F367912

General Info

Members Datasets Scaffolds Average Seq Length
258 204 516 305

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100006304|Ga0070706_1000063044
Length 326
Sequence MQSLPGSTDQRSSMRILVMGTGGLGGYFGGLLQRAGEEVIFVARGPHLRALQSGGLRVTSPDGDFALPVRATDRAAEAVPVDLVLFAVKTYDFASAAQAIRPAVGPDTAILCLQNGVETEDRLGEMYGHEHVLGGVTYVSAVIESPGVIAHTGSTGDIIFGEMDGRSTPRVRTIEKMLARAGVAAEATAEIRRRLWEKFVFICANAGMTATTRVPVGEVLSHVESRAMYRGLMEEAAAVGAIKGIPLDNVVERQMAVAERLVKGSGFDTRSSLYNDLAAGRRMELDALCGAVVRMGREYGVPTPLNFAVVAVLRPHERKAAATHGA

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
105 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
106 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
107 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
108 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
111 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
114 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
123 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
125 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
126 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
127 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
130 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
131 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
132 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
133 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
137 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
138 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
139 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
140 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
141 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
142 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
143 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
146 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
147 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
148 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
149 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
150 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
151 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
152 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
155 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
156 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
157 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
158 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
159 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
160 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
161 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
162 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
163 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
164 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
165 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
166 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
167 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
168 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
169 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
170 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
171 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
172 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
173 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
174 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
175 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
176 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
177 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
178 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
179 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
180 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
181 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
182 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
