F368884

General Info

Members Datasets Scaffolds Average Seq Length
259 206 518 357

Family's Representative Sequence

Representative Sequence 3300025972|Ga0207668_10274124|Ga0207668_102741241
Length 421
Sequence MPSERSVPGRGLPTWAQQCLDVPDVPGSSRVAFVAAGLALAARGSAVRRGHRVRWLTMSEKIRVAVVFGGRSSEHTISCLSAGSVLGNLDPERFEAVPVGITREGRWVLGTGDSAQLAIRGRELPSVDDGKGLVLAGDPSSQGLVAVEPGRESEMLSRVDAVFPVLHGAFGEDGTIQGLLELAGIPYVGPGVLASAAAMDKETAKKLLAAEGLPVGTYAALRRGQSTLDEDDKARLGLPVFVKPSRAGSSVGISRVAEWDDLDAAIELARATDPKVLVEAAVVGREVECGVLEFPDGRVEASLPAEIRVLSEDENAWYDFETKYLGEDAELDIPAKLDDALTEKLRAMAVEAFRALDCQGLARVDFFVGADGELTINEVNTMPGFTTKSAYPKMWEVTGMDYTTLLTTLIETAIARGTGLR

Samples

Sample ID Description Type Environment
1 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
85 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
86 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
100 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
101 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
102 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
145 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
160 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
161 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
162 2547132424 Nocardia nova SH22a Isolate Unclassified
163 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
164 2558860280 Kutzneria sp. 744 Isolate Unclassified
165 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
166 2582580736 Prauserella sp. Am3 Isolate Unclassified
167 2643221692 Nocardia sp. Root136 Isolate Unclassified
168 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
169 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
170 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
171 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
172 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
173 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
174 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
175 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
176 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
177 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
178 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
179 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
180 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
181 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
182 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
183 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
184 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
185 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
186 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
187 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
188 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
189 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
190 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
191 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
192 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
193 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
194 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
195 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
196 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
197 2922554459 Rhodococcus sp. 66b Isolate Unclassified
198 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
199 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
200 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
201 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
202 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
203 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
204 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
205 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
206 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.63
Metatranscriptomes 0
Isolates 17.37

