F369103

General Info

Members Datasets Scaffolds Average Seq Length
259 154 518 764

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0012957|Ga0501034_0012957_838_3294
Length 818
Sequence MFSPALEVILNIAFREAISRGHAYLTLEHLLYALAHDPDGERILAACGVDLPKLRRDLDRFLDESIERQRRGSAKDPEQTVAFRRVLQTAILHVQSAQREEANAGDILAAMLQQPKTHAAQLLIDQGVTRLDILNFISHGIAKTPQAGDTAPASTGSAQPDEGAPATANDPLSAYCVNLTERARQNQLDPLIGRTEELQRTIEVLCRRRKNNPVFVGDPGVGKTALAEGLAARLLNDDVQGALADAEVFSLDTGALLAGTRFRGDFEERFKAVIAALAARPKPILFIDEMHSTVGAGAVTGGTMDLATMLKPLLTTGSLRVIGSTTHEEFKHIEKDRALARRLQKIAVEEPSIAETISILSGLRSRYEEHHGVRYTDAALEAAAKLAARHLRDYKLPDSAIDLMDEAGSVTKLQALASAAAEAGKRASVEQGAKDQVPAEAGAHSATAEARVSVADVAPVAGRTSEAAATPGPLATPPVVDARDIERVAARVARIPDRQASASDRDRLRTLEESLRRVVFGQDEAVHLVAQAIKRSRAGLGQPDRPAGCFLFTGPTGVGKTELAKQLALLLGNEFIRFDMSEYMEKHAVARLIGAPPGYVGFEQGGLLVDAVRQHPYSVVLLDEIEKAHPDIYNVLLQVMDHATLTDNTGRKADFRNTVLILTSNAGSREMGAASIGFADKMSGADQESQGKIAAGKAKTALERVFSPEFRNRLDAIVMFKPLSPDAMETIVDKFILQLESQLTDRKVAITLTPAARGWLGRAGYDRVFGARPLARVIQKEVRDVLTDEILFGALEHGGTATIDVADDRLTFVYEPRT

