F368451

General Info

Members Datasets Scaffolds Average Seq Length
258 200 231 472

Family's Representative Sequence

Representative Sequence 3300053136|Ga0500559_0041611|Ga0500559_0041611_61_1644
Length 527
Sequence VTIGQHPTPSVVTHTAGVFLLTTAMRRWWPNDARTGRGNATRLANEMEKEPTTVFNSPDEVLGFIRDEDVKFIDVRFSDLPGIMQHFTVPAQSWDADAIEGGVAFDGSSVRGFQAIHESDMLLLPDLATARVDAFRAEKTLIINHFVHDPVTREPYSRDPRNIARKAEQYINESGVADLAYFGPEAEFYMFDSVRFDTTENASFHEIDSESGWWNTGADEAGGNLGYKVKYKGGYFPVSPTDHYADLRDRIVLNLISAGFTVERAHHEVGTAGQAEINYRFNTLLHAADDLQLFKYIVKNTAWAAGKTATFMPKPLFGDNGSGMHTHQSLWKDGAPLFYDESGYAGLSDTARHYIGGILHHAPSLLAFTNPTVNSYHRLVPGFEAPVSLVYSQRNRSACVRIPITGSNAKAKRIEFRCPDSSGNPYLAFSAMLMAGLDGIKNKIEPPTPVDKDLYELPPEEAKEVNHVPGSLPEVLDNLESDHDFLLEGGVFTPDVISTWIALKRDSEIDPLRLRPHPYEFALYYDV

