F368914

General Info

Members Datasets Scaffolds Average Seq Length
259 169 518 272

Family's Representative Sequence

Representative Sequence 3300031250|Ga0265331_10003233|Ga0265331_100032339
Length 296
Sequence MRTDKQKGKQKGISVDLIDSHAHVDVSDFDADREAMLGRAQAAGVGTLLAIGNGPEIEKLGAAVPYAERYEWIYAAAGIHPHEARHATEAHYAELDRLARLPKLIAWGEIGLDYHYDHSPRDVQASVFHHQLDQARAAKRPVIIHCREAWPDCLRILDEAWRSSGLGGIFHCFTGTEGEALSGIDMGFLVSFAGNVTYPKAQNLRDVAGLLPLDKLLIETDSPFLAPQPHRGRRNEPAYVTEVARTIGNVRNLPAEEIAGVTAENFRRLFGISHSRTRSGAVPEEHHLTSDREGNL

Samples

Sample ID Description Type Environment
1 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
67 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
74 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
75 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
76 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
77 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
78 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
84 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
85 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
86 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
87 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
89 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
90 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
91 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
92 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
100 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
107 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
110 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
111 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
123 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
126 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
127 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
128 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
129 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
145 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
155 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
156 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
168 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
169 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.23
Metatranscriptomes 0.77
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.39
Nodule 0
Rhizoplane 4.63
Rhizosphere 91.51
Stem 0
Stem Tuber 0
Unclassified 12.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265331_10003233 3300031250 Bacteria 10612
2 Ga0065704_10152443 3300005289 Bacteria 1418
3 Ga0065707_10173179 3300005295 Unclassified 1469
4 Ga0070658_10023877 3300005327 Bacteria 4905
5 Ga0070676_10022407 3300005328 Bacteria 3541
6 Ga0070687_100185931 3300005343 Bacteria 1248
7 Ga0070661_100083604 3300005344 Bacteria 2358
8 Ga0070709_10007148 3300005434 Bacteria 6114
9 Ga0070713_100009591 3300005436 Bacteria 6943
10 Ga0070713_100163112 3300005436 Bacteria 1991
11 Ga0070710_10029861 3300005437 Bacteria 2928
12 Ga0070711_100007894 3300005439 Bacteria 6488
13 Ga0070711_100024857 3300005439 Bacteria 3913
14 Ga0070705_100000319 3300005440 Bacteria 28473
15 Ga0070694_100016044 3300005444 Bacteria 4715
16 Ga0070708_100002432 3300005445 Bacteria 14440
17 Ga0070706_100007333 3300005467 Bacteria 10345
18 Ga0070706_100011746 3300005467 Bacteria 8125
19 Ga0070707_100003104 3300005468 Bacteria 15725
20 Ga0070698_100078024 3300005471 Bacteria 3311
21 Ga0070699_100064383 3300005518 Unclassified 3180
