F369012

General Info

Members Datasets Scaffolds Average Seq Length
259 153 516 144

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0080689|Ga0466970_0080689_40_537
Length 165
Sequence VVRVDTRQQEQEEETPMLMRTDPFREADRLAQQVFGGVAGTWSKPAVMPMDAYRTGDEFVVHFDLPGVDPGSIDLEVERNVLTVRAERRPVNGDAGVQTVVSERPLGVFSRQLFLGDALDAEHVDASYDAGVLTLRIPIAERSRPRKITVNSGQIEHTDRQQLTA

Samples

Sample ID Description Type Environment
1 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
2 3300003161 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_8 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003284 Avena fatua rhizosphere microbial communities - H3_Bulk_Litter_16 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003305 Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_13 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
11 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
12 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
13 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
14 3300003611 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_27 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
15 3300003613 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_31 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
16 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300003735 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
47 3300013045 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300029277 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.ctcc.R1 Metatranscriptome Rhizosphere
81 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
84 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
97 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
98 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
99 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
100 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
101 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
102 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
103 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
104 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
112 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
148 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
149 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
150 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
151 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
152 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
153 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 72.97
Metatranscriptomes 24.32
Isolates 2.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.93
Nodule 0
Rhizoplane 0.77
Rhizosphere 88.03
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466970_0080689 3300044765 Bacteria 1758
2 Ga0006765J45826_108996 3300003161 Bacteria 725
3 Ga0006778J45830_1032096 3300003162 Bacteria 773
4 Ga0006778J45830_1051433 3300003162 Bacteria 607
5 Ga0006759J45824_1029072 3300003163 Bacteria 718
6 JGI25406J46586_10033692 3300003203 Bacteria 1889
7 Ga0006773J48901_11715 3300003284 Bacteria 688
8 Ga0006770J48903_1009011 3300003305 Bacteria 672
9 Ga0006770J48903_1012615 3300003305 Bacteria 692
10 Ga0006777J48905_1002396 3300003308 Bacteria 1309