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2643221613 Oerskovia sp. Root22 Isolate Unclassified
3 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
4 2643221711 Terrabacter sp. Root85 Isolate Unclassified
5 2643221721 Oerskovia sp. Root918 Isolate Unclassified
6 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
7 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
8 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
9 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
10 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
11 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
12 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
13 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
14 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
15 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
16 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
17 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
18 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
19 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
20 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
21 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
22 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
23 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
24 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
25 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
26 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
27 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
28 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
29 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
30 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
31 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
32 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
34 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
35 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
36 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
37 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
38 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
48 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
73 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
91 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
92 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
93 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
94 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
98 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
102 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
110 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
111 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
124 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
127 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
128 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
129 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
130 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
135 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
136 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
137 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
138 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
141 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
142 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
143 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
144 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
145 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
159 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
163 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
164 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
177 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
180 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
181 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
182 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
183 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
188 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
192 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
193 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
194 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
195 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
196 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
197 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
198 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
199 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
200 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.5
Metatranscriptomes 5.04
Isolates 10.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.94
Nodule 0
Rhizoplane 6.2
Rhizosphere 82.17
Stem 0
Stem Tuber 0
Unclassified 9.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1003950 3300000549 Bacteria 1955
2 JGI24739J22299_10013999 3300001989 Bacteria 2921
3 JGI24739J22299_10025312 3300001989 Bacteria 2087
4 JGI24737J22298_10006828 3300001990 Bacteria 3878
5 JGI24737J22298_10011685 3300001990 Bacteria 2873
6 JGI24735J21928_10028460 3300002067 Bacteria 1668
7 JGI25152J39213_1000004 3300002773 Bacteria 191383
8 JGI25406J46586_10017444 3300003203 Bacteria 2968
9 Ga0006562J51391_1030144 3300003578 Bacteria 1581
10 Ga0070668_100064414 3300005347 Bacteria 2842
11 Ga0070714_100008321 3300005435 Bacteria 8094