187 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
188 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
189 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
190 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
191 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
192 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
193 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
194 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
195 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
198 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
199 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
200 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.49
Nodule 0
Rhizoplane 1.55
Rhizosphere 93.41
Stem 0
Stem Tuber 0
Unclassified 11.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100006304 3300005467 Bacteria 11209
2 JGI25406J46586_10000977 3300003203 Bacteria 13433
3 rootL2_10170182 3300003322 Bacteria 2313
4 JGI25405J52794_10009461 3300003911 Bacteria 1841
5 Ga0065712_10010004 3300005290 Bacteria 3257
6 Ga0070658_10040284 3300005327 Bacteria 3769
7 Ga0070658_10089752 3300005327 Bacteria 2531
8 Ga0070683_100243533 3300005329 Bacteria 1710
9 Ga0070690_100078532 3300005330 Bacteria 2156
10 Ga0070670_100349093 3300005331 Unclassified 1299
11 Ga0070687_100025102 3300005343 Bacteria 2854
12 Ga0070669_100122500 3300005353 Bacteria 1986
13 Ga0070675_100056418 3300005354 Bacteria 3237
14 Ga0070674_100023503 3300005356 Bacteria 3991
15 Ga0070673_100183458 3300005364 Bacteria 1792
16 Ga0070667_100114853 3300005367 Bacteria 2338
17 Ga0070709_10027764 3300005434 Bacteria 3369
18 Ga0070714_100009643 3300005435 Bacteria 7601
19 Ga0070713_100046670 3300005436 Bacteria 3555
20 Ga0070713_100321341 3300005436 Bacteria 1429
21 Ga0070710_10199361 3300005437 Unclassified 1263
22 Ga0070711_100090937 3300005439 Bacteria 2199
23 Ga0070708_100149693 3300005445 Unclassified 2170
24 Ga0070708_100172440 3300005445 Bacteria 2020
25 Ga0070708_100333610 3300005445 Unclassified 1429
26 Ga0070708_100428305 3300005445 Bacteria 1248
27 Ga0070662_100015081 3300005457 Bacteria 5170
28 Ga0070662_100103412 3300005457 Bacteria 2160
29 Ga0068867_100105899 3300005459 Bacteria 2154
30 Ga0070706_100007876 3300005467 Bacteria 9956
31 Ga0070706_100079341 3300005467 Unclassified 3038
32 Ga0070707_100029199 3300005468 Bacteria 5250
33 Ga0070707_100070616 3300005468 Bacteria 3364
34 Ga0070707_100078871 3300005468 Bacteria 3178
35 Ga0070698_100018222 3300005471 Bacteria 7394
36 Ga0070698_100073980 3300005471 Bacteria 3413
37 Ga0070679_100051000 3300005530 Bacteria 4121
38 Ga0070679_100056774 3300005530 Bacteria 3901
39 Ga0070684_100335540 3300005535 Bacteria 1389
40 Ga0070697_100009678 3300005536 Bacteria 7529
41 Ga0070697_100330861 3300005536 Bacteria 1313
42 Ga0068853_100135809 3300005539 Bacteria 2205
43 Ga0070672_100139960 3300005543 Unclassified 1995
44 Ga0070686_100035654 3300005544 Bacteria 3074
45 Ga0070665_100031254 3300005548 Bacteria 5358
46 Ga0068855_100029607 3300005563 Bacteria 6544
47 Ga0070664_100117317 3300005564 Bacteria 2328
48 Ga0068856_100261474 3300005614 Bacteria 1746
49 Ga0068852_100064301 3300005616 Bacteria 3197
50 Ga0068859_100039107 3300005617 Bacteria 4758
51 Ga0068859_100563912 3300005617 Bacteria 1233
52 Ga0068861_100387127 3300005719 Bacteria 1237
53 Ga0068870_10285008 3300005840 Bacteria 1037
54 Ga0081455_10003944 3300005937 Bacteria 16856
55 Ga0081538_10011647 3300005981 Bacteria 7110
56 Ga0081539_10001716 3300005985 Bacteria 35112
57 Ga0081539_10008139 3300005985 Bacteria 9255
58 Ga0075432_10051518 3300006058 Bacteria 1453
59 Ga0070716_100062569 3300006173 Bacteria 2158
60 Ga0075362_10003666 3300006177 Bacteria 5419
61 Ga0075367_10007158 3300006178 Bacteria 5694
62 Ga0075366_10004894 3300006195 Bacteria 7225
