F368472

General Info

Members Datasets Scaffolds Average Seq Length
258 209 200 318

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2834641062|2834644257
Length 352
Sequence NPQATALAATPAAASVAESASASHDALRRRRATPAARLIARVLLQRGVQAAVVAALVGSLSFLMMRLLPGDMAFRIAAGRYGYDMVTAQAADAVRAELALDQPWFDGLLAWWSRLLHLDLGTSTVTGAPVAAEIAHQLGHTLGLALAALAVSTLIALPLGFAAGRHAGGQTDRITLALSVLLRALPPFVLGMLLVLAFAVELDWLPAGGHGEHGSWIAPALTLGLGLAATAMRVARDAMAGVVAAPYWLFARTKGLTDRVAMARHGVRNAAVPVVAYLGVQLVYLLEGVVVVETLFAWPGIGHALVHAIFGRDVPMIQGTALMMGLLFVVLNAAVDLACMAIDPRLRARVAR

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
3 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
4 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
5 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
6 2547132374 Acidovorax radicis N35 Isolate Unclassified
7 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
8 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
9 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
10 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
11 2643221558 Rhizobium sp. Root149 Isolate Unclassified
12 2643221570 Acidovorax sp. Root568 Isolate Unclassified
13 2643221652 Acidovorax sp. Root402 Isolate Unclassified
14 2643221717 Acidovorax sp. Root267 Isolate Unclassified
15 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
16 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
17 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
18 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
19 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
20 2847085930 Erwinia persicina B64 Isolate Bulb
21 2857553236 Duganella sp. R-74557 Isolate Unclassified
22 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
23 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
24 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
25 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
26 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
27 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
28 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
29 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
30 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
31 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
32 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
33 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
34 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
35 2919476304 Duganella sp. 3397 Isolate Unclassified
36 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
37 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
38 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
39 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
40 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
41 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
42 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
43 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
44 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
45 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
46 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
47 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
48 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
49 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
50 3007252601 Pseudomonas punonensis D1-6 Isolate Unclassified
51 3007315729 Pseudomonas argentinensis SA190 Isolate Unclassified
52 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
53 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
54 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
55 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
56 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
57 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
58 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
59 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
60 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
61 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
62 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
63 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
64 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
65 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
66 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
67 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
68 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
69 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
70 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
71 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
72 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