Biome Distribution

Category Percentage (%)
Aerial Root 0.39
Bulb 0
Endosphere 4.25
Nodule 0
Rhizoplane 11.2
Rhizosphere 60.23
Stem 0
Stem Tuber 0.39
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207668_10274124 3300025972 Bacteria 1380
2 JGI25406J46586_10000620 3300003203 Bacteria 16621
3 Ga0055540_1000057 3300003792 Bacteria 136356
4 Ga0070658_10000833 3300005327 Bacteria 26391
5 Ga0068869_100246321 3300005334 Bacteria 1426
6 Ga0070666_10018120 3300005335 Bacteria 4522
7 Ga0068868_100010836 3300005338 Bacteria 6613
8 Ga0070660_100030119 3300005339 Bacteria 4069
9 Ga0070692_10008789 3300005345 Bacteria 4520
10 Ga0070668_100056613 3300005347 Bacteria 3028
11 Ga0070669_100080807 3300005353 Bacteria 2420
12 Ga0070659_100064428 3300005366 Bacteria 2901
13 Ga0070667_100014387 3300005367 Bacteria 6539
14 Ga0070714_100037008 3300005435 Bacteria 4098
15 Ga0070710_10000170 3300005437 Bacteria 30007
16 Ga0070694_100014628 3300005444 Bacteria 4914
17 Ga0070663_100005770 3300005455 Bacteria 7386
18 Ga0070662_100001436 3300005457 Bacteria 14686
19 Ga0070686_100053070 3300005544 Bacteria 2587
20 Ga0070665_100123477 3300005548 Bacteria 2591
21 Ga0070704_100008718 3300005549 Bacteria 6100
22 Ga0068855_100010280 3300005563 Bacteria 11287
23 Ga0068855_100207155 3300005563 Bacteria 2206
24 Ga0068854_100006379 3300005578 Bacteria 7504
25 Ga0068856_100305017 3300005614 Bacteria 1610
26 Ga0070702_100008818 3300005615 Bacteria 4903
27 Ga0068864_100058536 3300005618 Bacteria 3331
28 Ga0068861_100003837 3300005719 Bacteria 10034
29 Ga0068863_100005297 3300005841 Bacteria 12732
30 Ga0068858_100227902 3300005842 Bacteria 1766
31 Ga0081539_10001153 3300005985 Bacteria 47882
32 Ga0070717_10026077 3300006028 Bacteria 4658
33 Ga0075365_10032255 3300006038 Bacteria 3365
34 Ga0075364_10166755 3300006051 Bacteria 1488
35 Ga0075369_10003018 3300006186 Bacteria 6088
36 Ga0068871_100099806 3300006358 Bacteria 2431
37 Ga0075435_100028027 3300007076 Bacteria 4414
38 Ga0105245_10004200 3300009098 Bacteria 12788
39 Ga0105247_10012543 3300009101 Bacteria 5091
40 Ga0105247_10189395 3300009101 Bacteria 1377
41 Ga0105241_10006666 3300009174 Bacteria 8496
42 Ga0105237_10043199 3300009545 Bacteria 4542
43 Ga0105238_10059544 3300009551 Bacteria 3825
44 Ga0105249_10002004 3300009553 Bacteria 17684
45 Ga0105246_10128846 3300011119 Bacteria 1887
46 Ga0157371_10018315 3300013102 Bacteria 5179
47 Ga0157370_10014338 3300013104 Bacteria 8109
48 Ga0157369_10082282 3300013105 Bacteria 3444
49 Ga0157374_10006922 3300013296 Bacteria 9642
50 Ga0163162_10036762 3300013306 Bacteria 4883
51 Ga0157379_10008934 3300014968 Bacteria 8734
52 Ga0157376_10014113 3300014969 Bacteria 5984
53 Ga0163161_10008040 3300017792 Bacteria 7298
54 Ga0213873_10000052 3300021358 Bacteria 25748
55 Ga0213876_10026509 3300021384 Bacteria 3056
56 Ga0213875_10001713 3300021388 Bacteria 13768
57 Ga0213875_10018551 3300021388 Bacteria 3352
58 Ga0209051_1000075 3300025303 Bacteria 205011
59 Ga0209051_1025186 3300025303 Bacteria 2428
60 Ga0207656_10023582 3300025321 Bacteria 2479
61 Ga0207692_10000293 3300025898 Bacteria 17337
62 Ga0207642_10031160 3300025899 Bacteria 2230
63 Ga0207710_10047837 3300025900 Bacteria 1913
64 Ga0207688_10001019 3300025901 Bacteria 14313
65 Ga0207680_10169223 3300025903 Bacteria 1471
66 Ga0207705_10000006 3300025909 Bacteria 657147
67 Ga0207693_10000510 3300025915 Bacteria 35052
68 Ga0207657_10003758 3300025919 Bacteria 16133
69 Ga0207681_10075287 3300025923 Bacteria 2367
70 Ga0207687_10028821 3300025927 Bacteria 3731
71 Ga0207664_10019929 3300025929 Bacteria 4965