11 Ga0006777J48905_1019633 3300003308 Bacteria 748
12 Ga0006777J48905_1038425 3300003308 Bacteria 771
13 rootH1_10350540 3300003323 Bacteria 1333
14 Ga0007417J51691_1009656 3300003544 Bacteria 531
15 Ga0007417J51691_1043651 3300003544 Bacteria 742
16 Ga0007410J51695_1044621 3300003574 Bacteria 611
17 Ga0007416J51690_1006603 3300003577 Bacteria 1003
18 Ga0007416J51690_1017689 3300003577 Bacteria 781
19 Ga0007416J51690_1042606 3300003577 Bacteria 622
20 Ga0007416J51690_1046884 3300003577 Bacteria 735
21 Ga0007429J51699_1005358 3300003579 Bacteria 1300
22 Ga0007429J51699_1005886 3300003579 Bacteria 988
23 Ga0007429J51699_1021622 3300003579 Bacteria 745
24 Ga0007429J51699_1025778 3300003579 Bacteria 659
25 Ga0007411J51799_117134 3300003611 Bacteria 667
26 Ga0007415J51800_108509 3300003613 Bacteria 679
27 Ga0007415J51800_112814 3300003613 Bacteria 519
28 Ga0032354_1007940 3300003693 Bacteria 1296
29 Ga0032354_1011701 3300003693 Bacteria 719
30 Ga0032354_1054497 3300003693 Bacteria 686
31 Ga0006780_1015802 3300003735 Bacteria 721
32 Ga0070683_100493185 3300005329 Bacteria 1170
33 Ga0070670_100497441 3300005331 Bacteria 1084
34 Ga0068869_100212332 3300005334 Bacteria 1530
35 Ga0068868_100257622 3300005338 Bacteria 1470
36 Ga0070661_100317971 3300005344 Bacteria 1215
37 Ga0070714_100387358 3300005435 Bacteria 1319
38 Ga0070663_100167011 3300005455 Bacteria 1698
39 Ga0070684_101401118 3300005535 Bacteria 658
40 Ga0070693_100521278 3300005547 Bacteria 846
41 Ga0070665_100220068 3300005548 Bacteria 1899
42 Ga0068855_102077489 3300005563 Bacteria 572
43 Ga0070664_100901180 3300005564 Bacteria 829
44 Ga0068857_101977408 3300005577 Bacteria 572
45 Ga0068856_100328472 3300005614 Bacteria 1547
46 Ga0068864_100199592 3300005618 Bacteria 1837
47 Ga0068870_10044034 3300005840 Bacteria 2330
48 Ga0068860_100837986 3300005843 Bacteria 934
49 Ga0068862_101143885 3300005844 Bacteria 775
50 Ga0081539_10007048 3300005985 Bacteria 10402
51 Ga0070717_10612329 3300006028 Bacteria 988
52 Ga0075363_100433106 3300006048 Bacteria 775
53 Ga0075428_101871225 3300006844 Bacteria 624
54 Ga0075431_100030586 3300006847 Bacteria 5547
55 Ga0111539_11455597 3300009094 Bacteria 794
56 Ga0105247_11096708 3300009101 Bacteria 628
57 Ga0105242_11543931 3300009176 Bacteria 696
58 Ga0105237_10510922 3300009545 Bacteria 1208
59 Ga0105246_10101094 3300011119 Bacteria 2099
60 Ga0154017_11709 3300013041 Bacteria 552
61 Ga0154016_133043 3300013045 Bacteria 955
62 Ga0157374_11289122 3300013296 Bacteria 752
63 Ga0157378_12283331 3300013297 Bacteria 592
64 Ga0157375_11913416 3300013308 Bacteria 704
65 Ga0163163_10205274 3300014325 Bacteria 2019
66 Ga0157380_12483768 3300014326 Bacteria 584
67 Ga0157379_11104140 3300014968 Bacteria 760
68 Ga0206349_1050683 3300020075 Bacteria 507
69 Ga0206349_1141901 3300020075 Bacteria 844
70 Ga0206349_1781243 3300020075 Bacteria 1060
71 Ga0206349_1885533 3300020075 Bacteria 985
72 Ga0206351_10042940 3300020077 Bacteria 567
73 Ga0206351_10128596 3300020077 Bacteria 817
74 Ga0206351_10233048 3300020077 Bacteria 891
75 Ga0206351_10385172 3300020077 Bacteria 995
76 Ga0206351_10471445 3300020077 Bacteria 1124
77 Ga0206351_10923032 3300020077 Bacteria 612