Samples

Sample ID Description Type Environment
1 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
97 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
115 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
149 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
150 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.49
Nodule 0
Rhizoplane 8.11
Rhizosphere 83.4
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501034_0012957 3300049571 Bacteria 8596
2 Ga0065712_10000233 3300005290 Bacteria 23843
3 Ga0065712_10003850 3300005290 Bacteria 3872
4 Ga0065712_10069759 3300005290 Bacteria 6752
5 Ga0065715_10002761 3300005293 Bacteria 7602
6 Ga0065707_10001275 3300005295 Bacteria 7832
7 Ga0070676_10011320 3300005328 Bacteria 4849
8 Ga0070683_100003901 3300005329 Bacteria 12187
9 Ga0070670_100000536 3300005331 Bacteria 30410
10 Ga0070670_100010779 3300005331 Bacteria 7809
11 Ga0070670_100018296 3300005331 Bacteria 6012
12 Ga0070670_100021044 3300005331 Bacteria 5608
13 Ga0070666_10004240 3300005335 Bacteria 8711
14 Ga0070668_100018580 3300005347 Bacteria 5219
15 Ga0070669_100000352 3300005353 Bacteria 35915
16 Ga0070669_100066153 3300005353 Bacteria 2664
17 Ga0070675_100000188 3300005354 Bacteria 38673
18 Ga0070675_100036136 3300005354 Bacteria 4018
19 Ga0070674_100003459 3300005356 Bacteria 8865
20 Ga0070674_100013264 3300005356 Bacteria 5089
21 Ga0070674_100014927 3300005356 Bacteria 4837
22 Ga0070673_100002757 3300005364 Bacteria 10793
23 Ga0070688_100019546 3300005365 Bacteria 3925
24 Ga0070713_100003844 3300005436 Bacteria 9947
25 Ga0070705_100007743 3300005440 Bacteria 5303
26 Ga0070694_100011805 3300005444 Bacteria 5416
27 Ga0070662_100061977 3300005457 Bacteria 2732
28 Ga0070681_10027166 3300005458 Bacteria 5754
29 Ga0068867_100035919 3300005459 Bacteria 3596
30 Ga0070685_10014577 3300005466 Bacteria 4166
31 Ga0070706_100042497 3300005467 Bacteria 4200
32 Ga0070698_100017246 3300005471 Bacteria 7608
33 Ga0070698_100030920 3300005471 Bacteria 5552
34 Ga0070679_100022503 3300005530 Bacteria 6160
35 Ga0070679_100073872 3300005530 Bacteria 3401
36 Ga0070684_100013742 3300005535 Bacteria 6535
37 Ga0070684_100015056 3300005535 Bacteria 6285
38 Ga0070697_100025027 3300005536 Bacteria 4757
39 Ga0070696_100021729 3300005546 Bacteria 4353
40 Ga0070665_100066181 3300005548 Bacteria 3625
41 Ga0070704_100014939 3300005549 Bacteria 4861
42 Ga0070664_100000148 3300005564 Bacteria 48402
43 Ga0068857_100034135 3300005577 Bacteria 4501
44 Ga0068859_100030140 3300005617 Bacteria 5443
45 Ga0068864_100039882 3300005618 Bacteria 4014
46 Ga0068864_100079232 3300005618 Bacteria 2876
47 Ga0068860_100015320 3300005843 Bacteria 7489
48 Ga0068862_100003727 3300005844 Bacteria 13004
49 Ga0081455_10052706 3300005937 Bacteria 3481
50 Ga0081539_10018250 3300005985 Bacteria 4878
51 Ga0075365_10002582 3300006038 Bacteria 8953
52 Ga0075368_10003334 3300006042 Bacteria 5346
53 Ga0075364_10038640 3300006051 Bacteria 3092
54 Ga0075367_10000563 3300006178 Bacteria 14116
55 Ga0075367_10002554 3300006178 Bacteria 8355
56 Ga0075367_10005164 3300006178 Bacteria 6449
57 Ga0075366_10015852 3300006195 Bacteria 4326
58 Ga0075366_10031066 3300006195 Bacteria 3142