72 Ga0207690_10042039 3300025932 Bacteria 2999
73 Ga0207706_10003673 3300025933 Bacteria 14654
74 Ga0207665_10005316 3300025939 Bacteria 8605
75 Ga0207711_10128778 3300025941 Bacteria 2267
76 Ga0207667_10043167 3300025949 Bacteria 4786
77 Ga0207651_10023029 3300025960 Bacteria 3823
78 Ga0207712_10009542 3300025961 Bacteria 6142
79 Ga0207668_10038781 3300025972 Bacteria 3201
80 Ga0207668_10069942 3300025972 Bacteria 2501
81 Ga0207677_10081576 3300026023 Bacteria 2321
82 Ga0207703_10035387 3300026035 Bacteria 3968
83 Ga0207639_10019546 3300026041 Bacteria 4833
84 Ga0207678_10000077 3300026067 Bacteria 78930
85 Ga0207641_10005178 3300026088 Bacteria 11144
86 Ga0207641_10136949 3300026088 Bacteria 2205
87 Ga0207674_10284150 3300026116 Bacteria 1603
88 Ga0207675_100006001 3300026118 Bacteria 11560
89 Ga0268266_10073414 3300028379 Bacteria 2969
90 Ga0307515_10104957 3300028794 Bacteria 3369
91 Ga0307511_10091152 3300030521 Bacteria 2065
92 Ga0314311_1047800 3300030733 Bacteria 2503
93 Ga0316180_1009522 3300030736 Bacteria 4114
94 Ga0265327_10002239 3300031251 Bacteria 20978
95 Ga0307513_10041796 3300031456 Bacteria 5055
96 Ga0307413_10034940 3300031824 Bacteria 2878
97 Ga0307410_10190609 3300031852 Bacteria 1559
98 Ga0307409_100212211 3300031995 Bacteria 1741
99 Ga0307411_10009511 3300032005 Bacteria 5116
100 Ga0307507_10011582 3300033179 Bacteria 11090
101 Ga0307507_10073192 3300033179 Bacteria 3082
102 Ga0373932_0014360 3300035112 Bacteria 1990
103 Ga0373956_0013567 3300035119 Bacteria 3390
104 Ga0436364_0473109 3300037853 Bacteria 35842
105 Ga0436364_1485205 3300037853 Bacteria 11763
106 Ga0436365_1625999 3300039437 Bacteria 4058
107 Ga0436362_0345588 3300039453 Bacteria 54446
108 Ga0451791_0105917 3300041451 Bacteria 2755
109 Ga0451800_0022302 3300041459 Bacteria 2092
110 Ga0451833_0085159 3300041491 Bacteria 3124
111 Ga0451853_1716496 3300041512 Bacteria 2154
112 Ga0451853_3032763 3300041512 Bacteria 2984
113 Ga0466969_0015116 3300044656 Bacteria 4048
114 Ga0466972_0002149 3300044658 Bacteria 9683
115 Ga0466965_0000195 3300044683 Bacteria 18846
116 Ga0466965_0117341 3300044683 Bacteria 1372
117 Ga0466966_0013518 3300044684 Bacteria 5404
118 Ga0466966_0013771 3300044684 Bacteria 5351
119 Ga0466966_0107399 3300044684 Bacteria 1722
120 Ga0466966_0291282 3300044684 Bacteria 981
121 Ga0466961_0038196 3300044693 Bacteria 3079
122 Ga0466961_0146475 3300044693 Bacteria 1476
123 Ga0466961_0218643 3300044693 Bacteria 1175
124 Ga0466963_0000150 3300044694 Bacteria 27879
125 Ga0466963_0032598 3300044694 Bacteria 3375
126 Ga0466963_0063445 3300044694 Bacteria 2473
127 Ga0453684_0006841 3300044712 Bacteria 21425
128 Ga0466971_0015419 3300044719 Bacteria 3364
129 Ga0466971_0020160 3300044719 Bacteria 2964
130 Ga0466971_0046300 3300044719 Bacteria 1955
131 Ga0466968_0031533 3300044735 Bacteria 2200
132 Ga0466968_0039325 3300044735 Bacteria 1991
133 Ga0466970_0093628 3300044765 Bacteria 1632
134 Ga0466957_0000576 3300044842 Bacteria 18522
135 Ga0466960_0126540 3300044901 Bacteria 1344
136 Ga0466959_0000245 3300045049 Bacteria 33869
137 Ga0466959_0002480 3300045049 Bacteria 11812
138 Ga0466959_0192820 3300045049 Bacteria 1421
139 Ga0466958_0000070 3300045836 Bacteria 30511
140 Ga0466958_0201538 3300045836 Bacteria 1266
141 Ga0466967_0003549 3300045976 Bacteria 10216
142 Ga0466967_0029001 3300045976 Bacteria 4627
143 Ga0466967_0060057 3300045976 Bacteria 3367
144 Ga0466967_0124333 3300045976 Bacteria 2388
145 Ga0495638_0006195 3300046460 Bacteria 8737
146 Ga0495607_0034094 3300046501 Bacteria 3091
