F368523

General Info

Members Datasets Scaffolds Average Seq Length
259 177 518 223

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10031493|rootL2_100314933
Length 218
Sequence MAITKPGVVNEERRGRGRPQARPDEETRIVIVEAAREEFATSGYAATSMESVARRAGVSTKTLYRLIPNKAALFEANITDSLDRLVSRITLRKCDGDIEAAVREALIACGELILDGTVIGILRMVIGEGEKFPELTDTFYNKAIKRTESTLANWLKAHAERGMIEIDDATEAAGILLGMLAFQPQRAVMLGHRPAPSRKELERRAGVVAKLFLKGCAR

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
49 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
102 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
103 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
104 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
108 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
113 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
114 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300036458 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
118 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
121 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
124 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
125 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
126 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
127 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
128 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
129 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
167 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
168 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
169 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
170 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
171 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
172 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
173 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
174 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
175 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
176 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
177 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.3
Metatranscriptomes 0.77
Isolates 1.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.18
Nodule 2.7
Rhizoplane 13.9
Rhizosphere 70.27
Stem 0
Stem Tuber 0
Unclassified 0.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10031493 3300003322 Bacteria 2251
2 JGI25406J46586_10001773 3300003203 Bacteria 10162
3 JGI25404J52841_10001426 3300003659 Bacteria 4199
4 Ga0032354_1085123 3300003693 Bacteria 884
5 Ga0070658_10041777 3300005327 Bacteria 3700
6 Ga0070676_10381373 3300005328 Bacteria 976
7 Ga0070683_100370443 3300005329 Bacteria 1364
8 Ga0068868_100052129 3300005338 Bacteria 3221
9 Ga0070660_100436621 3300005339 Bacteria 1085
10 Ga0070668_100361694 3300005347 Bacteria 1231
11 Ga0070667_100591059 3300005367 Unclassified 1022
12 Ga0070709_10000815 3300005434 Bacteria 17382
13 Ga0070714_100004948 3300005435 Bacteria 10126
14 Ga0070713_100014718 3300005436 Bacteria 5820
15 Ga0070710_10001614 3300005437 Bacteria 10639
16 Ga0070710_10020126 3300005437 Bacteria 3458
17 Ga0070711_100015941 3300005439 Bacteria 4762
18 Ga0070711_100090634 3300005439 Bacteria 2202
19 Ga0070711_100670468 3300005439 Bacteria 871
20 Ga0070700_100224476 3300005441 Bacteria 1333
21 Ga0070663_100005881 3300005455 Bacteria 7335
22 Ga0070663_100042997 3300005455 Bacteria 3177
23 Ga0070663_100340852 3300005455 Bacteria 1211
24 Ga0070678_100224510 3300005456 Bacteria 1563