12 Ga0070710_10001080 3300005437 Bacteria 12905
13 Ga0070662_100131854 3300005457 Bacteria 1928
14 Ga0070707_100023849 3300005468 Bacteria 5788
15 Ga0068855_100173552 3300005563 Bacteria 2440
16 Ga0068857_100140740 3300005577 Bacteria 2181
17 Ga0068852_100057570 3300005616 Bacteria 3364
18 Ga0068861_100010603 3300005719 Bacteria 6398
19 Ga0081455_10004084 3300005937 Bacteria 16523
20 Ga0081455_10036296 3300005937 Bacteria 4391
21 Ga0081455_10110284 3300005937 Bacteria 2188
22 Ga0081455_10140533 3300005937 Bacteria 1876
23 Ga0081538_10000025 3300005981 Bacteria 129366
24 Ga0081539_10000085 3300005985 Bacteria 217816
25 Ga0075364_10001747 3300006051 Bacteria 11983
26 Ga0075432_10000964 3300006058 Bacteria 9116
27 Ga0075432_10005778 3300006058 Bacteria 4209
28 Ga0075427_10006755 3300006194 Bacteria 1672
29 Ga0075428_100019851 3300006844 Bacteria 7439
30 Ga0075428_100081832 3300006844 Bacteria 3523
31 Ga0075430_100007049 3300006846 Bacteria 9479
32 Ga0075431_100002552 3300006847 Bacteria 17581
33 Ga0075431_100042234 3300006847 Bacteria 4702
34 Ga0075433_10000510 3300006852 Bacteria 25335
35 Ga0075433_10011478 3300006852 Bacteria 7133
36 Ga0075434_100000935 3300006871 Bacteria 23462
37 Ga0075434_100012079 3300006871 Bacteria 8176
38 Ga0075429_100018989 3300006880 Bacteria 5955
39 Ga0075429_100171079 3300006880 Bacteria 1903
40 Ga0075436_100000805 3300006914 Bacteria 20821
41 Ga0075435_100002900 3300007076 Bacteria 11514
42 Ga0075435_100018305 3300007076 Bacteria 5324
43 Ga0111539_10006590 3300009094 Bacteria 14963
44 Ga0114129_10004382 3300009147 Bacteria 19907
45 Ga0114129_10017120 3300009147 Bacteria 10322
46 Ga0114129_10035809 3300009147 Bacteria 7010
47 Ga0114129_10406630 3300009147 Bacteria 1793
48 Ga0105243_10021700 3300009148 Bacteria 4875
49 Ga0105243_10031022 3300009148 Bacteria 4120
50 Ga0105242_10007551 3300009176 Bacteria 8368
51 Ga0105238_10045984 3300009551 Bacteria 4408
52 Ga0105238_10149839 3300009551 Bacteria 2308
53 Ga0105249_10104071 3300009553 Bacteria 2674
54 Ga0105249_10114232 3300009553 Bacteria 2556
55 Ga0157370_10003107 3300013104 Bacteria 19657
56 Ga0157369_10018329 3300013105 Bacteria 7849
57 Ga0157378_10023640 3300013297 Bacteria 5406
58 Ga0157372_10017288 3300013307 Bacteria 7743
59 Ga0157372_10066395 3300013307 Bacteria 4053
60 Ga0197907_10301849 3300020069 Bacteria 1776
61 Ga0206351_10726834 3300020077 Bacteria 1689
62 Ga0206352_11345653 3300020078 Bacteria 1754
63 Ga0206350_11103853 3300020080 Bacteria 1537
64 Ga0154015_1286325 3300020610 Bacteria 1728
65 Ga0213875_10000060 3300021388 Bacteria 135020
66 Ga0213875_10002210 3300021388 Bacteria 11845
67 Ga0224712_10025790 3300022467 Bacteria 2070
68 Ga0207692_10015456 3300025898 Bacteria 3359
69 Ga0207684_10047665 3300025910 Bacteria 3634
70 Ga0207695_10023188 3300025913 Bacteria 7022
71 Ga0207695_10102955 3300025913 Bacteria 2847
72 Ga0207652_10221368 3300025921 Bacteria 1705
73 Ga0207646_10016173 3300025922 Bacteria 7011
74 Ga0207700_10093347 3300025928 Bacteria 2381
75 Ga0207664_10001481 3300025929 Bacteria 15400
76 Ga0207664_10065518 3300025929 Bacteria 2909
77 Ga0207664_10071332 3300025929 Bacteria 2798
78 Ga0207706_10040607 3300025933 Bacteria 4124
79 Ga0207686_10127815 3300025934 Bacteria 1739
80 Ga0207709_10045257 3300025935 Bacteria 2664
81 Ga0207661_10048211 3300025944 Bacteria 3384
82 Ga0207667_10075969 3300025949 Bacteria 3487
83 Ga0207668_10006203 3300025972 Bacteria 7058
84 Ga0207702_10054579 3300026078 Bacteria 3386
85 Ga0207675_100004165 3300026118 Bacteria 13997
86 Ga0207428_10000586 3300027907 Bacteria 43007
87 Ga0207428_10013611 3300027907 Bacteria 7097
88 Ga0307511_10003120 3300030521 Bacteria 17081
89 Ga0307512_10079582 3300030522 Bacteria 2366
90 Ga0316177_1027911 3300030731 Bacteria 2461
91 Ga0316176_1098856 3300030732 Bacteria 3935
92 Ga0314311_1033288 3300030733 Bacteria 8855
93 Ga0307509_10219416 3300031507 Bacteria 1717
94 Ga0307408_100115840 3300031548 Bacteria 2067
95 Ga0316579_10009979 3300031691 Bacteria 4003
96 Ga0316576_10000124 3300031727 Bacteria 29116
97 Ga0316576_10002976 3300031727 Bacteria 9828
98 Ga0316576_10017913 3300031727 Bacteria 4825
99 Ga0316576_10074020 3300031727 Bacteria 2517
100 Ga0316576_10128864 3300031727 Bacteria 1903
101 Ga0316578_10065148 3300031728 Bacteria 2151
102 Ga0307405_10034655 3300031731 Bacteria 3006
103 Ga0316577_10004924 3300031733 Bacteria 6955
104 Ga0316577_10093595 3300031733 Bacteria 1682
105 Ga0307413_10016240 3300031824 Bacteria 3840
106 Ga0307410_10010372 3300031852 Bacteria 5273
107 Ga0307410_10097179 3300031852 Bacteria 2103
108 Ga0307406_10011408 3300031901 Bacteria 5042
109 Ga0307412_10053220 3300031911 Bacteria 2683
110 Ga0307409_100000379 3300031995 Bacteria 18847
111 Ga0307409_100205140 3300031995 Bacteria 1767
112 Ga0307416_100000521 3300032002 Bacteria 19599
113 Ga0307416_100069518 3300032002 Bacteria 2914
114 Ga0307416_100133753 3300032002 Bacteria 2238
115 Ga0307416_100202647 3300032002 Bacteria 1884
116 Ga0307415_100003308 3300032126 Bacteria 8179
117 Ga0316583_10021720 3300032133 Bacteria 2300
118 Ga0307507_10000011 3300033179 Bacteria 261849
119 Ga0307507_10012011 3300033179 Bacteria 10797
120 Ga0316588_1015676 3300033528 Bacteria 1672
121 Ga0316587_1006556 3300033529 Bacteria 1782
