F369623

General Info

Members Datasets Scaffolds Average Seq Length
260 166 254 359

Family's Representative Sequence

Representative Sequence 3300026088|Ga0207641_10377114|Ga0207641_103771141
Length 402
Sequence MTHLVIMAAGTGGHIIPGLAVAREMQQRGWTVSWLGTAQGMENRLVPPAGIEMDTLAFSGLRGKGLAHTLTGGAKLLKAFWDAARILRRRRADAVLGMGGYVCFPGGMMASLLGKPLMLVNADASLLMSNRALMPVADRVAFGFDGEAAASTRRAVVTGNPVRAEIEALPAPAQRFAGRGGPLSVLVVGGSLGAKALNDSLPQALAMIPLPLRPRVTHQTGPAQFDDVRAAYQRVGVDAEVLPFIDDMARRLAECDVIVCRAGAVTVSELCVAGVASVLVPLVVSTTAHQRDNARLMARRRAALHLPQDELTPSRLSELLANLQREDLLSMAEHARALGRPHAAARVADEIERLVSKKKGGKDLPLNPMKAAESVPQALNGPAPSQASGRTGDRQTRMGKMA

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
3 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
4 2643221660 Methylibium sp. Root1272 Isolate Unclassified
5 2831864461 Roseateles noduli HZ7 Isolate Nodule
6 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
41 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
103 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
112 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
116 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
121 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
122 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
123 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
124 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
125 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
131 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
134 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
139 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
140 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
159 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
164 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
165 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
166 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.69
Metatranscriptomes 0
Isolates 2.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20
Nodule 1.54
Rhizoplane 3.85
Rhizosphere 59.62
Stem 0
Stem Tuber 0
Unclassified 15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10004835 3300003215 Bacteria 7177
2 Ga0055526_1001991 3300003771 Bacteria 14078
3 Ga0055524_1017547 3300003775 Bacteria 2522
4 Ga0065165_1000101 3300005262 Bacteria 141486
5 Ga0065165_1003865 3300005262 Bacteria 9941
6 Ga0065707_10009203 3300005295 Bacteria 4712
7 Ga0065707_10094070 3300005295 Bacteria 3543
8 Ga0070676_10012726 3300005328 Bacteria 4600
9 Ga0070676_10032511 3300005328 Bacteria 2989
10 Ga0070669_100018528 3300005353 Bacteria 4974
11 Ga0070669_100048399 3300005353 Bacteria 3103
12 Ga0070675_100182717 3300005354 Bacteria 1814
13 Ga0070675_100224849 3300005354 Bacteria 1636
14 Ga0070671_100058158 3300005355 Bacteria 3219
15 Ga0070673_100113960 3300005364 Bacteria 2246
16 Ga0070659_100000579 3300005366 Bacteria 26725
17 Ga0070667_100028659 3300005367 Bacteria 4637
18 Ga0070667_100277981 3300005367 Bacteria 1503
19 Ga0070667_100381751 3300005367 Bacteria 1280
20 Ga0070678_100031947 3300005456 Bacteria 3638
21 Ga0068867_100000072 3300005459 Bacteria 61663
22 Ga0068867_100016607 3300005459 Bacteria 5227
23 Ga0070706_100003148 3300005467 Bacteria 16310
24 Ga0070707_100130231 3300005468 Bacteria 2446
25 Ga0070672_100017257 3300005543 Bacteria 5190
26 Ga0068857_100145641 3300005577 Bacteria 2143
27 Ga0068859_100149635 3300005617 Bacteria 2410
28 Ga0068859_100383027 3300005617 Bacteria 1502
29 Ga0068866_10005632 3300005718 Bacteria 5185
30 Ga0068861_100030014 3300005719 Bacteria 3982
31 Ga0068863_100051637 3300005841 Bacteria 3896
32 Ga0068863_100097372 3300005841 Bacteria 2794
33 Ga0068863_100155056 3300005841 Bacteria 2193
34 Ga0068858_100057813 3300005842 Bacteria 3584
35 Ga0068860_100000590 3300005843 Bacteria 43453
36 Ga0068862_100014282 3300005844 Bacteria 6587
37 Ga0068862_100210737 3300005844 Bacteria 1756
38 Ga0081455_10000550 3300005937 Bacteria 48753
39 Ga0081538_10003786 3300005981 Bacteria 14147
40 Ga0075363_100033680 3300006048 Bacteria 2670
41 Ga0075362_10009522 3300006177 Bacteria 3760
42 Ga0075366_10008469 3300006195 Bacteria 5720
43 Ga0075366_10042839 3300006195 Bacteria 2680
44 Ga0075366_10046444 3300006195 Bacteria 2573
45 Ga0075366_10168261 3300006195 Bacteria 1330
46 Ga0075370_10000547 3300006353 Bacteria 14418
47 Ga0075370_10002604 3300006353 Bacteria 8412
48 Ga0075370_10029308 3300006353 Bacteria 3065
49 Ga0075370_10036456 3300006353 Bacteria 2762
50 Ga0075370_10052829 3300006353 Bacteria 2306
51 Ga0075370_10066118 3300006353 Bacteria 2062
52 Ga0068865_100008370 3300006881 Bacteria 6392
53 Ga0097620_100149638 3300006931 Bacteria 2410
54 Ga0097620_100383015 3300006931 Bacteria 1502
55 Ga0099824_1035397 3300006942 Bacteria 1525
56 Ga0099823_1000108 3300006944 Bacteria 41193
