F368199

General Info

Members Datasets Scaffolds Average Seq Length
258 162 252 169

Family's Representative Sequence

Representative Sequence 3300031901|Ga0307406_10275750|Ga0307406_102757502
Length 200
Sequence MIRRKTTDIGLSVSHVFFGELIQILKSQHMENNTMELTKEQQKVTFMTADILLEHWQGHRRLTRKVIEAFPEDKLFTYSVGGMRPFAELAMETLRMGPPGIKGVVVGTWPTWNEVEKGYPSPKTKEELLKVWDRATDQINSLWPHIAQERFQEVVKMFGQYEGPVWWSIMYFVDNEIHHRAQGYVYLRSLGIEPPHFWER

Samples

Sample ID Description Type Environment
1 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
2 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
3 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
4 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
5 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
6 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
120 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
121 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
122 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
123 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
124 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
125 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
126 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
129 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
130 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
131 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
132 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
138 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
139 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
146 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
147 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
148 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
149 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
155 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
156 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
157 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
158 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
161 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
162 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.67
Metatranscriptomes 0
Isolates 2.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.04
Nodule 0
Rhizoplane 0.78
Rhizosphere 87.6
Stem 0
Stem Tuber 0
Unclassified 6.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1001947 3300001904 Bacteria 3671
2 JGI24737J22298_10039023 3300001990 Bacteria 1461
3 JGI24744J21845_10007102 3300002077 Bacteria 2313
4 rootH2_10006948 3300003320 Bacteria 57399
5 rootH2_10013235 3300003320 Bacteria 76391
6 rootH2_10307871 3300003320 Bacteria 1580
7 rootL2_10033393 3300003322 Bacteria 9195
8 rootL2_10043898 3300003322 Bacteria 2197
9 rootL2_10074260 3300003322 Bacteria 18154
10 rootH1_10009096 3300003323 Bacteria 43299
11 rootH1_10014301 3300003323 Bacteria 28609
12 rootH1_10034197 3300003323 Bacteria 19665
13 rootH1_10101326 3300003323 Bacteria 1145
14 Ga0065165_1003325 3300005262 Bacteria 11490
15 Ga0070676_10132862 3300005328 Unclassified 1576
16 Ga0070683_100063869 3300005329 Bacteria 3426
17 Ga0070683_100199542 3300005329 Bacteria 1900
18 Ga0070683_100219413 3300005329 Unclassified 1807
19 Ga0068869_100034805 3300005334 Bacteria 3566
20 Ga0068869_101399448 3300005334 Bacteria 619
21 Ga0070666_10794107 3300005335 Bacteria 697
22 Ga0068868_100094988 3300005338 Bacteria 2406
23 Ga0068868_100268462 3300005338 Bacteria 1441
24 Ga0070661_101766939 3300005344 Bacteria 524
25 Ga0070668_100472403 3300005347 Bacteria 1082
26 Ga0070675_100159295 3300005354 Unclassified 1940
27 Ga0070671_100013584 3300005355 Bacteria 6567
28 Ga0070688_100825695 3300005365 Unclassified 726
29 Ga0070678_100029031 3300005456 Bacteria 3783
30 Ga0070662_100000029 3300005457 Bacteria 82498
31 Ga0070662_100251544 3300005457 Bacteria 1421
32 Ga0068867_100035276 3300005459 Bacteria 3627
33 Ga0068867_100159297 3300005459 Bacteria 1779
34 Ga0070679_100122338 3300005530 Bacteria 2586
35 Ga0070684_100152395 3300005535 Bacteria 2095
36 Ga0070684_100179632 3300005535 Bacteria 1924
37 Ga0070684_100195507 3300005535 Bacteria 1842
38 Ga0068853_100005738 3300005539 Bacteria 9773
39 Ga0068853_100041371 3300005539 Bacteria 3936
40 Ga0068853_100740834 3300005539 Bacteria 939
41 Ga0070665_100000072 3300005548 Bacteria 198575
42 Ga0070665_100002844 3300005548 Bacteria 18745
43 Ga0068855_100014125 3300005563 Bacteria 9621
44 Ga0068855_100306557 3300005563 Bacteria 1758
45 Ga0070664_100037181 3300005564 Bacteria 4091
46 Ga0070664_100083960 3300005564 Bacteria 2748
47 Ga0068857_100444055 3300005577 Bacteria 1212
48 Ga0068854_100259426 3300005578 Bacteria 1391
49 Ga0068852_100006943 3300005616 Bacteria 8238
50 Ga0068852_100009532 3300005616 Bacteria 7216
51 Ga0068852_101004600 3300005616 Bacteria 853
52 Ga0068859_100297235 3300005617 Bacteria 1708
