F368452

General Info

Members Datasets Scaffolds Average Seq Length
258 189 514 325

Family's Representative Sequence

Representative Sequence 3300053140|Ga0500573_0013820|Ga0500573_0013820_26_1144
Length 372
Sequence VPGWLRGHEPRVAWPRWYARPEPSENFMRLSLIVPCYNEEAVLARFHEVVRSETAGIAEEIEIVFVDDGSSDGTLEILKKIAAVDPESRYVSFSRNFGKESAMLAGLKRAGGDAVIILDADLQHPPELLSRMVDLHRQGFDQVIAQRDREGDRKLRTLLSRSYYWLINKMVDVKLVDGVGDFRLLSRRAVDALLTMPEYNRFSKGLFAWIGFDSVTFNYRNAAREAGETKWSMRRLLNYGIDSLLSFNNKPLRAAIYLGFLFFSISFFYMVGIVIAAMVHGNNTPGYVTIIAAIVGIGGLQIFTIGVIGEYIGRIYYEAKQRPHYLVKETENGPVRHQTDFRSGDPQETAGGPAGAHPGQVLPGAREVNGIQ

Samples

Sample ID Description Type Environment
1 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
24 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
25 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
37 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
57 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
62 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
75 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
76 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
77 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
87 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
91 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
100 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
101 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
105 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
108 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
109 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
137 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 2501939600 Micromonospora sp. L5 Isolate Unclassified
140 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
141 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
142 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
143 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
144 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
145 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
146 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
147 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
148 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
149 2643221670 Streptomyces sp. Root431 Isolate Unclassified
150 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
151 2643221729 Bacillus sp. Root11 Isolate Unclassified
152 2643221730 Bacillus sp. Root131 Isolate Unclassified
153 2684622632 Bacillus cereus 905 Isolate Unclassified
154 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
155 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
156 2738541358 Bacillus sp. OV752 Isolate Unclassified
157 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
158 2738543006 Bacillus sp. OK077 Isolate Unclassified
159 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
160 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
161 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
162 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
163 2855683550 Micromonospora sp. RP3T Isolate Unclassified
164 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
165 2858868258 Micromonospora sp. MH33 Isolate Unclassified
166 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
167 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
168 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
169 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
170 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
171 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
172 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
173 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
174 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