73 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
74 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
75 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
76 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
77 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
78 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
79 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
80 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
81 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
82 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
83 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
84 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
85 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
86 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
87 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
88 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
89 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
90 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
91 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
92 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
93 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
94 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
95 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
96 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
99 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
100 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
105 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
106 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
107 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
109 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
110 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
113 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
116 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
117 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
118 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
120 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
128 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
130 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
131 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
132 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
133 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
134 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
135 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
136 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
137 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
138 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
139 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
140 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
141 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
142 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
143 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
144 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
145 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
146 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
147 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
148 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
149 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
150 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
153 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
154 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
155 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
156 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
157 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
158 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
159 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
160 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
161 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
162 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
163 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
164 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
165 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
166 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
167 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
170 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
171 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
172 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
173 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
174 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
175 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
178 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
190 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
191 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
192 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
193 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
194 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
195 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
196 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
198 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
199 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
200 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
201 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
202 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
203 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
204 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
205 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified
206 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
207 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
208 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
209 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.52
Metatranscriptomes 0
Isolates 22.48

Biome Distribution

Category Percentage (%)
Aerial Root 0.78
Bulb 0.39
Endosphere 24.81
Nodule 1.94
Rhizoplane 0.39
Rhizosphere 48.45
Stem 0
Stem Tuber 0
Unclassified 23.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000936 3300000549 Bacteria 4525
2 JGI25156J39149_1002760 3300002705 Bacteria 6100
3 JGI25154J39366_1000146 3300002738 Bacteria 55646
4 JGI25150J39212_1001217 3300002774 Bacteria 7572
5 JGI25159J45721_1000033 3300002987 Bacteria 89604
6 JGI25151J46595_10000233 3300003187 Bacteria 66027
7 JGI25151J46595_10000338 3300003187 Bacteria 50270
8 JGI25151J46595_10000354 3300003187 Bacteria 48823
9 JGI25153J46596_10000118 3300003215 Bacteria 89604
10 rootL2_10211231 3300003322 Bacteria 3719
11 rootH1_10181125 3300003323 Bacteria 1489
12 JGI25160J50197_1000094 3300003354 Bacteria 89080
13 JGI25161J50226_1000587 3300003374 Bacteria 15371
14 Ga0055538_1000050 3300003751 Bacteria 130812
15 Ga0055539_1000074 3300003752 Bacteria 130812
16 Ga0055533_1000081 3300003756 Bacteria 130812
17 Ga0055525_1000108 3300003759 Bacteria 130812
18 Ga0055526_1000081 3300003771 Bacteria 87291
19 Ga0055526_1002434 3300003771 Bacteria 12611
20 Ga0055526_1020906 3300003771 Bacteria 2302
21 Ga0055537_1000045 3300003773 Bacteria 89080
22 Ga0055537_1012031 3300003773 Bacteria 1712
23 Ga0055524_1000135 3300003775 Bacteria 87291
24 Ga0055524_1000551 3300003775 Bacteria 28323
25 Ga0055536_1000201 3300003781 Bacteria 48808
26 Ga0055534_1000053 3300003784 Bacteria 90213
27 Ga0055534_1000104 3300003784 Bacteria 64767
28 Ga0055534_1001984 3300003784 Bacteria 7475
29 Ga0055528_1000056 3300003790 Bacteria 89604
30 Ga0055531_10000797 3300003794 Bacteria 26133
31 Ga0055541_1000052 3300003841 Bacteria 130812
32 Ga0055543_1000083 3300004625 Bacteria 83272
33 Ga0065165_1000322 3300005262 Bacteria 78209
34 Ga0068855_100000203 3300005563 Bacteria 76572
35 Ga0068855_100106479 3300005563 Bacteria 3223
36 Ga0068854_100003810 3300005578 Bacteria 9435
37 Ga0075428_100001901 3300006844 Bacteria 22397
38 Ga0075430_100002166 3300006846 Bacteria 16256
39 Ga0075431_100001389 3300006847 Bacteria 22230
40 Ga0079104_1002476 3300006946 Bacteria 9901
41 Ga0099826_10000026 3300006948 Bacteria 146276
42 Ga0105251_10051685 3300009011 Bacteria 1959
43 Ga0105244_10062166 3300009036 Bacteria 1877
44 Ga0105240_10028095 3300009093 Bacteria 7355
45 Ga0114129_10051703 3300009147 Bacteria 5767
46 Ga0105237_10006145 3300009545 Bacteria 13420
47 Ga0105238_10000101 3300009551 Bacteria 95764
48 Ga0105239_10014596 3300010375 Bacteria 8713
49 Ga0157371_10000384 3300013102 Bacteria 55628
50 Ga0157371_10002278 3300013102 Bacteria 18496
51 Ga0157369_10001299 3300013105 Bacteria 31050
52 Ga0157372_10023708 3300013307 Bacteria 6656
53 Ga0182008_10012619 3300014497 Bacteria 4458
54 Ga0182006_1000008 3300015261 Bacteria 449652
55 Ga0182006_1000907 3300015261 Bacteria 19768
56 Ga0182005_1000022 3300015265 Bacteria 266181
57 Ga0163161_10000180 3300017792 Bacteria 57748
58 Ga0163161_10057392 3300017792 Bacteria 2828
59 Ga0213872_10002192 3300021361 Bacteria 11700
60 Ga0209435_100057 3300025206 Bacteria 82390
61 Ga0209784_100002 3300025224 Bacteria 1753105
62 Ga0209566_100003 3300025225 Bacteria 1753105
63 Ga0209674_100004 3300025226 Bacteria 1753105
64 Ga0209563_100006 3300025230 Bacteria 1753105
65 Ga0207425_1000090 3300025245 Bacteria 90459