147 Ga0495668_0000573 3300046616 Bacteria 45058
148 Ga0495672_0011168 3300047320 Bacteria 6350
149 Ga0495683_0006418 3300047323 Bacteria 6428
150 Ga0496100_0000009 3300048903 Bacteria 225785
151 Ga0496100_0005904 3300048903 Bacteria 6634
152 Ga0496100_0083543 3300048903 Bacteria 2162
153 Ga0496101_0000018 3300048904 Bacteria 236102
154 Ga0496101_0004524 3300048904 Bacteria 8777
155 Ga0496101_0125989 3300048904 Bacteria 1941
156 Ga0496102_0000902 3300048905 Bacteria 28176
157 Ga0496102_0004997 3300048905 Bacteria 11234
158 Ga0496103_0000473 3300048906 Bacteria 33859
159 Ga0496103_0000606 3300048906 Bacteria 28166
160 Ga0496105_0020229 3300048908 Bacteria 5378
161 Ga0496106_0005623 3300048909 Bacteria 9277
162 Ga0496107_0001464 3300048910 Bacteria 14605
163 Ga0496107_0106496 3300048910 Bacteria 2059
164 Ga0496108_0002519 3300048911 Bacteria 14657
165 Ga0496108_0078946 3300048911 Bacteria 2786
166 Ga0496109_0050467 3300048912 Bacteria 3789
167 Ga0496109_0089899 3300048912 Bacteria 2840
168 Ga0496110_0003391 3300048913 Bacteria 12176
169 Ga0496110_0008263 3300048913 Bacteria 8369
170 Ga0496111_0031077 3300048914 Bacteria 3802
171 Ga0496111_0032779 3300048914 Bacteria 3704
172 Ga0496112_0038789 3300048915 Bacteria 4653
173 Ga0496114_0000136 3300048917 Bacteria 53108
174 Ga0496114_0089122 3300048917 Bacteria 2618
175 Ga0496114_0131664 3300048917 Bacteria 2160
176 Ga0496115_0041137 3300048918 Bacteria 3676
177 Ga0496116_0001191 3300048919 Bacteria 30525
178 Ga0496116_0007358 3300048919 Bacteria 9782
179 Ga0496117_0000242 3300048920 Bacteria 103350
180 Ga0496117_0008840 3300048920 Bacteria 9504
181 Ga0496118_0000412 3300048921 Bacteria 71447
182 Ga0496118_0007965 3300048921 Bacteria 11078
183 Ga0496119_0000061 3300048922 Bacteria 171442
184 Ga0496119_0000701 3300048922 Bacteria 44880
185 Ga0496119_0013292 3300048922 Bacteria 6576
186 Ga0496120_0004587 3300048923 Bacteria 11503
187 Ga0496120_0011776 3300048923 Bacteria 5988
188 Ga0496120_0077431 3300048923 Bacteria 1810
189 Ga0496121_0000023 3300048924 Bacteria 463448
190 Ga0496121_0003644 3300048924 Bacteria 21668
191 Ga0496122_0000164 3300048925 Bacteria 158055
192 Ga0496124_0000014 3300048927 Bacteria 463448
193 Ga0496124_0028999 3300048927 Bacteria 4939
194 Ga0496125_0000020 3300048928 Bacteria 463448
195 Ga0496125_0030638 3300048928 Bacteria 4808
196 Ga0496126_0000023 3300048929 Bacteria 463448
197 Ga0496126_0000465 3300048929 Bacteria 80501
198 Ga0496126_0000521 3300048929 Bacteria 74946
199 Ga0501034_0007727 3300049571 Bacteria 11434
200 Ga0501036_0008932 3300049572 Bacteria 8238
201 Ga0501037_0002740 3300049573 Bacteria 12741
202 Ga0501038_0029567 3300049574 Bacteria 4853
203 Ga0501038_0045034 3300049574 Bacteria 3831
204 Ga0501039_0322019 3300049575 Bacteria 1215
205 Ga0501042_0136559 3300049578 Bacteria 1768
206 Ga0501047_0061755 3300049581 Bacteria 3615
207 Ga0501048_0140398 3300049582 Bacteria 1708
208 Ga0501074_0013957 3300049590 Bacteria 5838
209 nmdc:mga0yw44_13575_c1 3300050492 Bacteria 4293
210 nmdc:mga07m45_82724_c1 3300050496 Bacteria 1833
211 nmdc:mga0sz30_10164_c1 3300050516 Bacteria 3599
212 Ga0500643_024846 3300053087 Bacteria 1896
213 Ga0500641_0064286 3300053096 Bacteria 1533
214 Ga0466962_0001547 3300061719 Bacteria 10746
215 2548697926 2547132424 Bacteria 8348532
216 2552109593 2551306166 Bacteria 9731570
217 2559429549 2558860280 Bacteria 11429938
218 2566993114 2565956761 Bacteria 6601618
219 2583150360 2582580736 Bacteria 5325865
220 2644513074 2643221692 Bacteria 7282860
221 2738667499 2738541264 Bacteria 5935393
222 2738706038 2738541274 Bacteria 6909446