25 Ga0070662_100315322 3300005457 Bacteria 1274
26 Ga0070681_10017652 3300005458 Bacteria 7131
27 Ga0070707_100044780 3300005468 Bacteria 4236
28 Ga0070698_100252822 3300005471 Bacteria 1695
29 Ga0070699_100790876 3300005518 Bacteria 868
30 Ga0070679_100097593 3300005530 Bacteria 2926
31 Ga0070679_100119817 3300005530 Bacteria 2616
32 Ga0070684_100041235 3300005535 Bacteria 3979
33 Ga0070684_100442690 3300005535 Bacteria 1200
34 Ga0070697_100070059 3300005536 Bacteria 2874
35 Ga0068853_100058498 3300005539 Bacteria 3328
36 Ga0070672_100174696 3300005543 Bacteria 1788
37 Ga0068855_100042310 3300005563 Bacteria 5398
38 Ga0070664_100022876 3300005564 Bacteria 5156
39 Ga0068856_100228088 3300005614 Bacteria 1878
40 Ga0068852_100427264 3300005616 Bacteria 1308
41 Ga0068864_100056073 3300005618 Bacteria 3405
42 Ga0068864_100229834 3300005618 Bacteria 1715
43 Ga0068866_10314894 3300005718 Bacteria 982
44 Ga0068870_10355708 3300005840 Bacteria 941
45 Ga0068860_100225972 3300005843 Bacteria 1818
46 Ga0068860_101043198 3300005843 Bacteria 836
47 Ga0081455_10001374 3300005937 Bacteria 30050
48 Ga0081455_10020112 3300005937 Bacteria 6298
49 Ga0081455_10062902 3300005937 Bacteria 3117
50 Ga0081455_10085073 3300005937 Bacteria 2579
51 Ga0081455_10103923 3300005937 Bacteria 2274
52 Ga0081455_10163002 3300005937 Bacteria 1707
53 Ga0081540_1002607 3300005983 Bacteria 14656
54 Ga0081540_1004995 3300005983 Bacteria 9968
55 Ga0081540_1018256 3300005983 Bacteria 4311
56 Ga0081540_1038636 3300005983 Bacteria 2514
57 Ga0081539_10000617 3300005985 Bacteria 72003
58 Ga0070717_10001133 3300006028 Bacteria 18022
59 Ga0070717_10030783 3300006028 Bacteria 4313
60 Ga0075365_10239691 3300006038 Bacteria 1274
61 Ga0070715_10004082 3300006163 Bacteria 4744
62 Ga0070716_100001910 3300006173 Bacteria 9469
63 Ga0070712_100028075 3300006175 Bacteria 3761
64 Ga0070712_100128847 3300006175 Bacteria 1915
65 Ga0070712_100222204 3300006175 Bacteria 1496
66 Ga0097621_100113890 3300006237 Bacteria 2287
67 Ga0075433_10996922 3300006852 Bacteria 730
68 Ga0099824_1031083 3300006942 Bacteria 2067
69 Ga0099823_1002262 3300006944 Bacteria 17204
70 Ga0075435_100310250 3300007076 Bacteria 1350
71 Ga0099795_10096078 3300007788 Bacteria 1156
72 Ga0105240_10057761 3300009093 Bacteria 4845
73 Ga0105245_10028960 3300009098 Bacteria 4890
74 Ga0105243_10602571 3300009148 Bacteria 1058
75 Ga0105241_10416878 3300009174 Bacteria 1181
76 Ga0105242_10235503 3300009176 Bacteria 1643
77 Ga0105248_10417408 3300009177 Bacteria 1511
78 Ga0105248_10452798 3300009177 Bacteria 1446
79 Ga0105238_10140244 3300009551 Bacteria 2394
80 Ga0105238_10480893 3300009551 Bacteria 1241
81 Ga0105238_10632124 3300009551 Bacteria 1080
82 Ga0099796_10015074 3300010159 Bacteria 2250
83 Ga0105239_10086754 3300010375 Bacteria 3450
84 Ga0105239_10487594 3300010375 Bacteria 1401
85 Ga0105246_10004265 3300011119 Bacteria 8699
86 Ga0157370_10159654 3300013104 Bacteria 2098
87 Ga0157370_10316693 3300013104 Bacteria 1439
88 Ga0157374_10006560 3300013296 Bacteria 9880
89 Ga0163162_10053069 3300013306 Bacteria 4073
90 Ga0163162_10222900 3300013306 Bacteria 2015
91 Ga0163162_11087677 3300013306 Bacteria 906
92 Ga0157375_10013756 3300013308 Bacteria 7214
93 Ga0163163_10010730 3300014325 Bacteria 8263
94 Ga0163163_10037680 3300014325 Bacteria 4705
95 Ga0163163_10134844 3300014325 Bacteria 2510
96 Ga0157379_10034683 3300014968 Bacteria 4500