66 Ga0209646_1000061 3300025246 Bacteria 255495
67 Ga0209026_1000462 3300025250 Bacteria 31297
68 Ga0209677_100003 3300025253 Bacteria 1753105
69 Ga0209759_1000371 3300025256 Bacteria 56139
70 Ga0209129_1000030 3300025258 Bacteria 391958
71 Ga0209565_1000019 3300025263 Bacteria 438920
72 Ga0209565_1000160 3300025263 Bacteria 90271
73 Ga0209673_1000095 3300025273 Bacteria 197466
74 Ga0209673_1018017 3300025273 Bacteria 2582
75 Ga0209130_1000011 3300025284 Bacteria 431723
76 Ga0209675_1000031 3300025291 Bacteria 273599
77 Ga0209675_1000078 3300025291 Bacteria 156111
78 Ga0209675_1011663 3300025291 Bacteria 2898
79 Ga0209675_1014179 3300025291 Bacteria 2442
80 Ga0209676_1000121 3300025292 Bacteria 198920
81 Ga0209676_1001314 3300025292 Bacteria 25234
82 Ga0209025_1000051 3300025294 Bacteria 330080
83 Ga0209025_1000078 3300025294 Bacteria 271683
84 Ga0209025_1000527 3300025294 Bacteria 72823
85 Ga0209025_1002019 3300025294 Bacteria 23155
86 Ga0209564_1000056 3300025295 Bacteria 340873
87 Ga0209564_1000133 3300025295 Bacteria 189140
88 Ga0209758_1000037 3300025297 Bacteria 439101
89 Ga0209758_1017123 3300025297 Bacteria 3632
90 Ga0209256_1000043 3300025299 Bacteria 340873
91 Ga0209256_1000452 3300025299 Bacteria 62144
92 Ga0209256_1000538 3300025299 Bacteria 54992
93 Ga0207426_1000029 3300025302 Bacteria 473835
94 Ga0207426_1017097 3300025302 Bacteria 2587
95 Ga0209051_1030905 3300025303 Bacteria 2070
96 Ga0209051_1051029 3300025303 Bacteria 1380
97 Ga0209257_1000127 3300025304 Bacteria 214847
98 Ga0207655_1061832 3300025728 Bacteria 1443
99 Ga0207695_10001942 3300025913 Bacteria 32085
100 Ga0207671_10017551 3300025914 Bacteria 5513
101 Ga0207694_10000344 3300025924 Bacteria 43901
102 Ga0207667_10000055 3300025949 Bacteria 223770
103 Ga0207667_10018444 3300025949 Bacteria 7824
104 Ga0207667_10087742 3300025949 Bacteria 3218
105 Ga0209281_1002075 3300027111 Bacteria 8992
106 Ga0209371_1000089 3300027312 Bacteria 173483
107 Ga0209282_1000010 3300027666 Bacteria 231627
108 Ga0268256_1000103 3300030500 Bacteria 129125
109 Ga0307408_100014244 3300031548 Bacteria 5281
110 Ga0307408_100119107 3300031548 Bacteria 2042
111 Ga0307405_10001751 3300031731 Bacteria 9277
112 Ga0307405_10037160 3300031731 Bacteria 2924
113 Ga0307413_10018618 3300031824 Bacteria 3649
114 Ga0307410_10014288 3300031852 Bacteria 4667
115 Ga0307407_10001243 3300031903 Bacteria 9062
116 Ga0307407_10145586 3300031903 Bacteria 1533
117 Ga0307412_10036932 3300031911 Bacteria 3135
118 Ga0307412_10066954 3300031911 Bacteria 2436
119 Ga0307409_100014597 3300031995 Bacteria 5118
120 Ga0307416_100068216 3300032002 Bacteria 2937
121 Ga0307414_10080555 3300032004 Bacteria 2381
122 Ga0307411_10010943 3300032005 Bacteria 4866
123 Ga0307415_100007067 3300032126 Bacteria 6110
124 Ga0400484_02268 3300038725 Bacteria 7853
125 Ga0400483_053433 3300039062 Bacteria 1933
126 Ga0400483_099993 3300039062 Bacteria 19421
127 Ga0400483_114802 3300039062 Bacteria 4447
128 Ga0400483_185041 3300039062 Bacteria 2209
129 Ga0400483_185314 3300039062 Bacteria 20444
130 Ga0400483_201231 3300039062 Bacteria 2621
131 Ga0400483_232861 3300039062 Unclassified 1182
132 Ga0400483_260392 3300039062 Bacteria 16152
133 Ga0436361_0315955 3300039447 Bacteria 19338
134 Ga0436361_0354912 3300039447 Bacteria 3420
135 Ga0439438_002085 3300041405 Bacteria 8658
136 Ga0439442_000628 3300042002 Bacteria 7568
137 Ga0439449_0001065 3300042007 Bacteria 10808
138 Ga0439449_0073307 3300042007 Bacteria 1262
139 Ga0439452_008161 3300042010 Bacteria 3167
140 Ga0439446_0009400 3300042156 Bacteria 2617
141 Ga0439464_0006448 3300042439 Bacteria 3055
142 Ga0439464_0024381 3300042439 Bacteria 1673
143 Ga0451577_0000237 3300042876 Bacteria 109473
144 Ga0453684_0000121 3300044712 Bacteria 341067
145 Ga0495605_0003318 3300046474 Bacteria 9636
146 Ga0495596_0000062 3300046500 Bacteria 79198
147 Ga0495610_0000112 3300046512 Bacteria 94977
148 Ga0495616_0007133 3300046513 Bacteria 6705
149 Ga0495643_0122204 3300046522 Bacteria 1314
150 Ga0495644_0022435 3300046523 Bacteria 2406
151 Ga0495648_0017512 3300046524 Bacteria 5118
152 Ga0495609_0000954 3300046538 Bacteria 20899
153 Ga0495609_0001946 3300046538 Bacteria 13150
154 Ga0495597_0016008 3300046542 Bacteria 3546
155 Ga0495661_0007736 3300046665 Bacteria 7486
156 Ga0495669_0024592 3300046684 Bacteria 2623
157 Ga0495671_0001522 3300046692 Bacteria 15467
158 Ga0495660_0000024 3300046810 Bacteria 268209
159 Ga0495660_0000313 3300046810 Bacteria 43991
160 Ga0495672_0005698 3300047320 Bacteria 9812
161 Ga0495681_0005480 3300047470 Bacteria 8483