122 Ga0373956_0001135 3300035119 Bacteria 11000
123 Ga0316574_0059816 3300035398 Bacteria 2390
124 Ga0373935_0000546 3300035692 Bacteria 19533
125 Ga0373927_0033817 3300035695 Bacteria 3327
126 Ga0373933_0122767 3300035724 Bacteria 1628
127 Ga0373947_0000001 3300035725 Bacteria 510932
128 Ga0316584_0002093 3300036712 Bacteria 12496
129 Ga0316584_0023329 3300036712 Bacteria 4520
130 Ga0316584_0031538 3300036712 Bacteria 3919
131 Ga0395899_0178533 3300037312 Bacteria 1492
132 Ga0395900_0078851 3300037418 Bacteria 3384
133 Ga0395900_0114480 3300037418 Bacteria 2768
134 Ga0395898_0044251 3300037466 Bacteria 4384
135 Ga0316581_0001105 3300037588 Bacteria 5859
136 Ga0436364_0061454 3300037853 Bacteria 95434
137 Ga0395901_0002330 3300038443 Bacteria 19348
138 Ga0395901_0009202 3300038443 Bacteria 10006
139 Ga0237816_00185 3300039145 Bacteria 5075
140 Ga0439463_002889 3300042016 Bacteria 4356
141 Ga0439464_0006954 3300042439 Bacteria 2954
142 Ga0466969_0004578 3300044656 Bacteria 7364
143 Ga0466969_0004865 3300044656 Bacteria 7153
144 Ga0466965_0001705 3300044683 Bacteria 9023
145 Ga0466966_0000648 3300044684 Bacteria 22118
146 Ga0466961_0003938 3300044693 Bacteria 9282
147 Ga0466961_0044216 3300044693 Bacteria 2850
148 Ga0466961_0138257 3300044693 Bacteria 1526
149 Ga0466963_0000943 3300044694 Bacteria 14883
150 Ga0466971_0000330 3300044719 Bacteria 18124
151 Ga0466968_0000065 3300044735 Bacteria 31445
152 Ga0466970_0028642 3300044765 Bacteria 2928
153 Ga0466970_0095124 3300044765 Bacteria 1619
154 Ga0466957_0000830 3300044842 Bacteria 15775
155 Ga0466960_0001081 3300044901 Bacteria 9785
156 Ga0466959_0013455 3300045049 Bacteria 5930
157 Ga0466959_0037191 3300045049 Bacteria 3596
158 Ga0466959_0038654 3300045049 Bacteria 3526
159 Ga0466958_0000068 3300045836 Bacteria 30629
160 Ga0466967_0016707 3300045976 Bacteria 5798
161 Ga0495650_0025309 3300046471 Bacteria 2785
162 Ga0495620_0042598 3300046515 Bacteria 1982
163 Ga0495667_0061392 3300046559 Bacteria 2464
164 Ga0495667_0125377 3300046559 Bacteria 1657
165 Ga0495669_0032648 3300046684 Bacteria 2289
166 Ga0495680_0191546 3300047322 Bacteria 1471
167 Ga0496101_0048426 3300048904 Bacteria 3055
168 Ga0496101_0154593 3300048904 Bacteria 1756
169 Ga0496102_0011942 3300048905 Bacteria 7500
170 Ga0496102_0033554 3300048905 Bacteria 4612
171 Ga0496103_0009709 3300048906 Bacteria 5696
172 Ga0496106_0002080 3300048909 Bacteria 14999
173 Ga0496106_0136606 3300048909 Bacteria 1926
174 Ga0496107_0103837 3300048910 Bacteria 2085
175 Ga0496108_0019796 3300048911 Bacteria 5529
176 Ga0496109_0029437 3300048912 Bacteria 4918
177 Ga0496109_0049603 3300048912 Bacteria 3822
178 Ga0496110_0012044 3300048913 Bacteria 7104
179 Ga0496110_0054194 3300048913 Bacteria 3527
180 Ga0496112_0168187 3300048915 Bacteria 2158
181 Ga0496113_0112535 3300048916 Bacteria 2120
182 Ga0496114_0018117 3300048917 Bacteria 5690
183 Ga0496118_0072426 3300048921 Bacteria 2475
184 Ga0496120_0097192 3300048923 Bacteria 1563
185 Ga0496126_0053745 3300048929 Bacteria 3652
186 Ga0501316_003659 3300049532 Bacteria 1507
187 Ga0501317_003834 3300049533 Bacteria 1528
188 Ga0501318_002845 3300049534 Bacteria 1537
189 Ga0501031_0000115 3300049568 Bacteria 43139
190 Ga0501032_0000052 3300049569 Bacteria 101001
191 Ga0501032_0001914 3300049569 Bacteria 16411
192 Ga0501033_0001762 3300049570 Bacteria 18926
193 Ga0501034_0003912 3300049571 Bacteria 16734
194 Ga0501034_0004192 3300049571 Bacteria 16093
195 Ga0501036_0004954 3300049572 Bacteria 10765
196 Ga0501037_0000046 3300049573 Bacteria 116524
197 Ga0501038_0000068 3300049574 Bacteria 84886
198 Ga0501039_0000362 3300049575 Bacteria 32461
199 Ga0501043_0000783 3300049579 Bacteria 28276
200 Ga0501046_0000102 3300049580 Bacteria 89938
201 Ga0501047_0005305 3300049581 Bacteria 12108
202 Ga0501048_0000006 3300049582 Bacteria 93252
203 Ga0501068_0013989 3300049584 Bacteria 4579
204 Ga0501069_0000146 3300049585 Bacteria 31605
205 Ga0501070_0002259 3300049586 Bacteria 16929
206 Ga0501073_0001270 3300049589 Bacteria 18521
207 Ga0501074_0000916 3300049590 Bacteria 18891
208 Ga0501076_0074947 3300049592 Bacteria 2712
209 Ga0501077_0021276 3300049593 Bacteria 4105
210 Ga0501080_0000051 3300049742 Bacteria 75804
211 Ga0501044_0000137 3300049823 Bacteria 89352
212 Ga0501044_0007591 3300049823 Bacteria 11921
213 nmdc:mga00v17_2633_c1 3300050491 Bacteria 9212
214 nmdc:mga05p37_37343_c1 3300050507 Bacteria 5956
215 nmdc:mga05p37_8041_c1 3300050507 Bacteria 5481
216 nmdc:mga09592_165529_c1 3300050508 Bacteria 1911
217 nmdc:mga09592_16768_c1 3300050508 Bacteria 5996
218 nmdc:mga0qj67_13751_c1 3300050509 Bacteria 6109
219 nmdc:mga06r32_21843_c1 3300050510 Bacteria 5910
220 nmdc:mga08y16_2301_c1 3300050511 Bacteria 19542
221 nmdc:mga0n895_2653_c1 3300050512 Bacteria 14112
222 nmdc:mga0rr50_13677_c1 3300050513 Bacteria 5295
223 nmdc:mga0rr50_2973_c1 3300050513 Bacteria 9693
224 nmdc:mga08x19_6664_c1 3300050514 Bacteria 6849
225 nmdc:mga0a205_10090_c1 3300050515 Bacteria 8667
226 nmdc:mga0a205_757_c1 3300050515 Bacteria 26054
227 Ga0500641_0057215 3300053096 Bacteria 1617
228 Ga0500559_0041611 3300053136 Bacteria 2003
229 Ga0501084_0000567 3300054114 Bacteria 28265
230 Ga0587077_008448 3300059493 Bacteria 1534
231 Ga0466962_0005378 3300061719 Bacteria 6160