97 Ga0157376_10021650 3300014969 Bacteria 4996
98 Ga0157376_10303946 3300014969 Bacteria 1511
99 Ga0163161_10214316 3300017792 Bacteria 1489
100 Ga0213873_10015881 3300021358 Bacteria 1695
101 Ga0209758_1004253 3300025297 Bacteria 12111
102 Ga0207692_10063611 3300025898 Bacteria 1918
103 Ga0207692_10114709 3300025898 Bacteria 1499
104 Ga0207685_10024271 3300025905 Bacteria 2077
105 Ga0207699_10060117 3300025906 Bacteria 2280
106 Ga0207705_10311882 3300025909 Bacteria 1208
107 Ga0207684_10243022 3300025910 Bacteria 1553
108 Ga0207707_10267272 3300025912 Bacteria 1483
109 Ga0207695_10170948 3300025913 Bacteria 2099
110 Ga0207695_10403225 3300025913 Bacteria 1252
111 Ga0207693_10000564 3300025915 Bacteria 33530
112 Ga0207693_10034331 3300025915 Bacteria 4001
113 Ga0207693_10226011 3300025915 Bacteria 1470
114 Ga0207663_10047512 3300025916 Bacteria 2650
115 Ga0207663_10090236 3300025916 Bacteria 2032
116 Ga0207663_10360527 3300025916 Bacteria 1103
117 Ga0207649_10188089 3300025920 Bacteria 1450
118 Ga0207652_10055476 3300025921 Bacteria 3408
119 Ga0207652_10111069 3300025921 Bacteria 2431
120 Ga0207646_10055311 3300025922 Bacteria 3548
121 Ga0207687_10064273 3300025927 Bacteria 2601
122 Ga0207700_10081967 3300025928 Bacteria 2521
123 Ga0207664_10186544 3300025929 Bacteria 1783
124 Ga0207704_10047690 3300025938 Bacteria 2563
125 Ga0207665_10002339 3300025939 Bacteria 12808
126 Ga0207691_10136127 3300025940 Bacteria 2166
127 Ga0207711_10496825 3300025941 Bacteria 1137
128 Ga0207661_10042131 3300025944 Bacteria 3598
129 Ga0207661_10182955 3300025944 Bacteria 1832
130 Ga0207679_10277814 3300025945 Bacteria 1435
131 Ga0207679_10507597 3300025945 Bacteria 1077
132 Ga0207679_10925054 3300025945 Bacteria 798
133 Ga0207667_10358893 3300025949 Bacteria 1486
134 Ga0207651_10146971 3300025960 Bacteria 1830
135 Ga0207668_10224356 3300025972 Bacteria 1511
136 Ga0207639_10032575 3300026041 Bacteria 3838
137 Ga0207678_10003578 3300026067 Bacteria 13971
138 Ga0207678_10006198 3300026067 Bacteria 10623
139 Ga0207678_10022012 3300026067 Bacteria 5587
140 Ga0207678_10047609 3300026067 Bacteria 3707
141 Ga0207676_10481610 3300026095 Bacteria 1175
142 Ga0207683_10106294 3300026121 Bacteria 2510
143 Ga0207683_10182730 3300026121 Bacteria 1902
144 Ga0207698_10552897 3300026142 Bacteria 1128
145 Ga0209389_1000111 3300027296 Bacteria 72517
146 Ga0209489_100220 3300027361 Bacteria 95167
147 Ga0209700_100041 3300027363 Bacteria 168380
148 Ga0209179_1020943 3300027512 Bacteria 1273
149 Ga0268266_10002294 3300028379 Bacteria 20753
150 Ga0268264_10195407 3300028381 Bacteria 1847
151 Ga0265339_10012620 3300031249 Bacteria 5148
152 Ga0307508_10464499 3300031616 Bacteria 859
153 Ga0265314_10022701 3300031711 Bacteria 4803
154 Ga0265342_10025182 3300031712 Bacteria 3745
155 Ga0307416_101126083 3300032002 Bacteria 890
156 Ga0373941_0154081 3300035115 Bacteria 845
157 Ga0373943_0197824 3300035170 Bacteria 1111
158 Ga0373935_0190337 3300035692 Bacteria 1413
159 Ga0373927_0006891 3300035695 Bacteria 7722
160 Ga0373927_0011126 3300035695 Bacteria 5993
161 Ga0373947_0072633 3300035725 Bacteria 2113
162 Ga0310112_025312 3300036458 Bacteria 822
163 Ga0436360_0363565 3300039438 Bacteria 2942
164 Ga0436360_0847307 3300039438 Bacteria 1496
165 Ga0436361_0666325 3300039447 Bacteria 3654
166 Ga0436363_0832107 3300039450 Bacteria 1171
167 Ga0436362_0137292 3300039453 Bacteria 2134