175 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
176 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
177 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
178 2938917290 Bacillus sp. CR71 Isolate Unclassified
179 2939615513 Lactococcus lactis 1925 Isolate Rhizosphere
180 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
181 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
182 649633069 Micromonospora sp. L5 Isolate Unclassified
183 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
184 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
185 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
186 8023444577 Bacillus sp. BH32 Isolate Unclassified
187 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
188 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
189 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 79.46
Metatranscriptomes 0.39
Isolates 20.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.71
Nodule 0.78
Rhizoplane 4.65
Rhizosphere 75.19
Stem 0
Stem Tuber 0.78
Unclassified 0.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500573_0013820 3300053140 Bacteria 4558
2 JGI24740J21852_10012179 3300001979 Bacteria 3248
3 JGI24740J21852_10019395 3300001979 Bacteria 2395
4 JGI24739J22299_10004530 3300001989 Bacteria 5315
5 JGI24737J22298_10008338 3300001990 Bacteria 3474
6 JGI24735J21928_10017633 3300002067 Bacteria 2207
7 JGI25406J46586_10003993 3300003203 Bacteria 6903
8 Ga0006562J51391_1002366 3300003578 Bacteria 4112
9 Ga0070658_10067954 3300005327 Bacteria 2913
10 Ga0070680_100001882 3300005336 Bacteria 15397
11 Ga0070668_100002515 3300005347 Bacteria 13499
12 Ga0070667_100133089 3300005367 Bacteria 2172
13 Ga0070714_100014242 3300005435 Bacteria 6385
14 Ga0070681_10003117 3300005458 Bacteria 15400
15 Ga0070679_100003007 3300005530 Bacteria 15400
16 Ga0070665_100043554 3300005548 Bacteria 4510
17 Ga0068855_100000171 3300005563 Bacteria 82971
18 Ga0068855_100286052 3300005563 Bacteria 1829
19 Ga0068856_100003784 3300005614 Bacteria 15158
20 Ga0068856_100139212 3300005614 Bacteria 2434
21 Ga0068852_100038377 3300005616 Bacteria 4025
22 Ga0068852_100286787 3300005616 Bacteria 1589
23 Ga0081455_10041671 3300005937 Bacteria 4035
24 Ga0081539_10000109 3300005985 Bacteria 193696
25 Ga0075368_10007009 3300006042 Bacteria 3967
26 Ga0075367_10000502 3300006178 Bacteria 14715
27 Ga0105251_10009344 3300009011 Bacteria 5797
28 Ga0105244_10017385 3300009036 Bacteria 4065
29 Ga0105244_10020313 3300009036 Bacteria 3693
30 Ga0105250_10001234 3300009092 Bacteria 14168
31 Ga0105250_10002251 3300009092 Bacteria 9802
32 Ga0105250_10016635 3300009092 Bacteria 2994
33 Ga0105240_10012095 3300009093 Bacteria 11957
34 Ga0105240_10024018 3300009093 Bacteria 8052
35 Ga0105240_10364301 3300009093 Bacteria 1636
36 Ga0105241_10002397 3300009174 Bacteria 14077
37 Ga0105241_10171340 3300009174 Bacteria 1793
38 Ga0105237_10365976 3300009545 Bacteria 1446
39 Ga0105238_10008119 3300009551 Bacteria 10496
40 Ga0105238_10240103 3300009551 Bacteria 1789
41 Ga0105246_10017485 3300011119 Bacteria 4557
42 Ga0105246_10212165 3300011119 Bacteria 1512
43 Ga0157370_10260537 3300013104 Bacteria 1603
44 Ga0157374_10010766 3300013296 Bacteria 7884
45 Ga0157372_10096768 3300013307 Bacteria 3365
46 Ga0157372_10138137 3300013307 Bacteria 2807
47 Ga0157375_10138859 3300013308 Bacteria 2556
48 Ga0182008_10040023 3300014497 Bacteria 2341
49 Ga0182007_10014578 3300015262 Bacteria 2959
50 Ga0182007_10052368 3300015262 Unclassified 1345
51 Ga0207696_1003622 3300025711 Bacteria 6958
52 Ga0207696_1017124 3300025711 Bacteria 2407
53 Ga0207655_1031182 3300025728 Bacteria 2462
54 Ga0207647_10003999 3300025904 Bacteria 10992
