201 3300049592 Ga0501076_0194368 Ga0501076_0194368_430_939 155
202 3300049656 Ga0501209_024937 Ga0501209_024937_477_1016 155
203 3300049661 Ga0501217_021716 Ga0501217_021716_792_1331 155
204 3300049661 Ga0501217_068254 Ga0501217_068254_102_620 155
205 3300049665 Ga0501227_000573 Ga0501227_000573_483_1022 155
206 3300049667 Ga0501230_001346 Ga0501230_001346_382_921 155
207 3300049705 Ga0501225_0005655 Ga0501225_0005655_243_782 155
208 3300049706 Ga0501229_021940 Ga0501229_021940_168_707 155
209 3300049742 Ga0501080_0054370 Ga0501080_0054370_3200_3709 155
210 3300049742 Ga0501080_0359387 Ga0501080_0359387_597_1109 155
211 3300049744 Ga0501083_0017680 Ga0501083_0017680_3603_4076 155
212 3300049744 Ga0501083_0098253 Ga0501083_0098253_854_1366 155
213 3300049822 Ga0501035_0503124 Ga0501035_0503124_267_734 155
214 3300050507 nmdc:mga05p37_284585_c1 nmdc:mga05p37_284585_c1_377_877 155
215 3300050508 nmdc:mga09592_264567_c1 nmdc:mga09592_264567_c1_322_846 155
216 3300050508 nmdc:mga09592_451736_c1 nmdc:mga09592_451736_c1_95_610 155
217 3300050508 nmdc:mga09592_472730_c1 nmdc:mga09592_472730_c1_540_1016 155
218 3300050508 nmdc:mga09592_86491_c1 nmdc:mga09592_86491_c1_1511_2101 155
219 3300050509 nmdc:mga0qj67_432831_c1 nmdc:mga0qj67_432831_c1_24_527 155
220 3300050510 nmdc:mga06r32_323181_c1 nmdc:mga06r32_323181_c1_903_1406 155
221 3300050511 nmdc:mga08y16_1192756_c1 nmdc:mga08y16_1192756_c1_23_499 155
222 3300050511 nmdc:mga08y16_1627_c1 nmdc:mga08y16_1627_c1_1115_1627 155
223 3300050511 nmdc:mga08y16_9289_c1 nmdc:mga08y16_9289_c1_6800_7276 155
224 3300050512 nmdc:mga0n895_226531_c1 nmdc:mga0n895_226531_c1_501_1013 155
225 3300050513 nmdc:mga0rr50_230192_c1 nmdc:mga0rr50_230192_c1_564_1076 155
226 3300050514 nmdc:mga08x19_274440_c1 nmdc:mga08x19_274440_c1_597_1070 155
227 3300053080 Ga0500635_0080903 Ga0500635_0080903_283_786 155
228 3300053086 Ga0500578_0160151 Ga0500578_0160151_611_1114 155
229 3300053086 Ga0500578_0171596 Ga0500578_0171596_258_764 155
230 3300053094 Ga0500566_0003361 Ga0500566_0003361_6985_7488 155
231 3300053094 Ga0500566_0010534 Ga0500566_0010534_4331_4834 155
232 3300053094 Ga0500566_0182276 Ga0500566_0182276_250_753 155
233 3300053095 Ga0500640_003042 Ga0500640_003042_1946_2449 155
234 3300053102 Ga0500554_000160 Ga0500554_000160_11159_11662 155
235 3300053102 Ga0500554_023778 Ga0500554_023778_411_914 155
236 3300053108 Ga0500562_007414 Ga0500562_007414_217_801 155
237 3300053111 Ga0500572_002051 Ga0500572_002051_1816_2319 155
238 3300053119 Ga0500595_000223 Ga0500595_000223_8642_9145 155
239 3300053120 Ga0500597_020925 Ga0500597_020925_26_529 155
240 3300053123 Ga0500614_000297 Ga0500614_000297_8749_9252 155
241 3300053123 Ga0500614_030495 Ga0500614_030495_562_1065 155
242 3300053130 Ga0500642_0122673 Ga0500642_0122673_41_544 155
243 3300053136 Ga0500559_0067179 Ga0500559_0067179_673_1176 155
244 3300053136 Ga0500559_0076011 Ga0500559_0076011_768_1271 155
245 3300053136 Ga0500559_0262107 Ga0500559_0262107_218_727 155
246 3300053139 Ga0500568_0000289 Ga0500568_0000289_33229_33753 155
247 3300053148 Ga0500590_070059 Ga0500590_070059_595_1098 155
248 3300053150 Ga0500603_057521 Ga0500603_057521_567_1070 155
249 3300053156 Ga0500622_0261864 Ga0500622_0261864_146_658 155
250 3300053159 Ga0500630_076054 Ga0500630_076054_349_891 155
251 3300053163 Ga0500639_138441 Ga0500639_138441_64_606 155
252 3300053177 Ga0500636_0076503 Ga0500636_0076503_348_851 155
253 3300053178 Ga0500637_0042155 Ga0500637_0042155_697_1200 155
254 3300053178 Ga0500637_0058310 Ga0500637_0058310_1671_2174 155
255 3300053178 Ga0500637_0104003 Ga0500637_0104003_86_595 155
256 3300053178 Ga0500637_0190479 Ga0500637_0190479_171_677 155
257 3300053737 Ga0500601_017349 Ga0500601_017349_184_687 155
258 3300060353 Ga0501082_0050454 Ga0501082_0050454_834_1346 155
259 3300060353 Ga0501082_0579974 Ga0501082_0579974_219_728 155
260 3300061734 Ga0530510_1086221 Ga0530510_1086221_18_527 155

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03449

GreA_GreB_N

Transcription elongation factor, N-terminal

53

123

0.98

PF01272

GreA_GreB

Transcription elongation factor, GreA/GreB, C-term

128

204

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tod-assembly1.cif.gz_L 2.05a resolution structure of bfrb (d34f) from pseudomonas aeruginosa 0.9389 10 69
4toe-assembly1.cif.gz_F 2.20a resolution structure of iron bound bfrb (d34f) from pseudomonas aeruginosa 0.9382 10 69
4tob-assembly1.cif.gz_E 1.95a resolution structure of bfrb (q151l) from pseudomonas aeruginosa 0.9368 10 69
5d8q-assembly1.cif.gz_J-2 2.20a resolution structure of bfrb (l68a) from pseudomonas aeruginosa 0.9358 10 69
5d8r-assembly1.cif.gz_C error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9351 10 69
ID Description Score Start End Superfamily
af_Q2FXW7_4_78_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9774 1 74 1.10.287.180
af_P0A6W5_1_75_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9631 1 74 1.10.287.180
af_P30128_1_76_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9617 1 75 1.10.287.180
1grjA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9549 1 74 1.10.287.180
af_P9WMT9_4_78_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9534 1 75 1.10.287.180
ID Description Score Start End GO Terms
AF-A0A3B9B5S0-F1-model_v4 deleted 0.9866 3 75
AF-A0A2D6FLG3-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.9791 1 153 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A1V4IC06-F1-model_v4 Transcription inhibitor protein Gfh1 0.9789 82 153 GO:0003677
GO:0006354
GO:0032784
GO:0070063
AF-F2NC71-F1-model_v4 GreA/GreB family elongation factor 0.9781 1 154 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A6B0WC19-F1-model_v4 Transcription elongation factor GreA 0.9767 82 153 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063

Feature Viewer

pLDDT pTM Quality
89.38 0.72 High
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Predicted Structure (AlphaFold2)

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