57 Ga0105240_10022541 3300009093 Bacteria 8345
58 Ga0105245_10023699 3300009098 Bacteria 5388
59 Ga0114129_10098328 3300009147 Bacteria 4051
60 Ga0105243_10001108 3300009148 Bacteria 24452
61 Ga0105248_10000507 3300009177 Bacteria 44310
62 Ga0105237_10003214 3300009545 Bacteria 19566
63 Ga0105238_10018739 3300009551 Bacteria 7049
64 Ga0105249_10030717 3300009553 Bacteria 4858
65 Ga0105239_10003443 3300010375 Bacteria 19378
66 Ga0105246_10219184 3300011119 Bacteria 1490
67 Ga0157319_1000008 3300012497 Bacteria 315600
68 Ga0157378_10008627 3300013297 Bacteria 8870
69 Ga0163162_10002118 3300013306 Bacteria 18641
70 Ga0157375_10205843 3300013308 Bacteria 2124
71 Ga0163163_10387482 3300014325 Bacteria 1455
72 Ga0157380_10148911 3300014326 Bacteria 2021
73 Ga0157380_10353791 3300014326 Bacteria 1375
74 Ga0157377_10000075 3300014745 Bacteria 76405
75 Ga0157379_10030374 3300014968 Bacteria 4809
76 Ga0157379_10278344 3300014968 Bacteria 1522
77 Ga0163161_10063793 3300017792 Bacteria 2686
78 Ga0163161_10091716 3300017792 Bacteria 2249
79 Ga0213872_10000007 3300021361 Bacteria 228206
80 Ga0209258_104691 3300025242 Bacteria 2515
81 Ga0209673_1003881 3300025273 Bacteria 8425
82 Ga0209564_1000008 3300025295 Bacteria 953227
83 Ga0209758_1002249 3300025297 Bacteria 20036
84 Ga0209050_1001274 3300025298 Bacteria 28926
85 Ga0209050_1001765 3300025298 Bacteria 21356
86 Ga0209256_1000413 3300025299 Bacteria 67123
87 Ga0209256_1004094 3300025299 Bacteria 9449
88 Ga0209051_1000752 3300025303 Bacteria 34790
89 Ga0209257_1005624 3300025304 Bacteria 8678
90 Ga0207682_10095285 3300025893 Bacteria 1296
91 Ga0207645_10002795 3300025907 Bacteria 13587
92 Ga0207645_10208911 3300025907 Bacteria 1285
93 Ga0207643_10011054 3300025908 Bacteria 4872
94 Ga0207684_10003773 3300025910 Bacteria 14639
95 Ga0207684_10189933 3300025910 Bacteria 1772
96 Ga0207695_10048196 3300025913 Bacteria 4501
97 Ga0207671_10002520 3300025914 Bacteria 19532
98 Ga0207657_10118717 3300025919 Bacteria 2177
99 Ga0207649_10001310 3300025920 Bacteria 14847
100 Ga0207681_10016551 3300025923 Bacteria 4615
101 Ga0207650_10080297 3300025925 Bacteria 2472
102 Ga0207659_10042908 3300025926 Bacteria 3173
103 Ga0207687_10147377 3300025927 Bacteria 1792
104 Ga0207687_10154373 3300025927 Bacteria 1755
105 Ga0207644_10086027 3300025931 Bacteria 2333
106 Ga0207690_10096493 3300025932 Bacteria 2102
107 Ga0207706_10168400 3300025933 Bacteria 1925
108 Ga0207709_10000625 3300025935 Bacteria 29011
109 Ga0207709_10211954 3300025935 Bacteria 1391
110 Ga0207669_10027007 3300025937 Bacteria 3134
111 Ga0207704_10001522 3300025938 Bacteria 10396
112 Ga0207691_10012766 3300025940 Bacteria 8042
113 Ga0207691_10016738 3300025940 Bacteria 6961
114 Ga0207711_10008341 3300025941 Bacteria 8672
115 Ga0207689_10215515 3300025942 Bacteria 1586
116 Ga0207679_10000730 3300025945 Bacteria 21864
117 Ga0207712_10080008 3300025961 Bacteria 2376
118 Ga0207658_10007685 3300025986 Bacteria 7342
119 Ga0207658_10041791 3300025986 Bacteria 3322
120 Ga0207703_10177669 3300026035 Bacteria 1877
121 Ga0207639_10234991 3300026041 Bacteria 1591
122 Ga0207708_10027830 3300026075 Bacteria 4281
123 Ga0207641_10074766 3300026088 Bacteria 2924
124 Ga0207641_10280147 3300026088 Bacteria 1568
125 Ga0207641_10377114 3300026088 Bacteria 1357
126 Ga0207648_10000286 3300026089 Bacteria 54985
127 Ga0207648_10000878 3300026089 Bacteria 33868
128 Ga0207648_10008332 3300026089 Bacteria 10058
129 Ga0207674_10041256 3300026116 Bacteria 4774
130 Ga0207675_100001900 3300026118 Bacteria 20834
131 Ga0207683_10072244 3300026121 Bacteria 3051
132 Ga0209389_1048298 3300027296 Bacteria 3027
133 Ga0209966_1000035 3300027695 Bacteria 56067
134 Ga0268265_10105316 3300028380 Bacteria 2288
135 Ga0268264_10000991 3300028381 Bacteria 28937
136 Ga0268264_10046766 3300028381 Bacteria 3595
137 Ga0268264_10238298 3300028381 Bacteria 1684
138 Ga0307517_10000131 3300028786 Bacteria 113233
139 Ga0307517_10087870 3300028786 Bacteria 2577
140 Ga0307517_10139719 3300028786 Bacteria 1706
141 Ga0307515_10000011 3300028794 Bacteria 633903
142 Ga0307515_10000382 3300028794 Bacteria 107907
143 Ga0307515_10006352 3300028794 Bacteria 23656
144 Ga0307515_10028588 3300028794 Bacteria 9473
145 Ga0307515_10031517 3300028794 Bacteria 8835
146 Ga0307515_10035182 3300028794 Bacteria 8160
147 Ga0307515_10037795 3300028794 Bacteria 7745
148 Ga0307515_10114232 3300028794 Bacteria 3123
149 Ga0307515_10184967 3300028794 Bacteria 2017
150 Ga0307515_10222652 3300028794 Bacteria 1700
151 Ga0307513_10046213 3300031456 Bacteria 4750
152 Ga0307513_10147223 3300031456 Bacteria 2271
153 Ga0307509_10000871 3300031507 Bacteria 52060
154 Ga0307509_10105908 3300031507 Bacteria 2832
155 Ga0307509_10108232 3300031507 Bacteria 2793