53 Ga0068864_100206754 3300005618 Bacteria 1806
54 Ga0068866_10030638 3300005718 Bacteria 2584
55 Ga0068866_10136503 3300005718 Bacteria 1402
56 Ga0068866_10540903 3300005718 Bacteria 777
57 Ga0068861_100646103 3300005719 Bacteria 977
58 Ga0068870_10021298 3300005840 Bacteria 3169
59 Ga0068863_100323947 3300005841 Bacteria 1497
60 Ga0068863_101728424 3300005841 Unclassified 635
61 Ga0068863_101810064 3300005841 Bacteria 620
62 Ga0068860_100101912 3300005843 Bacteria 2739
63 Ga0097621_100000028 3300006237 Bacteria 71678
64 Ga0068871_100000421 3300006358 Bacteria 29326
65 Ga0068871_100538452 3300006358 Bacteria 1056
66 Ga0068865_100000105 3300006881 Bacteria 43336
67 Ga0068865_100322655 3300006881 Bacteria 1243
68 Ga0097620_100297246 3300006931 Bacteria 1708
69 Ga0105240_10013266 3300009093 Bacteria 11333
70 Ga0105240_10098120 3300009093 Bacteria 3569
71 Ga0105240_10555458 3300009093 Bacteria 1270
72 Ga0105240_10857986 3300009093 Bacteria 979
73 Ga0111539_10018210 3300009094 Bacteria 8700
74 Ga0111539_10321952 3300009094 Bacteria 1799
75 Ga0105245_11307000 3300009098 Unclassified 774
76 Ga0105243_10547723 3300009148 Unclassified 1105
77 Ga0105241_10000373 3300009174 Bacteria 34154
78 Ga0105241_10018990 3300009174 Bacteria 5066
79 Ga0105242_10089744 3300009176 Unclassified 2584
80 Ga0105237_10002353 3300009545 Bacteria 23506
81 Ga0105237_10020793 3300009545 Bacteria 6760
82 Ga0105237_10166490 3300009545 Bacteria 2203
83 Ga0105238_10009402 3300009551 Bacteria 9786
84 Ga0105238_10090420 3300009551 Unclassified 3049
85 Ga0105249_10158693 3300009553 Bacteria 2184
86 Ga0105249_11834130 3300009553 Bacteria 679
87 Ga0105239_10007430 3300010375 Bacteria 12571
88 Ga0105239_10037086 3300010375 Bacteria 5347
89 Ga0105239_10055131 3300010375 Bacteria 4360
90 Ga0105239_10396146 3300010375 Bacteria 1562
91 Ga0105239_11987051 3300010375 Bacteria 675
92 Ga0105246_10723027 3300011119 Unclassified 875
93 Ga0157373_10090927 3300013100 Bacteria 2149
94 Ga0157371_10006304 3300013102 Bacteria 9823
95 Ga0157370_10000166 3300013104 Bacteria 81040
96 Ga0157369_10087978 3300013105 Bacteria 3316
97 Ga0157374_10000174 3300013296 Bacteria 59597
98 Ga0157374_10018850 3300013296 Bacteria 6099
99 Ga0157374_10192656 3300013296 Bacteria 1994
100 Ga0157374_11860724 3300013296 Unclassified 627
101 Ga0157378_10034880 3300013297 Bacteria 4448
102 Ga0157378_10036027 3300013297 Bacteria 4379
103 Ga0157378_10087755 3300013297 Bacteria 2822
104 Ga0163162_10000010 3300013306 Bacteria 302032
105 Ga0163162_10229169 3300013306 Bacteria 1988
106 Ga0163162_10322414 3300013306 Bacteria 1677
107 Ga0163162_10624239 3300013306 Bacteria 1203
108 Ga0163162_10871430 3300013306 Bacteria 1015
109 Ga0157372_10017093 3300013307 Bacteria 7786
110 Ga0157375_10015995 3300013308 Bacteria 6730
111 Ga0157375_10153171 3300013308 Bacteria 2442
112 Ga0157375_10430697 3300013308 Bacteria 1485
113 Ga0157375_10936893 3300013308 Unclassified 1008
114 Ga0157377_10581868 3300014745 Bacteria 796
115 Ga0157376_10139395 3300014969 Unclassified 2174
116 Ga0163161_10003328 3300017792 Bacteria 11266
117 Ga0163161_10360153 3300017792 Bacteria 1158
118 Ga0213872_10006000 3300021361 Bacteria 6156
119 Ga0209646_1004267 3300025246 Bacteria 2629
120 Ga0209050_1003549 3300025298 Bacteria 11357
121 Ga0209050_1048903 3300025298 Bacteria 1088
122 Ga0207642_10011216 3300025899 Unclassified 3188
123 Ga0207642_10032517 3300025899 Bacteria 2197
124 Ga0207642_10682565 3300025899 Unclassified 646
125 Ga0207647_10002951 3300025904 Bacteria 12799
126 Ga0207645_10000190 3300025907 Bacteria 49657
127 Ga0207645_10121460 3300025907 Unclassified 1696
128 Ga0207643_10038143 3300025908 Bacteria 2698
129 Ga0207654_10000277 3300025911 Bacteria 31254
130 Ga0207654_10010374 3300025911 Bacteria 4743
131 Ga0207695_10005820 3300025913 Bacteria 16211
132 Ga0207695_10006810 3300025913 Bacteria 14730
133 Ga0207695_10006908 3300025913 Bacteria 14597
134 Ga0207695_10180213 3300025913 Bacteria 2033
135 Ga0207671_10001206 3300025914 Bacteria 30711
136 Ga0207671_10002238 3300025914 Bacteria 20952
137 Ga0207671_10174849 3300025914 Bacteria 1669
138 Ga0207694_10168891 3300025924 Unclassified 1770
139 Ga0207694_10572087 3300025924 Unclassified 949
140 Ga0207659_10123992 3300025926 Unclassified 1984
141 Ga0207644_10017966 3300025931 Bacteria 4782
142 Ga0207706_10000047 3300025933 Bacteria 119022
143 Ga0207706_10127592 3300025933 Bacteria 2237
144 Ga0207686_10395289 3300025934 Unclassified 1052
145 Ga0207669_10106777 3300025937 Bacteria 1866
146 Ga0207669_10630936 3300025937 Bacteria 874
147 Ga0207704_10000073 3300025938 Bacteria 62449
148 Ga0207704_10447467 3300025938 Bacteria 1030
149 Ga0207689_10018630 3300025942 Bacteria 5857
150 Ga0207661_10001305 3300025944 Bacteria 16671
151 Ga0207661_10082257 3300025944 Bacteria 2662
152 Ga0207661_10106737 3300025944 Bacteria 2361