223 2738889923 2738541308 Bacteria 7020677
224 2739146569 2738541356 Bacteria 5935017
225 2739203229 2738543005 Bacteria 5278128
226 2739239699 2738543011 Bacteria 5731169
227 2739333062 2738543028 Bacteria 6917070
228 2739362234 2738543034 Bacteria 6084756
229 2744954003 2744054611 Bacteria 5611514
230 2753070684 2751185734 Bacteria 8863695
231 2776374235 2775506925 Bacteria 7237746
232 2791910604 2791354901 Bacteria 8322202
233 2816504758 2816332139 Bacteria 9138787
234 2863070981 2863067949 Bacteria 8541735
235 2866552726 2866552031 Bacteria 5824618
236 2866616718 2866612099 Bacteria 7543886
237 2870726757 2870721527 Bacteria 9689237
238 2889300924 2889300758 Bacteria 5690814
239 2891327429 2891326441 Bacteria 6439512
240 2899375250 2899370129 Bacteria 6781179
241 2904538892 2904535858 Bacteria 6308016
242 2904770144 2904765812 Bacteria 5369154
243 2904771007 2904770941 Bacteria 5580202
244 2908815050 2908811453 Bacteria 5478616
245 2915773160 2915768154 Bacteria 8424322
246 2917743383 2917736166 Bacteria 9690793
247 2919424466 2919420072 Bacteria 5390363
248 2919436859 2919432681 Bacteria 5390474
249 2919715898 2919713450 Bacteria 7431245
250 2922556810 2922554459 Bacteria 6683962
251 2928142547 2928142448 Bacteria 5288925
252 2939744438 2939743619 Bacteria 5762299
253 2956939386 2956939328 Bacteria 3474458
254 2974317192 2974315732 Bacteria 4602776
255 2984525398 2984523437 Bacteria 4508481
256 3001122179 3001119090 Bacteria 3449530
257 8003316298 8003314358 Bacteria 10575343
258 8047715561 8047710418 Bacteria 11023148
259 8056211935 8056207758 Bacteria 8639239
260 Ga0207668_10274124
261 JGI25406J46586_10000620
262 Ga0055540_1000057
263 Ga0070658_10000833
264 Ga0068869_100246321
265 Ga0070666_10018120
266 Ga0068868_100010836
267 Ga0070660_100030119
268 Ga0070692_10008789
269 Ga0070668_100056613
270 Ga0070669_100080807
271 Ga0070659_100064428
272 Ga0070667_100014387
273 Ga0070714_100037008
274 Ga0070710_10000170
275 Ga0070694_100014628
276 Ga0070663_100005770
277 Ga0070662_100001436
278 Ga0070686_100053070
279 Ga0070665_100123477
280 Ga0070704_100008718
281 Ga0068855_100010280
282 Ga0068855_100207155
283 Ga0068854_100006379
284 Ga0068856_100305017
285 Ga0070702_100008818
286 Ga0068864_100058536
287 Ga0068861_100003837
288 Ga0068863_100005297
289 Ga0068858_100227902
290 Ga0081539_10001153
291 Ga0070717_10026077
292 Ga0075365_10032255
293 Ga0075364_10166755
294 Ga0075369_10003018
295 Ga0068871_100099806
296 Ga0075435_100028027
297 Ga0105245_10004200
298 Ga0105247_10012543
299 Ga0105247_10189395
300 Ga0105241_10006666
301 Ga0105237_10043199
302 Ga0105238_10059544
303 Ga0105249_10002004
304 Ga0105246_10128846
305 Ga0157371_10018315
306 Ga0157370_10014338
307 Ga0157369_10082282
308 Ga0157374_10006922
309 Ga0163162_10036762
310 Ga0157379_10008934
311 Ga0157376_10014113
312 Ga0163161_10008040
313 Ga0213873_10000052
314 Ga0213876_10026509
315 Ga0213875_10001713
316 Ga0213875_10018551
317 Ga0209051_1000075
318 Ga0209051_1025186
319 Ga0207656_10023582
320 Ga0207692_10000293
321 Ga0207642_10031160
322 Ga0207710_10047837
323 Ga0207688_10001019
324 Ga0207680_10169223
325 Ga0207705_10000006
326 Ga0207693_10000510
327 Ga0207657_10003758
328 Ga0207681_10075287
329 Ga0207687_10028821
330 Ga0207664_10019929
331 Ga0207690_10042039
332 Ga0207706_10003673
333 Ga0207665_10005316
334 Ga0207711_10128778
335 Ga0207667_10043167
336 Ga0207651_10023029
337 Ga0207712_10009542
338 Ga0207668_10038781
339 Ga0207668_10069942
340 Ga0207677_10081576
341 Ga0207703_10035387
342 Ga0207639_10019546
343 Ga0207678_10000077