22 Ga0070697_100000903 3300005536 Bacteria 22345
23 Ga0070695_100000619 3300005545 Bacteria 18832
24 Ga0070693_100000050 3300005547 Bacteria 44563
25 Ga0070665_100005952 3300005548 Bacteria 12491
26 Ga0070665_100323333 3300005548 Unclassified 1547
27 Ga0070704_100113925 3300005549 Bacteria 2063
28 Ga0070664_100003405 3300005564 Bacteria 12834
29 Ga0068860_100300404 3300005843 Bacteria 1573
30 Ga0081455_10108227 3300005937 Bacteria 2214
31 Ga0070715_10078263 3300006163 Bacteria 1494
32 Ga0070716_100001314 3300006173 Bacteria 10990
33 Ga0070716_100011164 3300006173 Bacteria 4521
34 Ga0070712_100008261 3300006175 Bacteria 6541
35 Ga0070712_100024531 3300006175 Bacteria 3998
36 Ga0070712_100034913 3300006175 Bacteria 3411
37 Ga0070712_100129888 3300006175 Bacteria 1908
38 Ga0097621_100014683 3300006237 Bacteria 5869
39 Ga0068871_100007190 3300006358 Bacteria 7942
40 Ga0075433_10215985 3300006852 Bacteria 1704
41 Ga0075434_100019951 3300006871 Bacteria 6492
42 Ga0075434_100399221 3300006871 Bacteria 1396
43 Ga0075436_100014957 3300006914 Bacteria 5319
44 Ga0075435_100188672 3300007076 Bacteria 1744
45 Ga0099794_10031200 3300007265 Bacteria 2494
46 Ga0099794_10046816 3300007265 Unclassified 2073
47 Ga0099794_10090490 3300007265 Bacteria 1518
48 Ga0099794_10127908 3300007265 Bacteria 1281
49 Ga0099795_10084306 3300007788 Bacteria 1221
50 Ga0105240_10035176 3300009093 Bacteria 6457
51 Ga0105240_10109935 3300009093 Bacteria 3337
52 Ga0105240_10112382 3300009093 Bacteria 3293
53 Ga0105240_10224153 3300009093 Unclassified 2188
54 Ga0111539_10589987 3300009094 Bacteria 1294
55 Ga0105245_10066043 3300009098 Bacteria 3273
56 Ga0105248_10534414 3300009177 Bacteria 1322
57 Ga0105249_10421199 3300009553 Unclassified 1369
58 Ga0099796_10001836 3300010159 Bacteria 4465
59 Ga0157373_10000209 3300013100 Bacteria 47989
60 Ga0157370_10018512 3300013104 Bacteria 7002
61 Ga0157370_10340449 3300013104 Unclassified 1383
62 Ga0157374_10019007 3300013296 Bacteria 6077
63 Ga0157378_10002812 3300013297 Bacteria 15521
64 Ga0157378_10003899 3300013297 Bacteria 13214
65 Ga0157375_10363620 3300013308 Unclassified 1613
66 Ga0157379_10569330 3300014968 Unclassified 1055
67 Ga0157376_10000040 3300014969 Bacteria 121140
68 Ga0157376_10152682 3300014969 Bacteria 2084
69 Ga0213876_10001192 3300021384 Bacteria 16432
70 Ga0213876_10031734 3300021384 Bacteria 2786
71 Ga0228598_1000495 3300024227 Bacteria 8140
72 Ga0228598_1003178 3300024227 Bacteria 3549
73 Ga0207699_10005492 3300025906 Bacteria 6070
74 Ga0207699_10010598 3300025906 Bacteria 4634
75 Ga0207705_10018908 3300025909 Bacteria 4926
76 Ga0207684_10004765 3300025910 Bacteria 12705
77 Ga0207684_10315631 3300025910 Bacteria 1347
78 Ga0207695_10165378 3300025913 Unclassified 2141
79 Ga0207695_10209206 3300025913 Unclassified 1862
80 Ga0207693_10024791 3300025915 Bacteria 4757
81 Ga0207693_10033694 3300025915 Unclassified 4041
82 Ga0207693_10045047 3300025915 Bacteria 3467
83 Ga0207693_10202099 3300025915 Bacteria 1563
84 Ga0207663_10037622 3300025916 Bacteria 2919
85 Ga0207663_10169460 3300025916 Unclassified 1549
86 Ga0207646_10000019 3300025922 Bacteria 282855
87 Ga0207687_10472576 3300025927 Unclassified 1043
88 Ga0207700_10023310 3300025928 Unclassified 4264
89 Ga0207665_10000011 3300025939 Bacteria 145201
90 Ga0207665_10000463 3300025939 Bacteria 27925
91 Ga0207665_10015440 3300025939 Bacteria 5013
92 Ga0207665_10044863 3300025939 Bacteria 2958
93 Ga0207679_10000726 3300025945 Bacteria 21877