153 Ga0207679_10095815 3300025945 Bacteria 2307
154 Ga0207667_10008466 3300025949 Bacteria 12215
155 Ga0207667_10257935 3300025949 Bacteria 1783
156 Ga0207712_10139656 3300025961 Bacteria 1857
157 Ga0207712_10768287 3300025961 Bacteria 845
158 Ga0207668_10381078 3300025972 Bacteria 1187
159 Ga0207640_10159829 3300025981 Bacteria 1666
160 Ga0207677_10055423 3300026023 Bacteria 2711
161 Ga0207677_10092822 3300026023 Bacteria 2199
162 Ga0207677_10251022 3300026023 Unclassified 1437
163 Ga0207677_10989697 3300026023 Bacteria 762
164 Ga0207639_10046425 3300026041 Bacteria 3277
165 Ga0207639_10480380 3300026041 Bacteria 1132
166 Ga0207639_10907525 3300026041 Bacteria 823
167 Ga0207641_10948448 3300026088 Bacteria 856
168 Ga0207648_10000347 3300026089 Bacteria 50952
169 Ga0207648_10014895 3300026089 Bacteria 7168
170 Ga0207648_10091982 3300026089 Bacteria 2652
171 Ga0207674_10446442 3300026116 Bacteria 1250
172 Ga0207674_10773427 3300026116 Bacteria 927
173 Ga0207675_100141741 3300026118 Unclassified 2284
174 Ga0207698_10008984 3300026142 Bacteria 6343
175 Ga0207698_10164078 3300026142 Bacteria 1947
176 Ga0268266_10000089 3300028379 Bacteria 198566
177 Ga0268266_10020148 3300028379 Bacteria 5685
178 Ga0268264_10064857 3300028381 Bacteria 3075
179 Ga0268264_11222653 3300028381 Bacteria 761
180 Ga0307517_10008094 3300028786 Bacteria 15147
181 Ga0307513_10233590 3300031456 Unclassified 1650
182 Ga0307408_100001079 3300031548 Bacteria 20870
183 Ga0307408_100001811 3300031548 Bacteria 15567
184 Ga0307408_100007621 3300031548 Bacteria 7158
185 Ga0307405_10623500 3300031731 Bacteria 883
186 Ga0307413_10840705 3300031824 Bacteria 775
187 Ga0307406_10275750 3300031901 Bacteria 1280
188 Ga0307412_10005404 3300031911 Bacteria 7169
189 Ga0307416_100002307 3300032002 Bacteria 10897
190 Ga0307416_100705214 3300032002 Bacteria 1099
191 Ga0307416_100903139 3300032002 Bacteria 983
192 Ga0307414_10002727 3300032004 Bacteria 9290
193 Ga0307414_10004731 3300032004 Bacteria 7428
194 Ga0307415_100012802 3300032126 Unclassified 4867
195 Ga0307510_10006282 3300033180 Bacteria 14174
196 Ga0395899_0002065 3300037312 Bacteria 16531
197 Ga0395900_0000721 3300037418 Bacteria 43960
198 Ga0395898_0011080 3300037466 Bacteria 9388
199 Ga0395905_0027892 3300037471 Bacteria 5324
200 Ga0395901_0007433 3300038443 Bacteria 11056
201 Ga0436361_0836007 3300039447 Bacteria 6667
202 Ga0439439_0005503 3300041406 Bacteria 2894
203 Ga0451793_1260748 3300041452 Unclassified 736
204 Ga0451800_1490758 3300041459 Unclassified 778
205 Ga0451837_1142048 3300041494 Bacteria 1622
206 Ga0439431_0017857 3300041997 Bacteria 1672
207 Ga0439442_091025 3300042002 Unclassified 656
208 Ga0439445_0003986 3300042004 Bacteria 3331
209 Ga0439448_0016951 3300042005 Bacteria 2220
210 Ga0439449_0148038 3300042007 Unclassified 875
211 Ga0439452_098277 3300042010 Unclassified 630
212 Ga0439457_008357 3300042014 Bacteria 2446
213 Ga0450897_026303 3300042128 Bacteria 644
214 Ga0439434_0004724 3300042435 Bacteria 3991
215 Ga0466972_0033277 3300044658 Bacteria 2528
216 Ga0466963_0071846 3300044694 Unclassified 2330
217 Ga0466957_0096698 3300044842 Bacteria 1856
218 Ga0466967_0082159 3300045976 Unclassified 2911
219 Ga0466967_1677508 3300045976 Bacteria 633
220 Ga0495638_0000003 3300046460 Bacteria 888792
221 Ga0495606_0006603 3300046507 Bacteria 10654
222 Ga0495606_0207090 3300046507 Bacteria 1114
223 Ga0495631_0003663 3300046518 Bacteria 8390
224 Ga0495643_0097526 3300046522 Bacteria 1510
225 Ga0495625_0108188 3300046660 Bacteria 1902
226 Ga0495625_0184783 3300046660 Bacteria 1384
227 Ga0495649_0053660 3300046694 Bacteria 2182
228 Ga0501046_0508687 3300049580 Bacteria 862
229 Ga0501047_0468677 3300049581 Bacteria 1088
230 Ga0501047_0586451 3300049581 Bacteria 937
231 Ga0501048_0818531 3300049582 Bacteria 669
232 Ga0501217_020175 3300049661 Bacteria 1563
233 Ga0501238_042126 3300049671 Bacteria 674
234 Ga0501257_041963 3300049686 Bacteria 1125
235 Ga0501225_0000830 3300049705 Bacteria 9611
236 Ga0501245_057161 3300049708 Bacteria 705
237 Ga0501044_0125472 3300049823 Bacteria 2565
238 Ga0501044_0429550 3300049823 Bacteria 1230
239 Ga0501212_009060 3300049851 Bacteria 1395
240 nmdc:mga0qj67_287187_c1 3300050509 Bacteria 1333
241 nmdc:mga08y16_257731_c1 3300050511 Bacteria 1801
242 nmdc:mga08y16_291613_c1 3300050511 Bacteria 1682
243 Ga0500578_0180958 3300053086 Bacteria 1299
244 Ga0500562_019005 3300053108 Bacteria 1775
245 Ga0500608_000501 3300053122 Bacteria 14634
246 Ga0500642_0057610 3300053130 Bacteria 1734
247 Ga0500642_0086699 3300053130 Bacteria 1444
248 Ga0500616_0000007 3300053153 Bacteria 836875
249 Ga0500622_0000004 3300053156 Bacteria 557587
250 Ga0500622_0000005 3300053156 Bacteria 502443
251 Ga0500636_0140359 3300053177 Bacteria 1338
252 Ga0500661_021193 3300055283 Bacteria 1155