156 Ga0307509_10114851 3300031507 Bacteria 2686
157 Ga0307509_10163255 3300031507 Bacteria 2121
158 Ga0307508_10000123 3300031616 Bacteria 92439
159 Ga0307508_10000349 3300031616 Bacteria 56002
160 Ga0307514_10000355 3300031649 Bacteria 106758
161 Ga0307514_10037729 3300031649 Bacteria 3828
162 Ga0307514_10142008 3300031649 Bacteria 1630
163 Ga0307516_10001568 3300031730 Bacteria 31474
164 Ga0307516_10004605 3300031730 Bacteria 16911
165 Ga0307412_10025417 3300031911 Bacteria 3669
166 Ga0307510_10008226 3300033180 Bacteria 12423
167 Ga0307510_10068947 3300033180 Bacteria 3545
168 Ga0307510_10081115 3300033180 Bacteria 3148
169 Ga0307510_10226580 3300033180 Bacteria 1376
170 Ga0373939_0018526 3300035114 Bacteria 1867
171 Ga0373931_0013883 3300035691 Bacteria 3930
172 Ga0373925_0026103 3300037068 Bacteria 4272
173 Ga0373925_0230255 3300037068 Bacteria 1481
174 Ga0395905_0076308 3300037471 Bacteria 3141
175 Ga0395905_0081557 3300037471 Bacteria 3031
176 Ga0395905_0177494 3300037471 Bacteria 1999
177 Ga0436361_0163583 3300039447 Bacteria 173204
178 Ga0436361_0948650 3300039447 Bacteria 1902
179 Ga0451800_0979261 3300041459 Bacteria 1535
180 Ga0439462_0017501 3300042015 Bacteria 1856
181 Ga0450911_001146 3300042115 Bacteria 6532
182 Ga0450898_009301 3300042134 Bacteria 1570
183 Ga0450898_024489 3300042134 Bacteria 1079
184 Ga0439459_0000487 3300042438 Bacteria 5186
185 Ga0439464_0043113 3300042439 Bacteria 1289
186 Ga0451577_0013180 3300042876 Bacteria 7747
187 Ga0451577_0019182 3300042876 Bacteria 6290
188 Ga0451577_0208637 3300042876 Bacteria 1764
189 Ga0451577_0339070 3300042876 Bacteria 1363
190 Ga0451577_0503475 3300042876 Bacteria 1100
191 Ga0466963_0055262 3300044694 Bacteria 2640
192 Ga0466963_0131695 3300044694 Bacteria 1728
193 Ga0453684_0027299 3300044712 Bacteria 8193
194 Ga0453684_0110829 3300044712 Bacteria 3335
195 Ga0453684_0445953 3300044712 Bacteria 1441
196 Ga0451576_0081729 3300045051 Bacteria 3360
197 Ga0495592_0000394 3300046454 Bacteria 33973
198 Ga0495590_0005408 3300046457 Bacteria 5071
199 Ga0495650_0074083 3300046471 Bacteria 1328
200 Ga0495632_0026738 3300046519 Bacteria 3032
201 Ga0495632_0079536 3300046519 Bacteria 1565
202 Ga0495621_0033051 3300046539 Bacteria 1781
203 Ga0495625_0012769 3300046660 Bacteria 6793
204 Ga0495625_0074209 3300046660 Bacteria 2383
205 Ga0495625_0075302 3300046660 Bacteria 2362
206 Ga0495646_0068315 3300046680 Bacteria 2098
207 Ga0495658_0187999 3300046683 Bacteria 1283
208 Ga0495669_0126998 3300046684 Bacteria 1199
209 Ga0495624_0039462 3300046690 Bacteria 3027
210 Ga0495649_0033239 3300046694 Bacteria 2839
211 Ga0495687_003988 3300047443 Bacteria 10280
212 Ga0495686_0016638 3300047472 Bacteria 4980
213 Ga0495593_0087710 3300047673 Bacteria 1604
214 Ga0496102_0025715 3300048905 Bacteria 5243
215 Ga0496102_0297486 3300048905 Bacteria 1521
216 Ga0496105_0196660 3300048908 Bacteria 1647
217 Ga0496108_0229753 3300048911 Bacteria 1613
218 Ga0496109_0246095 3300048912 Bacteria 1683
219 Ga0496110_0037952 3300048913 Bacteria 4189
220 Ga0496112_0009399 3300048915 Bacteria 8804
221 Ga0496113_0048417 3300048916 Bacteria 3162
222 Ga0496113_0222062 3300048916 Bacteria 1506
223 Ga0496124_0025212 3300048927 Bacteria 5389
224 Ga0496124_0096578 3300048927 Bacteria 2400
225 Ga0496125_0013437 3300048928 Bacteria 8046
226 Ga0496125_0050477 3300048928 Bacteria 3444
227 Ga0496125_0232228 3300048928 Bacteria 1178
228 Ga0496126_0060069 3300048929 Bacteria 3421
229 Ga0501047_0291387 3300049581 Bacteria 1476
230 nmdc:mga0k408_14868_c1 3300050493 Bacteria 4297
231 nmdc:mga0k408_18125_c1 3300050493 Bacteria 3927
232 nmdc:mga0k408_40163_c1 3300050493 Bacteria 2691
233 nmdc:mga0k408_64150_c1 3300050493 Bacteria 2138
234 nmdc:mga0k408_71911_c1 3300050493 Bacteria 2019
235 nmdc:mga0k408_73904_c1 3300050493 Bacteria 1992
236 nmdc:mga06z11_78793_c1 3300050494 Bacteria 1762
237 nmdc:mga07m45_104997_c1 3300050496 Bacteria 1625
238 nmdc:mga07m45_131188_c1 3300050496 Bacteria 1450
239 nmdc:mga07m45_20764_c2 3300050496 Bacteria 2986
240 nmdc:mga07m45_25817_c1 3300050496 Bacteria 3225
241 nmdc:mga07m45_32500_c1 3300050496 Bacteria 2894
242 nmdc:mga07m45_81_c1 3300050496 Bacteria 35778
243 Ga0500578_0000652 3300053086 Bacteria 41736
244 Ga0500578_0099028 3300053086 Bacteria 1846
245 Ga0500651_0123508 3300053093 Bacteria 1570
246 Ga0500562_030343 3300053108 Bacteria 1424
247 Ga0500594_0009722 3300053118 Bacteria 2219
248 Ga0500559_0000446 3300053136 Bacteria 29360
249 Ga0500568_0003542 3300053139 Bacteria 8648
250 Ga0500568_0073072 3300053139 Bacteria 1310
251 Ga0500586_093815 3300053145 Bacteria 1053
252 Ga0500590_002813 3300053148 Bacteria 7859
253 Ga0500622_0004516 3300053156 Bacteria 8701
254 Ga0500622_0009123 3300053156 Bacteria 5505