78 Ga0206351_10968796 3300020077 Bacteria 636
79 Ga0206350_10234911 3300020080 Bacteria 1294
80 Ga0206350_10415845 3300020080 Bacteria 800
81 Ga0206350_10859479 3300020080 Bacteria 665
82 Ga0206350_10889988 3300020080 Bacteria 844
83 Ga0206354_10547949 3300020081 Bacteria 1301
84 Ga0206354_11097899 3300020081 Bacteria 1704
85 Ga0206353_11053742 3300020082 Bacteria 4404
86 Ga0154015_1137403 3300020610 Bacteria 632
87 Ga0154015_1273447 3300020610 Bacteria 661
88 Ga0154015_1350065 3300020610 Bacteria 1413
89 Ga0154015_1507478 3300020610 Bacteria 817
90 Ga0154015_1541538 3300020610 Bacteria 539
91 Ga0213873_10000221 3300021358 Bacteria 10047
92 Ga0213873_10000332 3300021358 Bacteria 7948
93 Ga0213876_10114945 3300021384 Bacteria 1428
94 Ga0213875_10000123 3300021388 Bacteria 86889
95 Ga0213875_10014340 3300021388 Bacteria 3867
96 Ga0213875_10045325 3300021388 Bacteria 2064
97 Ga0213875_10064814 3300021388 Bacteria 1707
98 Ga0213875_10073190 3300021388 Bacteria 1599
99 Ga0224712_10051848 3300022467 Bacteria 1600
100 Ga0224712_10167252 3300022467 Bacteria 984
101 Ga0224712_10251588 3300022467 Bacteria 816
102 Ga0224712_10251921 3300022467 Bacteria 816
103 Ga0224712_10444997 3300022467 Bacteria 622
104 Ga0224712_10550870 3300022467 Bacteria 560
105 Ga0207705_11250914 3300025909 Bacteria 568
106 Ga0207694_10422099 3300025924 Bacteria 1111
107 Ga0207659_11723151 3300025926 Bacteria 533
108 Ga0207687_10868615 3300025927 Bacteria 771
109 Ga0207670_10502362 3300025936 Bacteria 985
110 Ga0207691_10669211 3300025940 Bacteria 876
111 Ga0207661_10473792 3300025944 Bacteria 1142
112 Ga0207677_10151094 3300026023 Bacteria 1792
113 Ga0207678_10057029 3300026067 Bacteria 3362
114 Ga0207678_10419722 3300026067 Bacteria 1160
115 Ga0207702_11345474 3300026078 Bacteria 708
116 Ga0207648_10544842 3300026089 Bacteria 1065
117 Ga0207676_10673300 3300026095 Bacteria 1000
118 Ga0207676_11032092 3300026095 Bacteria 811
119 Ga0207683_10205259 3300026121 Bacteria 1792
120 Ga0268266_10910386 3300028379 Bacteria 851
121 Ga0268264_12087057 3300028381 Bacteria 575
122 Ga0307515_10054847 3300028794 Bacteria 5840
123 Ga0311001_1094451 3300029277 Bacteria 620
124 Ga0307512_10007676 3300030522 Bacteria 10642
125 Ga0307408_100379481 3300031548 Bacteria 1208
126 Ga0307508_10447060 3300031616 Bacteria 885
127 Ga0307514_10398734 3300031649 Bacteria 704
128 Ga0307405_11069411 3300031731 Bacteria 692
129 Ga0307413_10169068 3300031824 Bacteria 1545
130 Ga0307410_10056133 3300031852 Bacteria 2677
131 Ga0307409_100024714 3300031995 Bacteria 4197
132 Ga0307411_11084901 3300032005 Bacteria 721
133 Ga0307415_101324807 3300032126 Bacteria 683
134 Ga0307415_101361503 3300032126 Bacteria 674
135 Ga0307510_10155957 3300033180 Bacteria 1890
136 Ga0373951_0000093 3300035091 Bacteria 34630
137 Ga0373951_0005301 3300035091 Bacteria 3001
138 Ga0395899_0317225 3300037312 Bacteria 1051
139 Ga0436364_0475120 3300037853 Bacteria 11804
140 Ga0436364_0650058 3300037853 Bacteria 1388
141 Ga0436364_0661798 3300037853 Bacteria 86818
142 Ga0436364_0861133 3300037853 Bacteria 1988
143 Ga0436364_0952951 3300037853 Bacteria 24624
144 Ga0436365_0889716 3300039437 Bacteria 5752