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_1677508 Ga0466967_1677508_47_439 130
2 3300026116 Ga0207674_10446442 Ga0207674_104464422 143
3 3300044694 Ga0466963_0071846 Ga0466963_0071846_1057_1512 151
4 3300045976 Ga0466967_0082159 Ga0466967_0082159_1299_1754 151
5 iso_pu_bacteria 8036736890 8036737806 152
6 iso_pu_bacteria 2890737413 2890741087 153
7 iso_pu_bacteria 2896317667 2896317973 153
8 iso_pu_bacteria 2898713307 2898714861 153
9 3300005329 Ga0070683_100219413 Ga0070683_1002194131 156
10 3300005344 Ga0070661_101766939 Ga0070661_1017669391 156
11 3300005535 Ga0070684_100179632 Ga0070684_1001796322 156
12 3300005616 Ga0068852_100009532 Ga0068852_1000095323 156
13 3300009551 Ga0105238_10090420 Ga0105238_100904203 156
14 3300025924 Ga0207694_10168891 Ga0207694_101688912 156
15 3300025944 Ga0207661_10001305 Ga0207661_100013054 156
16 3300026142 Ga0207698_10008984 Ga0207698_100089846 156
17 3300032004 Ga0307414_10004731 Ga0307414_100047312 156
18 3300005530 Ga0070679_100122338 Ga0070679_1001223382 157
19 3300025899 Ga0207642_10682565 Ga0207642_106825651 158
20 iso_pu_bacteria 2738541273 2738700710 158
21 iso_pu_bacteria 2738543014 2739254459 158
22 3300005329 Ga0070683_100063869 Ga0070683_1000638692 159
23 3300005329 Ga0070683_100199542 Ga0070683_1001995422 159
24 3300005535 Ga0070684_100152395 Ga0070684_1001523952 159
25 3300005535 Ga0070684_100195507 Ga0070684_1001955072 159
26 3300005564 Ga0070664_100037181 Ga0070664_1000371815 159
27 3300005564 Ga0070664_100083960 Ga0070664_1000839604 159
28 3300013296 Ga0157374_11860724 Ga0157374_118607241 159
29 3300025944 Ga0207661_10082257 Ga0207661_100822572 159
30 3300025944 Ga0207661_10106737 Ga0207661_101067372 159
31 3300025945 Ga0207679_10095815 Ga0207679_100958153 159
32 3300003320 rootH2_10307871 rootH2_103078712 160
33 3300003322 rootL2_10033393 rootL2_100333938 160
34 3300025298 Ga0209050_1003549 Ga0209050_10035493 160
35 3300003322 rootL2_10043898 rootL2_100438982 162
36 3300006358 Ga0068871_100538452 Ga0068871_1005384521 162
37 3300009553 Ga0105249_10158693 Ga0105249_101586932 162
38 3300013296 Ga0157374_10192656 Ga0157374_101926561 162
39 3300025246 Ga0209646_1004267 Ga0209646_10042672 162
40 3300025961 Ga0207712_10139656 Ga0207712_101396562 162
41 3300044658 Ga0466972_0033277 Ga0466972_0033277_790_1278 162
42 3300053086 Ga0500578_0180958 Ga0500578_0180958_769_1257 162
43 3300053130 Ga0500642_0086699 Ga0500642_0086699_258_746 162
44 3300053177 Ga0500636_0140359 Ga0500636_0140359_324_812 162
45 3300055283 Ga0500661_021193 Ga0500661_021193_598_1086 162
46 3300026023 Ga0207677_10251022 Ga0207677_102510224 163
47 3300041494 Ga0451837_1142048 Ga0451837_1142048_113_607 163
48 3300049580 Ga0501046_0508687 Ga0501046_0508687_346_837 163
49 3300049581 Ga0501047_0468677 Ga0501047_0468677_129_620 163
50 3300049581 Ga0501047_0586451 Ga0501047_0586451_424_915 163
51 3300049582 Ga0501048_0818531 Ga0501048_0818531_53_544 163
52 3300049823 Ga0501044_0125472 Ga0501044_0125472_1483_1974 163
53 3300049823 Ga0501044_0429550 Ga0501044_0429550_479_970 163
54 3300005328 Ga0070676_10132862 Ga0070676_101328622 164
55 3300005334 Ga0068869_100034805 Ga0068869_1000348051 164
56 3300005347 Ga0070668_100472403 Ga0070668_1004724031 164
57 3300005354 Ga0070675_100159295 Ga0070675_1001592951 164
58 3300005459 Ga0068867_100035276 Ga0068867_1000352764 164
59 3300005548 Ga0070665_100002844 Ga0070665_10000284414 164
60 3300005617 Ga0068859_100297235 Ga0068859_1002972352 164
61 3300005718 Ga0068866_10136503 Ga0068866_101365032 164
62 3300005719 Ga0068861_100646103 Ga0068861_1006461031 164
63 3300005843 Ga0068860_100101912 Ga0068860_1001019124 164
64 3300006881 Ga0068865_100322655 Ga0068865_1003226552 164
65 3300006931 Ga0097620_100297246 Ga0097620_1002972463 164
66 3300009148 Ga0105243_10547723 Ga0105243_105477231 164
