F368483

General Info

Members Datasets Scaffolds Average Seq Length
258 205 516 732

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3002998708|3003002268
Length 811
Sequence RSSSSRKAHRTCPLCEALCGLELTLDEAGTVTGVRGDKQDPLSKGFICPKGATLGRLDGDPDRLTTPMLRRDATDAPAADGHEPAGQVPDDHAPGGHVPGGHVPGDHAPGGHVPGDHAPGDHAPGDHAPGDHAPGGHVSGDWDEAFQTVHRELAKVIERYGKDAVAVYIGNPTAHSVAGPLYGAAIIKAIGTRNVYTASTADQMPKHVSSGHLFGDPLAIPVPDLDRTDHLLMLGANPLESNGSLCSAPDFPGRLKAIGARGGKVTVVDPRRTRTADLADEHVFIRPGTDAYLLMALVHTLFAEDLVADLSGFAGLVRSLDDLRTLTADFAPERVAPVTGVPAATTRRMARELAAAERAAVYGRIGTCTQAYGTLNSWLVDVLNVLTGNLDRPGGAMFPRPAHAPVYRKKRPFTTGRWTSRVRGLPEVNGELPVATLADEIEAPGEGQIRALITIGGNPALSAPNATRLDKAFAGLEFMVSVDPYLNETTRHAHVILPPPRPAQTPHYDLALLGLAVRDYARYSPPIVPRPEGRPSEAEILAALAVIASGMAPPSAREAALGLDEMIITSTLKKATTVEGSPVFGREPDELRKTLDATMTSTEQRLDMMLRLGPYGDGFGADPEGLTLTRLRDEHPHGLDLGALKPRLDEVLCTASGQIELCPPSFAADVTRLRASLDAAPEGLVLIGRRHLRSNNSWLHNLPELVRGSNTCTLQLNPSDADRLGIAAGATVRVTSRTGTIEAVAEPTDTVMAGVVSLPHGWGHDRPGTRTRVAQGNPGVNVNAVTDEREIDPLSGNAVFNGVPVTLEPTP