59 Ga0097621_100034127 3300006237 Bacteria 4056
60 Ga0075370_10009225 3300006353 Bacteria 5112
61 Ga0075428_100027379 3300006844 Bacteria 6308
62 Ga0075428_100038823 3300006844 Bacteria 5239
63 Ga0075428_100072164 3300006844 Bacteria 3772
64 Ga0075430_100012122 3300006846 Bacteria 7341
65 Ga0075430_100034809 3300006846 Bacteria 4275
66 Ga0075431_100004723 3300006847 Bacteria 13385
67 Ga0075431_100006143 3300006847 Bacteria 11917
68 Ga0075431_100011665 3300006847 Bacteria 8866
69 Ga0075431_100032798 3300006847 Bacteria 5352
70 Ga0075431_100065294 3300006847 Bacteria 3758
71 Ga0075433_10007619 3300006852 Bacteria 8596
72 Ga0075433_10012979 3300006852 Bacteria 6754
73 Ga0075433_10018625 3300006852 Bacteria 5775
74 Ga0075429_100001784 3300006880 Bacteria 17816
75 Ga0075429_100011707 3300006880 Bacteria 7608
76 Ga0068865_100005576 3300006881 Bacteria 7635
77 Ga0075436_100002068 3300006914 Bacteria 13847
78 Ga0097620_100030138 3300006931 Bacteria 5443
79 Ga0075435_100050623 3300007076 Bacteria 3343
80 Ga0111539_10000246 3300009094 Bacteria 65003
81 Ga0111539_10000360 3300009094 Bacteria 56004
82 Ga0111539_10000903 3300009094 Bacteria 38809
83 Ga0111539_10033464 3300009094 Bacteria 6239
84 Ga0111539_10055504 3300009094 Bacteria 4709
85 Ga0105245_10001420 3300009098 Bacteria 21730
86 Ga0105247_10019850 3300009101 Bacteria 4036
87 Ga0114129_10003220 3300009147 Bacteria 22906
88 Ga0114129_10003548 3300009147 Bacteria 21961
89 Ga0114129_10005068 3300009147 Bacteria 18543
90 Ga0114129_10006160 3300009147 Bacteria 17017
91 Ga0114129_10008092 3300009147 Bacteria 14981
92 Ga0114129_10010479 3300009147 Bacteria 13220
93 Ga0114129_10030757 3300009147 Bacteria 7593
94 Ga0114129_10036309 3300009147 Bacteria 6959
95 Ga0114129_10044271 3300009147 Bacteria 6261
96 Ga0105242_10022089 3300009176 Bacteria 5000
97 Ga0105248_10003325 3300009177 Bacteria 17854
98 Ga0105248_10007336 3300009177 Bacteria 12101
99 Ga0105248_10042069 3300009177 Bacteria 5124
100 Ga0105249_10000496 3300009553 Bacteria 36369
101 Ga0163162_10035018 3300013306 Bacteria 4999
102 Ga0157372_10088845 3300013307 Bacteria 3510
103 Ga0157375_10064029 3300013308 Bacteria 3660
104 Ga0163163_10000221 3300014325 Bacteria 58503
105 Ga0163163_10027322 3300014325 Bacteria 5465
106 Ga0157377_10014061 3300014745 Bacteria 4067
107 Ga0157379_10024033 3300014968 Bacteria 5408
108 Ga0157376_10016151 3300014969 Bacteria 5661
109 Ga0207645_10013704 3300025907 Bacteria 5451
110 Ga0207684_10043996 3300025910 Bacteria 3787
111 Ga0207695_10097766 3300025913 Bacteria 2936
112 Ga0207662_10002425 3300025918 Bacteria 9354
113 Ga0207662_10012387 3300025918 Bacteria 4747
114 Ga0207657_10010266 3300025919 Bacteria 9347
115 Ga0207652_10039716 3300025921 Bacteria 3994
116 Ga0207681_10013002 3300025923 Bacteria 5145
117 Ga0207659_10000168 3300025926 Bacteria 39208
118 Ga0207669_10009667 3300025937 Bacteria 4609
119 Ga0207691_10001855 3300025940 Bacteria 20651
120 Ga0207691_10009156 3300025940 Bacteria 9502
121 Ga0207711_10011836 3300025941 Bacteria 7248
122 Ga0207711_10045253 3300025941 Bacteria 3761
123 Ga0207661_10031943 3300025944 Bacteria 4073
124 Ga0207651_10002084 3300025960 Bacteria 9435