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044684 Ga0466966_0000648 Ga0466966_0000648_14167_15591 455
2 3300044694 Ga0466963_0000943 Ga0466963_0000943_6016_7440 455
3 3300044719 Ga0466971_0000330 Ga0466971_0000330_5379_6803 455
4 3300044842 Ga0466957_0000830 Ga0466957_0000830_4799_6223 455
5 3300045049 Ga0466959_0013455 Ga0466959_0013455_3276_4700 455
6 3300045836 Ga0466958_0000068 Ga0466958_0000068_11166_12590 455
7 3300045976 Ga0466967_0016707 Ga0466967_0016707_2587_4023 455
8 3300061719 Ga0466962_0005378 Ga0466962_0005378_3848_5272 455
9 3300044693 Ga0466961_0138257 Ga0466961_0138257_28_1398 456
10 3300021388 Ga0213875_10000060 Ga0213875_100000604 457
11 3300037853 Ga0436364_0061454 Ga0436364_0061454_53781_55205 457
12 3300035398 Ga0316574_0059816 Ga0316574_0059816_997_2373 458
13 3300005437 Ga0070710_10001080 Ga0070710_100010801 460
14 3300025898 Ga0207692_10015456 Ga0207692_100154562 460
15 3300031507 Ga0307509_10219416 Ga0307509_102194162 460
16 3300031728 Ga0316578_10065148 Ga0316578_100651482 463
17 3300031733 Ga0316577_10004924 Ga0316577_100049244 463
18 3300035695 Ga0373927_0033817 Ga0373927_0033817_1585_2988 463
19 3300035724 Ga0373933_0122767 Ga0373933_0122767_175_1578 463
20 3300036712 Ga0316584_0002093 Ga0316584_0002093_6360_7772 463
21 3300002773 JGI25152J39213_1000004 JGI25152J39213_100000453 464
22 iso_pu_bacteria 2923516293 2923516631 465
23 3300035119 Ga0373956_0001135 Ga0373956_0001135_9519_10943 466
24 3300013297 Ga0157378_10023640 Ga0157378_100236402 469
25 3300049569 Ga0501032_0001914 Ga0501032_0001914_13549_14958 469
26 iso_pu_bacteria 2643221681 2644457536 469
27 3300031727 Ga0316576_10000124 Ga0316576_100001244 470
28 iso_pu_bacteria 2558860280 2559426833 470
29 iso_pu_bacteria 2643221613 2644083106 470
30 iso_pu_bacteria 2643221711 2644609392 470
31 iso_pu_bacteria 2643221721 2644666121 470
32 iso_pu_bacteria 2728369276 2729906015 470
33 iso_pu_bacteria 2751185734 2753075348 470
34 iso_pu_bacteria 2775506925 2776370209 470
35 iso_pu_bacteria 2795385470 2795787442 470
36 iso_pu_bacteria 2795385472 2795797157 470
37 iso_pu_bacteria 2811994882 2812374607 470
38 iso_pu_bacteria 2816332119 2816424982 470
39 iso_pu_bacteria 2818991318 2819427202 470
40 iso_pu_bacteria 2818991458 2819666227 470
41 iso_pu_bacteria 2818991462 2819693065 470
42 iso_pu_bacteria 2818991469 2819730300 470
43 iso_pu_bacteria 2835188231 2835191367 470
44 iso_pu_bacteria 2839986021 2839987814 470
45 iso_pu_bacteria 2857481737 2857484370 470
46 iso_pu_bacteria 2863067949 2863074177 470
47 iso_pu_bacteria 2866612099 2866615813 470
48 iso_pu_bacteria 2870721527 2870729278 470
49 iso_pu_bacteria 2887443736 2887446366 470
50 iso_pu_bacteria 2932431166 2932433067 470
51 iso_pu_bacteria 2935890801 2935894636 470
52 iso_pu_bacteria 8047710418 8047719973 470
53 3300025913 Ga0207695_10023188 Ga0207695_100231882 471
54 3300039145 Ga0237816_00185 Ga0237816_00185_2747_4231 471
55 3300049571 Ga0501034_0004192 Ga0501034_0004192_12281_13741 471
56 3300049592 Ga0501076_0074947 Ga0501076_0074947_635_2053 471
57 3300049593 Ga0501077_0021276 Ga0501077_0021276_765_2180 471
58 3300031727 Ga0316576_10017913 Ga0316576_100179134 472
59 3300036712 Ga0316584_0031538 Ga0316584_0031538_697_2115 472
60 3300003203 JGI25406J46586_10017444 JGI25406J46586_100174443 473
61 3300005347 Ga0070668_100064414 Ga0070668_1000644142 473
62 3300005457 Ga0070662_100131854 Ga0070662_1001318541 473
63 3300005719 Ga0068861_100010603 Ga0068861_1000106032 473
64 3300005937 Ga0081455_10004084 Ga0081455_100040843 473
65 3300005937 Ga0081455_10036296 Ga0081455_100362963 473
66 3300005937 Ga0081455_10110284 Ga0081455_101102841 473
67 3300005937 Ga0081455_10140533 Ga0081455_101405331 473
68 3300005981 Ga0081538_10000025 Ga0081538_1000002574 473
69 3300005985 Ga0081539_10000085 Ga0081539_10000085133 473
70 3300006051 Ga0075364_10001747 Ga0075364_100017478 473
71 3300006058 Ga0075432_10000964 Ga0075432_100009647 473
72 3300006058 Ga0075432_10005778 Ga0075432_100057784 473
73 3300006194 Ga0075427_10006755 Ga0075427_100067552 473
74 3300006844 Ga0075428_100019851 Ga0075428_1000198511 473
75 3300006847 Ga0075431_100042234 Ga0075431_1000422345 473
76 3300006852 Ga0075433_10000510 Ga0075433_1000051015 473
77 3300006852 Ga0075433_10011478 Ga0075433_100114786 473
78 3300006871 Ga0075434_100000935 Ga0075434_1000009355 473
79 3300006871 Ga0075434_100012079 Ga0075434_1000120793 473
80 3300006880 Ga0075429_100171079 Ga0075429_1001710792 473
81 3300006914 Ga0075436_100000805 Ga0075436_10000080511 473
82 3300007076 Ga0075435_100002900 Ga0075435_1000029008 473
83 3300007076 Ga0075435_100018305 Ga0075435_1000183055 473
84 3300009094 Ga0111539_10006590 Ga0111539_1000659014 473
85 3300009147 Ga0114129_10017120 Ga0114129_100171208 473
86 3300009148 Ga0105243_10021700 Ga0105243_100217003 473
87 3300009148 Ga0105243_10031022 Ga0105243_100310223 473
88 3300009176 Ga0105242_10007551 Ga0105242_100075515 473
89 3300009551 Ga0105238_10045984 Ga0105238_100459842 473
90 3300009551 Ga0105238_10149839 Ga0105238_101498392 473
91 3300009553 Ga0105249_10104071 Ga0105249_101040711 473
92 3300009553 Ga0105249_10114232 Ga0105249_101142323 473
93 3300013307 Ga0157372_10017288 Ga0157372_100172886 473