162 Ga0496116_0000326 3300048919 Bacteria 77452
163 Ga0496116_0006375 3300048919 Bacteria 10724
164 Ga0496119_0000364 3300048922 Bacteria 63611
165 Ga0496119_0001407 3300048922 Bacteria 29119
166 Ga0496120_0000004 3300048923 Bacteria 534793
167 Ga0496120_0000229 3300048923 Bacteria 96389
168 Ga0496121_0001757 3300048924 Bacteria 35327
169 Ga0496122_0000516 3300048925 Bacteria 79994
170 Ga0496123_0000244 3300048926 Bacteria 109574
171 Ga0496124_0019135 3300048927 Bacteria 6389
172 Ga0496125_0000864 3300048928 Bacteria 48567
173 Ga0496126_0161553 3300048929 Bacteria 1914
174 Ga0495678_000002 3300049459 Bacteria 999613
175 Ga0501031_0069920 3300049568 Bacteria 2286
176 Ga0501032_0157049 3300049569 Bacteria 1494
177 Ga0501033_0054794 3300049570 Bacteria 2949
178 Ga0501036_0037349 3300049572 Bacteria 4109
179 Ga0501037_0069605 3300049573 Bacteria 2561
180 Ga0501040_0037443 3300049576 Bacteria 3295
181 Ga0501041_0050525 3300049577 Bacteria 2534
182 Ga0501042_0053992 3300049578 Bacteria 2866
183 Ga0501043_0036325 3300049579 Bacteria 3875
184 Ga0501046_0030881 3300049580 Bacteria 4347
185 Ga0501048_0032585 3300049582 Bacteria 3765
186 Ga0501070_0334128 3300049586 Bacteria 1231
187 Ga0501071_0017081 3300049587 Bacteria 4999
188 Ga0501072_0017696 3300049588 Bacteria 5481
189 Ga0501077_0046172 3300049593 Bacteria 2768
190 Ga0501079_0086405 3300049741 Bacteria 2427
191 Ga0501080_0221461 3300049742 Bacteria 1731
192 Ga0501081_0028440 3300049743 Bacteria 3773
193 Ga0501035_0034595 3300049822 Bacteria 4590
194 Ga0501044_0142604 3300049823 Bacteria 2384
195 nmdc:mga06r32_1342_c1 3300050510 Bacteria 22205
196 Ga0500618_000283 3300053125 Bacteria 38584
197 Ga0500618_006920 3300053125 Bacteria 3281
198 Ga0501084_0041501 3300054114 Bacteria 3849
199 Ga0590075_007435 3300059424 Bacteria 2603
200 Ga0530510_0176714 3300061734 Bacteria 1582

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300003751 Ga0055538_1000050 Ga0055538_100005059 271
2 3300003752 Ga0055539_1000074 Ga0055539_100007459 271
3 3300003756 Ga0055533_1000081 Ga0055533_100008159 271
4 3300003759 Ga0055525_1000108 Ga0055525_100010866 271
5 3300003841 Ga0055541_1000052 Ga0055541_100005259 271
6 3300021361 Ga0213872_10002192 Ga0213872_100021924 271
7 3300025224 Ga0209784_100002 Ga0209784_1000021415 271
8 3300025225 Ga0209566_100003 Ga0209566_1000031415 271
9 3300025226 Ga0209674_100004 Ga0209674_1000041415 271
10 3300025230 Ga0209563_100006 Ga0209563_1000061415 271
11 3300025253 Ga0209677_100003 Ga0209677_1000031415 271
12 3300039447 Ga0436361_0315955 Ga0436361_0315955_12342_13289 271
13 3300039447 Ga0436361_0354912 Ga0436361_0354912_2353_3300 271
14 3300017792 Ga0163161_10057392 Ga0163161_100573922 272
15 3300032004 Ga0307414_10080555 Ga0307414_100805552 273
16 3300003784 Ga0055534_1001984 Ga0055534_10019844 276
17 3300039062 Ga0400483_232861 Ga0400483_232861_78_977 277
18 3300048929 Ga0496126_0161553 Ga0496126_0161553_669_1613 278
19 3300049576 Ga0501040_0037443 Ga0501040_0037443_36_974 280
20 3300006948 Ga0099826_10000026 Ga0099826_10000026125 281
21 3300027666 Ga0209282_1000010 Ga0209282_1000010188 281
22 3300046474 Ga0495605_0003318 Ga0495605_0003318_3720_4751 281
23 3300046500 Ga0495596_0000062 Ga0495596_0000062_16136_17167 281
24 3300046512 Ga0495610_0000112 Ga0495610_0000112_6161_7192 281
25 3300046513 Ga0495616_0007133 Ga0495616_0007133_4407_5438 281
26 3300046524 Ga0495648_0017512 Ga0495648_0017512_3508_4539 281
27 3300046538 Ga0495609_0001946 Ga0495609_0001946_1343_2374 281
28 3300046542 Ga0495597_0016008 Ga0495597_0016008_2094_3125 281
29 3300046665 Ga0495661_0007736 Ga0495661_0007736_4173_5204 281
30 3300046684 Ga0495669_0024592 Ga0495669_0024592_644_1675 281
31 3300046692 Ga0495671_0001522 Ga0495671_0001522_13923_14954 281
32 3300047320 Ga0495672_0005698 Ga0495672_0005698_3862_4893 281
33 3300048919 Ga0496116_0006375 Ga0496116_0006375_5478_6509 281
34 3300048924 Ga0496121_0001757 Ga0496121_0001757_23371_24402 281
35 3300048925 Ga0496122_0000516 Ga0496122_0000516_50649_51680 281
36 3300048926 Ga0496123_0000244 Ga0496123_0000244_50468_51499 281
37 3300053125 Ga0500618_000283 Ga0500618_000283_19557_20525 282
38 3300003323 rootH1_10181125 rootH1_101811252 283
39 3300042002 Ga0439442_000628 Ga0439442_000628_4083_5003 284
40 iso_pu_bacteria 2511231221 2512037384 284
41 iso_pu_bacteria 2643221558 2643810232 284
42 iso_pu_bacteria 2885080285 2885081080 284
43 iso_pu_bacteria 2919704043 2919704311 284
44 3300005563 Ga0068855_100000203 Ga0068855_10000020324 285
45 3300025949 Ga0207667_10000055 Ga0207667_1000005531 285