63 Ga0075428_100015748 3300006844 Bacteria 8377
64 Ga0075428_100037067 3300006844 Bacteria 5370
65 Ga0075428_100539091 3300006844 Bacteria 1248
66 Ga0075430_100081293 3300006846 Bacteria 2714
67 Ga0075430_100406783 3300006846 Unclassified 1123
68 Ga0075429_100006081 3300006880 Bacteria 10441
69 Ga0068865_100050148 3300006881 Bacteria 2882
70 Ga0097620_100039106 3300006931 Bacteria 4758
71 Ga0097620_100563890 3300006931 Bacteria 1233
72 Ga0105240_10018561 3300009093 Bacteria 9336
73 Ga0105240_10335637 3300009093 Bacteria 1718
74 Ga0111539_10124440 3300009094 Bacteria 3022
75 Ga0105245_10167582 3300009098 Bacteria 2089
76 Ga0105247_10016835 3300009101 Bacteria 4383
77 Ga0114129_10036536 3300009147 Bacteria 6935
78 Ga0114129_10297960 3300009147 Bacteria 2150
79 Ga0105243_10106145 3300009148 Bacteria 2341
80 Ga0105237_10207352 3300009545 Bacteria 1960
81 Ga0105238_10135831 3300009551 Bacteria 2437
82 Ga0105249_10057368 3300009553 Bacteria 3567
83 Ga0105249_10412342 3300009553 Bacteria 1383
84 Ga0157378_10175001 3300013297 Bacteria 2015
85 Ga0163162_10111907 3300013306 Bacteria 2829
86 Ga0163162_10221186 3300013306 Bacteria 2023
87 Ga0157375_10390757 3300013308 Bacteria 1558
88 Ga0157379_10058763 3300014968 Bacteria 3439
89 Ga0157376_10029949 3300014969 Bacteria 4339
90 Ga0157376_10168940 3300014969 Bacteria 1990
91 Ga0163161_10286911 3300017792 Bacteria 1293
92 Ga0207666_1004626 3300025271 Bacteria 1732
93 Ga0209673_1012917 3300025273 Bacteria 3329
94 Ga0209675_1001423 3300025291 Bacteria 13817
95 Ga0209676_1018356 3300025292 Bacteria 2443
96 Ga0207682_10042574 3300025893 Bacteria 1856
97 Ga0207710_10083995 3300025900 Bacteria 1481
98 Ga0207699_10255411 3300025906 Unclassified 1209
99 Ga0207705_10031542 3300025909 Bacteria 3784
100 Ga0207684_10011194 3300025910 Bacteria 7855
101 Ga0207684_10052983 3300025910 Bacteria 3444
102 Ga0207684_10097123 3300025910 Bacteria 2515
103 Ga0207695_10083446 3300025913 Bacteria 3228
104 Ga0207663_10067507 3300025916 Bacteria 2293
105 Ga0207662_10032980 3300025918 Bacteria 3016
106 Ga0207662_10084187 3300025918 Bacteria 1945
107 Ga0207657_10030039 3300025919 Bacteria 4937
108 Ga0207652_10056585 3300025921 Bacteria 3376
109 Ga0207652_10069751 3300025921 Bacteria 3052
110 Ga0207652_10282053 3300025921 Unclassified 1499
111 Ga0207646_10026370 3300025922 Bacteria 5304
112 Ga0207646_10102304 3300025922 Plasmid 2568
113 Ga0207646_10205487 3300025922 Bacteria 1779
114 Ga0207694_10221855 3300025924 Bacteria 1542
115 Ga0207659_10364467 3300025926 Bacteria 1202
116 Ga0207700_10009636 3300025928 Bacteria 6047
117 Ga0207686_10256320 3300025934 Bacteria 1280
118 Ga0207709_10028800 3300025935 Bacteria 3214
119 Ga0207669_10086416 3300025937 Bacteria 2028
120 Ga0207665_10103221 3300025939 Bacteria 1994
121 Ga0207691_10006130 3300025940 Bacteria 11625
122 Ga0207691_10022373 3300025940 Bacteria 5963
123 Ga0207661_10056665 3300025944 Bacteria 3147
124 Ga0207679_10020484 3300025945 Bacteria 4463
125 Ga0207651_10115940 3300025960 Bacteria 2021
126 Ga0207658_10045662 3300025986 Bacteria 3195
127 Ga0207703_10403906 3300026035 Unclassified 1268
128 Ga0207639_10190031 3300026041 Bacteria 1753
129 Ga0207648_10049480 3300026089 Bacteria 3677
130 Ga0207676_10113515 3300026095 Bacteria 2271
131 Ga0207674_10051047 3300026116 Bacteria 4222
132 Ga0207674_10200367 3300026116 Bacteria 1945
133 Ga0207675_100273776 3300026118 Bacteria 1639
134 Ga0207428_10124902 3300027907 Bacteria 1971
135 Ga0268266_10542179 3300028379 Bacteria 1114
136 Ga0268264_10062074 3300028381 Bacteria 3137
137 Ga0307511_10014954 3300030521 Bacteria 7531
138 Ga0265330_10015109 3300031235 Bacteria 3575
139 Ga0265320_10004826 3300031240 Bacteria 8762
140 Ga0265325_10030352 3300031241 Bacteria 2899
141 Ga0265340_10026037 3300031247 Bacteria 2959
142 Ga0265339_10026917 3300031249 Bacteria 3289