67 3300009176 Ga0105242_10089744 Ga0105242_100897441 164
68 3300009553 Ga0105249_11834130 Ga0105249_118341301 164
69 3300025899 Ga0207642_10011216 Ga0207642_100112163 164
70 3300025907 Ga0207645_10121460 Ga0207645_101214602 164
71 3300025926 Ga0207659_10123992 Ga0207659_101239921 164
72 3300025938 Ga0207704_10447467 Ga0207704_104474672 164
73 3300025942 Ga0207689_10018630 Ga0207689_100186304 164
74 3300025961 Ga0207712_10768287 Ga0207712_107682871 164
75 3300025972 Ga0207668_10381078 Ga0207668_103810781 164
76 3300026089 Ga0207648_10014895 Ga0207648_100148956 164
77 3300026118 Ga0207675_100141741 Ga0207675_1001417414 164
78 3300028379 Ga0268266_10020148 Ga0268266_100201485 164
79 3300028381 Ga0268264_10064857 Ga0268264_100648572 164
80 3300041459 Ga0451800_1490758 Ga0451800_1490758_75_578 164
81 3300005841 Ga0068863_100323947 Ga0068863_1003239472 165
82 3300009093 Ga0105240_10098120 Ga0105240_100981202 165
83 3300009545 Ga0105237_10166490 Ga0105237_101664903 165
84 3300010375 Ga0105239_10037086 Ga0105239_100370866 165
85 3300013308 Ga0157375_10153171 Ga0157375_101531712 165
86 3300025298 Ga0209050_1048903 Ga0209050_10489032 165
87 3300025913 Ga0207695_10006908 Ga0207695_1000690812 165
88 3300031824 Ga0307413_10840705 Ga0307413_108407052 165
89 3300032004 Ga0307414_10002727 Ga0307414_100027275 165
90 3300044842 Ga0466957_0096698 Ga0466957_0096698_1030_1527 165
91 3300046460 Ga0495638_0000003 Ga0495638_0000003_672975_673472 165
92 3300046507 Ga0495606_0006603 Ga0495606_0006603_7939_8436 165
93 3300053153 Ga0500616_0000007 Ga0500616_0000007_93457_93954 165
94 3300031456 Ga0307513_10233590 Ga0307513_102335902 166
95 3300049686 Ga0501257_041963 Ga0501257_041963_448_948 166
96 3300003323 rootH1_10014301 rootH1_1001430120 167
97 3300049705 Ga0501225_0000830 Ga0501225_0000830_1565_2068 167
98 3300013104 Ga0157370_10000166 Ga0157370_1000016656 168
99 3300017792 Ga0163161_10003328 Ga0163161_100033284 168
100 3300017792 Ga0163161_10360153 Ga0163161_103601532 168
101 3300031548 Ga0307408_100001079 Ga0307408_10000107916 168
102 3300046522 Ga0495643_0097526 Ga0495643_0097526_283_792 169
103 3300049708 Ga0501245_057161 Ga0501245_057161_143_652 169
104 3300003320 rootH2_10006948 rootH2_1000694826 170
105 3300003323 rootH1_10009096 rootH1_1000909637 170
106 3300031548 Ga0307408_100007621 Ga0307408_1000076214 170
107 3300009094 Ga0111539_10018210 Ga0111539_100182105 171
108 3300009094 Ga0111539_10321952 Ga0111539_103219521 171
109 3300025937 Ga0207669_10106777 Ga0207669_101067772 171
110 3300031548 Ga0307408_100001811 Ga0307408_1000018114 171
111 3300031731 Ga0307405_10623500 Ga0307405_106235001 171
112 3300031901 Ga0307406_10275750 Ga0307406_102757502 171
113 3300031911 Ga0307412_10005404 Ga0307412_100054043 171
114 3300032002 Ga0307416_100002307 Ga0307416_1000023074 171
115 3300032002 Ga0307416_100705214 Ga0307416_1007052141 171
116 3300032002 Ga0307416_100903139 Ga0307416_1009031391 171
117 3300032126 Ga0307415_100012802 Ga0307415_1000128023 171
118 3300041406 Ga0439439_0005503 Ga0439439_0005503_802_1317 171
119 3300041452 Ga0451793_1260748 Ga0451793_1260748_74_589 171
120 3300041997 Ga0439431_0017857 Ga0439431_0017857_1074_1589 171
121 3300042002 Ga0439442_091025 Ga0439442_091025_120_635 171
122 3300042004 Ga0439445_0003986 Ga0439445_0003986_2061_2576 171
123 3300042007 Ga0439449_0148038 Ga0439449_0148038_244_759 171
124 3300042010 Ga0439452_098277 Ga0439452_098277_66_581 171
125 3300042014 Ga0439457_008357 Ga0439457_008357_1892_2407 171
126 3300042128 Ga0450897_026303 Ga0450897_026303_13_528 171
127 3300042435 Ga0439434_0004724 Ga0439434_0004724_289_804 171
128 3300049661 Ga0501217_020175 Ga0501217_020175_330_932 171
129 3300049851 Ga0501212_009060 Ga0501212_009060_51_653 171
130 3300050509 nmdc:mga0qj67_287187_c1 nmdc:mga0qj67_287187_c1_314_829 171