55 Ga0207647_10005183 3300025904 Bacteria 9591
56 Ga0207647_10028882 3300025904 Bacteria 3596
57 Ga0207705_10052736 3300025909 Bacteria 2929
58 Ga0207707_10002020 3300025912 Bacteria 18420
59 Ga0207695_10001520 3300025913 Bacteria 38493
60 Ga0207695_10073985 3300025913 Bacteria 3469
61 Ga0207695_10275952 3300025913 Bacteria 1575
62 Ga0207671_10000879 3300025914 Bacteria 38034
63 Ga0207660_10001242 3300025917 Bacteria 17071
64 Ga0207652_10002184 3300025921 Bacteria 16717
65 Ga0207694_10004000 3300025924 Bacteria 11615
66 Ga0207664_10006472 3300025929 Bacteria 8059
67 Ga0207667_10015885 3300025949 Bacteria 8526
68 Ga0207667_10253047 3300025949 Bacteria 1802
69 Ga0207668_10125105 3300025972 Bacteria 1953
70 Ga0207702_10000957 3300026078 Bacteria 29691
71 Ga0207702_10113057 3300026078 Bacteria 2418
72 Ga0207674_10184949 3300026116 Bacteria 2034
73 Ga0207698_10038876 3300026142 Bacteria 3520
74 Ga0207698_10195635 3300026142 Bacteria 1806
75 Ga0209813_10008375 3300027866 Bacteria 2610
76 Ga0268266_10036572 3300028379 Bacteria 4180
77 Ga0265318_10000062 3300028577 Bacteria 107081
78 Ga0237817_10027 3300030083 Bacteria 56757
79 Ga0265340_10005511 3300031247 Bacteria 7019
80 Ga0307513_10092859 3300031456 Bacteria 3070
81 Ga0307513_10212014 3300031456 Bacteria 1767
82 Ga0307516_10082043 3300031730 Bacteria 3066
83 Ga0307411_10003707 3300032005 Bacteria 7159
84 Ga0307507_10034921 3300033179 Bacteria 5178
85 Ga0373962_0004722 3300035242 Bacteria 3287
86 Ga0395900_0139413 3300037418 Bacteria 2484
87 Ga0395900_0149476 3300037418 Bacteria 2387
88 Ga0395898_0001847 3300037466 Bacteria 27221
89 Ga0395898_0141397 3300037466 Bacteria 2304
90 Ga0395898_0379642 3300037466 Bacteria 1348
91 Ga0395905_0258825 3300037471 Bacteria 1625
92 Ga0395901_0055893 3300038443 Bacteria 4106
93 Ga0237819_00023 3300038705 Bacteria 52093
94 Ga0466969_0008558 3300044656 Bacteria 5429
95 Ga0466969_0018732 3300044656 Bacteria 3604
96 Ga0466969_0077511 3300044656 Bacteria 1590
97 Ga0466972_0013349 3300044658 Bacteria 4124
98 Ga0466965_0006224 3300044683 Bacteria 5400
99 Ga0466966_0002524 3300044684 Bacteria 11996
100 Ga0466966_0100899 3300044684 Bacteria 1785
101 Ga0466966_0136885 3300044684 Bacteria 1497
102 Ga0466966_0169824 3300044684 Bacteria 1326
103 Ga0466961_0002646 3300044693 Bacteria 11118
104 Ga0466963_0000272 3300044694 Bacteria 22996
105 Ga0466963_0000738 3300044694 Bacteria 16109
106 Ga0466963_0070922 3300044694 Bacteria 2344
107 Ga0466963_0263143 3300044694 Bacteria 1211
108 Ga0466964_0007302 3300044706 Bacteria 4133
109 Ga0466964_0101101 3300044706 Bacteria 1271
110 Ga0466971_0000927 3300044719 Bacteria 12042
111 Ga0466971_0024823 3300044719 Bacteria 2675
112 Ga0466971_0133570 3300044719 Bacteria 1153
113 Ga0466968_0054616 3300044735 Bacteria 1713
114 Ga0466970_0001187 3300044765 Bacteria 12650
115 Ga0466970_0003821 3300044765 Bacteria 7374
116 Ga0466970_0019928 3300044765 Bacteria 3480
117 Ga0466957_0000283 3300044842 Bacteria 24756
118 Ga0466959_0001395 3300045049 Bacteria 14784
119 Ga0466958_0000165 3300045836 Bacteria 23507
120 Ga0466967_0000386 3300045976 Bacteria 20600
121 Ga0466967_0003609 3300045976 Bacteria 10159
122 Ga0466967_0018269 3300045976 Bacteria 5598
123 Ga0495592_0006002 3300046454 Bacteria 9028
124 Ga0495603_0001316 3300046455 Bacteria 14401
125 Ga0495603_0004444 3300046455 Bacteria 8361
126 Ga0495629_0002259 3300046459 Bacteria 14851
127 Ga0495629_0003187 3300046459 Bacteria 12425
128 Ga0495629_0026565 3300046459 Bacteria 4112
129 Ga0495651_0005278 3300046462 Bacteria 9850
130 Ga0495664_0121278 3300046477 Bacteria 1581
131 Ga0495594_0000955 3300046499 Bacteria 15021
132 Ga0495618_0061540 3300046514 Bacteria 2381
133 Ga0495628_0052145 3300046516 Bacteria 3232