168 Ga0466966_0145699 3300044684 Bacteria 1446
169 Ga0495603_0004255 3300046455 Bacteria 8526
170 Ga0495603_0193781 3300046455 Bacteria 1175
171 Ga0495651_0026977 3300046462 Bacteria 4472
172 Ga0495580_0089894 3300046472 Bacteria 2138
173 Ga0495580_0215666 3300046472 Bacteria 1320
174 Ga0495639_0062694 3300046475 Bacteria 1706
175 Ga0495639_0140239 3300046475 Bacteria 1162
176 Ga0495594_0026339 3300046499 Bacteria 3128
177 Ga0495606_0086448 3300046507 Bacteria 1938
178 Ga0495648_0036996 3300046524 Bacteria 3141
179 Ga0495633_0168861 3300046558 Bacteria 1008
180 Ga0495656_0078202 3300046615 Bacteria 1486
181 Ga0495656_0132296 3300046615 Bacteria 1188
182 Ga0495668_0049846 3300046616 Bacteria 2322
183 Ga0495588_0173909 3300046674 Bacteria 1138
184 Ga0495623_0201478 3300046679 Bacteria 1144
185 Ga0495658_0155628 3300046683 Bacteria 1407
186 Ga0495658_0545614 3300046683 Bacteria 742
187 Ga0495581_0132739 3300047315 Bacteria 1451
188 Ga0495581_0211987 3300047315 Bacteria 1133
189 Ga0495581_0219726 3300047315 Bacteria 1111
190 Ga0495686_0429019 3300047472 Bacteria 705
191 Ga0495602_0093816 3300048088 Bacteria 2482
192 Ga0496100_0011081 3300048903 Bacteria 5118
193 Ga0496100_0103783 3300048903 Bacteria 1963
194 Ga0496101_0066529 3300048904 Bacteria 2629
195 Ga0496101_0391662 3300048904 Bacteria 1094
196 Ga0496102_0001311 3300048905 Bacteria 22329
197 Ga0496102_0159947 3300048905 Bacteria 2118
198 Ga0496102_0164624 3300048905 Bacteria 2087
199 Ga0496103_0038920 3300048906 Bacteria 2920
200 Ga0496104_0023614 3300048907 Bacteria 5654
201 Ga0496104_0285470 3300048907 Bacteria 1563
202 Ga0496105_0025120 3300048908 Bacteria 4846
203 Ga0496105_0593792 3300048908 Bacteria 860
204 Ga0496106_0009293 3300048909 Bacteria 7264
205 Ga0496106_0075765 3300048909 Bacteria 2577
206 Ga0496106_0099411 3300048909 Bacteria 2255
207 Ga0496107_0010055 3300048910 Bacteria 6563
208 Ga0496108_0049713 3300048911 Bacteria 3507
209 Ga0496109_0015687 3300048912 Bacteria 6609
210 Ga0496110_0534160 3300048913 Bacteria 1066
211 Ga0496111_0214619 3300048914 Bacteria 1429
212 Ga0496112_0024404 3300048915 Bacteria 5789
213 Ga0496112_0335585 3300048915 Bacteria 1455
214 Ga0496112_0391506 3300048915 Bacteria 1330
215 Ga0496113_0032124 3300048916 Bacteria 3813
216 Ga0496113_0090956 3300048916 Bacteria 2352
217 Ga0496113_0181576 3300048916 Bacteria 1668
218 Ga0496113_0638138 3300048916 Bacteria 852
219 Ga0496114_0033646 3300048917 Bacteria 4225
220 Ga0496114_0054404 3300048917 Bacteria 3337
221 Ga0496114_0204035 3300048917 Bacteria 1732
222 Ga0496115_0001845 3300048918 Bacteria 15156
223 Ga0496115_0032942 3300048918 Bacteria 4090
224 Ga0496115_0119474 3300048918 Bacteria 2168
225 Ga0496115_0121455 3300048918 Bacteria 2150
226 Ga0496115_0158586 3300048918 Bacteria 1869
227 Ga0496115_0225928 3300048918 Bacteria 1544
228 Ga0496117_0190629 3300048920 Bacteria 1168
229 Ga0496118_0016266 3300048921 Bacteria 6833
230 Ga0496119_0022177 3300048922 Bacteria 4558
231 Ga0496121_0000283 3300048924 Bacteria 105735
232 Ga0496121_0012952 3300048924 Bacteria 9016
233 Ga0496121_0267425 3300048924 Bacteria 1177
234 Ga0496125_0150228 3300048928 Bacteria 1601
235 Ga0496126_0005967 3300048929 Bacteria 13696
236 Ga0496126_0139835 3300048929 Bacteria 2085
237 Ga0496126_0350527 3300048929 Bacteria 1207
238 Ga0496126_0680862 3300048929 Bacteria 801
239 nmdc:mga03n38_273_c1 3300050490 Bacteria 12264