94 3300020610 Ga0154015_1286325 Ga0154015_12863251 473
95 3300025933 Ga0207706_10040607 Ga0207706_100406071 473
96 3300025934 Ga0207686_10127815 Ga0207686_101278152 473
97 3300025935 Ga0207709_10045257 Ga0207709_100452573 473
98 3300025949 Ga0207667_10075969 Ga0207667_100759691 473
99 3300025972 Ga0207668_10006203 Ga0207668_100062037 473
100 3300026118 Ga0207675_100004165 Ga0207675_10000416514 473
101 3300027907 Ga0207428_10000586 Ga0207428_1000058614 473
102 3300027907 Ga0207428_10013611 Ga0207428_100136115 473
103 3300031548 Ga0307408_100115840 Ga0307408_1001158402 473
104 3300031731 Ga0307405_10034655 Ga0307405_100346553 473
105 3300031824 Ga0307413_10016240 Ga0307413_100162403 473
106 3300031852 Ga0307410_10010372 Ga0307410_100103723 473
107 3300031852 Ga0307410_10097179 Ga0307410_100971791 473
108 3300031901 Ga0307406_10011408 Ga0307406_100114084 473
109 3300031911 Ga0307412_10053220 Ga0307412_100532201 473
110 3300031995 Ga0307409_100000379 Ga0307409_10000037918 473
111 3300032002 Ga0307416_100000521 Ga0307416_1000005214 473
112 3300032002 Ga0307416_100133753 Ga0307416_1001337531 473
113 3300032002 Ga0307416_100202647 Ga0307416_1002026471 473
114 3300032126 Ga0307415_100003308 Ga0307415_1000033087 473
115 3300042016 Ga0439463_002889 Ga0439463_002889_1233_2693 473
116 3300042439 Ga0439464_0006954 Ga0439464_0006954_202_1623 473
117 3300046515 Ga0495620_0042598 Ga0495620_0042598_468_1889 473
118 3300046559 Ga0495667_0125377 Ga0495667_0125377_118_1539 473
119 3300048913 Ga0496110_0054194 Ga0496110_0054194_974_2395 473
120 3300049568 Ga0501031_0000115 Ga0501031_0000115_13693_15114 473
121 3300049569 Ga0501032_0000052 Ga0501032_0000052_73657_75078 473
122 3300049570 Ga0501033_0001762 Ga0501033_0001762_12734_14155 473
123 3300049571 Ga0501034_0003912 Ga0501034_0003912_3517_4938 473
124 3300049572 Ga0501036_0004954 Ga0501036_0004954_2015_3436 473
125 3300049573 Ga0501037_0000046 Ga0501037_0000046_37777_39198 473
126 3300049574 Ga0501038_0000068 Ga0501038_0000068_73032_74453 473
127 3300049575 Ga0501039_0000362 Ga0501039_0000362_30127_31548 473
128 3300049579 Ga0501043_0000783 Ga0501043_0000783_4362_5783 473
129 3300049580 Ga0501046_0000102 Ga0501046_0000102_78084_79505 473
130 3300049581 Ga0501047_0005305 Ga0501047_0005305_382_1803 473
131 3300049582 Ga0501048_0000006 Ga0501048_0000006_78593_80014 473
132 3300049584 Ga0501068_0013989 Ga0501068_0013989_943_2364 473
133 3300049585 Ga0501069_0000146 Ga0501069_0000146_4282_5703 473
134 3300049586 Ga0501070_0002259 Ga0501070_0002259_6855_8276 473
135 3300049589 Ga0501073_0001270 Ga0501073_0001270_538_1959 473
136 3300049590 Ga0501074_0000916 Ga0501074_0000916_10971_12392 473
137 3300049742 Ga0501080_0000051 Ga0501080_0000051_41205_42626 473
138 3300049823 Ga0501044_0000137 Ga0501044_0000137_76135_77556 473
139 3300050491 nmdc:mga00v17_2633_c1 nmdc:mga00v17_2633_c1_6712_8133 473
140 3300050507 nmdc:mga05p37_37343_c1 nmdc:mga05p37_37343_c1_4110_5531 473
141 3300050508 nmdc:mga09592_165529_c1 nmdc:mga09592_165529_c1_363_1784 473
142 3300050511 nmdc:mga08y16_2301_c1 nmdc:mga08y16_2301_c1_2221_3642 473
143 3300050512 nmdc:mga0n895_2653_c1 nmdc:mga0n895_2653_c1_12309_13730 473
144 3300050513 nmdc:mga0rr50_13677_c1 nmdc:mga0rr50_13677_c1_807_2228 473
145 3300050513 nmdc:mga0rr50_2973_c1 nmdc:mga0rr50_2973_c1_5011_6432 473
146 3300050514 nmdc:mga08x19_6664_c1 nmdc:mga08x19_6664_c1_689_2110 473
147 3300050515 nmdc:mga0a205_10090_c1 nmdc:mga0a205_10090_c1_1325_2746 473
148 3300050515 nmdc:mga0a205_757_c1 nmdc:mga0a205_757_c1_10532_11953 473
149 3300054114 Ga0501084_0000567 Ga0501084_0000567_4445_5866 473
150 3300000549 LJQas_1003950 LJQas_10039502 474
151 3300001989 JGI24739J22299_10013999 JGI24739J22299_100139993 474
152 3300001989 JGI24739J22299_10025312 JGI24739J22299_100253122 474
153 3300001990 JGI24737J22298_10006828 JGI24737J22298_100068283 474
154 3300001990 JGI24737J22298_10011685 JGI24737J22298_100116853 474
155 3300002067 JGI24735J21928_10028460 JGI24735J21928_100284601 474
156 3300003578 Ga0006562J51391_1030144 Ga0006562J51391_10301441 474
157 3300005435 Ga0070714_100008321 Ga0070714_1000083212 474
158 3300005468 Ga0070707_100023849 Ga0070707_1000238494 474
159 3300005563 Ga0068855_100173552 Ga0068855_1001735522 474
160 3300005577 Ga0068857_100140740 Ga0068857_1001407402 474
161 3300005616 Ga0068852_100057570 Ga0068852_1000575704 474
162 3300006844 Ga0075428_100081832 Ga0075428_1000818322 474
163 3300006846 Ga0075430_100007049 Ga0075430_1000070497 474
164 3300006847 Ga0075431_100002552 Ga0075431_10000255210 474
165 3300006880 Ga0075429_100018989 Ga0075429_1000189893 474
166 3300009147 Ga0114129_10004382 Ga0114129_100043828 474
167 3300009147 Ga0114129_10035809 Ga0114129_100358093 474
168 3300009147 Ga0114129_10406630 Ga0114129_104066301 474
169 3300013104 Ga0157370_10003107 Ga0157370_1000310715 474
170 3300013105 Ga0157369_10018329 Ga0157369_100183294 474
171 3300013307 Ga0157372_10066395 Ga0157372_100663953 474
172 3300020069 Ga0197907_10301849 Ga0197907_103018491 474
173 3300020077 Ga0206351_10726834 Ga0206351_107268342 474
174 3300020078 Ga0206352_11345653 Ga0206352_113456532 474
175 3300020080 Ga0206350_11103853 Ga0206350_111038531 474