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053145 Ga0500586_093815 Ga0500586_093815_48_1001 303
2 3300042876 Ga0451577_0503475 Ga0451577_0503475_92_1045 316
3 3300048928 Ga0496125_0232228 Ga0496125_0232228_212_1165 316
4 3300042134 Ga0450898_024489 Ga0450898_024489_86_1066 325
5 3300050493 nmdc:mga0k408_71911_c1 nmdc:mga0k408_71911_c1_1003_2004 332
6 3300050496 nmdc:mga07m45_131188_c1 nmdc:mga07m45_131188_c1_431_1432 332
7 3300005937 Ga0081455_10000550 Ga0081455_1000055021 337
8 3300046457 Ga0495590_0005408 Ga0495590_0005408_1371_2456 341
9 3300005456 Ga0070678_100031947 Ga0070678_1000319473 342
10 3300025913 Ga0207695_10048196 Ga0207695_100481964 342
11 3300025914 Ga0207671_10002520 Ga0207671_1000252012 342
12 3300031911 Ga0307412_10025417 Ga0307412_100254172 342
13 3300053108 Ga0500562_030343 Ga0500562_030343_10_1083 342
14 3300037471 Ga0395905_0081557 Ga0395905_0081557_959_2044 343
15 3300049581 Ga0501047_0291387 Ga0501047_0291387_154_1254 344
16 3300005353 Ga0070669_100018528 Ga0070669_1000185282 345
17 3300005354 Ga0070675_100224849 Ga0070675_1002248491 345
18 3300005364 Ga0070673_100113960 Ga0070673_1001139602 345
19 3300025893 Ga0207682_10095285 Ga0207682_100952851 345
20 3300025923 Ga0207681_10016551 Ga0207681_100165515 345
21 3300025925 Ga0207650_10080297 Ga0207650_100802972 345
22 3300025926 Ga0207659_10042908 Ga0207659_100429082 345
23 3300025940 Ga0207691_10016738 Ga0207691_100167384 345
24 3300026121 Ga0207683_10072244 Ga0207683_100722442 345
25 3300042439 Ga0439464_0043113 Ga0439464_0043113_22_1080 345
26 3300046539 Ga0495621_0033051 Ga0495621_0033051_213_1310 345
27 3300037471 Ga0395905_0076308 Ga0395905_0076308_72_1157 347
28 3300005295 Ga0065707_10009203 Ga0065707_100092034 348
29 3300005981 Ga0081538_10003786 Ga0081538_1000378612 348
30 3300009093 Ga0105240_10022541 Ga0105240_100225416 350
31 3300009545 Ga0105237_10003214 Ga0105237_100032147 350
32 3300009551 Ga0105238_10018739 Ga0105238_100187391 350
33 3300010375 Ga0105239_10003443 Ga0105239_100034437 350
34 3300037068 Ga0373925_0230255 Ga0373925_0230255_106_1161 350
35 3300041459 Ga0451800_0979261 Ga0451800_0979261_63_1130 350
36 3300044712 Ga0453684_0110829 Ga0453684_0110829_1995_3050 350
37 3300048928 Ga0496125_0050477 Ga0496125_0050477_327_1385 350
38 3300048929 Ga0496126_0060069 Ga0496126_0060069_2059_3114 350
39 3300053139 Ga0500568_0003542 Ga0500568_0003542_5882_6970 350
40 3300053139 Ga0500568_0073072 Ga0500568_0073072_238_1293 350
41 iso_pu_bacteria 2643221654 2644303041 352
42 iso_pu_bacteria 2588253510 2588295026 353
43 iso_pu_bacteria 2831864461 2831869142 353
44 iso_pu_bacteria 2886848708 2886850925 353
45 iso_pu_bacteria 2643221660 2644340822 354
46 3300005328 Ga0070676_10012726 Ga0070676_100127264 356
47 3300005354 Ga0070675_100182717 Ga0070675_1001827171 356
48 3300005367 Ga0070667_100028659 Ga0070667_1000286594 356
49 3300005459 Ga0068867_100016607 Ga0068867_1000166071 356
50 3300005577 Ga0068857_100145641 Ga0068857_1001456412 356
51 3300005841 Ga0068863_100051637 Ga0068863_1000516374 356
52 3300005841 Ga0068863_100155056 Ga0068863_1001550563 356
53 3300009098 Ga0105245_10023699 Ga0105245_100236992 356
54 3300009147 Ga0114129_10098328 Ga0114129_100983282 356
55 3300011119 Ga0105246_10219184 Ga0105246_102191842 356
56 3300013308 Ga0157375_10205843 Ga0157375_102058432 356
57 3300014325 Ga0163163_10387482 Ga0163163_103874822 356
58 3300014326 Ga0157380_10148911 Ga0157380_101489112 356
59 3300014968 Ga0157379_10278344 Ga0157379_102783442 356
60 3300017792 Ga0163161_10091716 Ga0163161_100917162 356
61 3300025907 Ga0207645_10002795 Ga0207645_1000279511 356
62 3300025908 Ga0207643_10011054 Ga0207643_100110543 356
63 3300025927 Ga0207687_10147377 Ga0207687_101473772 356
64 3300025927 Ga0207687_10154373 Ga0207687_101543732 356
65 3300025933 Ga0207706_10168400 Ga0207706_101684002 356
66 3300025942 Ga0207689_10215515 Ga0207689_102155151 356