46 3300038725 Ga0400484_02268 Ga0400484_02268_4535_5464 285
47 3300039062 Ga0400483_114802 Ga0400483_114802_1230_2204 285
48 3300039062 Ga0400483_260392 Ga0400483_260392_1249_2223 285
49 iso_pu_bacteria 2510065053 2510282156 285
50 iso_pu_bacteria 2510065055 2510291639 285
51 iso_pu_bacteria 2510065058 2510310304 285
52 iso_pu_bacteria 2773857672 2774130858 285
53 iso_pu_bacteria 2847085930 2847086972 285
54 iso_pu_bacteria 2908669403 2908670284 285
55 iso_pu_bacteria 2917832318 2917835870 285
56 iso_pu_bacteria 2919125081 2919125749 285
57 iso_pu_bacteria 2974298342 2974300007 285
58 iso_pu_bacteria 2984499530 2984502387 285
59 iso_pu_bacteria 2984504281 2984508937 285
60 iso_pu_bacteria 3007252601 3007252831 285
61 iso_pu_bacteria 3007315729 3007320121 285
62 iso_pu_bacteria 8005658619 8005661326 285
63 iso_pu_bacteria 8016728285 8016728762 285
64 3300046810 Ga0495660_0000024 Ga0495660_0000024_119371_120345 286
65 3300048927 Ga0496124_0019135 Ga0496124_0019135_1545_2519 286
66 iso_pu_bacteria 2894817345 2894821279 286
67 iso_pu_bacteria 2899275550 2899276469 286
68 iso_pu_bacteria 8045864390 8045868682 286
69 iso_pu_bacteria 2919493220 2919496369 287
70 iso_pu_bacteria 2919543075 2919544261 287
71 iso_pu_bacteria 8057160832 8057163553 287
72 3300009011 Ga0105251_10051685 Ga0105251_100516852 288
73 3300009036 Ga0105244_10062166 Ga0105244_100621662 288
74 3300013102 Ga0157371_10000384 Ga0157371_1000038436 288
75 3300013102 Ga0157371_10002278 Ga0157371_1000227813 288
76 3300013105 Ga0157369_10001299 Ga0157369_100012993 288
77 3300013307 Ga0157372_10023708 Ga0157372_100237084 288
78 3300025728 Ga0207655_1061832 Ga0207655_10618322 288
79 3300027312 Ga0209371_1000089 Ga0209371_100008945 288
80 3300030500 Ga0268256_1000103 Ga0268256_100010377 288
81 3300039062 Ga0400483_053433 Ga0400483_053433_321_1253 288
82 3300041405 Ga0439438_002085 Ga0439438_002085_7431_8366 288
83 3300042010 Ga0439452_008161 Ga0439452_008161_891_1826 288
84 3300042439 Ga0439464_0006448 Ga0439464_0006448_733_1668 288
85 3300042439 Ga0439464_0024381 Ga0439464_0024381_213_1148 288
86 3300048919 Ga0496116_0000326 Ga0496116_0000326_6440_7375 288
87 3300048922 Ga0496119_0000364 Ga0496119_0000364_24166_25101 288
88 3300048922 Ga0496119_0001407 Ga0496119_0001407_14081_15016 288
89 3300048923 Ga0496120_0000004 Ga0496120_0000004_435848_436783 288
90 3300048923 Ga0496120_0000229 Ga0496120_0000229_55157_56092 288
91 3300005563 Ga0068855_100106479 Ga0068855_1001064792 289
92 3300025949 Ga0207667_10087742 Ga0207667_100877422 289
93 3300039062 Ga0400483_185041 Ga0400483_185041_853_1791 289
94 3300042007 Ga0439449_0001065 Ga0439449_0001065_110_1045 289
95 iso_pu_bacteria 2565956521 2566038342 289
96 iso_pu_bacteria 2842775625 2842776675 289
97 3300059424 Ga0590075_007435 Ga0590075_007435_364_1341 290
98 3300003187 JGI25151J46595_10000338 JGI25151J46595_100003383 291
99 3300003771 Ga0055526_1002434 Ga0055526_10024343 291
100 3300003781 Ga0055536_1000201 Ga0055536_100020127 291
101 3300003784 Ga0055534_1000104 Ga0055534_100010417 291
102 3300025291 Ga0209675_1000078 Ga0209675_100007888 291
103 3300025292 Ga0209676_1000121 Ga0209676_100012196 291
104 3300025294 Ga0209025_1000051 Ga0209025_100005192 291
105 3300025295 Ga0209564_1000133 Ga0209564_100013391 291
106 iso_pu_bacteria 2521172590 2521557499 291
107 iso_pu_bacteria 2551306416 2553006439 291
108 iso_pu_bacteria 2574179768 2574433127 291
109 iso_pu_bacteria 2818991449 2819618402 291
110 iso_pu_bacteria 2904439833 2904441797 291
111 iso_pu_bacteria 2904530477 2904531280 291
112 iso_pu_bacteria 2904584206 2904587064 291
113 iso_pu_bacteria 2904589729 2904592903 291
114 iso_pu_bacteria 2904601388 2904604330 291
115 iso_pu_bacteria 2919046199 2919050015 291
116 iso_pu_bacteria 2919079590 2919082135 291
117 iso_pu_bacteria 2923510766 2923516175 291
118 iso_pu_bacteria 2923525760 2923528887 291
119 iso_pu_bacteria 2928130867 2928134889 291
120 3300039062 Ga0400483_099993 Ga0400483_099993_18037_18987 292
121 3300039062 Ga0400483_185314 Ga0400483_185314_11315_12265 292
122 iso_pu_bacteria 2558860983 2561469148 292
123 iso_pu_bacteria 2773857762 2774392394 292
124 iso_pu_bacteria 2857553236 2857555311 292
125 iso_pu_bacteria 2919476304 2919477672 292
126 iso_pu_bacteria 2956939328 2956939398 292
127 3300048928 Ga0496125_0000864 Ga0496125_0000864_46096_47067 293
128 iso_pu_bacteria 2998344455 2998348008 293
129 3300014497 Ga0182008_10012619 Ga0182008_100126194 294
130 3300031731 Ga0307405_10001751 Ga0307405_100017512 294
131 3300031903 Ga0307407_10145586 Ga0307407_101455862 294