134 Ga0495666_0090738 3300046526 Bacteria 1442
135 Ga0495652_0001773 3300046529 Bacteria 23078
136 Ga0495652_0021144 3300046529 Bacteria 5785
137 Ga0495652_0230613 3300046529 Bacteria 1385
138 Ga0495640_0035604 3300046533 Bacteria 3522
139 Ga0495645_0025423 3300046543 Bacteria 4297
140 Ga0495622_0006116 3300046557 Bacteria 5593
141 Ga0495634_0027224 3300046642 Bacteria 3978
142 Ga0495588_0032200 3300046674 Bacteria 2641
143 Ga0495657_0068212 3300046675 Bacteria 2331
144 Ga0495613_0014712 3300046689 Bacteria 5807
145 Ga0495649_0042286 3300046694 Bacteria 2490
146 Ga0495589_0086346 3300046794 Bacteria 1524
147 Ga0495600_0004306 3300046809 Bacteria 8516
148 Ga0495600_0083383 3300046809 Bacteria 2086
149 Ga0495604_0013699 3300047317 Bacteria 6464
150 Ga0495604_0051056 3300047317 Bacteria 3208
151 Ga0495604_0060000 3300047317 Bacteria 2914
152 Ga0495676_0001362 3300047321 Bacteria 21019
153 Ga0495676_0011600 3300047321 Bacteria 7951
154 Ga0495676_0082985 3300047321 Bacteria 2423
155 Ga0495687_006506 3300047443 Bacteria 7142
156 Ga0495675_0090812 3300047444 Bacteria 1917
157 Ga0495686_0066532 3300047472 Bacteria 2227
158 Ga0495593_0104393 3300047673 Bacteria 1451
159 Ga0495614_0000839 3300048089 Bacteria 13000
160 Ga0496100_0028876 3300048903 Bacteria 3425
161 Ga0496101_0000418 3300048904 Bacteria 27414
162 Ga0496101_0153681 3300048904 Bacteria 1761
163 Ga0496102_0404314 3300048905 Bacteria 1283
164 Ga0496103_0030982 3300048906 Bacteria 3256
165 Ga0496104_0194299 3300048907 Bacteria 1941
166 Ga0496105_0001746 3300048908 Bacteria 15539
167 Ga0496105_0428879 3300048908 Bacteria 1046
168 Ga0496106_0016554 3300048909 Bacteria 5455
169 Ga0496110_0001295 3300048913 Bacteria 17956
170 Ga0496113_0007342 3300048916 Bacteria 7080
171 Ga0496114_0054359 3300048917 Bacteria 3339
172 Ga0496117_0000060 3300048920 Bacteria 258500
173 Ga0496122_0118591 3300048925 Bacteria 1714
174 Ga0501031_0073545 3300049568 Bacteria 2225
175 Ga0501032_0009851 3300049569 Bacteria 6913
176 Ga0501033_0006866 3300049570 Bacteria 8888
177 Ga0501033_0007773 3300049570 Bacteria 8309
178 Ga0501033_0008855 3300049570 Bacteria 7774
179 Ga0501034_0025901 3300049571 Bacteria 5973
180 Ga0501034_0192602 3300049571 Bacteria 2000
181 Ga0501037_0001524 3300049573 Bacteria 16898
182 Ga0501038_0023832 3300049574 Bacteria 5465
183 Ga0501038_0171244 3300049574 Bacteria 1758
184 Ga0501038_0197272 3300049574 Bacteria 1617
185 Ga0501039_0015225 3300049575 Bacteria 5886
186 Ga0501043_0010947 3300049579 Bacteria 7105
187 Ga0501043_0030406 3300049579 Bacteria 4244
188 Ga0501043_0154028 3300049579 Bacteria 1798
189 Ga0501047_0201405 3300049581 Unclassified 1852
190 Ga0501047_0252850 3300049581 Bacteria 1610
191 Ga0501047_0273644 3300049581 Bacteria 1534
192 Ga0501048_0006681 3300049582 Bacteria 8761
193 Ga0501070_0000925 3300049586 Bacteria 26486
194 Ga0501083_0120875 3300049744 Bacteria 1718
195 Ga0501035_0031917 3300049822 Bacteria 4796
196 Ga0501035_0230314 3300049822 Bacteria 1579
197 Ga0501044_0065930 3300049823 Bacteria 3692
198 Ga0501044_0099113 3300049823 Bacteria 2933
199 Ga0501044_0260623 3300049823 Bacteria 1672
200 nmdc:mga06z11_631_c2 3300050494 Bacteria 8295
201 nmdc:mga04h51_9818_c1 3300050495 Bacteria 2610
202 Ga0500559_0010621 3300053136 Bacteria 3948
203 Ga0466962_0000971 3300061719 Bacteria 13051
204 Ga0466962_0010724 3300061719 Bacteria 4405
205 Ga0466962_0010987 3300061719 Bacteria 4358
206 2501941091 2501939600 Bacteria 6907073
207 2515494329 2515154088 Bacteria 5526283
208 2515757416 2515154137 Bacteria 5711575
209 2516088895 2515154203 Bacteria 5458536
210 2553391327 2551306519 Bacteria 5465154
211 2554260178 2554235005 Bacteria 6457341