94 Ga0268266_10002766 3300028379 Bacteria 18326
95 Ga0268264_10100590 3300028381 Bacteria 2511
96 Ga0265319_1003498 3300028563 Bacteria 8165
97 Ga0265318_10000076 3300028577 Bacteria 94026
98 Ga0265338_10003478 3300028800 Bacteria 22131
99 Ga0265338_10142296 3300028800 Bacteria 1877
100 Ga0265770_1000373 3300030878 Bacteria 6049
101 Ga0265760_10000021 3300031090 Bacteria 70611
102 Ga0265320_10000031 3300031240 Bacteria 147045
103 Ga0265325_10004648 3300031241 Bacteria 8614
104 Ga0265325_10010854 3300031241 Bacteria 5251
105 Ga0265329_10000227 3300031242 Bacteria 29823
106 Ga0265340_10013808 3300031247 Bacteria 4233
107 Ga0265339_10010181 3300031249 Bacteria 5855
108 Ga0265331_10000039 3300031250 Bacteria 194439
109 Ga0265316_10002167 3300031344 Bacteria 20639
110 Ga0265316_10003637 3300031344 Bacteria 15532
111 Ga0265313_10002434 3300031595 Bacteria 16069
112 Ga0265313_10098934 3300031595 Bacteria 1297
113 Ga0316575_10006553 3300031665 Bacteria 4194
114 Ga0265314_10005475 3300031711 Bacteria 11447
115 Ga0265342_10000151 3300031712 Bacteria 78868
116 Ga0316578_10022058 3300031728 Bacteria 3544
117 Ga0307414_10092322 3300032004 Bacteria 2253
118 Ga0307414_10129068 3300032004 Bacteria 1959
119 Ga0307510_10139182 3300033180 Unclassified 2076
120 Ga0316212_1000116 3300033547 Bacteria 8590
121 Ga0373926_0000216 3300035083 Bacteria 13543
122 Ga0373926_0002456 3300035083 Bacteria 5879
123 Ga0373934_0072456 3300035086 Bacteria 1379
124 Ga0373923_0007777 3300035111 Bacteria 3787
125 Ga0373941_0056601 3300035115 Bacteria 1263
126 Ga0373953_0019691 3300035117 Bacteria 2513
127 Ga0373954_0001668 3300035118 Bacteria 9092
128 Ga0373954_0194353 3300035118 Unclassified 996
129 Ga0373956_0004977 3300035119 Bacteria 5326
130 Ga0373957_0007375 3300035120 Bacteria 3518
131 Ga0373955_0034819 3300035172 Bacteria 2663
132 Ga0373955_0088072 3300035172 Bacteria 1765
133 Ga0373955_0217237 3300035172 Unclassified 1141
134 Ga0316574_0006176 3300035398 Bacteria 6453
135 Ga0373927_0004007 3300035695 Bacteria 10424
136 Ga0373933_0005085 3300035724 Bacteria 7171
137 Ga0373947_0021605 3300035725 Bacteria 3726
138 Ga0373947_0032237 3300035725 Bacteria 3087
139 Ga0373937_0034443 3300036401 Bacteria 4606
140 Ga0373937_0038261 3300036401 Bacteria 4372
141 Ga0373937_0141845 3300036401 Bacteria 2248
142 Ga0316582_0255951 3300036647 Bacteria 1200
143 Ga0316584_0013454 3300036712 Bacteria 5791
144 Ga0316584_0018886 3300036712 Bacteria 4979
145 Ga0373925_0003254 3300037068 Bacteria 12661
146 Ga0395899_0271379 3300037312 Bacteria 1157
147 Ga0395898_0640805 3300037466 Bacteria 1005
148 Ga0395905_1056249 3300037471 Bacteria 715
149 Ga0436364_0470399 3300037853 Bacteria 4094
150 Ga0400486_24918 3300038742 Bacteria 2818
151 Ga0400487_18518 3300039110 Bacteria 2368
152 Ga0436365_0063984 3300039437 Bacteria 58919
153 Ga0436362_0707584 3300039453 Bacteria 2717
154 Ga0439460_0030991 3300042461 Bacteria 1523
155 Ga0450893_0005252 3300042532 Bacteria 2074
156 Ga0451577_0000959 3300042876 Bacteria 42235
157 Ga0451577_0039567 3300042876 Bacteria 4237
158 Ga0453683_0006034 3300044673 Bacteria 8349
159 Ga0453683_0009366 3300044673 Bacteria 6542
160 Ga0453684_0002371 3300044712 Bacteria 46003
161 Ga0453684_0041201 3300044712 Bacteria 6252
162 Ga0453684_0212913 3300044712 Bacteria 2245
163 Ga0451576_0022643 3300045051 Bacteria 6808
164 Ga0495592_0106512 3300046454 Bacteria 1990
165 Ga0495603_0021243 3300046455 Bacteria 3930