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
26 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
27 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
28 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
29 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
41 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
42 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
43 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
46 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
47 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
57 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
58 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
59 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
60 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
61 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
62 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
65 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
66 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
67 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
68 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
79 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
80 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
81 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
82 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
83 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
84 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
85 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
88 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
97 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
100 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
107 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
108 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
109 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
110 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
111 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
112 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
113 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
136 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
148 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
149 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
154 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
155 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
156 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
157 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
158 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
159 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
160 2643221647 Streptomyces sp. Root369 Isolate Unclassified
161 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
162 2643221714 Streptomyces sp. Root264 Isolate Unclassified
163 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
164 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
165 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
166 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
167 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
168 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
169 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
170 2808606448 Streptomyces sp. 193411 Isolate Unclassified
171 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
172 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
173 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
174 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
175 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
176 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
177 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
178 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
179 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
180 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
181 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
182 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
183 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
184 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
185 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
186 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
187 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
188 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
189 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
190 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
191 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
192 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
193 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
194 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
195 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
196 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
197 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
198 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
199 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
200 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
201 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
202 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
203 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
204 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
205 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.07
Metatranscriptomes 0.39
Isolates 20.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.71
Nodule 0.78
Rhizoplane 0.39
Rhizosphere 79.84
Stem 0
Stem Tuber 0
Unclassified 0.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10031275 3300003320 Bacteria 4936
2 Ga0006562J51391_1049783 3300003578 Bacteria 5745
3 Ga0070683_100012791 3300005329 Bacteria 7301
4 Ga0068868_100006291 3300005338 Bacteria 8394
5 Ga0070675_100010242 3300005354 Bacteria 7314
6 Ga0070714_100000003 3300005435 Bacteria 329743
7 Ga0070714_100018017 3300005435 Bacteria 5728
8 Ga0070714_100086256 3300005435 Bacteria 2743
9 Ga0070700_100000083 3300005441 Bacteria 62947
10 Ga0070663_100007832 3300005455 Bacteria 6533
11 Ga0070662_100018791 3300005457 Bacteria 4681
12 Ga0070684_100002310 3300005535 Bacteria 14057
13 Ga0070664_100003319 3300005564 Bacteria 13004
14 Ga0068857_100045830 3300005577 Bacteria 3880
15 Ga0068862_100031269 3300005844 Bacteria 4492
16 Ga0081538_10007611 3300005981 Bacteria 9339
17 Ga0081539_10004047 3300005985 Bacteria 16801
18 Ga0070717_10038372 3300006028 Bacteria 3893
19 Ga0075364_10012136 3300006051 Bacteria 5260
20 Ga0075367_10007631 3300006178 Bacteria 5554
21 Ga0075430_100000650 3300006846 Bacteria 26507
22 Ga0075431_100000237 3300006847 Bacteria 41441
23 Ga0079104_1010422 3300006946 Unclassified 3064
24 Ga0111539_10014086 3300009094 Bacteria 9996
25 Ga0111539_10026829 3300009094 Bacteria 7037
26 Ga0105245_10000038 3300009098 Bacteria 144883
27 Ga0105237_10111337 3300009545 Bacteria 2730
28 Ga0105246_10017069 3300011119 Bacteria 4610
29 Ga0182008_10001517 3300014497 Bacteria 15502
30 Ga0182007_10001839 3300015262 Bacteria 11061
31 Ga0183367_1010 3300015688 Bacteria 416164
32 Ga0207650_10049853 3300025925 Bacteria 3093
33 Ga0207659_10007075 3300025926 Bacteria 6888
34 Ga0207687_10000183 3300025927 Bacteria 41634
35 Ga0207664_10000039 3300025929 Bacteria 164162
36 Ga0207706_10031645 3300025933 Bacteria 4712
37 Ga0207661_10007490 3300025944 Bacteria 7766
38 Ga0207678_10032807 3300026067 Bacteria 4525
39 Ga0207708_10000014 3300026075 Bacteria 203569
40 Ga0207708_10003198 3300026075 Bacteria 12066
41 Ga0207674_10065740 3300026116 Bacteria 3654
42 Ga0207428_10007153 3300027907 Bacteria 10211
43 Ga0207428_10026111 3300027907 Bacteria 4879
44 Ga0268265_10007286 3300028380 Bacteria 7473
45 Ga0307517_10053944 3300028786 Bacteria 3990
46 Ga0307515_10001087 3300028794 Bacteria 62233
47 Ga0307515_10019842 3300028794 Bacteria 12052
48 Ga0307511_10000282 3300030521 Bacteria 53455
49 Ga0307512_10001647 3300030522 Bacteria 30894
50 Ga0307513_10013573 3300031456 Bacteria 9991
51 Ga0307509_10003517 3300031507 Bacteria 23625
52 Ga0307509_10007773 3300031507 Bacteria 13895
53 Ga0307509_10020768 3300031507 Bacteria 7449
54 Ga0307508_10025108 3300031616 Bacteria 5405
55 Ga0307508_10036556 3300031616 Bacteria 4421
56 Ga0307508_10048903 3300031616 Bacteria 3766
57 Ga0307514_10003731 3300031649 Bacteria 14372
58 Ga0316576_10024989 3300031727 Bacteria 4178
59 Ga0307516_10009576 3300031730 Bacteria 10788
60 Ga0307516_10039745 3300031730 Bacteria 4687
61 Ga0307405_10001098 3300031731 Bacteria 11050
62 Ga0307409_100001702 3300031995 Bacteria 11080
63 Ga0307416_100113849 3300032002 Bacteria 2392
64 Ga0307415_100000067 3300032126 Bacteria 43258
65 Ga0307415_100008700 3300032126 Bacteria 5647
66 Ga0307510_10046189 3300033180 Bacteria 4686
67 Ga0395898_0004976 3300037466 Bacteria 14419
68 Ga0395898_0007198 3300037466 Bacteria 11810
69 Ga0395898_0055492 3300037466 Bacteria 3864
70 Ga0439436_0000302 3300041404 Bacteria 11996
71 Ga0439436_0007167 3300041404 Bacteria 3432
72 Ga0439448_0010800 3300042005 Bacteria 2713
73 Ga0439449_0000235 3300042007 Bacteria 19938
74 Ga0439455_0002926 3300042012 Bacteria 3193
75 Ga0439457_000273 3300042014 Bacteria 14230
76 Ga0450894_000232 3300042131 Bacteria 9968
77 Ga0450906_004426 3300042145 Bacteria 2946