344 Ga0207641_10005178
345 Ga0207641_10136949
346 Ga0207674_10284150
347 Ga0207675_100006001
348 Ga0268266_10073414
349 Ga0307515_10104957
350 Ga0307511_10091152
351 Ga0314311_1047800
352 Ga0316180_1009522
353 Ga0265327_10002239
354 Ga0307513_10041796
355 Ga0307413_10034940
356 Ga0307410_10190609
357 Ga0307409_100212211
358 Ga0307411_10009511
359 Ga0307507_10011582
360 Ga0307507_10073192
361 Ga0373932_0014360
362 Ga0373956_0013567
363 Ga0436364_0473109
364 Ga0436364_1485205
365 Ga0436365_1625999
366 Ga0436362_0345588
367 Ga0451791_0105917
368 Ga0451800_0022302
369 Ga0451833_0085159
370 Ga0451853_1716496
371 Ga0451853_3032763
372 Ga0466969_0015116
373 Ga0466972_0002149
374 Ga0466965_0000195
375 Ga0466965_0117341
376 Ga0466966_0013518
377 Ga0466966_0013771
378 Ga0466966_0107399
379 Ga0466966_0291282
380 Ga0466961_0038196
381 Ga0466961_0146475
382 Ga0466961_0218643
383 Ga0466963_0000150
384 Ga0466963_0032598
385 Ga0466963_0063445
386 Ga0453684_0006841
387 Ga0466971_0015419
388 Ga0466971_0020160
389 Ga0466971_0046300
390 Ga0466968_0031533
391 Ga0466968_0039325
392 Ga0466970_0093628
393 Ga0466957_0000576
394 Ga0466960_0126540
395 Ga0466959_0000245
396 Ga0466959_0002480
397 Ga0466959_0192820
398 Ga0466958_0000070
399 Ga0466958_0201538
400 Ga0466967_0003549
401 Ga0466967_0029001
402 Ga0466967_0060057
403 Ga0466967_0124333
404 Ga0495638_0006195
405 Ga0495607_0034094
406 Ga0495668_0000573
407 Ga0495672_0011168
408 Ga0495683_0006418
409 Ga0496100_0000009
410 Ga0496100_0005904
411 Ga0496100_0083543
412 Ga0496101_0000018
413 Ga0496101_0004524
414 Ga0496101_0125989
415 Ga0496102_0000902
416 Ga0496102_0004997
417 Ga0496103_0000473
418 Ga0496103_0000606
419 Ga0496105_0020229
420 Ga0496106_0005623
421 Ga0496107_0001464
422 Ga0496107_0106496
423 Ga0496108_0002519
424 Ga0496108_0078946
425 Ga0496109_0050467
426 Ga0496109_0089899
427 Ga0496110_0003391
428 Ga0496110_0008263
429 Ga0496111_0031077
430 Ga0496111_0032779
431 Ga0496112_0038789
432 Ga0496114_0000136
433 Ga0496114_0089122
434 Ga0496114_0131664
435 Ga0496115_0041137
436 Ga0496116_0001191
437 Ga0496116_0007358
438 Ga0496117_0000242
439 Ga0496117_0008840
440 Ga0496118_0000412
441 Ga0496118_0007965
442 Ga0496119_0000061
443 Ga0496119_0000701
444 Ga0496119_0013292
445 Ga0496120_0004587
446 Ga0496120_0011776
447 Ga0496120_0077431
448 Ga0496121_0000023
449 Ga0496121_0003644
450 Ga0496122_0000164
451 Ga0496124_0000014
452 Ga0496124_0028999
453 Ga0496125_0000020
454 Ga0496125_0030638
455 Ga0496126_0000023
456 Ga0496126_0000465
457 Ga0496126_0000521
458 Ga0501034_0007727
459 Ga0501036_0008932
460 Ga0501037_0002740
461 Ga0501038_0029567
462 Ga0501038_0045034
463 Ga0501039_0322019
464 Ga0501042_0136559
465 Ga0501047_0061755
466 Ga0501048_0140398
467 Ga0501074_0013957
468 nmdc:mga0yw44_13575_c1
469 nmdc:mga07m45_82724_c1
470 nmdc:mga0sz30_10164_c1
471 Ga0500643_024846
472 Ga0500641_0064286
473 Ga0466962_0001547
474 2548697926
475 2552109593
476 2559429549
477 2566993114
478 2583150360
479 2644513074
480 2738667499
481 2738706038
482 2738889923
483 2739146569
484 2739203229
485 2739239699
486 2739333062
487 2739362234
488 2744954003
489 2753070684
490 2776374235
491 2791910604
492 2816504758
493 2863070981
494 2866552726
495 2866616718
496 2870726757
497 2889300924
498 2891327429
499 2899375250
500 2904538892
501 2904770144
502 2904771007
503 2908815050
504 2915773160
505 2917743383
506 2919424466
507 2919436859
508 2919715898
509 2922556810
510 2928142547
511 2939744438
512 2956939386
513 2974317192
514 2984525398
515 3001122179
516 8003316298
517 8047715561
518 8056211935