145 Ga0436365_1092544 3300039437 Bacteria 1933
146 Ga0436365_1167623 3300039437 Bacteria 916
147 Ga0436365_1878649 3300039437 Bacteria 4253
148 Ga0436362_0077710 3300039453 Bacteria 57672
149 Ga0436362_0341368 3300039453 Bacteria 587
150 Ga0436362_1116497 3300039453 Bacteria 1064
151 Ga0436362_1210029 3300039453 Bacteria 10312
152 Ga0439436_0020925 3300041404 Bacteria 1947
153 Ga0439438_089679 3300041405 Bacteria 750
154 Ga0439439_0033500 3300041406 Bacteria 1315
155 Ga0439439_0168523 3300041406 Bacteria 627
156 Ga0439466_0014242 3300041411 Bacteria 2899
157 Ga0451789_0864428 3300041443 Bacteria 1499
158 Ga0439442_025411 3300042002 Bacteria 1232
159 Ga0439449_0002541 3300042007 Bacteria 7130
160 Ga0439449_0420155 3300042007 Bacteria 508
161 Ga0439457_002779 3300042014 Bacteria 4896
162 Ga0466969_0043323 3300044656 Bacteria 2243
163 Ga0466969_0052371 3300044656 Bacteria 2005
164 Ga0466969_0100300 3300044656 Bacteria 1363
165 Ga0466969_0118955 3300044656 Bacteria 1231
166 Ga0466972_0600443 3300044658 Bacteria 520
167 Ga0466965_0144390 3300044683 Bacteria 1241
168 Ga0466966_0094998 3300044684 Bacteria 1847
169 Ga0466966_0159081 3300044684 Bacteria 1375
170 Ga0466961_0060221 3300044693 Bacteria 2414
171 Ga0466961_0166720 3300044693 Bacteria 1371
172 Ga0466961_0867455 3300044693 Bacteria 538
173 Ga0466963_0077322 3300044694 Bacteria 2248
174 Ga0466963_0381688 3300044694 Bacteria 993
175 Ga0466964_0112364 3300044706 Bacteria 1217
176 Ga0466964_0652794 3300044706 Bacteria 582
177 Ga0466971_0014651 3300044719 Bacteria 3451
178 Ga0466971_0052740 3300044719 Bacteria 1832
179 Ga0466971_0083253 3300044719 Bacteria 1461
180 Ga0466971_0107626 3300044719 Bacteria 1285
181 Ga0466971_0533271 3300044719 Bacteria 581
182 Ga0466968_0006180 3300044735 Bacteria 4502
183 Ga0466968_0022070 3300044735 Bacteria 2584
184 Ga0466968_0252089 3300044735 Bacteria 839
185 Ga0466968_0320567 3300044735 Bacteria 748
186 Ga0466970_0002553 3300044765 Bacteria 8783
187 Ga0466970_0007912 3300044765 Bacteria 5339
188 Ga0466970_0043186 3300044765 Bacteria 2398
189 Ga0466957_0402398 3300044842 Bacteria 936
190 Ga0466957_1354210 3300044842 Bacteria 517
191 Ga0466959_0079970 3300045049 Bacteria 2357
192 Ga0466959_0142687 3300045049 Bacteria 1691
193 Ga0466959_0318571 3300045049 Bacteria 1063
194 Ga0466958_0000539 3300045836 Bacteria 16055
195 Ga0466958_0050020 3300045836 Bacteria 2530
196 Ga0466958_0205349 3300045836 Bacteria 1254
197 Ga0466967_0026599 3300045976 Bacteria 4795
198 Ga0466967_0045515 3300045976 Bacteria 3813
199 Ga0466967_0050910 3300045976 Bacteria 3627
200 Ga0466967_0071227 3300045976 Bacteria 3112
201 Ga0466967_0073259 3300045976 Bacteria 3072
202 Ga0466967_0126292 3300045976 Bacteria 2370
203 Ga0466967_0202752 3300045976 Bacteria 1879
204 Ga0466967_0518036 3300045976 Bacteria 1172
205 Ga0466967_1794403 3300045976 Bacteria 611
206 Ga0466967_2092922 3300045976 Bacteria 562
207 Ga0496108_1065291 3300048911 Bacteria 688
208 Ga0501031_0118284 3300049568 Bacteria 1731
209 Ga0501032_0114183 3300049569 Bacteria 1786
210 Ga0501032_0232399 3300049569 Bacteria 1199
211 Ga0501032_0783586 3300049569 Bacteria 602
212 Ga0501032_0817957 3300049569 Bacteria 588