131 3300050511 nmdc:mga08y16_257731_c1 nmdc:mga08y16_257731_c1_178_693 171
132 3300050511 nmdc:mga08y16_291613_c1 nmdc:mga08y16_291613_c1_431_946 171
133 3300005577 Ga0068857_100444055 Ga0068857_1004440553 172
134 3300005578 Ga0068854_100259426 Ga0068854_1002594262 172
135 3300009093 Ga0105240_10555458 Ga0105240_105554581 172
136 3300009545 Ga0105237_10002353 Ga0105237_1000235315 172
137 3300009545 Ga0105237_10020793 Ga0105237_100207936 172
138 3300010375 Ga0105239_10007430 Ga0105239_100074308 172
139 3300013306 Ga0163162_10322414 Ga0163162_103224143 172
140 3300025913 Ga0207695_10180213 Ga0207695_101802133 172
141 3300025914 Ga0207671_10001206 Ga0207671_1000120615 172
142 3300025914 Ga0207671_10002238 Ga0207671_1000223811 172
143 3300025981 Ga0207640_10159829 Ga0207640_101598292 172
144 3300026116 Ga0207674_10773427 Ga0207674_107734271 172
145 3300049671 Ga0501238_042126 Ga0501238_042126_133_651 172
146 3300053108 Ga0500562_019005 Ga0500562_019005_981_1499 172
147 3300053156 Ga0500622_0000004 Ga0500622_0000004_378583_379101 172
148 3300053156 Ga0500622_0000005 Ga0500622_0000005_318130_318648 172
149 3300003322 rootL2_10074260 rootL2_1007426020 173
150 3300003323 rootH1_10034197 rootH1_1003419720 173
151 3300003323 rootH1_10101326 rootH1_101013262 173
152 3300005262 Ga0065165_1003325 Ga0065165_10033256 173
153 3300005334 Ga0068869_101399448 Ga0068869_1013994481 173
154 3300005335 Ga0070666_10794107 Ga0070666_107941071 173
155 3300005459 Ga0068867_100159297 Ga0068867_1001592971 173
156 3300005539 Ga0068853_100740834 Ga0068853_1007408342 173
157 3300005616 Ga0068852_101004600 Ga0068852_1010046001 173
158 3300005618 Ga0068864_100206754 Ga0068864_1002067542 173
159 3300005841 Ga0068863_101810064 Ga0068863_1018100641 173
160 3300010375 Ga0105239_11987051 Ga0105239_119870511 173
161 3300013297 Ga0157378_10034880 Ga0157378_100348802 173
162 3300013306 Ga0163162_10229169 Ga0163162_102291692 173
163 3300013306 Ga0163162_10624239 Ga0163162_106242392 173
164 3300013306 Ga0163162_10871430 Ga0163162_108714301 173
165 3300013308 Ga0157375_10430697 Ga0157375_104306972 173
166 3300026041 Ga0207639_10480380 Ga0207639_104803801 173
167 3300026088 Ga0207641_10948448 Ga0207641_109484481 173
168 3300026089 Ga0207648_10091982 Ga0207648_100919821 173
169 3300001904 JGI24736J21556_1001947 JGI24736J21556_10019472 174
170 3300001990 JGI24737J22298_10039023 JGI24737J22298_100390232 174
171 3300002077 JGI24744J21845_10007102 JGI24744J21845_100071022 174
172 3300003320 rootH2_10013235 rootH2_100132355 174
173 3300005338 Ga0068868_100094988 Ga0068868_1000949882 174
174 3300005338 Ga0068868_100268462 Ga0068868_1002684622 174
175 3300005355 Ga0070671_100013584 Ga0070671_1000135845 174
176 3300005365 Ga0070688_100825695 Ga0070688_1008256951 174
177 3300005456 Ga0070678_100029031 Ga0070678_1000290312 174
178 3300005457 Ga0070662_100000029 Ga0070662_10000002983 174
179 3300005457 Ga0070662_100251544 Ga0070662_1002515441 174
180 3300005539 Ga0068853_100005738 Ga0068853_1000057383 174
181 3300005539 Ga0068853_100041371 Ga0068853_1000413712 174
182 3300005548 Ga0070665_100000072 Ga0070665_1000000725 174
183 3300005563 Ga0068855_100014125 Ga0068855_1000141255 174
184 3300005563 Ga0068855_100306557 Ga0068855_1003065572 174
185 3300005616 Ga0068852_100006943 Ga0068852_1000069437 174
186 3300005718 Ga0068866_10030638 Ga0068866_100306382 174
187 3300005718 Ga0068866_10540903 Ga0068866_105409031 174
188 3300005840 Ga0068870_10021298 Ga0068870_100212984 174
189 3300005841 Ga0068863_101728424 Ga0068863_1017284241 174
190 3300006237 Ga0097621_100000028 Ga0097621_10000002883 174
191 3300006358 Ga0068871_100000421 Ga0068871_10000042122 174
192 3300006881 Ga0068865_100000105 Ga0068865_10000010512 174
193 3300009093 Ga0105240_10013266 Ga0105240_100132664 174
194 3300009093 Ga0105240_10857986 Ga0105240_108579862 174