212 2585300206 2582581312 Bacteria 7308206
213 2585319374 2582581314 Bacteria 11452267
214 2616904956 2616644941 Bacteria 8510691
215 2643948178 2643221587 Bacteria 7586415
216 2644388872 2643221670 Bacteria 6497041
217 2644429651 2643221677 Bacteria 7584031
218 2644702551 2643221729 Bacteria 6621700
219 2644715181 2643221730 Bacteria 6523787
220 2685153389 2684622632 Bacteria 5380049
221 2698319797 2695420987 Bacteria 6152737
222 2721508549 2718218445 Bacteria 5113413
223 2739156809 2738541358 Bacteria 5932299
224 2739206422 2738543005 Bacteria 5278128
225 2739209441 2738543006 Bacteria 5904091
226 2808918486 2808606375 Bacteria 9466072
227 2811842683 2808606982 Bacteria 7791042
228 2819583729 2818991443 Bacteria 6598732
229 2832004942 2832004796 Bacteria 6538017
230 2855689769 2855683550 Bacteria 7134265
231 2856861618 2856858025 Bacteria 7255264
232 2858869082 2858868258 Bacteria 7683772
233 2858904280 2858902515 Bacteria 7086037
234 2862390887 2862382967 Bacteria 10317375
235 2866067641 2866065130 Bacteria 6518152
236 2899373829 2899370129 Bacteria 6781179
237 2899374120 2899370129 Bacteria 6781179
238 2912718897 2912715099 Bacteria 9460473
239 2912726013 2912723979 Bacteria 8557534
240 2918504279 2918501144 Bacteria 8668083
241 2919523375 2919517244 Bacteria 5858162
242 2928147075 2928142448 Bacteria 5288925
243 2929222607 2929219909 Bacteria 6984360
244 2929239100 2929233124 Bacteria 5948380
245 2936362763 2936361878 Bacteria 5632809
246 2938923324 2938917290 Bacteria 5914775
247 2939616607 2939615513 Bacteria 2384962
248 2974319680 2974315732 Bacteria 4602776
249 3006990924 3006988479 Bacteria 4767936
250 649812222 649633069 Bacteria 6962533
251 8008560586 8008558824 Bacteria 10610750
252 8008580661 8008574985 Bacteria 7815457
253 8022626920 8022621104 Bacteria 5241040
254 8023449094 8023444577 Bacteria 5661597
255 8023630271 8023623736 Bacteria 8593882
256 8025536691 8025530807 Bacteria 8495698
257 8047717638 8047710418 Bacteria 11023148
258 Ga0500573_0013820
259 JGI24740J21852_10012179
260 JGI24740J21852_10019395
261 JGI24739J22299_10004530
262 JGI24737J22298_10008338
263 JGI24735J21928_10017633
264 JGI25406J46586_10003993
265 Ga0006562J51391_1002366
266 Ga0070658_10067954
267 Ga0070680_100001882
268 Ga0070668_100002515
269 Ga0070667_100133089
270 Ga0070714_100014242
271 Ga0070681_10003117
272 Ga0070679_100003007
273 Ga0070665_100043554
274 Ga0068855_100000171
275 Ga0068855_100286052
276 Ga0068856_100003784
277 Ga0068856_100139212
278 Ga0068852_100038377
279 Ga0068852_100286787
280 Ga0081455_10041671
281 Ga0081539_10000109
282 Ga0075368_10007009
283 Ga0075367_10000502
284 Ga0105251_10009344
285 Ga0105244_10017385
286 Ga0105244_10020313
287 Ga0105250_10001234
288 Ga0105250_10002251
289 Ga0105250_10016635
290 Ga0105240_10012095
291 Ga0105240_10024018
292 Ga0105240_10364301
293 Ga0105241_10002397
294 Ga0105241_10171340
295 Ga0105237_10365976
296 Ga0105238_10008119
297 Ga0105238_10240103
298 Ga0105246_10017485
299 Ga0105246_10212165
300 Ga0157370_10260537
301 Ga0157374_10010766
302 Ga0157372_10096768
303 Ga0157372_10138137
304 Ga0157375_10138859
305 Ga0182008_10040023
306 Ga0182007_10014578
307 Ga0182007_10052368
308 Ga0207696_1003622
309 Ga0207696_1017124
310 Ga0207655_1031182
311 Ga0207647_10003999
312 Ga0207647_10005183
313 Ga0207647_10028882
314 Ga0207705_10052736
315 Ga0207707_10002020
316 Ga0207695_10001520
317 Ga0207695_10073985
318 Ga0207695_10275952
319 Ga0207671_10000879
320 Ga0207660_10001242
321 Ga0207652_10002184
322 Ga0207694_10004000
323 Ga0207664_10006472
324 Ga0207667_10015885
325 Ga0207667_10253047
326 Ga0207668_10125105
327 Ga0207702_10000957
328 Ga0207702_10113057
329 Ga0207674_10184949
330 Ga0207698_10038876