143 Ga0307513_10242453 3300031456 Unclassified 1606
144 Ga0265313_10013523 3300031595 Bacteria 4892
145 Ga0265314_10056916 3300031711 Bacteria 2689
146 Ga0265342_10009734 3300031712 Bacteria 6731
147 Ga0316576_10162631 3300031727 Unclassified 1684
148 Ga0307410_10002579 3300031852 Bacteria 8795
149 Ga0307406_10018201 3300031901 Bacteria 4100
150 Ga0307412_10061697 3300031911 Bacteria 2521
151 Ga0307412_10278258 3300031911 Bacteria 1313
152 Ga0307409_100028337 3300031995 Bacteria 3988
153 Ga0307416_100381009 3300032002 Bacteria 1441
154 Ga0307414_10427548 3300032004 Bacteria 1156
155 Ga0307411_10004472 3300032005 Bacteria 6703
156 Ga0307415_100007139 3300032126 Bacteria 6086
157 Ga0373923_0065289 3300035111 Bacteria 1553
158 Ga0373954_0093660 3300035118 Unclassified 1445
159 Ga0373957_0004806 3300035120 Bacteria 4139
160 Ga0373943_0100059 3300035170 Unclassified 1515
161 Ga0373943_0183535 3300035170 Unclassified 1151
162 Ga0373946_0225466 3300035171 Unclassified 906
163 Ga0373935_0044640 3300035692 Bacteria 2794
164 Ga0373935_0136837 3300035692 Unclassified 1651
165 Ga0373935_0143777 3300035692 Unclassified 1613
166 Ga0373935_0431110 3300035692 Bacteria 950
167 Ga0373927_0046711 3300035695 Bacteria 2801
168 Ga0373947_0049874 3300035725 Unclassified 2515
169 Ga0373937_0003546 3300036401 Bacteria 13142
170 Ga0373937_0019985 3300036401 Bacteria 5998
171 Ga0373937_0065527 3300036401 Bacteria 3344
172 Ga0373937_0113987 3300036401 Bacteria 2516
173 Ga0373937_0270360 3300036401 Bacteria 1604
174 Ga0316584_0197354 3300036712 Bacteria 1486
175 Ga0316584_0219614 3300036712 Bacteria 1397
176 Ga0373925_0118690 3300037068 Unclassified 2051
177 Ga0395900_0169439 3300037418 Bacteria 2224
178 Ga0395901_0382081 3300038443 Bacteria 1449
179 Ga0395901_0675629 3300038443 Bacteria 1033
180 Ga0436365_0451460 3300039437 Bacteria 3717
181 Ga0439453_0007800 3300041408 Bacteria 1707
182 Ga0439444_0020539 3300042437 Bacteria 1163
183 Ga0439459_0014294 3300042438 Bacteria 1441
184 Ga0439464_0000635 3300042439 Bacteria 7462
185 Ga0439460_0058311 3300042461 Bacteria 1173
186 Ga0451577_0217714 3300042876 Bacteria 1726
187 Ga0453683_0000780 3300044673 Bacteria 31494
188 Ga0451576_0009504 3300045051 Bacteria 11268
189 Ga0451576_0134703 3300045051 Bacteria 2576
190 Ga0495592_0045904 3300046454 Bacteria 3258
191 Ga0495629_0152902 3300046459 Unclassified 1604
192 Ga0495638_0014611 3300046460 Bacteria 5299
193 Ga0495605_0069589 3300046474 Bacteria 1666
194 Ga0495664_0000719 3300046477 Bacteria 16853
195 Ga0495608_0045905 3300046511 Bacteria 2909
196 Ga0495608_0048445 3300046511 Bacteria 2823
197 Ga0495618_0168776 3300046514 Bacteria 1393
198 Ga0495628_0075759 3300046516 Bacteria 2619
199 Ga0495630_0252672 3300046517 Unclassified 1347
200 Ga0495642_0102981 3300046528 Bacteria 1216
201 Ga0495652_0144491 3300046529 Unclassified 1867
202 Ga0495640_0018535 3300046533 Bacteria 5157
203 Ga0495640_0036217 3300046533 Bacteria 3487
204 Ga0495587_0148070 3300046536 Bacteria 1338
205 Ga0495621_0020995 3300046539 Bacteria 2149
206 Ga0495645_0001051 3300046543 Bacteria 18796
207 Ga0495667_0015544 3300046559 Bacteria 5146
208 Ga0495667_0026577 3300046559 Bacteria 3901
209 Ga0495656_0032822 3300046615 Bacteria 2115
210 Ga0495634_0068026 3300046642 Bacteria 2354
211 Ga0495588_0199592 3300046674 Bacteria 1057
212 Ga0495657_0058567 3300046675 Bacteria 2558
213 Ga0495599_0012704 3300046678 Bacteria 5194
214 Ga0495623_0036316 3300046679 Bacteria 3157
215 Ga0495646_0024463 3300046680 Bacteria 3803
216 Ga0495669_0034010 3300046684 Bacteria 2246
217 Ga0495600_0017783 3300046809 Bacteria 4525
218 Ga0495600_0073341 3300046809 Unclassified 2235
219 Ga0495604_0032499 3300047317 Bacteria 4135
220 Ga0495636_0054468 3300047318 Bacteria 1681
221 Ga0495674_0244000 3300047319 Bacteria 1479
222 Ga0495674_0339721 3300047319 Bacteria 1221