240 nmdc:mga0yw44_6212_c2 3300050492 Bacteria 1661
241 nmdc:mga0n895_42454_c1 3300050512 Bacteria 4424
242 Ga0495655_0025543 3300053083 Bacteria 1383
243 Ga0500651_0000718 3300053093 Bacteria 16295
244 Ga0500651_0138148 3300053093 Bacteria 1471
245 Ga0500566_0002119 3300053094 Bacteria 11686
246 Ga0500595_000476 3300053119 Bacteria 24760
247 Ga0500595_001747 3300053119 Bacteria 11327
248 Ga0500595_008938 3300053119 Bacteria 4069
249 Ga0500595_076671 3300053119 Bacteria 984
250 Ga0500642_0032173 3300053130 Bacteria 2199
251 Ga0500603_002951 3300053150 Bacteria 3683
252 Ga0500638_011095 3300053162 Bacteria 3981
253 Ga0500637_0000172 3300053178 Bacteria 24102
254 Ga0500661_001340 3300055283 Bacteria 4594
255 2513892602 2513237141 Bacteria 8496279
256 2889039564 2889033259 Bacteria 9099371
257 2935923664 2935916978 Bacteria 9113783
258 3005484741 3005483717 Bacteria 7877331
259 8006991574 8006984368 Bacteria 9651211
260 rootL2_10031493
261 JGI25406J46586_10001773
262 JGI25404J52841_10001426
263 Ga0032354_1085123
264 Ga0070658_10041777
265 Ga0070676_10381373
266 Ga0070683_100370443
267 Ga0068868_100052129
268 Ga0070660_100436621
269 Ga0070668_100361694
270 Ga0070667_100591059
271 Ga0070709_10000815
272 Ga0070714_100004948
273 Ga0070713_100014718
274 Ga0070710_10001614
275 Ga0070710_10020126
276 Ga0070711_100015941
277 Ga0070711_100090634
278 Ga0070711_100670468
279 Ga0070700_100224476
280 Ga0070663_100005881
281 Ga0070663_100042997
282 Ga0070663_100340852
283 Ga0070678_100224510
284 Ga0070662_100315322
285 Ga0070681_10017652
286 Ga0070707_100044780
287 Ga0070698_100252822
288 Ga0070699_100790876
289 Ga0070679_100097593
290 Ga0070679_100119817
291 Ga0070684_100041235
292 Ga0070684_100442690
293 Ga0070697_100070059
294 Ga0068853_100058498
295 Ga0070672_100174696
296 Ga0068855_100042310
297 Ga0070664_100022876
298 Ga0068856_100228088
299 Ga0068852_100427264
300 Ga0068864_100056073
301 Ga0068864_100229834
302 Ga0068866_10314894
303 Ga0068870_10355708
304 Ga0068860_100225972
305 Ga0068860_101043198
306 Ga0081455_10001374
307 Ga0081455_10020112
308 Ga0081455_10062902
309 Ga0081455_10085073
310 Ga0081455_10103923
311 Ga0081455_10163002
312 Ga0081540_1002607
313 Ga0081540_1004995
314 Ga0081540_1018256
315 Ga0081540_1038636
316 Ga0081539_10000617
317 Ga0070717_10001133
318 Ga0070717_10030783
319 Ga0075365_10239691
320 Ga0070715_10004082
321 Ga0070716_100001910
322 Ga0070712_100028075
323 Ga0070712_100128847
324 Ga0070712_100222204
325 Ga0097621_100113890
326 Ga0075433_10996922
327 Ga0099824_1031083
328 Ga0099823_1002262
329 Ga0075435_100310250
330 Ga0099795_10096078
331 Ga0105240_10057761
332 Ga0105245_10028960
333 Ga0105243_10602571
334 Ga0105241_10416878
335 Ga0105242_10235503
336 Ga0105248_10417408
337 Ga0105248_10452798
338 Ga0105238_10140244
339 Ga0105238_10480893
340 Ga0105238_10632124
341 Ga0099796_10015074
342 Ga0105239_10086754
343 Ga0105239_10487594
344 Ga0105246_10004265
345 Ga0157370_10159654
346 Ga0157370_10316693
347 Ga0157374_10006560
348 Ga0163162_10053069
349 Ga0163162_10222900
350 Ga0163162_11087677
351 Ga0157375_10013756
352 Ga0163163_10010730
353 Ga0163163_10037680
354 Ga0163163_10134844
355 Ga0157379_10034683
356 Ga0157376_10021650
357 Ga0157376_10303946
358 Ga0163161_10214316
359 Ga0213873_10015881
360 Ga0209758_1004253
361 Ga0207692_10063611
362 Ga0207692_10114709
363 Ga0207685_10024271
364 Ga0207699_10060117