125 Ga0207712_10004160 3300025961 Bacteria 9138
126 Ga0207658_10078215 3300025986 Bacteria 2527
127 Ga0207703_10004815 3300026035 Bacteria 10991
128 Ga0207678_10016241 3300026067 Bacteria 6534
129 Ga0207678_10023362 3300026067 Bacteria 5407
130 Ga0207678_10056757 3300026067 Bacteria 3370
131 Ga0207708_10008027 3300026075 Bacteria 7824
132 Ga0207708_10008301 3300026075 Bacteria 7692
133 Ga0207708_10035985 3300026075 Bacteria 3767
134 Ga0207641_10027523 3300026088 Bacteria 4696
135 Ga0207648_10005374 3300026089 Bacteria 12912
136 Ga0207648_10007094 3300026089 Bacteria 11058
137 Ga0207648_10063371 3300026089 Bacteria 3222
138 Ga0207676_10023774 3300026095 Bacteria 4527
139 Ga0207674_10054197 3300026116 Bacteria 4084
140 Ga0207675_100014223 3300026118 Bacteria 7419
141 Ga0207683_10011002 3300026121 Bacteria 7714
142 Ga0207683_10011439 3300026121 Bacteria 7573
143 Ga0207683_10015622 3300026121 Bacteria 6462
144 Ga0207428_10000220 3300027907 Bacteria 79712
145 Ga0207428_10000886 3300027907 Bacteria 33600
146 Ga0207428_10009973 3300027907 Bacteria 8503
147 Ga0207428_10022260 3300027907 Bacteria 5352
148 Ga0207428_10023205 3300027907 Bacteria 5220
149 Ga0207428_10034603 3300027907 Bacteria 4136
150 Ga0268265_10020560 3300028380 Bacteria 4608
151 Ga0307408_100006951 3300031548 Bacteria 7492
152 Ga0316576_10030589 3300031727 Bacteria 3813
153 Ga0316578_10014114 3300031728 Bacteria 4257
154 Ga0316577_10019816 3300031733 Bacteria 3726
155 Ga0307412_10010657 3300031911 Bacteria 5299
156 Ga0307416_100011753 3300032002 Bacteria 5863
157 Ga0307416_100012559 3300032002 Bacteria 5713
158 Ga0307414_10028122 3300032004 Bacteria 3643
159 Ga0307415_100005642 3300032126 Bacteria 6664
160 Ga0373955_0002408 3300035172 Bacteria 8152
161 Ga0373933_0000512 3300035724 Bacteria 24235
162 Ga0373933_0002054 3300035724 Bacteria 11570
163 Ga0373933_0013102 3300035724 Bacteria 4592
164 Ga0373947_0027822 3300035725 Bacteria 3311
165 Ga0373937_0001203 3300036401 Bacteria 21757
166 Ga0373937_0001333 3300036401 Bacteria 20643
167 Ga0373937_0011665 3300036401 Bacteria 7710
168 Ga0316582_0035771 3300036647 Bacteria 3069
169 Ga0453684_0000107 3300044712 Bacteria 362864
170 Ga0453684_0010234 3300044712 Bacteria 16067
171 Ga0451576_0058277 3300045051 Bacteria 4036
172 Ga0451576_0092246 3300045051 Bacteria 3150
173 Ga0495645_0038382 3300046543 Bacteria 3493
174 Ga0495635_0050676 3300046663 Bacteria 2862
175 Ga0495658_0014559 3300046683 Bacteria 4022
176 Ga0495669_0003770 3300046684 Bacteria 6230
177 Ga0495672_0001394 3300047320 Bacteria 23783
178 Ga0496100_0002720 3300048903 Bacteria 9041
179 Ga0496101_0012804 3300048904 Bacteria 5610
180 Ga0496102_0041987 3300048905 Bacteria 4144
181 Ga0496104_0014075 3300048907 Bacteria 7221
182 Ga0496104_0017354 3300048907 Bacteria 6552
183 Ga0496104_0025428 3300048907 Bacteria 5458
184 Ga0496105_0006939 3300048908 Bacteria 8724
185 Ga0496106_0008112 3300048909 Bacteria 7757
186 Ga0496106_0010466 3300048909 Bacteria 6850
187 Ga0496106_0016505 3300048909 Bacteria 5465
188 Ga0496108_0027397 3300048911 Bacteria 4705
189 Ga0496109_0021221 3300048912 Bacteria 5741
190 Ga0496109_0024116 3300048912 Bacteria 5405