195 3300009098 Ga0105245_11307000 Ga0105245_113070001 174
196 3300009174 Ga0105241_10000373 Ga0105241_100003734 174
197 3300009174 Ga0105241_10018990 Ga0105241_100189902 174
198 3300009551 Ga0105238_10009402 Ga0105238_100094029 174
199 3300010375 Ga0105239_10055131 Ga0105239_100551318 174
200 3300010375 Ga0105239_10396146 Ga0105239_103961463 174
201 3300011119 Ga0105246_10723027 Ga0105246_107230271 174
202 3300013100 Ga0157373_10090927 Ga0157373_100909273 174
203 3300013102 Ga0157371_10006304 Ga0157371_1000630413 174
204 3300013105 Ga0157369_10087978 Ga0157369_100879784 174
205 3300013296 Ga0157374_10000174 Ga0157374_100001746 174
206 3300013296 Ga0157374_10018850 Ga0157374_100188504 174
207 3300013297 Ga0157378_10036027 Ga0157378_100360274 174
208 3300013297 Ga0157378_10087755 Ga0157378_100877552 174
209 3300013306 Ga0163162_10000010 Ga0163162_10000010124 174
210 3300013307 Ga0157372_10017093 Ga0157372_100170936 174
211 3300013308 Ga0157375_10015995 Ga0157375_100159956 174
212 3300013308 Ga0157375_10936893 Ga0157375_109368932 174
213 3300014745 Ga0157377_10581868 Ga0157377_105818681 174
214 3300014969 Ga0157376_10139395 Ga0157376_101393952 174
215 3300021361 Ga0213872_10006000 Ga0213872_100060004 174
216 3300025899 Ga0207642_10032517 Ga0207642_100325172 174
217 3300025904 Ga0207647_10002951 Ga0207647_100029517 174
218 3300025907 Ga0207645_10000190 Ga0207645_1000019020 174
219 3300025908 Ga0207643_10038143 Ga0207643_100381434 174
220 3300025911 Ga0207654_10000277 Ga0207654_1000027735 174
221 3300025911 Ga0207654_10010374 Ga0207654_100103741 174
222 3300025913 Ga0207695_10005820 Ga0207695_100058206 174
223 3300025913 Ga0207695_10006810 Ga0207695_100068104 174
224 3300025914 Ga0207671_10174849 Ga0207671_101748492 174
225 3300025924 Ga0207694_10572087 Ga0207694_105720872 174
226 3300025931 Ga0207644_10017966 Ga0207644_100179662 174
227 3300025933 Ga0207706_10000047 Ga0207706_10000047108 174
228 3300025933 Ga0207706_10127592 Ga0207706_101275922 174
229 3300025934 Ga0207686_10395289 Ga0207686_103952892 174
230 3300025937 Ga0207669_10630936 Ga0207669_106309362 174
231 3300025938 Ga0207704_10000073 Ga0207704_1000007333 174
232 3300025949 Ga0207667_10008466 Ga0207667_1000846611 174
233 3300025949 Ga0207667_10257935 Ga0207667_102579352 174
234 3300026023 Ga0207677_10055423 Ga0207677_100554232 174
235 3300026023 Ga0207677_10092822 Ga0207677_100928222 174
236 3300026023 Ga0207677_10989697 Ga0207677_109896972 174
237 3300026041 Ga0207639_10046425 Ga0207639_100464253 174
238 3300026041 Ga0207639_10907525 Ga0207639_109075252 174
239 3300026089 Ga0207648_10000347 Ga0207648_1000034728 174
240 3300026142 Ga0207698_10164078 Ga0207698_101640782 174
241 3300028379 Ga0268266_10000089 Ga0268266_100000895 174
242 3300028381 Ga0268264_11222653 Ga0268264_112226531 174
243 3300028786 Ga0307517_10008094 Ga0307517_100080944 174
244 3300033180 Ga0307510_10006282 Ga0307510_1000628217 174
245 3300037312 Ga0395899_0002065 Ga0395899_0002065_3785_4309 174
246 3300037418 Ga0395900_0000721 Ga0395900_0000721_8179_8703 174
247 3300037466 Ga0395898_0011080 Ga0395898_0011080_6046_6570 174
248 3300037471 Ga0395905_0027892 Ga0395905_0027892_2612_3136 174
249 3300038443 Ga0395901_0007433 Ga0395901_0007433_1688_2212 174
250 3300039447 Ga0436361_0836007 Ga0436361_0836007_1232_1756 174
251 3300042005 Ga0439448_0016951 Ga0439448_0016951_962_1486 174
252 3300046507 Ga0495606_0207090 Ga0495606_0207090_566_1090 174
253 3300046518 Ga0495631_0003663 Ga0495631_0003663_3098_3622 174
254 3300046660 Ga0495625_0108188 Ga0495625_0108188_1081_1605 174
255 3300046660 Ga0495625_0184783 Ga0495625_0184783_45_569 174
256 3300046694 Ga0495649_0053660 Ga0495649_0053660_864_1388 174
257 3300053122 Ga0500608_000501 Ga0500608_000501_9162_9686 174
258 3300053130 Ga0500642_0057610 Ga0500642_0057610_936_1460 174