176 3300021388 Ga0213875_10002210 Ga0213875_100022104 474
177 3300022467 Ga0224712_10025790 Ga0224712_100257901 474
178 3300025910 Ga0207684_10047665 Ga0207684_100476652 474
179 3300025913 Ga0207695_10102955 Ga0207695_101029552 474
180 3300025921 Ga0207652_10221368 Ga0207652_102213681 474
181 3300025922 Ga0207646_10016173 Ga0207646_100161734 474
182 3300025928 Ga0207700_10093347 Ga0207700_100933472 474
183 3300025929 Ga0207664_10001481 Ga0207664_100014812 474
184 3300025929 Ga0207664_10065518 Ga0207664_100655182 474
185 3300025929 Ga0207664_10071332 Ga0207664_100713322 474
186 3300025944 Ga0207661_10048211 Ga0207661_100482112 474
187 3300026078 Ga0207702_10054579 Ga0207702_100545791 474
188 3300030521 Ga0307511_10003120 Ga0307511_100031209 474
189 3300030522 Ga0307512_10079582 Ga0307512_100795822 474
190 3300030731 Ga0316177_1027911 Ga0316177_10279112 474
191 3300030732 Ga0316176_1098856 Ga0316176_10988564 474
192 3300030733 Ga0314311_1033288 Ga0314311_103328810 474
193 3300031691 Ga0316579_10009979 Ga0316579_100099793 474
194 3300031727 Ga0316576_10002976 Ga0316576_100029763 474
195 3300031727 Ga0316576_10074020 Ga0316576_100740203 474
196 3300031727 Ga0316576_10128864 Ga0316576_101288641 474
197 3300031733 Ga0316577_10093595 Ga0316577_100935951 474
198 3300031995 Ga0307409_100205140 Ga0307409_1002051401 474
199 3300032002 Ga0307416_100069518 Ga0307416_1000695182 474
200 3300032133 Ga0316583_10021720 Ga0316583_100217202 474
201 3300033179 Ga0307507_10000011 Ga0307507_10000011131 474
202 3300033179 Ga0307507_10012011 Ga0307507_100120114 474
203 3300033528 Ga0316588_1015676 Ga0316588_10156761 474
204 3300033529 Ga0316587_1006556 Ga0316587_10065562 474
205 3300035692 Ga0373935_0000546 Ga0373935_0000546_8813_10237 474
206 3300035725 Ga0373947_0000001 Ga0373947_0000001_468241_469665 474
207 3300036712 Ga0316584_0023329 Ga0316584_0023329_173_1597 474
208 3300037312 Ga0395899_0178533 Ga0395899_0178533_20_1444 474
209 3300037418 Ga0395900_0078851 Ga0395900_0078851_877_2301 474
210 3300037418 Ga0395900_0114480 Ga0395900_0114480_946_2370 474
211 3300037466 Ga0395898_0044251 Ga0395898_0044251_902_2326 474
212 3300037588 Ga0316581_0001105 Ga0316581_0001105_440_1864 474
213 3300038443 Ga0395901_0002330 Ga0395901_0002330_17293_18717 474
214 3300038443 Ga0395901_0009202 Ga0395901_0009202_3925_5349 474
215 3300044656 Ga0466969_0004578 Ga0466969_0004578_2938_4362 474
216 3300044656 Ga0466969_0004865 Ga0466969_0004865_168_1595 474
217 3300044683 Ga0466965_0001705 Ga0466965_0001705_7576_9000 474
218 3300044693 Ga0466961_0003938 Ga0466961_0003938_588_2012 474
219 3300044693 Ga0466961_0044216 Ga0466961_0044216_951_2378 474
220 3300044735 Ga0466968_0000065 Ga0466968_0000065_26238_27662 474
221 3300044765 Ga0466970_0028642 Ga0466970_0028642_1466_2890 474
222 3300044765 Ga0466970_0095124 Ga0466970_0095124_32_1456 474
223 3300044901 Ga0466960_0001081 Ga0466960_0001081_4012_5436 474
224 3300045049 Ga0466959_0037191 Ga0466959_0037191_1094_2521 474
225 3300045049 Ga0466959_0038654 Ga0466959_0038654_555_1979 474
226 3300046471 Ga0495650_0025309 Ga0495650_0025309_671_2095 474
227 3300046559 Ga0495667_0061392 Ga0495667_0061392_680_2104 474
228 3300046684 Ga0495669_0032648 Ga0495669_0032648_691_2115 474
229 3300047322 Ga0495680_0191546 Ga0495680_0191546_13_1437 474
230 3300048904 Ga0496101_0048426 Ga0496101_0048426_1533_2957 474
231 3300048904 Ga0496101_0154593 Ga0496101_0154593_279_1703 474
232 3300048905 Ga0496102_0011942 Ga0496102_0011942_3442_4866 474
233 3300048905 Ga0496102_0033554 Ga0496102_0033554_2692_4116 474
234 3300048906 Ga0496103_0009709 Ga0496103_0009709_573_1997 474
235 3300048909 Ga0496106_0002080 Ga0496106_0002080_1078_2502 474
236 3300048909 Ga0496106_0136606 Ga0496106_0136606_442_1866 474
237 3300048910 Ga0496107_0103837 Ga0496107_0103837_206_1630 474
238 3300048911 Ga0496108_0019796 Ga0496108_0019796_2511_3935 474
239 3300048912 Ga0496109_0029437 Ga0496109_0029437_3477_4901 474
240 3300048912 Ga0496109_0049603 Ga0496109_0049603_1820_3244 474
241 3300048913 Ga0496110_0012044 Ga0496110_0012044_2596_4020 474
242 3300048915 Ga0496112_0168187 Ga0496112_0168187_72_1496 474
243 3300048916 Ga0496113_0112535 Ga0496113_0112535_547_1971 474
244 3300048917 Ga0496114_0018117 Ga0496114_0018117_348_1772 474
245 3300048921 Ga0496118_0072426 Ga0496118_0072426_327_1751 474
246 3300048923 Ga0496120_0097192 Ga0496120_0097192_88_1512 474
247 3300048929 Ga0496126_0053745 Ga0496126_0053745_1011_2435 474
248 3300049532 Ga0501316_003659 Ga0501316_003659_29_1453 474
249 3300049533 Ga0501317_003834 Ga0501317_003834_51_1475 474
250 3300049534 Ga0501318_002845 Ga0501318_002845_41_1465 474
251 3300049823 Ga0501044_0007591 Ga0501044_0007591_49_1473 474
252 3300050507 nmdc:mga05p37_8041_c1 nmdc:mga05p37_8041_c1_2851_4275 474
253 3300050508 nmdc:mga09592_16768_c1 nmdc:mga09592_16768_c1_765_2189 474
254 3300050509 nmdc:mga0qj67_13751_c1 nmdc:mga0qj67_13751_c1_2383_3807 474
255 3300050510 nmdc:mga06r32_21843_c1 nmdc:mga06r32_21843_c1_806_2230 474
256 3300053096 Ga0500641_0057215 Ga0500641_0057215_125_1549 474
257 3300053136 Ga0500559_0041611 Ga0500559_0041611_61_1644 474
258 3300059493 Ga0587077_008448 Ga0587077_008448_41_1465 474