78 Ga0451577_0011199 3300042876 Bacteria 8505
79 Ga0466972_0001206 3300044658 Bacteria 12445
80 Ga0466972_0003915 3300044658 Bacteria 7421
81 Ga0466965_0017851 3300044683 Bacteria 3394
82 Ga0466966_0000145 3300044684 Bacteria 45112
83 Ga0466966_0021847 3300044684 Bacteria 4201
84 Ga0466961_0000775 3300044693 Bacteria 20042
85 Ga0466961_0020369 3300044693 Bacteria 4266
86 Ga0466963_0000329 3300044694 Bacteria 21544
87 Ga0453684_0006382 3300044712 Bacteria 22465
88 Ga0466971_0001564 3300044719 Bacteria 9666
89 Ga0466970_0000074 3300044765 Bacteria 40311
90 Ga0466970_0001705 3300044765 Bacteria 10565
91 Ga0466957_0001574 3300044842 Bacteria 12005
92 Ga0466960_0000093 3300044901 Bacteria 29301
93 Ga0466959_0009967 3300045049 Bacteria 6771
94 Ga0451576_0087576 3300045051 Bacteria 3239
95 Ga0451576_0150664 3300045051 Bacteria 2426
96 Ga0466958_0007684 3300045836 Bacteria 5945
97 Ga0466958_0034057 3300045836 Bacteria 3037
98 Ga0466967_0002990 3300045976 Bacteria 10827
99 Ga0466967_0019484 3300045976 Bacteria 5456
100 Ga0495603_0031754 3300046455 Bacteria 3179
101 Ga0495603_0048829 3300046455 Bacteria 2519
102 Ga0495629_0019684 3300046459 Bacteria 4818
103 Ga0495629_0026754 3300046459 Bacteria 4096
104 Ga0495651_0003647 3300046462 Bacteria 11789
105 Ga0495650_0000055 3300046471 Bacteria 308438
106 Ga0495605_0002516 3300046474 Bacteria 11314
107 Ga0495662_0014679 3300046476 Bacteria 3807
108 Ga0495662_0026148 3300046476 Bacteria 2818
109 Ga0495610_0015380 3300046512 Bacteria 4450
110 Ga0495616_0029067 3300046513 Bacteria 2921
111 Ga0495628_0032315 3300046516 Bacteria 4226
112 Ga0495643_0003985 3300046522 Bacteria 10552
113 Ga0495666_0011872 3300046526 Bacteria 4346
114 Ga0495640_0002669 3300046533 Bacteria 14337
115 Ga0495587_0001440 3300046536 Bacteria 15855
116 Ga0495667_0045708 3300046559 Bacteria 2898
117 Ga0495625_0043386 3300046660 Bacteria 3261
118 Ga0495635_0000660 3300046663 Bacteria 22132
119 Ga0495588_0002581 3300046674 Bacteria 7748
120 Ga0495657_0000341 3300046675 Bacteria 43007
121 Ga0495657_0002378 3300046675 Bacteria 15825
122 Ga0495646_0000499 3300046680 Bacteria 20995
123 Ga0495646_0017046 3300046680 Bacteria 4611
124 Ga0495658_0014000 3300046683 Bacteria 4089
125 Ga0495613_0000870 3300046689 Bacteria 23154
126 Ga0495613_0018353 3300046689 Bacteria 5217
127 Ga0495613_0035525 3300046689 Bacteria 3698
128 Ga0495671_0002001 3300046692 Bacteria 13104
129 Ga0495589_0033398 3300046794 Bacteria 2584
130 Ga0495581_0000395 3300047315 Bacteria 21902
131 Ga0495604_0002261 3300047317 Bacteria 15422
132 Ga0495636_0014491 3300047318 Bacteria 3135
133 Ga0495676_0002866 3300047321 Bacteria 15557
134 Ga0495676_0010797 3300047321 Bacteria 8263
135 Ga0495680_0023661 3300047322 Bacteria 5104
136 Ga0495687_017306 3300047443 Bacteria 3599
137 Ga0495675_0001288 3300047444 Bacteria 15182
138 Ga0495681_0000305 3300047470 Bacteria 39318
139 Ga0495684_0072692 3300047471 Bacteria 2613
140 Ga0495593_0000288 3300047673 Bacteria 27330
141 Ga0495593_0029387 3300047673 Bacteria 3013
142 Ga0495602_0014188 3300048088 Bacteria 8098
143 Ga0495614_0016944 3300048089 Bacteria 3167
144 Ga0495626_0010928 3300048091 Bacteria 4822
145 Ga0496109_0006334 3300048912 Bacteria 9969
146 Ga0501031_0003912 3300049568 Bacteria 9583
147 Ga0501033_0006944 3300049570 Bacteria 8842
148 Ga0501034_0008237 3300049571 Bacteria 11034
149 Ga0501034_0009662 3300049571 Bacteria 10088
150 Ga0501036_0010316 3300049572 Bacteria 7708
151 Ga0501036_0016378 3300049572 Bacteria 6192
152 Ga0501038_0006810 3300049574 Bacteria 10557
153 Ga0501039_0031437 3300049575 Bacteria 4093
154 Ga0501041_0006153 3300049577 Bacteria 7013
155 Ga0501042_0007738 3300049578 Bacteria 7058
156 Ga0501042_0020257 3300049578 Bacteria 4628
157 Ga0501043_0003783 3300049579 Bacteria 12439
158 Ga0501046_0012628 3300049580 Bacteria 7181
159 Ga0501046_0024090 3300049580 Bacteria 4998
160 Ga0501047_0059012 3300049581 Bacteria 3705
161 Ga0501048_0000069 3300049582 Bacteria 52868
162 Ga0501048_0015250 3300049582 Bacteria 5677
163 Ga0501070_0000527 3300049586 Bacteria 35102
164 Ga0501070_0029473 3300049586 Bacteria 4601
165 Ga0501071_0017866 3300049587 Bacteria 4901
166 Ga0501072_0001448 3300049588 Bacteria 17791
167 Ga0501073_0000661 3300049589 Bacteria 24171
168 Ga0501073_0004620 3300049589 Bacteria 10347
169 Ga0501074_0000501 3300049590 Bacteria 24026
170 Ga0501074_0001415 3300049590 Bacteria 15970
171 Ga0501075_0005258 3300049591 Bacteria 8849
172 Ga0501076_0036839 3300049592 Bacteria 3835
173 Ga0501076_0069151 3300049592 Bacteria 2821
174 Ga0501077_0004438 3300049593 Bacteria 8521