365 Ga0207705_10311882
366 Ga0207684_10243022
367 Ga0207707_10267272
368 Ga0207695_10170948
369 Ga0207695_10403225
370 Ga0207693_10000564
371 Ga0207693_10034331
372 Ga0207693_10226011
373 Ga0207663_10047512
374 Ga0207663_10090236
375 Ga0207663_10360527
376 Ga0207649_10188089
377 Ga0207652_10055476
378 Ga0207652_10111069
379 Ga0207646_10055311
380 Ga0207687_10064273
381 Ga0207700_10081967
382 Ga0207664_10186544
383 Ga0207704_10047690
384 Ga0207665_10002339
385 Ga0207691_10136127
386 Ga0207711_10496825
387 Ga0207661_10042131
388 Ga0207661_10182955
389 Ga0207679_10277814
390 Ga0207679_10507597
391 Ga0207679_10925054
392 Ga0207667_10358893
393 Ga0207651_10146971
394 Ga0207668_10224356
395 Ga0207639_10032575
396 Ga0207678_10003578
397 Ga0207678_10006198
398 Ga0207678_10022012
399 Ga0207678_10047609
400 Ga0207676_10481610
401 Ga0207683_10106294
402 Ga0207683_10182730
403 Ga0207698_10552897
404 Ga0209389_1000111
405 Ga0209489_100220
406 Ga0209700_100041
407 Ga0209179_1020943
408 Ga0268266_10002294
409 Ga0268264_10195407
410 Ga0265339_10012620
411 Ga0307508_10464499
412 Ga0265314_10022701
413 Ga0265342_10025182
414 Ga0307416_101126083
415 Ga0373941_0154081
416 Ga0373943_0197824
417 Ga0373935_0190337
418 Ga0373927_0006891
419 Ga0373927_0011126
420 Ga0373947_0072633
421 Ga0310112_025312
422 Ga0436360_0363565
423 Ga0436360_0847307
424 Ga0436361_0666325
425 Ga0436363_0832107
426 Ga0436362_0137292
427 Ga0466966_0145699
428 Ga0495603_0004255
429 Ga0495603_0193781
430 Ga0495651_0026977
431 Ga0495580_0089894
432 Ga0495580_0215666
433 Ga0495639_0062694
434 Ga0495639_0140239
435 Ga0495594_0026339
436 Ga0495606_0086448
437 Ga0495648_0036996
438 Ga0495633_0168861
439 Ga0495656_0078202
440 Ga0495656_0132296
441 Ga0495668_0049846
442 Ga0495588_0173909
443 Ga0495623_0201478
444 Ga0495658_0155628
445 Ga0495658_0545614
446 Ga0495581_0132739
447 Ga0495581_0211987
448 Ga0495581_0219726
449 Ga0495686_0429019
450 Ga0495602_0093816
451 Ga0496100_0011081
452 Ga0496100_0103783
453 Ga0496101_0066529
454 Ga0496101_0391662
455 Ga0496102_0001311
456 Ga0496102_0159947
457 Ga0496102_0164624
458 Ga0496103_0038920
459 Ga0496104_0023614
460 Ga0496104_0285470
461 Ga0496105_0025120
462 Ga0496105_0593792
463 Ga0496106_0009293
464 Ga0496106_0075765
465 Ga0496106_0099411
466 Ga0496107_0010055
467 Ga0496108_0049713
468 Ga0496109_0015687
469 Ga0496110_0534160
470 Ga0496111_0214619
471 Ga0496112_0024404
472 Ga0496112_0335585
473 Ga0496112_0391506
474 Ga0496113_0032124
475 Ga0496113_0090956
476 Ga0496113_0181576
477 Ga0496113_0638138
478 Ga0496114_0033646
479 Ga0496114_0054404
480 Ga0496114_0204035
481 Ga0496115_0001845
482 Ga0496115_0032942
483 Ga0496115_0119474
484 Ga0496115_0121455
485 Ga0496115_0158586
486 Ga0496115_0225928
487 Ga0496117_0190629
488 Ga0496118_0016266
489 Ga0496119_0022177
490 Ga0496121_0000283
491 Ga0496121_0012952
492 Ga0496121_0267425
493 Ga0496125_0150228
494 Ga0496126_0005967
495 Ga0496126_0139835
496 Ga0496126_0350527
497 Ga0496126_0680862
498 nmdc:mga03n38_273_c1
499 nmdc:mga0yw44_6212_c2
500 nmdc:mga0n895_42454_c1
501 Ga0495655_0025543
502 Ga0500651_0000718
503 Ga0500651_0138148
504 Ga0500566_0002119
505 Ga0500595_000476
506 Ga0500595_001747
507 Ga0500595_008938
508 Ga0500595_076671
509 Ga0500642_0032173
510 Ga0500603_002951
511 Ga0500638_011095
512 Ga0500637_0000172
513 Ga0500661_001340
514 2513892602
515 2889039564
516 2935923664
517 3005484741
518 8006991574

