F367881

General Info

Members Datasets Scaffolds Average Seq Length
258 197 516 352

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100080411|Ga0070714_1000804114
Length 380
Sequence MTETVLVTGGTGFVATHLVAQLLDRGYTVRASVRSLANTVKVEPLRRLGAGREGRLELFEADLLRPGSFDAATDGCRYVFHVASPFLLPEQIKNTGTDVIRPAVEGTRNIIAGIEAAPSVRRLVLTSTVGAIFGDYIDVLSMKNQTLTEEYFNTTSTPENNPYHYAKTVAEQAARELARTQDRWSLVTVNPGLILGPALTPASDSGSLFLMNELMAGYFFYGAPGFSFTFADVRDVAQAHIKAAENPAASGRYILARPEMVSMHEMATIIRGKYPRRVLIPRHRVPDIAVRVLGPRFGLTPGYITKHLGISFAVDNHRSVDELGLVYRPVRETMLDHYESWHARQRKAARTANALRVRSPGRTPCGTGSRAGPPARWRRR

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
34 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
75 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
78 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
79 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
80 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
81 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
82 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
83 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
84 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
85 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
86 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
87 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
92 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
93 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
94 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
95 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
96 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
99 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
117 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
118 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
138 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
139 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
140 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
141 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
142 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
148 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
149 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
150 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
151 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
152 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
163 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
164 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
165 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
166 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
167 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
168 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
169 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
170 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
171 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
172 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
173 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
174 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
175 2599185155 Pseudomonas sp. NFACC10-1 Isolate Rhizoplane
176 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
177 2643221714 Streptomyces sp. Root264 Isolate Unclassified
178 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
179 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
180 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
181 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
182 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
183 2867428634 Streptomyces sp. RP5T Isolate Unclassified
184 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
185 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
186 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
187 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
188 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
189 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
190 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
191 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
192 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
193 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
194 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
195 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
196 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
197 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.98
Metatranscriptomes 2.71
Isolates 9.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.53
Nodule 0.39
Rhizoplane 1.16
Rhizosphere 76.36
Stem 0
Stem Tuber 0
Unclassified 5.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100080411 3300005435 Bacteria 2836
2 JGI24739J22299_10031589 3300001989 Bacteria 1829
3 rootH2_10080903 3300003320 Eukaryota 4624
4 rootH1_10073701 3300003323 Bacteria 2941
5 rootH1_10147660 3300003323 Bacteria 2106
6 Ga0006562J51391_1058095 3300003578 Bacteria 7111
7 Ga0055528_1003820 3300003790 Eukaryota 7414
8 Ga0070713_100211385 3300005436 Bacteria 1756
9 Ga0070663_100033003 3300005455 Bacteria 3573
10 Ga0070706_100095530 3300005467 Bacteria 2759
11 Ga0068853_100116179 3300005539 Bacteria 2382
12 Ga0070665_100102722 3300005548 Bacteria 2862
13 Ga0068855_100025659 3300005563 Bacteria 7049
14 Ga0068855_100028796 3300005563 Bacteria 6645