166 Ga0495629_0077965 3300046459 Bacteria 2313
167 Ga0495629_0203346 3300046459 Bacteria 1369
168 Ga0495641_0052692 3300046461 Bacteria 1854
169 Ga0495651_0000179 3300046462 Bacteria 46918
170 Ga0495651_0142497 3300046462 Bacteria 1736
171 Ga0495580_0000425 3300046472 Bacteria 34879
172 Ga0495580_0037497 3300046472 Bacteria 3478
173 Ga0495580_0047759 3300046472 Bacteria 3034
174 Ga0495580_0090534 3300046472 Bacteria 2130
175 Ga0495582_0000220 3300046473 Bacteria 31609
176 Ga0495582_0004089 3300046473 Bacteria 8196
177 Ga0495582_0043957 3300046473 Unclassified 2460
178 Ga0495639_0008032 3300046475 Bacteria 4532
179 Ga0495664_0023886 3300046477 Bacteria 3550
180 Ga0495608_0024334 3300046511 Unclassified 4142
181 Ga0495608_0042117 3300046511 Bacteria 3054
182 Ga0495618_0029628 3300046514 Bacteria 3415
183 Ga0495628_0007194 3300046516 Bacteria 9637
184 Ga0495630_0003789 3300046517 Bacteria 10545
185 Ga0495630_0107723 3300046517 Unclassified 2110
186 Ga0495666_0003663 3300046526 Bacteria 7759
187 Ga0495666_0010936 3300046526 Bacteria 4525
188 Ga0495666_0151838 3300046526 Unclassified 1077
189 Ga0495652_0009530 3300046529 Bacteria 8822
190 Ga0495665_0004310 3300046531 Bacteria 7686
191 Ga0495665_0056998 3300046531 Bacteria 2062
192 Ga0495586_0015940 3300046535 Bacteria 3998
193 Ga0495586_0022456 3300046535 Bacteria 3367
194 Ga0495587_0009085 3300046536 Bacteria 6379
195 Ga0495587_0054636 3300046536 Bacteria 2353
196 Ga0495645_0062676 3300046543 Bacteria 2693
197 Ga0495667_0000289 3300046559 Bacteria 32499
198 Ga0495667_0116636 3300046559 Bacteria 1725
199 Ga0495634_0101984 3300046642 Bacteria 1853
200 Ga0495635_0050129 3300046663 Bacteria 2878
201 Ga0495635_0218761 3300046663 Unclassified 1288
202 Ga0495657_0001932 3300046675 Bacteria 17665
203 Ga0495657_0058255 3300046675 Bacteria 2565
204 Ga0495657_0276400 3300046675 Unclassified 1006
205 Ga0495623_0017574 3300046679 Bacteria 4619
206 Ga0495623_0045911 3300046679 Bacteria 2773
207 Ga0495623_0071604 3300046679 Bacteria 2157
208 Ga0495646_0010181 3300046680 Bacteria 5977
209 Ga0495647_0052501 3300046681 Bacteria 1588
210 Ga0495658_0031122 3300046683 Bacteria 2903
211 Ga0495613_0012922 3300046689 Bacteria 6206
212 Ga0495613_0072667 3300046689 Unclassified 2508
213 Ga0495613_0078240 3300046689 Bacteria 2406
214 Ga0495613_0335217 3300046689 Bacteria 1042
215 Ga0495624_0017376 3300046690 Bacteria 4831
216 Ga0495624_0056283 3300046690 Bacteria 2475
217 Ga0495600_0182265 3300046809 Bacteria 1353
218 Ga0495604_0002290 3300047317 Bacteria 15335
219 Ga0495604_0031982 3300047317 Bacteria 4171
220 Ga0495674_0017535 3300047319 Bacteria 6664
221 Ga0495674_0018311 3300047319 Bacteria 6521
222 Ga0495674_0121428 3300047319 Bacteria 2207
223 Ga0495676_0017503 3300047321 Bacteria 6336
224 Ga0495676_0183789 3300047321 Bacteria 1463
225 Ga0495680_0001189 3300047322 Bacteria 28562
226 Ga0495675_0030472 3300047444 Bacteria 3442
227 Ga0495675_0059380 3300047444 Bacteria 2424
228 Ga0495684_0001204 3300047471 Bacteria 20792
229 Ga0495684_0106861 3300047471 Bacteria 2114
230 Ga0495684_0173713 3300047471 Unclassified 1601
231 Ga0495684_0189404 3300047471 Bacteria 1521
232 Ga0495593_0047760 3300047673 Bacteria 2276
233 Ga0495602_0008789 3300048088 Bacteria 10540
234 Ga0495602_0300312 3300048088 Unclassified 1175
235 Ga0495614_0006134 3300048089 Bacteria 5402
236 Ga0495614_0026457 3300048089 Bacteria 2500
237 Ga0496100_0099751 3300048903 Bacteria 1999
238 Ga0496100_0246727 3300048903 Unclassified 1319