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05163

DinB

DinB family

30

200

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6iz2-assembly1.cif.gz_A crystal structure of dinb/yfit protein dr0053 from d. radiodurans r1 0.922 15 171
6iz2-assembly1.cif.gz_A crystal structure of dinb/yfit protein dr0053 from d. radiodurans r1 0.9159 15 171
2p1a-assembly1.cif.gz_B crystal structure of a putative metal-binding protein (bce_2162) from bacillus cereus atcc 10987 at 2.10 a resolution 0.8249 20 170
3di5-assembly1.cif.gz_A crystal structure of a dinb-like protein (bce_4655) from bacillus cereus atcc 10987 at 2.01 a resolution 0.8212 17 171
3dka-assembly1.cif.gz_B crystal structure of a dinb-like protein (yjoa, bsu12410) from bacillus subtilis at 2.30 a resolution 0.819 23 171
ID Description Score Start End Superfamily
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8214 22 159 1.20.120.450
5cogA00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8184 17 161 1.20.120.450
af_P71985_5_134_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8049 22 159 1.20.120.450
2yqyB00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.8011 19 156 1.20.120.450
3dkaA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7844 23 162 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A7T9SVM3-F1-model_v4 deleted 0.9684 17 174
AF-A0A4P7DU89-F1-model_v4 Damage-inducible protein DinB 0.9675 17 172
AF-A0A7W6K903-F1-model_v4 Putative damage-inducible protein DinB 0.9582 17 174
AF-A0A841LQ26-F1-model_v4 Putative damage-inducible protein DinB 0.9555 17 174
AF-A0A7W6K903-F1-model_v4 Putative damage-inducible protein DinB 0.9521 17 174

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pLDDT pTM Quality
88.29 0.82 High
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Predicted Structure (AlphaFold2)

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