175 Ga0501077_0008793 3300049593 Bacteria 6267
176 Ga0501227_000657 3300049665 Bacteria 7528
177 Ga0501225_0002816 3300049705 Bacteria 5343
178 Ga0501079_0009740 3300049741 Bacteria 7287
179 Ga0501079_0053018 3300049741 Bacteria 3129
180 Ga0501080_0003509 3300049742 Bacteria 13812
181 Ga0501080_0004600 3300049742 Bacteria 12300
182 Ga0501035_0081021 3300049822 Bacteria 2865
183 Ga0501035_0095950 3300049822 Bacteria 2606
184 Ga0501044_0019862 3300049823 Bacteria 7176
185 Ga0501044_0031212 3300049823 Bacteria 5609
186 Ga0501045_0004809 3300049824 Bacteria 9332
187 Ga0501045_0011803 3300049824 Bacteria 6138
188 nmdc:mga00v17_11153_c1 3300050491 Bacteria 4933
189 nmdc:mga09592_2046_c1 3300050508 Bacteria 16269
190 nmdc:mga0qj67_5434_c1 3300050509 Bacteria 9307
191 nmdc:mga0qj67_81916_c1 3300050509 Bacteria 2587
192 nmdc:mga06r32_681_c1 3300050510 Bacteria 29588
193 nmdc:mga08y16_11498_c1 3300050511 Bacteria 9300
194 nmdc:mga08y16_35046_c1 3300050511 Bacteria 5272
195 Ga0500566_0002317 3300053094 Bacteria 11259
196 Ga0500640_000706 3300053095 Bacteria 8910
197 Ga0500560_006837 3300053107 Bacteria 2646
198 Ga0500616_0039391 3300053153 Bacteria 2548
199 Ga0501084_0000230 3300054114 Bacteria 42013
200 Ga0501084_0003692 3300054114 Bacteria 12423
201 Ga0501084_0004920 3300054114 Bacteria 10915
202 Ga0501084_0028686 3300054114 Bacteria 4653
203 Ga0501082_0048163 3300060353 Bacteria 3673
204 Ga0466962_0001482 3300061719 Bacteria 10944
205 Ga0530510_0012709 3300061734 Bacteria 5918
206 3003002268 3002998708 Bacteria 11715108
207 2547406755 2547132111 Bacteria 8013147
208 2585303831 2582581313 Bacteria 10042643
209 2585315493 2582581314 Bacteria 11452267
210 2616695893 2616644814 Bacteria 11555299
211 2644268299 2643221647 Bacteria 10741251
212 2644438448 2643221678 Bacteria 9540101
213 2644629272 2643221714 Bacteria 9015452
214 2676495077 2675903060 Bacteria 10051191
215 2784586961 2784132148 Bacteria 8627943
216 2785345473 2784746763 Bacteria 9783172
217 2785367409 2784746768 Bacteria 10036182
218 2786668455 2786546132 Bacteria 10419719
219 2808847912 2808606359 Bacteria 9866990
220 2808918662 2808606375 Bacteria 9466072
221 2809230525 2808606448 Bacteria 8656184
222 2812360078 2811994879 Bacteria 9313447
223 2812482142 2811994917 Bacteria 7761064
224 2852637946 2852635781 Bacteria 8251373
225 2862289381 2862281513 Bacteria 9621493
226 2863406737 2863404153 Bacteria 9672205
227 2877683144 2877676314 Bacteria 9512378
228 2895435661 2895427314 Bacteria 13147766
229 2912722128 2912715099 Bacteria 9460473
230 2919473655 2919468124 Bacteria 9133025
231 2946065813 2946064051 Bacteria 8957905
232 2946074154 2946072368 Bacteria 8999607
233 2947231586 2947224130 Bacteria 9938529
234 2954010806 2954002825 Bacteria 9173742
235 2954388359 2954380949 Bacteria 10050426
236 2954674731 2954673503 Bacteria 9685905
237 2954689402 2954682443 Bacteria 9862841
238 2954699174 2954691527 Bacteria 10720516
239 2954703044 2954701450 Bacteria 10834262
240 2954718127 2954711539 Bacteria 10867210
241 2954728095 2954721474 Bacteria 10456478
242 2954733711 2954731030 Bacteria 10243860
243 2954746992 2954740390 Bacteria 10229294
244 2954752595 2954749733 Bacteria 10366972
245 2954766105 2954759201 Bacteria 9358192
246 2990062672 2990059506 Bacteria 9321252
247 3006395281 3006393351 Bacteria 6615579
248 3006495270 3006493962 Bacteria 8825450
249 8008561573 8008558824 Bacteria 10610750
250 8008580519 8008574985 Bacteria 7815457
251 8023631596 8023623736 Bacteria 8593882
252 8048412079 8048406513 Bacteria 8936924
253 8053952738 8053945823 Bacteria 8962862
254 8055072633 8055066027 Bacteria 9479577
255 8055073823 8055066027 Bacteria 9479577
256 8055175731 8055172936 Bacteria 9305943
257 8055175810 8055172936 Bacteria 9305943
258 8056835461 8056829672 Bacteria 9045328
259 rootH2_10031275
260 Ga0006562J51391_1049783
261 Ga0070683_100012791
262 Ga0068868_100006291
263 Ga0070675_100010242
264 Ga0070714_100000003
265 Ga0070714_100018017
266 Ga0070714_100086256
267 Ga0070700_100000083
268 Ga0070663_100007832
269 Ga0070662_100018791
270 Ga0070684_100002310
271 Ga0070664_100003319
272 Ga0068857_100045830
273 Ga0068862_100031269
274 Ga0081538_10007611
275 Ga0081539_10004047
276 Ga0070717_10038372
277 Ga0075364_10012136
278 Ga0075367_10007631
279 Ga0075430_100000650
280 Ga0075431_100000237
281 Ga0079104_1010422
282 Ga0111539_10014086
283 Ga0111539_10026829
284 Ga0105245_10000038
285 Ga0105237_10111337
286 Ga0105246_10017069
287 Ga0182008_10001517
288 Ga0182007_10001839
289 Ga0183367_1010
290 Ga0207650_10049853
291 Ga0207659_10007075
292 Ga0207687_10000183
293 Ga0207664_10000039