191 Ga0496110_0021577 3300048913 Bacteria 5456
192 Ga0496112_0005099 3300048915 Bacteria 11287
193 Ga0496112_0011935 3300048915 Bacteria 7961
194 Ga0496112_0015018 3300048915 Bacteria 7210
195 Ga0496113_0054308 3300048916 Bacteria 2998
196 Ga0496114_0000879 3300048917 Bacteria 22500
197 Ga0496114_0031687 3300048917 Bacteria 4349
198 Ga0496114_0035256 3300048917 Bacteria 4131
199 Ga0501036_0020829 3300049572 Bacteria 5508
200 Ga0501036_0066122 3300049572 Bacteria 3059
201 Ga0501047_0012190 3300049581 Bacteria 8138
202 Ga0501047_0033446 3300049581 Bacteria 4963
203 Ga0501048_0059602 3300049582 Bacteria 2705
204 Ga0501071_0011258 3300049587 Bacteria 6020
205 Ga0501072_0037863 3300049588 Bacteria 3783
206 Ga0501072_0048597 3300049588 Bacteria 3341
207 Ga0501075_0041375 3300049591 Bacteria 3453
208 Ga0501075_0061729 3300049591 Bacteria 2825
209 Ga0501076_0015112 3300049592 Bacteria 5829
210 Ga0501076_0029583 3300049592 Bacteria 4261
211 Ga0501076_0048493 3300049592 Bacteria 3357
212 Ga0501080_0076143 3300049742 Bacteria 3121
213 Ga0501044_0003699 3300049823 Bacteria 17198
214 Ga0501045_0030140 3300049824 Bacteria 3925
215 Ga0501045_0041243 3300049824 Bacteria 3359
216 nmdc:mga03683_2252_c1 3300050489 Bacteria 5952
217 nmdc:mga00v17_31043_c1 3300050491 Bacteria 3148
218 nmdc:mga00v17_6134_c1 3300050491 Bacteria 6368
219 nmdc:mga0yw44_12009_c2 3300050492 Bacteria 3721
220 nmdc:mga0k408_1346_c1 3300050493 Bacteria 13269
221 nmdc:mga0k408_21735_c1 3300050493 Bacteria 3607
222 nmdc:mga0k408_6265_c1 3300050493 Bacteria 6346
223 nmdc:mga06z11_4454_c1 3300050494 Bacteria 5512
224 nmdc:mga05p37_14979_c1 3300050507 Bacteria 9307
225 nmdc:mga05p37_1742_c1 3300050507 Bacteria 25391
226 nmdc:mga05p37_2338_c1 3300050507 Bacteria 22051
227 nmdc:mga05p37_28713_c1 3300050507 Bacteria 6786
228 nmdc:mga05p37_3545_c1 3300050507 Bacteria 18216
229 nmdc:mga05p37_45167_c1 3300050507 Bacteria 5420
230 nmdc:mga05p37_47381_c1 3300050507 Bacteria 5286
231 nmdc:mga05p37_5171_c1 3300050507 Bacteria 15299
232 nmdc:mga05p37_63651_c1 3300050507 Bacteria 4539
233 nmdc:mga09592_16794_c1 3300050508 Bacteria 5991
234 nmdc:mga09592_27125_c1 3300050508 Bacteria 4752
235 nmdc:mga09592_32228_c1 3300050508 Bacteria 4369
236 nmdc:mga09592_67003_c1 3300050508 Bacteria 3044
237 nmdc:mga0qj67_20523_c1 3300050509 Bacteria 5061
238 nmdc:mga06r32_11098_c1 3300050510 Bacteria 8108
239 nmdc:mga06r32_13146_c1 3300050510 Bacteria 7497
240 nmdc:mga06r32_39276_c1 3300050510 Bacteria 4491
241 nmdc:mga06r32_659_c1 3300050510 Bacteria 30163
242 nmdc:mga08y16_10003_c1 3300050511 Bacteria 9952
243 nmdc:mga08y16_26000_c1 3300050511 Bacteria 6175
244 nmdc:mga08y16_27876_c1 3300050511 Bacteria 5955
245 nmdc:mga08y16_33024_c1 3300050511 Bacteria 5438
246 nmdc:mga08y16_4224_c1 3300050511 Bacteria 14984
247 nmdc:mga08y16_784_c1 3300050511 Bacteria 30326
248 nmdc:mga0rr50_7110_c1 3300050513 Bacteria 6874
249 nmdc:mga0rr50_8307_c1 3300050513 Bacteria 6458
250 nmdc:mga0a205_12265_c1 3300050515 Bacteria 7928
251 nmdc:mga0a205_32455_c1 3300050515 Bacteria 5006
252 nmdc:mga0a205_7877_c1 3300050515 Bacteria 9675
253 Ga0495619_0015664 3300053085 Bacteria 4799
254 Ga0500641_0001293 3300053096 Bacteria 8906