239 Ga0496101_0056469 3300048904 Bacteria 2839
240 Ga0496102_0579525 3300048905 Unclassified 1045
241 Ga0496112_0140625 3300048915 Bacteria 2383
242 Ga0496112_0234328 3300048915 Bacteria 1790
243 Ga0496114_0012541 3300048917 Bacteria 6788
244 Ga0496114_0148574 3300048917 Bacteria 2032
245 Ga0496115_0006930 3300048918 Bacteria 8327
246 Ga0496115_0019124 3300048918 Bacteria 5268
247 Ga0496115_0056588 3300048918 Bacteria 3152
248 Ga0496115_0071598 3300048918 Bacteria 2812
249 Ga0496121_0132450 3300048924 Unclassified 1863
250 Ga0501032_0019475 3300049569 Bacteria 4747
251 Ga0501070_0369952 3300049586 Bacteria 1162
252 nmdc:mga08y16_730423_c1 3300050511 Bacteria 988
253 nmdc:mga0n895_381170_c1 3300050512 Bacteria 1427
254 nmdc:mga0n895_90886_c1 3300050512 Unclassified 3055
255 nmdc:mga08x19_375463_c1 3300050514 Bacteria 995
256 nmdc:mga08x19_46192_c1 3300050514 Unclassified 2785
257 nmdc:mga0a205_77782_c1 3300050515 Bacteria 2063
258 Ga0495612_0003522 3300053078 Bacteria 6487
259 Ga0500639_065377 3300053163 Bacteria 1866
260 Ga0265331_10003233
261 Ga0065704_10152443
262 Ga0065707_10173179
263 Ga0070658_10023877
264 Ga0070676_10022407
265 Ga0070687_100185931
266 Ga0070661_100083604
267 Ga0070709_10007148
268 Ga0070713_100009591
269 Ga0070713_100163112
270 Ga0070710_10029861
271 Ga0070711_100007894
272 Ga0070711_100024857
273 Ga0070705_100000319
274 Ga0070694_100016044
275 Ga0070708_100002432
276 Ga0070706_100007333
277 Ga0070706_100011746
278 Ga0070707_100003104
279 Ga0070698_100078024
280 Ga0070699_100064383
281 Ga0070697_100000903
282 Ga0070695_100000619
283 Ga0070693_100000050
284 Ga0070665_100005952
285 Ga0070665_100323333
286 Ga0070704_100113925
287 Ga0070664_100003405
288 Ga0068860_100300404
289 Ga0081455_10108227
290 Ga0070715_10078263
291 Ga0070716_100001314
292 Ga0070716_100011164
293 Ga0070712_100008261
294 Ga0070712_100024531
295 Ga0070712_100034913
296 Ga0070712_100129888
297 Ga0097621_100014683
298 Ga0068871_100007190
299 Ga0075433_10215985
300 Ga0075434_100019951
301 Ga0075434_100399221
302 Ga0075436_100014957
303 Ga0075435_100188672
304 Ga0099794_10031200
305 Ga0099794_10046816
306 Ga0099794_10090490
307 Ga0099794_10127908
308 Ga0099795_10084306
309 Ga0105240_10035176
310 Ga0105240_10109935
311 Ga0105240_10112382
312 Ga0105240_10224153
313 Ga0111539_10589987
314 Ga0105245_10066043
315 Ga0105248_10534414
316 Ga0105249_10421199
317 Ga0099796_10001836
318 Ga0157373_10000209
319 Ga0157370_10018512
320 Ga0157370_10340449
321 Ga0157374_10019007
322 Ga0157378_10002812
323 Ga0157378_10003899
324 Ga0157375_10363620
325 Ga0157379_10569330
326 Ga0157376_10000040
327 Ga0157376_10152682
328 Ga0213876_10001192
329 Ga0213876_10031734
330 Ga0228598_1000495
331 Ga0228598_1003178
332 Ga0207699_10005492
333 Ga0207699_10010598
334 Ga0207705_10018908
335 Ga0207684_10004765
336 Ga0207684_10315631
337 Ga0207695_10165378
338 Ga0207695_10209206
339 Ga0207693_10024791
340 Ga0207693_10033694
341 Ga0207693_10045047
342 Ga0207693_10202099
343 Ga0207663_10037622
344 Ga0207663_10169460
345 Ga0207646_10000019
346 Ga0207687_10472576
347 Ga0207700_10023310
348 Ga0207665_10000011
349 Ga0207665_10000463
350 Ga0207665_10015440
351 Ga0207665_10044863
352 Ga0207679_10000726
353 Ga0268266_10002766
354 Ga0268264_10100590
355 Ga0265319_1003498
356 Ga0265318_10000076
357 Ga0265338_10003478
358 Ga0265338_10142296
359 Ga0265770_1000373
360 Ga0265760_10000021
361 Ga0265320_10000031
362 Ga0265325_10004648
363 Ga0265325_10010854