223 Ga0495680_0013387 3300047322 Bacteria 7159
224 Ga0495680_0182719 3300047322 Unclassified 1513
225 Ga0495675_0031188 3300047444 Bacteria 3403
226 Ga0495684_0333713 3300047471 Unclassified 1081
227 Ga0495602_0000223 3300048088 Bacteria 52927
228 Ga0495602_0049273 3300048088 Bacteria 3775
229 Ga0495615_0000342 3300048090 Bacteria 7621
230 Ga0496104_0062244 3300048907 Bacteria 3538
231 Ga0496105_0119983 3300048908 Bacteria 2169
232 Ga0496107_0119983 3300048910 Bacteria 1937
233 Ga0496108_0549031 3300048911 Bacteria 1008
234 Ga0501033_0114856 3300049570 Bacteria 1957
235 Ga0501041_0065644 3300049577 Bacteria 2224
236 Ga0501046_0098086 3300049580 Bacteria 2250
237 Ga0501047_0574933 3300049581 Bacteria 950
238 Ga0501072_0006175 3300049588 Bacteria 9126
239 Ga0501075_0038894 3300049591 Bacteria 3558
240 Ga0501075_0074459 3300049591 Bacteria 2568
241 Ga0501077_0067919 3300049593 Bacteria 2260
242 Ga0501243_020442 3300049675 Unclassified 1089
243 Ga0501081_0204998 3300049743 Bacteria 1431
244 Ga0501081_0253295 3300049743 Bacteria 1285
245 Ga0501083_0093735 3300049744 Bacteria 1982
246 Ga0501044_0545073 3300049823 Bacteria 1057
247 nmdc:mga00v17_184625_c1 3300050491 Unclassified 1346
248 nmdc:mga05p37_228870_c1 3300050507 Bacteria 2241
249 nmdc:mga09592_237389_c1 3300050508 Bacteria 1579
250 nmdc:mga08y16_43549_c1 3300050511 Bacteria 4704
251 Ga0500635_0017028 3300053080 Bacteria 2171
252 Ga0495595_0002207 3300053084 Bacteria 7566
253 Ga0495619_0010018 3300053085 Bacteria 5966
254 Ga0500627_0089704 3300053158 Bacteria 1376
255 Ga0501084_0137604 3300054114 Bacteria 2056
256 Ga0501082_0000101 3300060353 Bacteria 66608
257 Ga0530510_0144581 3300061734 Unclassified 1754
258 2852106717 2852103415 Bacteria 5193810
259 Ga0070706_100006304
260 JGI25406J46586_10000977
261 rootL2_10170182
262 JGI25405J52794_10009461
263 Ga0065712_10010004
264 Ga0070658_10040284
265 Ga0070658_10089752
266 Ga0070683_100243533
267 Ga0070690_100078532
268 Ga0070670_100349093
269 Ga0070687_100025102
270 Ga0070669_100122500
271 Ga0070675_100056418
272 Ga0070674_100023503
273 Ga0070673_100183458
274 Ga0070667_100114853
275 Ga0070709_10027764
276 Ga0070714_100009643
277 Ga0070713_100046670
278 Ga0070713_100321341
279 Ga0070710_10199361
280 Ga0070711_100090937
281 Ga0070708_100149693
282 Ga0070708_100172440
283 Ga0070708_100333610
284 Ga0070708_100428305
285 Ga0070662_100015081
286 Ga0070662_100103412
287 Ga0068867_100105899
288 Ga0070706_100007876
289 Ga0070706_100079341
290 Ga0070707_100029199
291 Ga0070707_100070616
292 Ga0070707_100078871
293 Ga0070698_100018222
294 Ga0070698_100073980
295 Ga0070679_100051000
296 Ga0070679_100056774
297 Ga0070684_100335540
298 Ga0070697_100009678
299 Ga0070697_100330861
300 Ga0068853_100135809
301 Ga0070672_100139960
302 Ga0070686_100035654
303 Ga0070665_100031254
304 Ga0068855_100029607
305 Ga0070664_100117317
306 Ga0068856_100261474
307 Ga0068852_100064301
308 Ga0068859_100039107
309 Ga0068859_100563912
310 Ga0068861_100387127
311 Ga0068870_10285008
312 Ga0081455_10003944
313 Ga0081538_10011647
314 Ga0081539_10001716
315 Ga0081539_10008139
316 Ga0075432_10051518
317 Ga0070716_100062569
318 Ga0075362_10003666
319 Ga0075367_10007158
320 Ga0075366_10004894
321 Ga0075428_100015748
322 Ga0075428_100037067
323 Ga0075428_100539091
324 Ga0075430_100081293
325 Ga0075430_100406783
326 Ga0075429_100006081
327 Ga0068865_100050148
328 Ga0097620_100039106
329 Ga0097620_100563890
330 Ga0105240_10018561
331 Ga0105240_10335637
332 Ga0111539_10124440
333 Ga0105245_10167582
334 Ga0105247_10016835
335 Ga0114129_10036536
336 Ga0114129_10297960
337 Ga0105243_10106145
338 Ga0105237_10207352
339 Ga0105238_10135831
340 Ga0105249_10057368
341 Ga0105249_10412342
342 Ga0157378_10175001
343 Ga0163162_10111907
344 Ga0163162_10221186
345 Ga0157375_10390757
346 Ga0157379_10058763