255 Ga0500555_000353 3300053103 Bacteria 19473
256 Ga0500568_0000869 3300053139 Bacteria 21197
257 Ga0500616_0001512 3300053153 Bacteria 21958
258 Ga0500645_000092 3300053730 Bacteria 69820
259 Ga0590071_000343 3300059421 Bacteria 13664
260 Ga0501034_0012957
261 Ga0065712_10000233
262 Ga0065712_10003850
263 Ga0065712_10069759
264 Ga0065715_10002761
265 Ga0065707_10001275
266 Ga0070676_10011320
267 Ga0070683_100003901
268 Ga0070670_100000536
269 Ga0070670_100010779
270 Ga0070670_100018296
271 Ga0070670_100021044
272 Ga0070666_10004240
273 Ga0070668_100018580
274 Ga0070669_100000352
275 Ga0070669_100066153
276 Ga0070675_100000188
277 Ga0070675_100036136
278 Ga0070674_100003459
279 Ga0070674_100013264
280 Ga0070674_100014927
281 Ga0070673_100002757
282 Ga0070688_100019546
283 Ga0070713_100003844
284 Ga0070705_100007743
285 Ga0070694_100011805
286 Ga0070662_100061977
287 Ga0070681_10027166
288 Ga0068867_100035919
289 Ga0070685_10014577
290 Ga0070706_100042497
291 Ga0070698_100017246
292 Ga0070698_100030920
293 Ga0070679_100022503
294 Ga0070679_100073872
295 Ga0070684_100013742
296 Ga0070684_100015056
297 Ga0070697_100025027
298 Ga0070696_100021729
299 Ga0070665_100066181
300 Ga0070704_100014939
301 Ga0070664_100000148
302 Ga0068857_100034135
303 Ga0068859_100030140
304 Ga0068864_100039882
305 Ga0068864_100079232
306 Ga0068860_100015320
307 Ga0068862_100003727
308 Ga0081455_10052706
309 Ga0081539_10018250
310 Ga0075365_10002582
311 Ga0075368_10003334
312 Ga0075364_10038640
313 Ga0075367_10000563
314 Ga0075367_10002554
315 Ga0075367_10005164
316 Ga0075366_10015852
317 Ga0075366_10031066
318 Ga0097621_100034127
319 Ga0075370_10009225
320 Ga0075428_100027379
321 Ga0075428_100038823
322 Ga0075428_100072164
323 Ga0075430_100012122
324 Ga0075430_100034809
325 Ga0075431_100004723
326 Ga0075431_100006143
327 Ga0075431_100011665
328 Ga0075431_100032798
329 Ga0075431_100065294
330 Ga0075433_10007619
331 Ga0075433_10012979
332 Ga0075433_10018625
333 Ga0075429_100001784
334 Ga0075429_100011707
335 Ga0068865_100005576
336 Ga0075436_100002068
337 Ga0097620_100030138
338 Ga0075435_100050623
339 Ga0111539_10000246
340 Ga0111539_10000360
341 Ga0111539_10000903
342 Ga0111539_10033464
343 Ga0111539_10055504
344 Ga0105245_10001420
345 Ga0105247_10019850
346 Ga0114129_10003220
347 Ga0114129_10003548
348 Ga0114129_10005068
349 Ga0114129_10006160
350 Ga0114129_10008092
351 Ga0114129_10010479
352 Ga0114129_10030757
353 Ga0114129_10036309
354 Ga0114129_10044271
355 Ga0105242_10022089
356 Ga0105248_10003325
357 Ga0105248_10007336
358 Ga0105248_10042069
359 Ga0105249_10000496
360 Ga0163162_10035018
361 Ga0157372_10088845
362 Ga0157375_10064029
363 Ga0163163_10000221
364 Ga0163163_10027322
365 Ga0157377_10014061
366 Ga0157379_10024033
367 Ga0157376_10016151
368 Ga0207645_10013704
369 Ga0207684_10043996
370 Ga0207695_10097766
371 Ga0207662_10002425
372 Ga0207662_10012387
373 Ga0207657_10010266
374 Ga0207652_10039716
375 Ga0207681_10013002
376 Ga0207659_10000168
377 Ga0207669_10009667
378 Ga0207691_10001855
379 Ga0207691_10009156
380 Ga0207711_10011836
381 Ga0207711_10045253
382 Ga0207661_10031943
383 Ga0207651_10002084