331 Ga0207698_10195635
332 Ga0209813_10008375
333 Ga0268266_10036572
334 Ga0265318_10000062
335 Ga0237817_10027
336 Ga0265340_10005511
337 Ga0307513_10092859
338 Ga0307513_10212014
339 Ga0307516_10082043
340 Ga0307411_10003707
341 Ga0307507_10034921
342 Ga0373962_0004722
343 Ga0395900_0139413
344 Ga0395900_0149476
345 Ga0395898_0001847
346 Ga0395898_0141397
347 Ga0395898_0379642
348 Ga0395905_0258825
349 Ga0395901_0055893
350 Ga0237819_00023
351 Ga0466969_0008558
352 Ga0466969_0018732
353 Ga0466969_0077511
354 Ga0466972_0013349
355 Ga0466965_0006224
356 Ga0466966_0002524
357 Ga0466966_0100899
358 Ga0466966_0136885
359 Ga0466966_0169824
360 Ga0466961_0002646
361 Ga0466963_0000272
362 Ga0466963_0000738
363 Ga0466963_0070922
364 Ga0466963_0263143
365 Ga0466964_0007302
366 Ga0466964_0101101
367 Ga0466971_0000927
368 Ga0466971_0024823
369 Ga0466971_0133570
370 Ga0466968_0054616
371 Ga0466970_0001187
372 Ga0466970_0003821
373 Ga0466970_0019928
374 Ga0466957_0000283
375 Ga0466959_0001395
376 Ga0466958_0000165
377 Ga0466967_0000386
378 Ga0466967_0003609
379 Ga0466967_0018269
380 Ga0495592_0006002
381 Ga0495603_0001316
382 Ga0495603_0004444
383 Ga0495629_0002259
384 Ga0495629_0003187
385 Ga0495629_0026565
386 Ga0495651_0005278
387 Ga0495664_0121278
388 Ga0495594_0000955
389 Ga0495618_0061540
390 Ga0495628_0052145
391 Ga0495666_0090738
392 Ga0495652_0001773
393 Ga0495652_0021144
394 Ga0495652_0230613
395 Ga0495640_0035604
396 Ga0495645_0025423
397 Ga0495622_0006116
398 Ga0495634_0027224
399 Ga0495588_0032200
400 Ga0495657_0068212
401 Ga0495613_0014712
402 Ga0495649_0042286
403 Ga0495589_0086346
404 Ga0495600_0004306
405 Ga0495600_0083383
406 Ga0495604_0013699
407 Ga0495604_0051056
408 Ga0495604_0060000
409 Ga0495676_0001362
410 Ga0495676_0011600
411 Ga0495676_0082985
412 Ga0495687_006506
413 Ga0495675_0090812
414 Ga0495686_0066532
415 Ga0495593_0104393
416 Ga0495614_0000839
417 Ga0496100_0028876
418 Ga0496101_0000418
419 Ga0496101_0153681
420 Ga0496102_0404314
421 Ga0496103_0030982
422 Ga0496104_0194299
423 Ga0496105_0001746
424 Ga0496105_0428879
425 Ga0496106_0016554
426 Ga0496110_0001295
427 Ga0496113_0007342
428 Ga0496114_0054359
429 Ga0496117_0000060
430 Ga0496122_0118591
431 Ga0501031_0073545
432 Ga0501032_0009851
433 Ga0501033_0006866
434 Ga0501033_0007773
435 Ga0501033_0008855
436 Ga0501034_0025901
437 Ga0501034_0192602
438 Ga0501037_0001524
439 Ga0501038_0023832
440 Ga0501038_0171244
441 Ga0501038_0197272
442 Ga0501039_0015225
443 Ga0501043_0010947
444 Ga0501043_0030406
445 Ga0501043_0154028
446 Ga0501047_0201405
447 Ga0501047_0252850
448 Ga0501047_0273644
449 Ga0501048_0006681
450 Ga0501070_0000925
451 Ga0501083_0120875
452 Ga0501035_0031917
453 Ga0501035_0230314
454 Ga0501044_0065930
455 Ga0501044_0099113
456 Ga0501044_0260623
457 nmdc:mga06z11_631_c2
458 nmdc:mga04h51_9818_c1
459 Ga0500559_0010621
460 Ga0466962_0000971
461 Ga0466962_0010724
462 Ga0466962_0010987
463 2501941091
464 2515494329
465 2515757416
466 2516088895
467 2553391327
468 2554260178
469 2585300206
470 2585319374
471 2616904956
472 2643948178
473 2644388872
474 2644429651
475 2644702551
476 2644715181
477 2685153389
478 2698319797
479 2721508549
480 2739156809
481 2739206422
482 2739209441
483 2808918486
484 2811842683
485 2819583729
486 2832004942
487 2855689769
488 2856861618
489 2858869082
490 2858904280
491 2862390887
492 2866067641
493 2899373829
494 2899374120
495 2912718897
496 2912726013
497 2918504279
498 2919523375
499 2928147075
500 2929222607
501 2929239100
502 2936362763
503 2938923324
504 2939616607
505 2974319680
506 3006990924
507 649812222
508 8008560586
509 8008580661
510 8022626920
511 8023449094
512 8023630271
513 8025536691
514 8047717638