132 3300039062 Ga0400483_201231 Ga0400483_201231_1123_2076 294
133 3300042876 Ga0451577_0000237 Ga0451577_0000237_80900_81895 294
134 3300044712 Ga0453684_0000121 Ga0453684_0000121_27603_28598 294
135 3300003322 rootL2_10211231 rootL2_102112312 295
136 3300005578 Ga0068854_100003810 Ga0068854_1000038105 295
137 3300006844 Ga0075428_100001901 Ga0075428_10000190110 295
138 3300006846 Ga0075430_100002166 Ga0075430_10000216610 295
139 3300006847 Ga0075431_100001389 Ga0075431_10000138912 295
140 3300009093 Ga0105240_10028095 Ga0105240_100280956 295
141 3300009147 Ga0114129_10051703 Ga0114129_100517032 295
142 3300009545 Ga0105237_10006145 Ga0105237_100061453 295
143 3300009551 Ga0105238_10000101 Ga0105238_1000010120 295
144 3300010375 Ga0105239_10014596 Ga0105239_100145963 295
145 3300015261 Ga0182006_1000907 Ga0182006_100090715 295
146 3300025913 Ga0207695_10001942 Ga0207695_1000194216 295
147 3300025914 Ga0207671_10017551 Ga0207671_100175514 295
148 3300025924 Ga0207694_10000344 Ga0207694_1000034415 295
149 3300025949 Ga0207667_10018444 Ga0207667_100184445 295
150 3300050510 nmdc:mga06r32_1342_c1 nmdc:mga06r32_1342_c1_11874_12830 295
151 iso_pu_bacteria 2547132374 2548497583 295
152 iso_pu_bacteria 2643221570 2643866499 295
153 iso_pu_bacteria 2643221652 2644294144 295
154 iso_pu_bacteria 2643221717 2644646142 295
155 iso_pu_bacteria 8054609563 8054611738 295
156 3300006946 Ga0079104_1002476 Ga0079104_10024763 296
157 3300015261 Ga0182006_1000008 Ga0182006_100000842 296
158 3300015265 Ga0182005_1000022 Ga0182005_100002268 296
159 3300027111 Ga0209281_1002075 Ga0209281_10020753 296
160 3300047470 Ga0495681_0005480 Ga0495681_0005480_477_1451 296
161 3300049459 Ga0495678_000002 Ga0495678_000002_310380_311354 296
162 3300049568 Ga0501031_0069920 Ga0501031_0069920_1164_2153 296
163 3300049569 Ga0501032_0157049 Ga0501032_0157049_252_1241 296
164 3300049570 Ga0501033_0054794 Ga0501033_0054794_948_1937 296
165 3300049572 Ga0501036_0037349 Ga0501036_0037349_1637_2626 296
166 3300049573 Ga0501037_0069605 Ga0501037_0069605_566_1555 296
167 3300049577 Ga0501041_0050525 Ga0501041_0050525_226_1215 296
168 3300049578 Ga0501042_0053992 Ga0501042_0053992_651_1640 296
169 3300049579 Ga0501043_0036325 Ga0501043_0036325_1097_2086 296
170 3300049580 Ga0501046_0030881 Ga0501046_0030881_1034_2023 296
171 3300049582 Ga0501048_0032585 Ga0501048_0032585_1185_2174 296
172 3300049586 Ga0501070_0334128 Ga0501070_0334128_61_1050 296
173 3300049587 Ga0501071_0017081 Ga0501071_0017081_129_1118 296
174 3300049588 Ga0501072_0017696 Ga0501072_0017696_1263_2252 296
175 3300049593 Ga0501077_0046172 Ga0501077_0046172_767_1756 296
176 3300049741 Ga0501079_0086405 Ga0501079_0086405_1031_2020 296
177 3300049742 Ga0501080_0221461 Ga0501080_0221461_616_1605 296
178 3300049743 Ga0501081_0028440 Ga0501081_0028440_1466_2455 296
179 3300049822 Ga0501035_0034595 Ga0501035_0034595_2331_3320 296
180 3300049823 Ga0501044_0142604 Ga0501044_0142604_37_1026 296
181 3300054114 Ga0501084_0041501 Ga0501084_0041501_911_1900 296
182 3300061734 Ga0530510_0176714 Ga0530510_0176714_549_1538 296
183 3300002705 JGI25156J39149_1002760 JGI25156J39149_10027603 298
184 3300002738 JGI25154J39366_1000146 JGI25154J39366_100014619 298
185 3300025206 Ga0209435_100057 Ga0209435_10005746 298
186 3300025246 Ga0209646_1000061 Ga0209646_1000061201 298
187 3300025250 Ga0209026_1000462 Ga0209026_10004629 298
188 3300025256 Ga0209759_1000371 Ga0209759_100037131 298
189 3300042007 Ga0439449_0073307 Ga0439449_0073307_157_1122 298
190 3300003187 JGI25151J46595_10000354 JGI25151J46595_1000035433 299
191 3300003771 Ga0055526_1020906 Ga0055526_10209063 299
192 3300003773 Ga0055537_1012031 Ga0055537_10120312 299
193 3300003775 Ga0055524_1000551 Ga0055524_10005519 299
194 3300025263 Ga0209565_1000160 Ga0209565_100016035 299
195 3300025273 Ga0209673_1018017 Ga0209673_10180173 299
196 3300025291 Ga0209675_1011663 Ga0209675_10116632 299
197 3300025291 Ga0209675_1014179 Ga0209675_10141793 299
198 3300025294 Ga0209025_1000527 Ga0209025_100052735 299
199 3300025294 Ga0209025_1002019 Ga0209025_10020199 299
200 3300025297 Ga0209758_1017123 Ga0209758_10171232 299
201 3300025299 Ga0209256_1000452 Ga0209256_100045223 299
202 3300025299 Ga0209256_1000538 Ga0209256_100053846 299
203 3300025303 Ga0209051_1051029 Ga0209051_10510292 299
204 3300042156 Ga0439446_0009400 Ga0439446_0009400_226_1194 299
205 3300046522 Ga0495643_0122204 Ga0495643_0122204_261_1244 299
206 3300046523 Ga0495644_0022435 Ga0495644_0022435_864_1847 299
207 3300046538 Ga0495609_0000954 Ga0495609_0000954_3870_4853 299