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01820

Dala_Dala_lig_N

D-ala D-ala ligase N-terminus

63

190

0.97

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

207

411

0.97

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

200

403

0.76

PF02222

ATP-grasp

ATP-grasp domain

208

384

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3se7-assembly3.cif.gz_F ancient vana 0.9319 5 357
3se7-assembly3.cif.gz_F ancient vana 0.9264 5 357
3lwb-assembly1.cif.gz_B crystal structure of apo d-alanine:d-alanine ligase (ddl) from mycobacterium tuberculosis 0.9213 6 364
3i12-assembly1.cif.gz_B the crystal structure of the d-alanyl-alanine synthetase a from salmonella enterica subsp. enterica serovar typhimurium str. lt2 0.9187 4 359
3lwb-assembly1.cif.gz_B crystal structure of apo d-alanine:d-alanine ligase (ddl) from mycobacterium tuberculosis 0.9184 6 364
ID Description Score Start End Superfamily
3lwbB03 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9866 161 226 3.30.1490.20
af_P9WP31_140_368_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9734 134 359 3.40.50.20
3lwbB03 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.972 161 226 3.30.1490.20
af_P9WP31_11_139_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9642 7 132 3.40.50.20
af_P9WP31_140_368_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9567 134 359 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A4Y3WQH7-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9886 10 364 GO:0005524
GO:0005829
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555
AF-A0A4Y3WQH7-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9804 10 364 GO:0005524
GO:0005829
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555
AF-A0A5A7Z9K0-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9777 4 364 GO:0005524
GO:0005829
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555
AF-A0A7K1JPY8-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9775 3 364 GO:0005524
GO:0005829
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555
AF-A0A1X1RIK4-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9773 7 364 GO:0005524
GO:0005829
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555

Map