294 Ga0207706_10031645
295 Ga0207661_10007490
296 Ga0207678_10032807
297 Ga0207708_10000014
298 Ga0207708_10003198
299 Ga0207674_10065740
300 Ga0207428_10007153
301 Ga0207428_10026111
302 Ga0268265_10007286
303 Ga0307517_10053944
304 Ga0307515_10001087
305 Ga0307515_10019842
306 Ga0307511_10000282
307 Ga0307512_10001647
308 Ga0307513_10013573
309 Ga0307509_10003517
310 Ga0307509_10007773
311 Ga0307509_10020768
312 Ga0307508_10025108
313 Ga0307508_10036556
314 Ga0307508_10048903
315 Ga0307514_10003731
316 Ga0316576_10024989
317 Ga0307516_10009576
318 Ga0307516_10039745
319 Ga0307405_10001098
320 Ga0307409_100001702
321 Ga0307416_100113849
322 Ga0307415_100000067
323 Ga0307415_100008700
324 Ga0307510_10046189
325 Ga0395898_0004976
326 Ga0395898_0007198
327 Ga0395898_0055492
328 Ga0439436_0000302
329 Ga0439436_0007167
330 Ga0439448_0010800
331 Ga0439449_0000235
332 Ga0439455_0002926
333 Ga0439457_000273
334 Ga0450894_000232
335 Ga0450906_004426
336 Ga0451577_0011199
337 Ga0466972_0001206
338 Ga0466972_0003915
339 Ga0466965_0017851
340 Ga0466966_0000145
341 Ga0466966_0021847
342 Ga0466961_0000775
343 Ga0466961_0020369
344 Ga0466963_0000329
345 Ga0453684_0006382
346 Ga0466971_0001564
347 Ga0466970_0000074
348 Ga0466970_0001705
349 Ga0466957_0001574
350 Ga0466960_0000093
351 Ga0466959_0009967
352 Ga0451576_0087576
353 Ga0451576_0150664
354 Ga0466958_0007684
355 Ga0466958_0034057
356 Ga0466967_0002990
357 Ga0466967_0019484
358 Ga0495603_0031754
359 Ga0495603_0048829
360 Ga0495629_0019684
361 Ga0495629_0026754
362 Ga0495651_0003647
363 Ga0495650_0000055
364 Ga0495605_0002516
365 Ga0495662_0014679
366 Ga0495662_0026148
367 Ga0495610_0015380
368 Ga0495616_0029067
369 Ga0495628_0032315
370 Ga0495643_0003985
371 Ga0495666_0011872
372 Ga0495640_0002669
373 Ga0495587_0001440
374 Ga0495667_0045708
375 Ga0495625_0043386
376 Ga0495635_0000660
377 Ga0495588_0002581
378 Ga0495657_0000341
379 Ga0495657_0002378
380 Ga0495646_0000499
381 Ga0495646_0017046
382 Ga0495658_0014000
383 Ga0495613_0000870
384 Ga0495613_0018353
385 Ga0495613_0035525
386 Ga0495671_0002001
387 Ga0495589_0033398
388 Ga0495581_0000395
389 Ga0495604_0002261
390 Ga0495636_0014491
391 Ga0495676_0002866
392 Ga0495676_0010797
393 Ga0495680_0023661
394 Ga0495687_017306
395 Ga0495675_0001288
396 Ga0495681_0000305
397 Ga0495684_0072692
398 Ga0495593_0000288
399 Ga0495593_0029387
400 Ga0495602_0014188
401 Ga0495614_0016944
402 Ga0495626_0010928
403 Ga0496109_0006334
404 Ga0501031_0003912
405 Ga0501033_0006944
406 Ga0501034_0008237
407 Ga0501034_0009662
408 Ga0501036_0010316
409 Ga0501036_0016378
410 Ga0501038_0006810
411 Ga0501039_0031437
412 Ga0501041_0006153
413 Ga0501042_0007738
414 Ga0501042_0020257
415 Ga0501043_0003783
416 Ga0501046_0012628
417 Ga0501046_0024090
418 Ga0501047_0059012
419 Ga0501048_0000069
420 Ga0501048_0015250
421 Ga0501070_0000527
422 Ga0501070_0029473
423 Ga0501071_0017866
424 Ga0501072_0001448
425 Ga0501073_0000661
426 Ga0501073_0004620
427 Ga0501074_0000501
428 Ga0501074_0001415
429 Ga0501075_0005258
430 Ga0501076_0036839
431 Ga0501076_0069151
432 Ga0501077_0004438
433 Ga0501077_0008793
434 Ga0501227_000657
435 Ga0501225_0002816
436 Ga0501079_0009740
437 Ga0501079_0053018
438 Ga0501080_0003509
439 Ga0501080_0004600
440 Ga0501035_0081021
441 Ga0501035_0095950
442 Ga0501044_0019862
443 Ga0501044_0031212
444 Ga0501045_0004809
445 Ga0501045_0011803
446 nmdc:mga00v17_11153_c1
447 nmdc:mga09592_2046_c1
448 nmdc:mga0qj67_5434_c1
449 nmdc:mga0qj67_81916_c1
450 nmdc:mga06r32_681_c1
451 nmdc:mga08y16_11498_c1
452 nmdc:mga08y16_35046_c1
453 Ga0500566_0002317
454 Ga0500640_000706
455 Ga0500560_006837
456 Ga0500616_0039391
457 Ga0501084_0000230
458 Ga0501084_0003692
459 Ga0501084_0004920
460 Ga0501084_0028686
461 Ga0501082_0048163
462 Ga0466962_0001482
463 Ga0530510_0012709
464 3003002268
465 2547406755
466 2585303831
467 2585315493
468 2616695893
469 2644268299
470 2644438448
471 2644629272
472 2676495077
473 2784586961
474 2785345473
475 2785367409
476 2786668455
477 2808847912
478 2808918662
479 2809230525
480 2812360078
481 2812482142
482 2852637946
483 2862289381
484 2863406737
485 2877683144
486 2895435661
487 2912722128
488 2919473655
489 2946065813
490 2946074154
491 2947231586
492 2954010806
493 2954388359
494 2954674731
495 2954689402
496 2954699174
497 2954703044
498 2954718127
499 2954728095
500 2954733711
501 2954746992
502 2954752595
503 2954766105
504 2990062672
505 3006395281
506 3006495270
507 8008561573
508 8008580519
509 8023631596
510 8048412079
511 8053952738
512 8055072633
513 8055073823
514 8055175731
515 8055175810
516 8056835461