67 3300025986 Ga0207658_10007685 Ga0207658_100076854 356
68 3300026041 Ga0207639_10234991 Ga0207639_102349911 356
69 3300026088 Ga0207641_10280147 Ga0207641_102801472 356
70 3300026088 Ga0207641_10377114 Ga0207641_103771141 356
71 3300026089 Ga0207648_10000878 Ga0207648_1000087828 356
72 3300026116 Ga0207674_10041256 Ga0207674_100412563 356
73 3300028381 Ga0268264_10238298 Ga0268264_102382982 356
74 3300028786 Ga0307517_10000131 Ga0307517_1000013128 356
75 3300028786 Ga0307517_10087870 Ga0307517_100878702 356
76 3300028794 Ga0307515_10000011 Ga0307515_10000011245 356
77 3300028794 Ga0307515_10000382 Ga0307515_10000382105 356
78 3300028794 Ga0307515_10028588 Ga0307515_100285886 356
79 3300028794 Ga0307515_10031517 Ga0307515_100315172 356
80 3300028794 Ga0307515_10035182 Ga0307515_100351824 356
81 3300028794 Ga0307515_10184967 Ga0307515_101849673 356
82 3300028794 Ga0307515_10222652 Ga0307515_102226522 356
83 3300031456 Ga0307513_10046213 Ga0307513_100462132 356
84 3300031456 Ga0307513_10147223 Ga0307513_101472232 356
85 3300031507 Ga0307509_10105908 Ga0307509_101059082 356
86 3300031507 Ga0307509_10108232 Ga0307509_101082322 356
87 3300031507 Ga0307509_10114851 Ga0307509_101148512 356
88 3300031507 Ga0307509_10163255 Ga0307509_101632553 356
89 3300031616 Ga0307508_10000349 Ga0307508_1000034927 356
90 3300031649 Ga0307514_10142008 Ga0307514_101420083 356
91 3300035691 Ga0373931_0013883 Ga0373931_0013883_1729_2802 356
92 3300042115 Ga0450911_001146 Ga0450911_001146_5055_6134 356
93 3300042876 Ga0451577_0013180 Ga0451577_0013180_1703_2782 356
94 3300042876 Ga0451577_0208637 Ga0451577_0208637_418_1488 356
95 3300042876 Ga0451577_0339070 Ga0451577_0339070_52_1143 356
96 3300044712 Ga0453684_0445953 Ga0453684_0445953_273_1364 356
97 3300045051 Ga0451576_0081729 Ga0451576_0081729_1927_2997 356
98 3300046471 Ga0495650_0074083 Ga0495650_0074083_38_1111 356
99 3300046519 Ga0495632_0079536 Ga0495632_0079536_271_1347 356
100 3300046660 Ga0495625_0074209 Ga0495625_0074209_1215_2291 356
101 3300046684 Ga0495669_0126998 Ga0495669_0126998_86_1159 356
102 3300046690 Ga0495624_0039462 Ga0495624_0039462_828_1901 356
103 3300047673 Ga0495593_0087710 Ga0495593_0087710_424_1497 356
104 3300048912 Ga0496109_0246095 Ga0496109_0246095_377_1483 356
105 3300048913 Ga0496110_0037952 Ga0496110_0037952_1129_2235 356
106 3300048916 Ga0496113_0222062 Ga0496113_0222062_340_1413 356
107 3300048927 Ga0496124_0025212 Ga0496124_0025212_3619_4692 356
108 3300048928 Ga0496125_0013437 Ga0496125_0013437_5301_6377 356
109 3300053086 Ga0500578_0099028 Ga0500578_0099028_465_1535 356
110 iso_pu_bacteria 2585428057 2587728308 356
111 3300003771 Ga0055526_1001991 Ga0055526_10019913 357
112 3300003775 Ga0055524_1017547 Ga0055524_10175472 357
113 3300005262 Ga0065165_1000101 Ga0065165_1000101106 357
114 3300005262 Ga0065165_1003865 Ga0065165_10038653 357
115 3300005355 Ga0070671_100058158 Ga0070671_1000581582 357
116 3300005367 Ga0070667_100277981 Ga0070667_1002779812 357
117 3300006048 Ga0075363_100033680 Ga0075363_1000336802 357
118 3300006177 Ga0075362_10009522 Ga0075362_100095222 357
119 3300006353 Ga0075370_10002604 Ga0075370_100026043 357
120 3300006353 Ga0075370_10029308 Ga0075370_100293083 357
121 3300006353 Ga0075370_10052829 Ga0075370_100528291 357
122 3300006353 Ga0075370_10066118 Ga0075370_100661182 357
123 3300006942 Ga0099824_1035397 Ga0099824_10353972 357
124 3300006944 Ga0099823_1000108 Ga0099823_100010819 357
125 3300009177 Ga0105248_10000507 Ga0105248_1000050716 357
126 3300012497 Ga0157319_1000008 Ga0157319_1000008102 357
127 3300021361 Ga0213872_10000007 Ga0213872_10000007181 357
128 3300025242 Ga0209258_104691 Ga0209258_1046912 357
129 3300025273 Ga0209673_1003881 Ga0209673_10038812 357
130 3300025295 Ga0209564_1000008 Ga0209564_1000008633 357
131 3300025298 Ga0209050_1001274 Ga0209050_10012745 357
132 3300025299 Ga0209256_1000413 Ga0209256_10004134 357
133 3300025299 Ga0209256_1004094 Ga0209256_10040945 357