384 Ga0207712_10004160
385 Ga0207658_10078215
386 Ga0207703_10004815
387 Ga0207678_10016241
388 Ga0207678_10023362
389 Ga0207678_10056757
390 Ga0207708_10008027
391 Ga0207708_10008301
392 Ga0207708_10035985
393 Ga0207641_10027523
394 Ga0207648_10005374
395 Ga0207648_10007094
396 Ga0207648_10063371
397 Ga0207676_10023774
398 Ga0207674_10054197
399 Ga0207675_100014223
400 Ga0207683_10011002
401 Ga0207683_10011439
402 Ga0207683_10015622
403 Ga0207428_10000220
404 Ga0207428_10000886
405 Ga0207428_10009973
406 Ga0207428_10022260
407 Ga0207428_10023205
408 Ga0207428_10034603
409 Ga0268265_10020560
410 Ga0307408_100006951
411 Ga0316576_10030589
412 Ga0316578_10014114
413 Ga0316577_10019816
414 Ga0307412_10010657
415 Ga0307416_100011753
416 Ga0307416_100012559
417 Ga0307414_10028122
418 Ga0307415_100005642
419 Ga0373955_0002408
420 Ga0373933_0000512
421 Ga0373933_0002054
422 Ga0373933_0013102
423 Ga0373947_0027822
424 Ga0373937_0001203
425 Ga0373937_0001333
426 Ga0373937_0011665
427 Ga0316582_0035771
428 Ga0453684_0000107
429 Ga0453684_0010234
430 Ga0451576_0058277
431 Ga0451576_0092246
432 Ga0495645_0038382
433 Ga0495635_0050676
434 Ga0495658_0014559
435 Ga0495669_0003770
436 Ga0495672_0001394
437 Ga0496100_0002720
438 Ga0496101_0012804
439 Ga0496102_0041987
440 Ga0496104_0014075
441 Ga0496104_0017354
442 Ga0496104_0025428
443 Ga0496105_0006939
444 Ga0496106_0008112
445 Ga0496106_0010466
446 Ga0496106_0016505
447 Ga0496108_0027397
448 Ga0496109_0021221
449 Ga0496109_0024116
450 Ga0496110_0021577
451 Ga0496112_0005099
452 Ga0496112_0011935
453 Ga0496112_0015018
454 Ga0496113_0054308
455 Ga0496114_0000879
456 Ga0496114_0031687
457 Ga0496114_0035256
458 Ga0501036_0020829
459 Ga0501036_0066122
460 Ga0501047_0012190
461 Ga0501047_0033446
462 Ga0501048_0059602
463 Ga0501071_0011258
464 Ga0501072_0037863
465 Ga0501072_0048597
466 Ga0501075_0041375
467 Ga0501075_0061729
468 Ga0501076_0015112
469 Ga0501076_0029583
470 Ga0501076_0048493
471 Ga0501080_0076143
472 Ga0501044_0003699
473 Ga0501045_0030140
474 Ga0501045_0041243
475 nmdc:mga03683_2252_c1
476 nmdc:mga00v17_31043_c1
477 nmdc:mga00v17_6134_c1
478 nmdc:mga0yw44_12009_c2
479 nmdc:mga0k408_1346_c1
480 nmdc:mga0k408_21735_c1
481 nmdc:mga0k408_6265_c1
482 nmdc:mga06z11_4454_c1
483 nmdc:mga05p37_14979_c1
484 nmdc:mga05p37_1742_c1
485 nmdc:mga05p37_2338_c1
486 nmdc:mga05p37_28713_c1
487 nmdc:mga05p37_3545_c1
488 nmdc:mga05p37_45167_c1
489 nmdc:mga05p37_47381_c1
490 nmdc:mga05p37_5171_c1
491 nmdc:mga05p37_63651_c1
492 nmdc:mga09592_16794_c1
493 nmdc:mga09592_27125_c1
494 nmdc:mga09592_32228_c1
495 nmdc:mga09592_67003_c1
496 nmdc:mga0qj67_20523_c1
497 nmdc:mga06r32_11098_c1
498 nmdc:mga06r32_13146_c1
499 nmdc:mga06r32_39276_c1
500 nmdc:mga06r32_659_c1
501 nmdc:mga08y16_10003_c1
502 nmdc:mga08y16_26000_c1
503 nmdc:mga08y16_27876_c1
504 nmdc:mga08y16_33024_c1
505 nmdc:mga08y16_4224_c1
506 nmdc:mga08y16_784_c1
507 nmdc:mga0rr50_7110_c1
508 nmdc:mga0rr50_8307_c1
509 nmdc:mga0a205_12265_c1
510 nmdc:mga0a205_32455_c1
511 nmdc:mga0a205_7877_c1
512 Ga0495619_0015664
513 Ga0500641_0001293
514 Ga0500555_000353
515 Ga0500568_0000869
516 Ga0500616_0001512
517 Ga0500645_000092
518 Ga0590071_000343