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01568

Molydop_binding

Molydopterin dinucleotide binding domain

684

804

0.98

PF04879

Molybdop_Fe4S4

Molybdopterin oxidoreductase Fe4S4 domain

6

57

0.93

PF00384

Molybdopterin

Molybdopterin oxidoreductase

63

500

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ln3-assembly1.cif.gz_A cryo-em structure of human p97 in complex with npl4/ufd1 and polyubiquitinated ub-eos (fom, class 2) 0.8675 491 538
3hu2-assembly1.cif.gz_B structure of p97 n-d1 r86a mutant in complex with atpgs 0.8672 491 538
8hrz-assembly1.cif.gz_D crystal structure of the p97-n/d1 hexamer in complex with six p47-ubx domains 0.8558 489 538
6opc-assembly1.cif.gz_F cdc48 hexamer in a complex with substrate and shp1(ubx domain) 0.8529 494 538
3tiw-assembly2.cif.gz_B crystal structure of p97n in complex with the c-terminus of gp78 0.8481 489 538
ID Description Score Start End Superfamily
2vpwA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8815 236 302 3.40.50.740
af_P46468_319_424_2.40.40.20 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.8812 494 538 2.40.40.20
3ir7A07 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.8752 31 95 3.40.228.10
1siwA13 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.8713 494 543 2.40.40.20
2vpwA03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.8659 9 199 3.40.228.10
ID Description Score Start End GO Terms
AF-A0A2S8NBV8-F1-model_v4 deleted 0.9855 222 304
AF-A0A7Y5EF49-F1-model_v4 Molybdopterin-dependent oxidoreductase 0.9766 5 154 GO:0016020
GO:0016491
AF-A0A7I7LFE0-F1-model_v4 4Fe-4S Mo/W bis-MGD-type domain-containing protein 0.9744 6 205 GO:0016491
GO:0046872
GO:0051539
AF-A0A6G3WUX3-F1-model_v4 Molybdopterin-dependent oxidoreductase 0.9737 12 347 GO:0016020
GO:0016491
AF-A0A534PWS6-F1-model_v4 Molybdopterin oxidoreductase family protein 0.9736 5 207 GO:0016491
GO:0046872
GO:0051539

Map