347 Ga0157376_10029949
348 Ga0157376_10168940
349 Ga0163161_10286911
350 Ga0207666_1004626
351 Ga0209673_1012917
352 Ga0209675_1001423
353 Ga0209676_1018356
354 Ga0207682_10042574
355 Ga0207710_10083995
356 Ga0207699_10255411
357 Ga0207705_10031542
358 Ga0207684_10011194
359 Ga0207684_10052983
360 Ga0207684_10097123
361 Ga0207695_10083446
362 Ga0207663_10067507
363 Ga0207662_10032980
364 Ga0207662_10084187
365 Ga0207657_10030039
366 Ga0207652_10056585
367 Ga0207652_10069751
368 Ga0207652_10282053
369 Ga0207646_10026370
370 Ga0207646_10102304
371 Ga0207646_10205487
372 Ga0207694_10221855
373 Ga0207659_10364467
374 Ga0207700_10009636
375 Ga0207686_10256320
376 Ga0207709_10028800
377 Ga0207669_10086416
378 Ga0207665_10103221
379 Ga0207691_10006130
380 Ga0207691_10022373
381 Ga0207661_10056665
382 Ga0207679_10020484
383 Ga0207651_10115940
384 Ga0207658_10045662
385 Ga0207703_10403906
386 Ga0207639_10190031
387 Ga0207648_10049480
388 Ga0207676_10113515
389 Ga0207674_10051047
390 Ga0207674_10200367
391 Ga0207675_100273776
392 Ga0207428_10124902
393 Ga0268266_10542179
394 Ga0268264_10062074
395 Ga0307511_10014954
396 Ga0265330_10015109
397 Ga0265320_10004826
398 Ga0265325_10030352
399 Ga0265340_10026037
400 Ga0265339_10026917
401 Ga0307513_10242453
402 Ga0265313_10013523
403 Ga0265314_10056916
404 Ga0265342_10009734
405 Ga0316576_10162631
406 Ga0307410_10002579
407 Ga0307406_10018201
408 Ga0307412_10061697
409 Ga0307412_10278258
410 Ga0307409_100028337
411 Ga0307416_100381009
412 Ga0307414_10427548
413 Ga0307411_10004472
414 Ga0307415_100007139
415 Ga0373923_0065289
416 Ga0373954_0093660
417 Ga0373957_0004806
418 Ga0373943_0100059
419 Ga0373943_0183535
420 Ga0373946_0225466
421 Ga0373935_0044640
422 Ga0373935_0136837
423 Ga0373935_0143777
424 Ga0373935_0431110
425 Ga0373927_0046711
426 Ga0373947_0049874
427 Ga0373937_0003546
428 Ga0373937_0019985
429 Ga0373937_0065527
430 Ga0373937_0113987
431 Ga0373937_0270360
432 Ga0316584_0197354
433 Ga0316584_0219614
434 Ga0373925_0118690
435 Ga0395900_0169439
436 Ga0395901_0382081
437 Ga0395901_0675629
438 Ga0436365_0451460
439 Ga0439453_0007800
440 Ga0439444_0020539
441 Ga0439459_0014294
442 Ga0439464_0000635
443 Ga0439460_0058311
444 Ga0451577_0217714
445 Ga0453683_0000780
446 Ga0451576_0009504
447 Ga0451576_0134703
448 Ga0495592_0045904
449 Ga0495629_0152902
450 Ga0495638_0014611
451 Ga0495605_0069589
452 Ga0495664_0000719
453 Ga0495608_0045905
454 Ga0495608_0048445
455 Ga0495618_0168776
456 Ga0495628_0075759
457 Ga0495630_0252672
458 Ga0495642_0102981
459 Ga0495652_0144491
460 Ga0495640_0018535
461 Ga0495640_0036217
462 Ga0495587_0148070
463 Ga0495621_0020995
464 Ga0495645_0001051
465 Ga0495667_0015544
466 Ga0495667_0026577
467 Ga0495656_0032822
468 Ga0495634_0068026
469 Ga0495588_0199592
470 Ga0495657_0058567
471 Ga0495599_0012704
472 Ga0495623_0036316
473 Ga0495646_0024463
474 Ga0495669_0034010
475 Ga0495600_0017783
476 Ga0495600_0073341
477 Ga0495604_0032499
478 Ga0495636_0054468
479 Ga0495674_0244000
480 Ga0495674_0339721
481 Ga0495680_0013387
482 Ga0495680_0182719
483 Ga0495675_0031188
484 Ga0495684_0333713
485 Ga0495602_0000223
486 Ga0495602_0049273
487 Ga0495615_0000342
488 Ga0496104_0062244
489 Ga0496105_0119983
490 Ga0496107_0119983
491 Ga0496108_0549031
492 Ga0501033_0114856
493 Ga0501041_0065644
494 Ga0501046_0098086
495 Ga0501047_0574933
496 Ga0501072_0006175
497 Ga0501075_0038894
498 Ga0501075_0074459
499 Ga0501077_0067919
500 Ga0501243_020442
501 Ga0501081_0204998
502 Ga0501081_0253295
503 Ga0501083_0093735
504 Ga0501044_0545073
505 nmdc:mga00v17_184625_c1
506 nmdc:mga05p37_228870_c1
507 nmdc:mga09592_237389_c1
508 nmdc:mga08y16_43549_c1
509 Ga0500635_0017028
510 Ga0495595_0002207
511 Ga0495619_0010018
512 Ga0500627_0089704
513 Ga0501084_0137604
514 Ga0501082_0000101
515 Ga0530510_0144581
516 2852106717