134 3300025303 Ga0209051_1000752 Ga0209051_10007522 357
135 3300025304 Ga0209257_1005624 Ga0209257_10056243 357
136 3300025907 Ga0207645_10208911 Ga0207645_102089111 357
137 3300025931 Ga0207644_10086027 Ga0207644_100860272 357
138 3300025935 Ga0207709_10211954 Ga0207709_102119541 357
139 3300025941 Ga0207711_10008341 Ga0207711_100083416 357
140 3300027296 Ga0209389_1048298 Ga0209389_10482982 357
141 3300027695 Ga0209966_1000035 Ga0209966_100003514 357
142 3300028794 Ga0307515_10006352 Ga0307515_1000635211 357
143 3300028794 Ga0307515_10114232 Ga0307515_101142323 357
144 3300031507 Ga0307509_10000871 Ga0307509_1000087143 357
145 3300031649 Ga0307514_10037729 Ga0307514_100377292 357
146 3300031730 Ga0307516_10001568 Ga0307516_1000156816 357
147 3300033180 Ga0307510_10008226 Ga0307510_100082264 357
148 3300033180 Ga0307510_10068947 Ga0307510_100689473 357
149 3300033180 Ga0307510_10081115 Ga0307510_100811153 357
150 3300039447 Ga0436361_0163583 Ga0436361_0163583_47706_48782 357
151 3300042438 Ga0439459_0000487 Ga0439459_0000487_1204_2322 357
152 3300042876 Ga0451577_0019182 Ga0451577_0019182_73_1146 357
153 3300044694 Ga0466963_0055262 Ga0466963_0055262_417_1535 357
154 3300044694 Ga0466963_0131695 Ga0466963_0131695_331_1449 357
155 3300046454 Ga0495592_0000394 Ga0495592_0000394_30287_31363 357
156 3300046680 Ga0495646_0068315 Ga0495646_0068315_111_1187 357
157 3300048905 Ga0496102_0297486 Ga0496102_0297486_379_1503 357
158 3300048908 Ga0496105_0196660 Ga0496105_0196660_439_1563 357
159 3300048911 Ga0496108_0229753 Ga0496108_0229753_299_1423 357
160 3300048915 Ga0496112_0009399 Ga0496112_0009399_1179_2303 357
161 3300048916 Ga0496113_0048417 Ga0496113_0048417_1761_2885 357
162 3300048927 Ga0496124_0096578 Ga0496124_0096578_304_1422 357
163 3300050493 nmdc:mga0k408_40163_c1 nmdc:mga0k408_40163_c1_310_1386 357
164 3300050493 nmdc:mga0k408_73904_c1 nmdc:mga0k408_73904_c1_281_1357 357
165 3300050494 nmdc:mga06z11_78793_c1 nmdc:mga06z11_78793_c1_289_1365 357
166 3300050496 nmdc:mga07m45_104997_c1 nmdc:mga07m45_104997_c1_42_1118 357
167 3300050496 nmdc:mga07m45_20764_c2 nmdc:mga07m45_20764_c2_367_1443 357
168 3300050496 nmdc:mga07m45_25817_c1 nmdc:mga07m45_25817_c1_537_1655 357
169 3300053093 Ga0500651_0123508 Ga0500651_0123508_180_1256 357
170 3300053118 Ga0500594_0009722 Ga0500594_0009722_321_1397 357
171 3300053136 Ga0500559_0000446 Ga0500559_0000446_5051_6127 357
172 3300053148 Ga0500590_002813 Ga0500590_002813_3233_4309 357
173 3300053156 Ga0500622_0004516 Ga0500622_0004516_1823_2932 357
174 3300053156 Ga0500622_0009123 Ga0500622_0009123_2991_4067 357
175 3300003215 JGI25153J46596_10004835 JGI25153J46596_100048355 358
176 3300005295 Ga0065707_10094070 Ga0065707_100940702 358
177 3300005328 Ga0070676_10032511 Ga0070676_100325112 358
178 3300005353 Ga0070669_100048399 Ga0070669_1000483991 358
179 3300005366 Ga0070659_100000579 Ga0070659_1000005792 358
180 3300005367 Ga0070667_100381751 Ga0070667_1003817512 358
181 3300005459 Ga0068867_100000072 Ga0068867_10000007244 358
182 3300005467 Ga0070706_100003148 Ga0070706_10000314811 358
183 3300005468 Ga0070707_100130231 Ga0070707_1001302312 358
184 3300005543 Ga0070672_100017257 Ga0070672_1000172572 358
185 3300005617 Ga0068859_100149635 Ga0068859_1001496353 358
186 3300005617 Ga0068859_100383027 Ga0068859_1003830272 358
187 3300005718 Ga0068866_10005632 Ga0068866_100056323 358
188 3300005719 Ga0068861_100030014 Ga0068861_1000300143 358
189 3300005841 Ga0068863_100097372 Ga0068863_1000973723 358
190 3300005842 Ga0068858_100057813 Ga0068858_1000578133 358
191 3300005843 Ga0068860_100000590 Ga0068860_10000059016 358
192 3300005844 Ga0068862_100014282 Ga0068862_1000142823 358
193 3300005844 Ga0068862_100210737 Ga0068862_1002107372 358
194 3300006195 Ga0075366_10008469 Ga0075366_100084692 358
195 3300006195 Ga0075366_10042839 Ga0075366_100428392 358
196 3300006195 Ga0075366_10046444 Ga0075366_100464442 358