364 Ga0265329_10000227
365 Ga0265340_10013808
366 Ga0265339_10010181
367 Ga0265331_10000039
368 Ga0265316_10002167
369 Ga0265316_10003637
370 Ga0265313_10002434
371 Ga0265313_10098934
372 Ga0316575_10006553
373 Ga0265314_10005475
374 Ga0265342_10000151
375 Ga0316578_10022058
376 Ga0307414_10092322
377 Ga0307414_10129068
378 Ga0307510_10139182
379 Ga0316212_1000116
380 Ga0373926_0000216
381 Ga0373926_0002456
382 Ga0373934_0072456
383 Ga0373923_0007777
384 Ga0373941_0056601
385 Ga0373953_0019691
386 Ga0373954_0001668
387 Ga0373954_0194353
388 Ga0373956_0004977
389 Ga0373957_0007375
390 Ga0373955_0034819
391 Ga0373955_0088072
392 Ga0373955_0217237
393 Ga0316574_0006176
394 Ga0373927_0004007
395 Ga0373933_0005085
396 Ga0373947_0021605
397 Ga0373947_0032237
398 Ga0373937_0034443
399 Ga0373937_0038261
400 Ga0373937_0141845
401 Ga0316582_0255951
402 Ga0316584_0013454
403 Ga0316584_0018886
404 Ga0373925_0003254
405 Ga0395899_0271379
406 Ga0395898_0640805
407 Ga0395905_1056249
408 Ga0436364_0470399
409 Ga0400486_24918
410 Ga0400487_18518
411 Ga0436365_0063984
412 Ga0436362_0707584
413 Ga0439460_0030991
414 Ga0450893_0005252
415 Ga0451577_0000959
416 Ga0451577_0039567
417 Ga0453683_0006034
418 Ga0453683_0009366
419 Ga0453684_0002371
420 Ga0453684_0041201
421 Ga0453684_0212913
422 Ga0451576_0022643
423 Ga0495592_0106512
424 Ga0495603_0021243
425 Ga0495629_0077965
426 Ga0495629_0203346
427 Ga0495641_0052692
428 Ga0495651_0000179
429 Ga0495651_0142497
430 Ga0495580_0000425
431 Ga0495580_0037497
432 Ga0495580_0047759
433 Ga0495580_0090534
434 Ga0495582_0000220
435 Ga0495582_0004089
436 Ga0495582_0043957
437 Ga0495639_0008032
438 Ga0495664_0023886
439 Ga0495608_0024334
440 Ga0495608_0042117
441 Ga0495618_0029628
442 Ga0495628_0007194
443 Ga0495630_0003789
444 Ga0495630_0107723
445 Ga0495666_0003663
446 Ga0495666_0010936
447 Ga0495666_0151838
448 Ga0495652_0009530
449 Ga0495665_0004310
450 Ga0495665_0056998
451 Ga0495586_0015940
452 Ga0495586_0022456
453 Ga0495587_0009085
454 Ga0495587_0054636
455 Ga0495645_0062676
456 Ga0495667_0000289
457 Ga0495667_0116636
458 Ga0495634_0101984
459 Ga0495635_0050129
460 Ga0495635_0218761
461 Ga0495657_0001932
462 Ga0495657_0058255
463 Ga0495657_0276400
464 Ga0495623_0017574
465 Ga0495623_0045911
466 Ga0495623_0071604
467 Ga0495646_0010181
468 Ga0495647_0052501
469 Ga0495658_0031122
470 Ga0495613_0012922
471 Ga0495613_0072667
472 Ga0495613_0078240
473 Ga0495613_0335217
474 Ga0495624_0017376
475 Ga0495624_0056283
476 Ga0495600_0182265
477 Ga0495604_0002290
478 Ga0495604_0031982
479 Ga0495674_0017535
480 Ga0495674_0018311
481 Ga0495674_0121428
482 Ga0495676_0017503
483 Ga0495676_0183789
484 Ga0495680_0001189
485 Ga0495675_0030472
486 Ga0495675_0059380
487 Ga0495684_0001204
488 Ga0495684_0106861
489 Ga0495684_0173713
490 Ga0495684_0189404
491 Ga0495593_0047760
492 Ga0495602_0008789
493 Ga0495602_0300312
494 Ga0495614_0006134
495 Ga0495614_0026457
496 Ga0496100_0099751
497 Ga0496100_0246727
498 Ga0496101_0056469
499 Ga0496102_0579525
500 Ga0496112_0140625
501 Ga0496112_0234328
502 Ga0496114_0012541
503 Ga0496114_0148574
504 Ga0496115_0006930
505 Ga0496115_0019124
506 Ga0496115_0056588
507 Ga0496115_0071598
508 Ga0496121_0132450
509 Ga0501032_0019475
510 Ga0501070_0369952
511 nmdc:mga08y16_730423_c1
512 nmdc:mga0n895_381170_c1
513 nmdc:mga0n895_90886_c1
514 nmdc:mga08x19_375463_c1
515 nmdc:mga08x19_46192_c1
516 nmdc:mga0a205_77782_c1
517 Ga0495612_0003522
518 Ga0500639_065377