213 Ga0501033_0103240 3300049570 Bacteria 2079
214 Ga0501033_0206581 3300049570 Bacteria 1401
215 Ga0501034_0002674 3300049571 Bacteria 21031
216 Ga0501034_0012686 3300049571 Bacteria 8694
217 Ga0501036_0001835 3300049572 Bacteria 16492
218 Ga0501036_0169899 3300049572 Bacteria 1837
219 Ga0501037_0067006 3300049573 Bacteria 2614
220 Ga0501037_0885871 3300049573 Bacteria 586
221 Ga0501038_0133027 3300049574 Bacteria 2040
222 Ga0501038_0306392 3300049574 Bacteria 1245
223 Ga0501038_0325614 3300049574 Bacteria 1201
224 Ga0501039_0464718 3300049575 Bacteria 994
225 Ga0501042_0151850 3300049578 Bacteria 1670
226 Ga0501043_0032962 3300049579 Bacteria 4074
227 Ga0501043_0085059 3300049579 Bacteria 2485
228 Ga0501043_0099306 3300049579 Bacteria 2288
229 Ga0501046_0245133 3300049580 Bacteria 1320
230 Ga0501047_0000168 3300049581 Bacteria 80293
231 Ga0501047_0311181 3300049581 Bacteria 1415
232 Ga0501048_0054245 3300049582 Bacteria 2847
233 Ga0501068_0444940 3300049584 Bacteria 838
234 Ga0501070_0265112 3300049586 Bacteria 1403
235 Ga0501070_1172398 3300049586 Bacteria 590
236 Ga0501073_0386368 3300049589 Bacteria 967
237 Ga0501035_0007893 3300049822 Bacteria 9937
238 Ga0501035_0041859 3300049822 Bacteria 4134
239 Ga0501044_0646894 3300049823 Bacteria 946
240 Ga0501044_1382759 3300049823 Bacteria 569
241 nmdc:mga03n38_378991_c1 3300050490 Bacteria 775
242 nmdc:mga06r32_1519_c2 3300050510 Bacteria 7337
243 Ga0500573_0234451 3300053140 Bacteria 955
244 Ga0500579_126809 3300053143 Bacteria 1212
245 Ga0500616_0002431 3300053153 Bacteria 15504
246 Ga0501084_0417613 3300054114 Bacteria 1134
247 Ga0587082_115697 3300059504 Bacteria 600
248 Ga0587079_205792 3300059647 Bacteria 539
249 Ga0587111_0076510 3300060346 Bacteria 792
250 Ga0466962_0009632 3300061719 Bacteria 4633
251 Ga0466962_0181824 3300061719 Bacteria 1025
252 2753272660 2751185782 Bacteria 11227053
253 2862290876 2862290372 Bacteria 7471434
254 2919394256 2919391150 Bacteria 4884741
255 2945960889 2945956166 Bacteria 5110334
256 2990093037 2990088156 Bacteria 6657676
257 8056059446 8056054917 Bacteria 5736694
258 8056060596 8056060235 Bacteria 7259403
259 Ga0466970_0080689
260 Ga0006765J45826_108996
261 Ga0006778J45830_1032096
262 Ga0006778J45830_1051433
263 Ga0006759J45824_1029072
264 JGI25406J46586_10033692
265 Ga0006773J48901_11715
266 Ga0006770J48903_1009011
267 Ga0006770J48903_1012615
268 Ga0006777J48905_1002396
269 Ga0006777J48905_1019633
270 Ga0006777J48905_1038425
271 rootH1_10350540
272 Ga0007417J51691_1009656
273 Ga0007417J51691_1043651
274 Ga0007410J51695_1044621
275 Ga0007416J51690_1006603
276 Ga0007416J51690_1017689
277 Ga0007416J51690_1042606
278 Ga0007416J51690_1046884
279 Ga0007429J51699_1005358
280 Ga0007429J51699_1005886
281 Ga0007429J51699_1021622
282 Ga0007429J51699_1025778
283 Ga0007411J51799_117134
284 Ga0007415J51800_108509
285 Ga0007415J51800_112814
286 Ga0032354_1007940
287 Ga0032354_1011701
288 Ga0032354_1054497
289 Ga0006780_1015802
290 Ga0070683_100493185
291 Ga0070670_100497441
292 Ga0068869_100212332
293 Ga0068868_100257622
294 Ga0070661_100317971
295 Ga0070714_100387358
296 Ga0070663_100167011
297 Ga0070684_101401118
298 Ga0070693_100521278
299 Ga0070665_100220068