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

16

165

0.99

PF08546

ApbA_C

Ketopantoate reductase PanE/ApbA C terminal

190

317

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ayv-assembly1.cif.gz_A crystal structure of archaeal ketopantoate reductase complexed with coenzyme a and 2-oxopantoate 0.9347 1 301
5hws-assembly1.cif.gz_D crystal structure of ketopantoate reductase from thermococcus kodakarensis complexed with nadp+ 0.9315 1 301
3hwr-assembly1.cif.gz_B crystal structure of pane/apba family ketopantoate reductase (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.9282 1 301
3hn2-assembly2.cif.gz_D crystal structure of 2-dehydropantoate 2-reductase from geobacter metallireducens gs-15 0.927 1 298
5hws-assembly1.cif.gz_D crystal structure of ketopantoate reductase from thermococcus kodakarensis complexed with nadp+ 0.9225 1 301
ID Description Score Start End Superfamily
5hwsD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9372 1 174 3.40.50.720
3g17F02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9331 177 300 1.10.1040.10
3hn2C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9295 1 175 3.40.50.720
4s3mA02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9287 181 300 1.10.1040.10
5hwsD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9215 1 174 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A522QHB1-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.987 1 268 GO:0005737
GO:0008677
GO:0015940
AF-A0A537V6J1-F1-model_v4 2-dehydropantoate 2-reductase 0.9865 1 162 GO:0005737
AF-E5DGA2-F1-model_v4 Putative 2-dehydropantoate 2-reductase 0.9824 139 305 GO:0005737
AF-A0A1F4A1B8-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9797 1 304 GO:0005737
GO:0008677
GO:0015940
AF-A0A2E4XWW6-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9786 1 304 GO:0005737
GO:0008677
GO:0015940

Map