197 3300006195 Ga0075366_10168261 Ga0075366_101682612 358
198 3300006353 Ga0075370_10000547 Ga0075370_100005479 358
199 3300006353 Ga0075370_10036456 Ga0075370_100364561 358
200 3300006881 Ga0068865_100008370 Ga0068865_1000083704 358
201 3300006931 Ga0097620_100149638 Ga0097620_1001496383 358
202 3300006931 Ga0097620_100383015 Ga0097620_1003830152 358
203 3300009148 Ga0105243_10001108 Ga0105243_1000110814 358
204 3300009553 Ga0105249_10030717 Ga0105249_100307172 358
205 3300013297 Ga0157378_10008627 Ga0157378_100086275 358
206 3300013306 Ga0163162_10002118 Ga0163162_100021187 358
207 3300014326 Ga0157380_10353791 Ga0157380_103537912 358
208 3300014745 Ga0157377_10000075 Ga0157377_1000007548 358
209 3300014968 Ga0157379_10030374 Ga0157379_100303742 358
210 3300017792 Ga0163161_10063793 Ga0163161_100637933 358
211 3300025297 Ga0209758_1002249 Ga0209758_10022496 358
212 3300025298 Ga0209050_1001765 Ga0209050_100176515 358
213 3300025910 Ga0207684_10003773 Ga0207684_1000377311 358
214 3300025910 Ga0207684_10189933 Ga0207684_101899332 358
215 3300025919 Ga0207657_10118717 Ga0207657_101187172 358
216 3300025920 Ga0207649_10001310 Ga0207649_100013102 358
217 3300025932 Ga0207690_10096493 Ga0207690_100964932 358
218 3300025935 Ga0207709_10000625 Ga0207709_1000062516 358
219 3300025937 Ga0207669_10027007 Ga0207669_100270074 358
220 3300025938 Ga0207704_10001522 Ga0207704_100015222 358
221 3300025940 Ga0207691_10012766 Ga0207691_100127664 358
222 3300025945 Ga0207679_10000730 Ga0207679_100007303 358
223 3300025961 Ga0207712_10080008 Ga0207712_100800082 358
224 3300025986 Ga0207658_10041791 Ga0207658_100417913 358
225 3300026035 Ga0207703_10177669 Ga0207703_101776692 358
226 3300026075 Ga0207708_10027830 Ga0207708_100278304 358
227 3300026088 Ga0207641_10074766 Ga0207641_100747662 358
228 3300026089 Ga0207648_10000286 Ga0207648_1000028618 358
229 3300026089 Ga0207648_10008332 Ga0207648_100083325 358
230 3300026118 Ga0207675_100001900 Ga0207675_10000190016 358
231 3300028380 Ga0268265_10105316 Ga0268265_101053162 358
232 3300028381 Ga0268264_10000991 Ga0268264_1000099113 358
233 3300028381 Ga0268264_10046766 Ga0268264_100467663 358
234 3300028786 Ga0307517_10139719 Ga0307517_101397192 358
235 3300028794 Ga0307515_10037795 Ga0307515_100377956 358
236 3300031616 Ga0307508_10000123 Ga0307508_100001231 358
237 3300031649 Ga0307514_10000355 Ga0307514_1000035556 358
238 3300031730 Ga0307516_10004605 Ga0307516_100046059 358
239 3300033180 Ga0307510_10226580 Ga0307510_102265802 358
240 3300035114 Ga0373939_0018526 Ga0373939_0018526_85_1170 358
241 3300037068 Ga0373925_0026103 Ga0373925_0026103_1706_2785 358
242 3300037471 Ga0395905_0177494 Ga0395905_0177494_347_1426 358
243 3300039447 Ga0436361_0948650 Ga0436361_0948650_169_1248 358
244 3300042015 Ga0439462_0017501 Ga0439462_0017501_600_1757 358
245 3300042134 Ga0450898_009301 Ga0450898_009301_69_1235 358
246 3300044712 Ga0453684_0027299 Ga0453684_0027299_3977_5056 358
247 3300046519 Ga0495632_0026738 Ga0495632_0026738_1098_2177 358
248 3300046660 Ga0495625_0012769 Ga0495625_0012769_1947_3044 358
249 3300046660 Ga0495625_0075302 Ga0495625_0075302_31_1110 358
250 3300046683 Ga0495658_0187999 Ga0495658_0187999_150_1229 358
251 3300046694 Ga0495649_0033239 Ga0495649_0033239_868_1947 358
252 3300047443 Ga0495687_003988 Ga0495687_003988_4333_5412 358
253 3300047472 Ga0495686_0016638 Ga0495686_0016638_3516_4595 358
254 3300048905 Ga0496102_0025715 Ga0496102_0025715_3715_4794 358
255 3300050493 nmdc:mga0k408_14868_c1 nmdc:mga0k408_14868_c1_457_1536 358
256 3300050493 nmdc:mga0k408_18125_c1 nmdc:mga0k408_18125_c1_2220_3299 358
257 3300050493 nmdc:mga0k408_64150_c1 nmdc:mga0k408_64150_c1_273_1355 358
258 3300050496 nmdc:mga07m45_32500_c1 nmdc:mga07m45_32500_c1_1504_2583 358
259 3300050496 nmdc:mga07m45_81_c1 nmdc:mga07m45_81_c1_16831_17910 358
260 3300053086 Ga0500578_0000652 Ga0500578_0000652_10500_11579 358