300 Ga0068855_102077489
301 Ga0070664_100901180
302 Ga0068857_101977408
303 Ga0068856_100328472
304 Ga0068864_100199592
305 Ga0068870_10044034
306 Ga0068860_100837986
307 Ga0068862_101143885
308 Ga0081539_10007048
309 Ga0070717_10612329
310 Ga0075363_100433106
311 Ga0075428_101871225
312 Ga0075431_100030586
313 Ga0111539_11455597
314 Ga0105247_11096708
315 Ga0105242_11543931
316 Ga0105237_10510922
317 Ga0105246_10101094
318 Ga0154017_11709
319 Ga0154016_133043
320 Ga0157374_11289122
321 Ga0157378_12283331
322 Ga0157375_11913416
323 Ga0163163_10205274
324 Ga0157380_12483768
325 Ga0157379_11104140
326 Ga0206349_1050683
327 Ga0206349_1141901
328 Ga0206349_1781243
329 Ga0206349_1885533
330 Ga0206351_10042940
331 Ga0206351_10128596
332 Ga0206351_10233048
333 Ga0206351_10385172
334 Ga0206351_10471445
335 Ga0206351_10923032
336 Ga0206351_10968796
337 Ga0206350_10234911
338 Ga0206350_10415845
339 Ga0206350_10859479
340 Ga0206350_10889988
341 Ga0206354_10547949
342 Ga0206354_11097899
343 Ga0206353_11053742
344 Ga0154015_1137403
345 Ga0154015_1273447
346 Ga0154015_1350065
347 Ga0154015_1507478
348 Ga0154015_1541538
349 Ga0213873_10000221
350 Ga0213873_10000332
351 Ga0213876_10114945
352 Ga0213875_10000123
353 Ga0213875_10014340
354 Ga0213875_10045325
355 Ga0213875_10064814
356 Ga0213875_10073190
357 Ga0224712_10051848
358 Ga0224712_10167252
359 Ga0224712_10251588
360 Ga0224712_10251921
361 Ga0224712_10444997
362 Ga0224712_10550870
363 Ga0207705_11250914
364 Ga0207694_10422099
365 Ga0207659_11723151
366 Ga0207687_10868615
367 Ga0207670_10502362
368 Ga0207691_10669211
369 Ga0207661_10473792
370 Ga0207677_10151094
371 Ga0207678_10057029
372 Ga0207678_10419722
373 Ga0207702_11345474
374 Ga0207648_10544842
375 Ga0207676_10673300
376 Ga0207676_11032092
377 Ga0207683_10205259
378 Ga0268266_10910386
379 Ga0268264_12087057
380 Ga0307515_10054847
381 Ga0311001_1094451
382 Ga0307512_10007676
383 Ga0307408_100379481
384 Ga0307508_10447060
385 Ga0307514_10398734
386 Ga0307405_11069411
387 Ga0307413_10169068
388 Ga0307410_10056133
389 Ga0307409_100024714
390 Ga0307411_11084901
391 Ga0307415_101324807
392 Ga0307415_101361503
393 Ga0307510_10155957
394 Ga0373951_0000093
395 Ga0373951_0005301
396 Ga0395899_0317225
397 Ga0436364_0475120
398 Ga0436364_0650058
399 Ga0436364_0661798
400 Ga0436364_0861133
401 Ga0436364_0952951
402 Ga0436365_0889716
403 Ga0436365_1092544
404 Ga0436365_1167623
405 Ga0436365_1878649
406 Ga0436362_0077710
407 Ga0436362_0341368
408 Ga0436362_1116497
409 Ga0436362_1210029
410 Ga0439436_0020925
411 Ga0439438_089679
412 Ga0439439_0033500
413 Ga0439439_0168523
414 Ga0439466_0014242
415 Ga0451789_0864428
416 Ga0439442_025411
417 Ga0439449_0002541
418 Ga0439449_0420155
419 Ga0439457_002779
420 Ga0466969_0043323
421 Ga0466969_0052371
422 Ga0466969_0100300
423 Ga0466969_0118955
424 Ga0466972_0600443
425 Ga0466965_0144390
426 Ga0466966_0094998
427 Ga0466966_0159081
428 Ga0466961_0060221
429 Ga0466961_0166720
430 Ga0466961_0867455
431 Ga0466963_0077322
432 Ga0466963_0381688
433 Ga0466964_0112364
434 Ga0466964_0652794
435 Ga0466971_0014651
436 Ga0466971_0052740
437 Ga0466971_0083253
438 Ga0466971_0107626
439 Ga0466971_0533271
440 Ga0466968_0006180