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

31

76

0.98

PF14246

TetR_C_7

AefR-like transcriptional repressor, C-terminal domain

100

215

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cwr-assembly3.cif.gz_B crystal structure of transcriptional regulator of tetr family (yp_425770.1) from rhodospirillum rubrum atcc 11170 at 1.50 a resolution 0.8489 23 213
3cwr-assembly3.cif.gz_B crystal structure of transcriptional regulator of tetr family (yp_425770.1) from rhodospirillum rubrum atcc 11170 at 1.50 a resolution 0.8329 23 213
3cwr-assembly2.cif.gz_A crystal structure of transcriptional regulator of tetr family (yp_425770.1) from rhodospirillum rubrum atcc 11170 at 1.50 a resolution 0.8327 21 213
3bhq-assembly1.cif.gz_B crystal structure of a putative tetr-family transcriptional regulator (mlr_4833) from mesorhizobium loti maff303099 at 1.54 a resolution 0.8321 23 217
3cwr-assembly2.cif.gz_A crystal structure of transcriptional regulator of tetr family (yp_425770.1) from rhodospirillum rubrum atcc 11170 at 1.50 a resolution 0.8212 21 213
ID Description Score Start End Superfamily
3mvpB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9833 26 67 1.10.10.60
4xk4D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9821 28 77 1.10.10.60
4xk4B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9818 28 77 1.10.10.60
2of7A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9814 26 69 1.10.10.60
4jykB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9797 28 77 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A4Q8M7E7-F1-model_v4 TetR/AcrR family transcriptional regulator 0.889 20 217 GO:0000976
GO:0003700
AF-A0A7X2FV18-F1-model_v4 TetR family transcriptional regulator 0.8816 21 217 GO:0000976
GO:0003700
AF-F4F7M1-F1-model_v4 deleted 0.8813 75 217
AF-A0A349QJG0-F1-model_v4 deleted 0.8767 21 222
AF-A0A7R7CIU6-F1-model_v4 TetR family transcriptional regulator 0.8684 25 222 GO:0000976
GO:0003700

Map