208 3300046810 Ga0495660_0000313 Ga0495660_0000313_7612_8595 299
209 3300053125 Ga0500618_006920 Ga0500618_006920_1764_2741 299
210 iso_pu_bacteria 2945909444 2945910814 299
211 iso_pu_bacteria 2834641062 2834644257 300
212 iso_pu_bacteria 8003400568 8003401966 300
213 3300017792 Ga0163161_10000180 Ga0163161_1000018035 301
214 iso_pu_bacteria 2945984333 2945986947 301
215 3300002774 JGI25150J39212_1001217 JGI25150J39212_10012175 302
216 3300002987 JGI25159J45721_1000033 JGI25159J45721_100003370 302
217 3300003187 JGI25151J46595_10000233 JGI25151J46595_1000023348 302
218 3300003215 JGI25153J46596_10000118 JGI25153J46596_1000011870 302
219 3300003354 JGI25160J50197_1000094 JGI25160J50197_100009419 302
220 3300003374 JGI25161J50226_1000587 JGI25161J50226_10005879 302
221 3300003771 Ga0055526_1000081 Ga0055526_100008167 302
222 3300003773 Ga0055537_1000045 Ga0055537_100004570 302
223 3300003775 Ga0055524_1000135 Ga0055524_100013519 302
224 3300003784 Ga0055534_1000053 Ga0055534_100005371 302
225 3300003790 Ga0055528_1000056 Ga0055528_100005670 302
226 3300003794 Ga0055531_10000797 Ga0055531_1000079717 302
227 3300004625 Ga0055543_1000083 Ga0055543_100008362 302
228 3300005262 Ga0065165_1000322 Ga0065165_100032259 302
229 3300025245 Ga0207425_1000090 Ga0207425_100009069 302
230 3300025258 Ga0209129_1000030 Ga0209129_1000030180 302
231 3300025263 Ga0209565_1000019 Ga0209565_1000019252 302
232 3300025273 Ga0209673_1000095 Ga0209673_1000095171 302
233 3300025284 Ga0209130_1000011 Ga0209130_1000011244 302
234 3300025291 Ga0209675_1000031 Ga0209675_1000031102 302
235 3300025292 Ga0209676_1001314 Ga0209676_100131423 302
236 3300025294 Ga0209025_1000078 Ga0209025_1000078100 302
237 3300025295 Ga0209564_1000056 Ga0209564_1000056167 302
238 3300025297 Ga0209758_1000037 Ga0209758_1000037159 302
239 3300025299 Ga0209256_1000043 Ga0209256_1000043167 302
240 3300025302 Ga0207426_1000029 Ga0207426_1000029159 302
241 3300025302 Ga0207426_1017097 Ga0207426_10170972 302
242 3300025303 Ga0209051_1030905 Ga0209051_10309052 302
243 3300025304 Ga0209257_1000127 Ga0209257_100012769 302
244 iso_pu_bacteria 2945941187 2945943254 303
245 3300000549 LJQas_1000936 LJQas_10009363 307
246 3300031548 Ga0307408_100014244 Ga0307408_1000142442 307
247 3300031548 Ga0307408_100119107 Ga0307408_1001191072 307
248 3300031731 Ga0307405_10037160 Ga0307405_100371602 307
249 3300031824 Ga0307413_10018618 Ga0307413_100186182 307
250 3300031852 Ga0307410_10014288 Ga0307410_100142884 307
251 3300031903 Ga0307407_10001243 Ga0307407_100012435 307
252 3300031911 Ga0307412_10036932 Ga0307412_100369323 307
253 3300031911 Ga0307412_10066954 Ga0307412_100669542 307
254 3300031995 Ga0307409_100014597 Ga0307409_1000145972 307
255 3300032002 Ga0307416_100068216 Ga0307416_1000682162 307
256 3300032005 Ga0307411_10010943 Ga0307411_100109433 307
257 3300032126 Ga0307415_100007067 Ga0307415_1000070674 307
258 iso_pu_bacteria 8054107350 8054112085 307

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

156

348

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tqu-assembly1.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.6554 111 296
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.6483 109 296
7mc0-assembly1.cif.gz_B inward facing conformation of the metni methionine abc transporter 0.643 109 296
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.6321 105 287
3dhw-assembly2.cif.gz_F crystal structure of methionine importer metni 0.6161 109 287
ID Description Score Start End Superfamily
af_Q2G1F7_265_478_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7505 110 290 1.10.3720.10
af_P75798_87_300_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7372 115 296 1.10.3720.10
af_I6YGV9_86_302_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7369 109 296 1.10.3720.10
af_P0DP70_1_121_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7364 174 289 1.10.3720.10
af_P0AFU0_122_352_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7305 110 290 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A2W5BNZ2-F1-model_v4 deleted 0.9186 181 300
AF-A0A7V2JXL6-F1-model_v4 ABC transporter permease 0.892 166 300 GO:0005886
GO:0055085
AF-A0A7W0UGF2-F1-model_v4 ABC transporter permease 0.886 180 302 GO:0005886
GO:0055085
AF-A0A2W5BNZ2-F1-model_v4 deleted 0.8841 181 300
AF-A0A7X6ZAZ3-F1-model_v4 ABC transporter permease 0.8818 177 298 GO:0005886
GO:0071916

Feature Viewer

pLDDT pTM Quality
81.12 0.56 Medium
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Predicted Structure (AlphaFold2)

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