441 Ga0466968_0022070
442 Ga0466968_0252089
443 Ga0466968_0320567
444 Ga0466970_0002553
445 Ga0466970_0007912
446 Ga0466970_0043186
447 Ga0466957_0402398
448 Ga0466957_1354210
449 Ga0466959_0079970
450 Ga0466959_0142687
451 Ga0466959_0318571
452 Ga0466958_0000539
453 Ga0466958_0050020
454 Ga0466958_0205349
455 Ga0466967_0026599
456 Ga0466967_0045515
457 Ga0466967_0050910
458 Ga0466967_0071227
459 Ga0466967_0073259
460 Ga0466967_0126292
461 Ga0466967_0202752
462 Ga0466967_0518036
463 Ga0466967_1794403
464 Ga0466967_2092922
465 Ga0496108_1065291
466 Ga0501031_0118284
467 Ga0501032_0114183
468 Ga0501032_0232399
469 Ga0501032_0783586
470 Ga0501032_0817957
471 Ga0501033_0103240
472 Ga0501033_0206581
473 Ga0501034_0002674
474 Ga0501034_0012686
475 Ga0501036_0001835
476 Ga0501036_0169899
477 Ga0501037_0067006
478 Ga0501037_0885871
479 Ga0501038_0133027
480 Ga0501038_0306392
481 Ga0501038_0325614
482 Ga0501039_0464718
483 Ga0501042_0151850
484 Ga0501043_0032962
485 Ga0501043_0085059
486 Ga0501043_0099306
487 Ga0501046_0245133
488 Ga0501047_0000168
489 Ga0501047_0311181
490 Ga0501048_0054245
491 Ga0501068_0444940
492 Ga0501070_0265112
493 Ga0501070_1172398
494 Ga0501073_0386368
495 Ga0501035_0007893
496 Ga0501035_0041859
497 Ga0501044_0646894
498 Ga0501044_1382759
499 nmdc:mga03n38_378991_c1
500 nmdc:mga06r32_1519_c2
501 Ga0500573_0234451
502 Ga0500579_126809
503 Ga0500616_0002431
504 Ga0501084_0417613
505 Ga0587082_115697
506 Ga0587079_205792
507 Ga0587111_0076510
508 Ga0466962_0009632
509 Ga0466962_0181824
510 2753272660
511 2862290876
512 2919394256
513 2945960889
514 2990093037
515 8056059446
516 8056060596

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00011

HSP20

Hsp20/alpha crystallin family

51

151

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zul-assembly1.cif.gz_E-2 small heat shock protein from mycobacterium marinum m : form-3 0.9294 27 123
5zul-assembly1.cif.gz_E-2 small heat shock protein from mycobacterium marinum m : form-3 0.9099 27 123
5zul-assembly1.cif.gz_A-2 small heat shock protein from mycobacterium marinum m : form-3 0.9052 27 123
2h50-assembly1.cif.gz_P multiple distinct assemblies reveal conformational flexibility in the small heat shock protein hsp26 0.8954 33 122
5zul-assembly1.cif.gz_C-2 small heat shock protein from mycobacterium marinum m : form-3 0.8917 24 124
ID Description Score Start End Superfamily
5ds1C00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8889 32 122 2.60.40.790
5ds2D00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8858 32 122 2.60.40.790
af_Q0E4A8_70_176_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8682 33 135 2.60.40.790
5ds1C00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8618 32 122 2.60.40.790
af_Q208N7_181_285_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8605 29 124 2.60.40.790
ID Description Score Start End GO Terms
AF-A0A158AKB0-F1-model_v4 Heat shock protein Hsp20 0.9096 29 137
AF-A0A7M1SJM4-F1-model_v4 deleted 0.9061 29 122
AF-A0A7J8L7X3-F1-model_v4 SHSP domain-containing protein 0.8925 32 123
AF-A0A7C8EXH0-F1-model_v4 Hsp20/alpha crystallin family protein 0.88 20 137
AF-A0A0K9QNA4-F1-model_v4 deleted 0.8747 32 125

Map