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

31

194

0.96

PF10111

Glyco_tranf_2_2

Glycosyltransferase like family 2

31

145

0.87

PF13641

Glyco_tranf_2_3

Glycosyltransferase like family 2

28

193

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ekp-assembly1.cif.gz_A structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (wt) 0.8281 1 304
5eke-assembly1.cif.gz_A structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (f215a mutant) 0.8202 1 304
5eke-assembly1.cif.gz_C structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (f215a mutant) 0.8111 1 304
5ekp-assembly1.cif.gz_B structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (wt) 0.8097 1 304
5ekp-assembly1.cif.gz_C structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (wt) 0.8097 1 304
ID Description Score Start End Superfamily
af_Q2G2T7_1_208_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9208 1 206 3.90.550.10
af_P9WMX5_1_216_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9182 1 217 3.90.550.10
af_P77293_1_188_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9181 1 186 3.90.550.10
af_P9WMX5_1_216_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9101 1 217 3.90.550.10
af_Q2G2T7_1_208_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9079 1 206 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A7C5FNM4-F1-model_v4 Glycosyltransferase 0.9882 2 109 GO:0005886
GO:0016757
AF-A0A7C4KIH1-F1-model_v4 Glycosyltransferase 0.9859 3 114 GO:0005886
GO:0016757
AF-W2D0Y6-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.9817 2 114 GO:0005886
GO:0016757
AF-A0A4V1ZS11-F1-model_v4 Glycosyltransferase family 2 protein 0.9786 3 102 GO:0005886
GO:0099621
AF-A0A535P081-F1-model_v4 Glycosyltransferase 0.9745 2 100 GO:0005886
GO:0099621

Map