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00120

Gln-synt_C

Glutamine synthetase, catalytic domain

157

524

0.99

PF03951

Gln-synt_N

Glutamine synthetase, beta-Grasp domain

69

150

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8pvg-assembly1.cif.gz_A structure of e. coli glutamine synthetase determined by cryoem at 100 kev 0.9543 3 474
8pvg-assembly1.cif.gz_A structure of e. coli glutamine synthetase determined by cryoem at 100 kev 0.9521 3 474
7w85-assembly1.cif.gz_A structural of the filamentous escherichia coli glutamine synthetase 0.9513 3 474
7w85-assembly1.cif.gz_A structural of the filamentous escherichia coli glutamine synthetase 0.9492 3 474
3ng0-assembly1.cif.gz_A crystal structure of glutamine synthetase from synechocystis sp. pcc 6803 0.9349 3 474
ID Description Score Start End Superfamily
1lgrA02 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.9616 4 106 3.10.20.70
1lgrA02 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.952 4 106 3.10.20.70
4s17D01 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.9504 6 106 3.10.20.70
3ng0A01 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.9496 6 106 3.10.20.70
1htoA01 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.9236 107 462 3.30.590.10
ID Description Score Start End GO Terms
AF-A0A6A7MUA1-F1-model_v4 deleted 0.9844 1 110
AF-A0A3M9KL00-F1-model_v4 deleted 0.9773 14 119
AF-A0A376LFA4-F1-model_v4 Glutamine synthetase (EC 6.3.1.2) 0.9743 3 130 GO:0004356
GO:0005737
GO:0006542
GO:0016020
GO:0019740
AF-A0A836T1N0-F1-model_v4 deleted 0.9724 3 107
AF-A0A356KVF6-F1-model_v4 Glutamine synthetase (EC 6.3.1.2) 0.9719 268 449 GO:0004356
GO:0005737
GO:0006542
GO:0016020
GO:0019740

Feature Viewer

pLDDT pTM Quality
84.65 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map