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01026

TatD_DNase

TatD related DNase

18

271

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gzx-assembly2.cif.gz_B crystal structure of the tatd deoxyribonuclease mw0446 from staphylococcus aureus. northeast structural genomics consortium target zr237. 0.9318 2 263
1j6o-assembly1.cif.gz_A crystal structure of tatd-related deoxyribonuclease (tm0667) from thermotoga maritima at 1.8 a resolution 0.9275 2 268
2gzx-assembly2.cif.gz_B crystal structure of the tatd deoxyribonuclease mw0446 from staphylococcus aureus. northeast structural genomics consortium target zr237. 0.9247 2 263
1zzm-assembly1.cif.gz_A crystal structure of yjjv, tatd homolog from escherichia coli k12, at 1.8 a resolution 0.9212 2 266
1xwy-assembly1.cif.gz_A crystal structure of tatd deoxyribonuclease from escherichia coli k12 at 2.0 a resolution 0.9139 2 266
ID Description Score Start End Superfamily
af_P39408_1_259_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.941 2 266 3.20.20.140
2gzxB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9323 2 263 3.20.20.140
1j6oA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9267 2 268 3.20.20.140
2gzxB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9251 2 263 3.20.20.140
af_P39408_1_259_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9234 2 266 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A2E8M8E4-F1-model_v4 DNAase 0.9939 2 265 GO:0004536
GO:0046872
AF-A0A257M0B2-F1-model_v4 DNAase 0.9913 1 269 GO:0004536
GO:0046872
AF-A0A2E8M8E4-F1-model_v4 DNAase 0.9865 2 265 GO:0004536
GO:0046872
AF-A0A7Y1Y3I8-F1-model_v4 TatD family hydrolase 0.9846 1 218 GO:0016788
GO:0046872
AF-A0A257M0B2-F1-model_v4 DNAase 0.984 1 269 GO:0004536
GO:0046872

Map