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02861

Clp_N

Clp amino terminal domain, pathogenicity island component

13

63

0.97

PF10431

ClpB_D2-small

C-terminal, D2-small domain, of ClpB protein

723

803

0.97

PF07724

AAA_2

AAA domain (Cdc48 subfamily)

545

717

0.96

PF02861

Clp_N

Clp amino terminal domain, pathogenicity island component

107

137

0.92

PF07728

AAA_5

AAA domain (dynein-related subfamily)

549

677

0.89

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

550

677

0.86

PF17871

AAA_lid_9

AAA lid domain

352

453

0.82

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

213

349

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mg9-assembly1.cif.gz_B the structural basis of clps-mediated switch in clpa substrate recognition 0.9628 1 140
1mbv-assembly1.cif.gz_A crystal structure analysis of clpsn heterodimer tetragonal form 0.9613 1 140
1lzw-assembly2.cif.gz_B-2 structural basis of clps-mediated switch in clpa substrate recognition 0.9598 1 139
1mbu-assembly1.cif.gz_A crystal structure analysis of clpsn heterodimer 0.9562 1 140
1mbv-assembly1.cif.gz_A crystal structure analysis of clpsn heterodimer tetragonal form 0.9417 1 140
ID Description Score Start End Superfamily
af_A0A1D6K706_96_155_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9757 363 420 1.10.8.60
af_I1KBU6_471_565_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9724 356 420 1.10.8.60
af_I1JXT1_467_561_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.97 356 420 1.10.8.60
af_Q7XL03_444_534_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9651 356 420 1.10.8.60
1mg9B00 Mainly Alpha;Orthogonal Bundle;Double Clp-N motif;Clp, N-terminal domain 0.9628 1 140 1.10.1780.10
ID Description Score Start End GO Terms
AF-A0A534RCX6-F1-model_v4 ATP-dependent Clp protease ATP-binding subunit ClpA 0.9769 1 130 GO:0005524
GO:0006508
GO:0008233
AF-A0A534RCX6-F1-model_v4 ATP-dependent Clp protease ATP-binding subunit ClpA 0.9552 1 130 GO:0005524
GO:0006508
GO:0008233
AF-A0A527ZC16-F1-model_v4 ATP-dependent Clp protease ATP-binding subunit ClpA 0.9504 15 141 GO:0005524
GO:0006508
GO:0008233
AF-A0A7U6KQU8-F1-model_v4 Clp R domain-containing protein 0.9463 1 128
AF-A0A8B4Q1U9-F1-model_v4 deleted 0.9415 1 92

Map