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03033

Glyco_transf_28

Glycosyltransferase family 28 N-terminal domain

4

142

0.98

PF04101

Glyco_tran_28_C

Glycosyltransferase family 28 C-terminal domain

184

354

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.9528 5 356
3s2u-assembly1.cif.gz_A crystal structure of the pseudomonas aeruginosa murg:udp-glcnac substrate complex 0.9444 5 356
1nlm-assembly1.cif.gz_B crystal structure of murg:glcnac complex 0.8884 4 357
1nlm-assembly1.cif.gz_B crystal structure of murg:glcnac complex 0.8813 4 357
7d1i-assembly1.cif.gz_C-2 crystal structure of acinetobacter baumannii murg 0.8703 4 355
ID Description Score Start End Superfamily
3s2uA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9714 5 163 3.40.50.2000
af_P17443_163_337_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9527 165 341 3.40.50.2000
af_P17443_163_337_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9474 165 341 3.40.50.2000
af_P17443_6_162_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9474 4 164 3.40.50.2000
af_P17443_6_162_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9416 4 164 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A522BTY9-F1-model_v4 Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC 2.4.1.227) 0.9668 72 356 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555
AF-A0A0P0MIQ9-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) 0.9654 3 358 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555
AF-A0A1G0J3Y7-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) 0.9647 4 355 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555
AF-A0A6L9KQG3-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) 0.9635 3 356 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555
AF-A0A315CFB7-F1-model_v4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) 0.9629 1 357 GO:0005886
GO:0005975
GO:0008360
GO:0009252
GO:0030259
GO:0050511
GO:0051301
GO:0051991
GO:0071555

Feature Viewer

pLDDT pTM Quality
91.98 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map