15 Ga0070664_100104970 3300005564 Bacteria 2461
16 Ga0068854_100007914 3300005578 Bacteria 6802
17 Ga0068856_100136567 3300005614 Bacteria 2457
18 Ga0068852_100047193 3300005616 Bacteria 3674
19 Ga0068852_100099633 3300005616 Bacteria 2620
20 Ga0068862_100013803 3300005844 Bacteria 6696
21 Ga0081455_10057285 3300005937 Bacteria 3303
22 Ga0075365_10007639 3300006038 Bacteria 6075
23 Ga0075368_10012666 3300006042 Bacteria 3089
24 Ga0070712_100141348 3300006175 Bacteria 1837
25 Ga0075367_10006071 3300006178 Bacteria 6068
26 Ga0075366_10107038 3300006195 Bacteria 1681
27 Ga0075370_10079416 3300006353 Unclassified 1884
28 Ga0105240_10090219 3300009093 Bacteria 3747
29 Ga0114129_10270653 3300009147 Bacteria 2273
30 Ga0105241_10001436 3300009174 Bacteria 18250
31 Ga0105241_10005315 3300009174 Bacteria 9513
32 Ga0105237_10016114 3300009545 Bacteria 7773
33 Ga0105238_10010298 3300009551 Bacteria 9380
34 Ga0105239_10005420 3300010375 Bacteria 14967
35 Ga0105239_10067305 3300010375 Bacteria 3935
36 Ga0105246_10002603 3300011119 Bacteria 10917
37 Ga0157374_10010356 3300013296 Bacteria 8021
38 Ga0157374_10131729 3300013296 Bacteria 2420
39 Ga0183367_1008 3300015688 Bacteria 490626
40 Ga0206356_11735071 3300020070 Eukaryota 2550
41 Ga0206352_10874658 3300020078 Eukaryota 2426
42 Ga0206350_10065627 3300020080 Eukaryota 2314
43 Ga0206350_10705236 3300020080 Eukaryota 1843
44 Ga0206353_11895631 3300020082 Eukaryota 3290
45 Ga0213872_10011074 3300021361 Bacteria 4275
46 Ga0224712_10017484 3300022467 Eukaryota 2379
47 Ga0209673_1000927 3300025273 Eukaryota 36986
48 Ga0207655_1011719 3300025728 Bacteria 5189
49 Ga0207647_10005822 3300025904 Bacteria 8987
50 Ga0207647_10008027 3300025904 Bacteria 7591
51 Ga0207705_10282523 3300025909 Bacteria 1271
52 Ga0207654_10121084 3300025911 Bacteria 1643
53 Ga0207695_10005762 3300025913 Bacteria 16307
54 Ga0207695_10013128 3300025913 Bacteria 9888
55 Ga0207671_10000543 3300025914 Bacteria 50950
56 Ga0207671_10008819 3300025914 Bacteria 8493
57 Ga0207693_10135144 3300025915 Bacteria 1939
58 Ga0207657_10083631 3300025919 Bacteria 2677
59 Ga0207694_10048735 3300025924 Bacteria 3278
60 Ga0207694_10052220 3300025924 Bacteria 3169
61 Ga0207700_10019834 3300025928 Bacteria 4550
62 Ga0207664_10036788 3300025929 Bacteria 3784
63 Ga0207690_10026661 3300025932 Bacteria 3641
64 Ga0207667_10013383 3300025949 Bacteria 9387
65 Ga0207667_10036674 3300025949 Bacteria 5250
66 Ga0207668_10000451 3300025972 Bacteria 25967
67 Ga0207640_10009632 3300025981 Bacteria 5417
68 Ga0207640_10034809 3300025981 Bacteria 3147
69 Ga0207658_10005372 3300025986 Bacteria 8796
70 Ga0207639_10075241 3300026041 Bacteria 2655
71 Ga0207639_10089035 3300026041 Bacteria 2465
72 Ga0207678_10057395 3300026067 Bacteria 3350
73 Ga0207702_10021060 3300026078 Bacteria 5396
74 Ga0207698_10029287 3300026142 Bacteria 3941
75 Ga0207698_10104446 3300026142 Bacteria 2357
76 Ga0209371_1000064 3300027312 Bacteria 218637
77 Ga0209371_1000163 3300027312 Bacteria 100853
78 Ga0209371_1001011 3300027312 Bacteria 21486
79 Ga0209813_10005457 3300027866 Bacteria 3087
80 Ga0268266_10071403 3300028379 Bacteria 3009
81 Ga0268265_10055539 3300028380 Bacteria 3009
82 Ga0268264_10000279 3300028381 Bacteria 86620
83 Ga0307517_10003773 3300028786 Bacteria 23555
84 Ga0307515_10001972 3300028794 Bacteria 45455
85 Ga0268256_1000028 3300030500 Bacteria 433179
86 Ga0268256_1000309 3300030500 Bacteria 49128
87 Ga0307511_10000047 3300030521 Bacteria 98863
88 Ga0307512_10001903 3300030522 Bacteria 27862
89 Ga0307513_10006352 3300031456 Bacteria 15464
90 Ga0307513_10057195 3300031456 Bacteria 4157
91 Ga0307509_10043035 3300031507 Bacteria 4888
92 Ga0307509_10249453 3300031507 Bacteria 1560
93 Ga0307509_10355372 3300031507 Bacteria 1187
94 Ga0307508_10001426 3300031616 Bacteria 26895
95 Ga0307508_10009123 3300031616 Bacteria 9137
96 Ga0307508_10040257 3300031616 Bacteria 4196
97 Ga0316575_10009789 3300031665 Bacteria 3515
98 Ga0316579_10010892 3300031691 Bacteria 3852
99 Ga0316576_10006270 3300031727 Bacteria 7384
100 Ga0316576_10247786 3300031727 Bacteria 1337
101 Ga0316578_10034398 3300031728 Bacteria 2909
102 Ga0316578_10063900 3300031728 Bacteria 2172
103 Ga0307516_10003172 3300031730 Bacteria 21396
104 Ga0307516_10007850 3300031730 Bacteria 12162
105 Ga0307516_10113311 3300031730 Bacteria 2510
106 Ga0307516_10117475 3300031730 Bacteria 2454
107 Ga0307518_10135791 3300031838 Bacteria 1722
108 Ga0316585_10015259 3300032137 Bacteria 2301
109 Ga0316580_10005758 3300032139 Bacteria 3633
110 Ga0307507_10010621 3300033179 Bacteria 11843
111 Ga0307510_10007245 3300033180 Bacteria 13211
112 Ga0307510_10028365 3300033180 Bacteria 6393
113 Ga0307510_10185769 3300033180 Bacteria 1634
114 Ga0373942_0000701 3300035207 Bacteria 9292
115 Ga0316574_0179179 3300035398 Bacteria 1363
116 Ga0316582_0094487 3300036647 Bacteria 1972
117 Ga0316584_0064664 3300036712 Bacteria 2739
118 Ga0395900_0184523 3300037418 Bacteria 2118
119 Ga0316581_0002861 3300037588 Bacteria 4222
120 Ga0436361_0400618 3300039447 Bacteria 29489
121 Ga0436361_1050371 3300039447 Bacteria 4095
122 Ga0451845_0046547 3300041501 Bacteria 1421
123 Ga0439449_0050709 3300042007 Bacteria 1535
124 Ga0439455_0003480 3300042012 Bacteria 3014
125 Ga0450903_000048 3300042138 Bacteria 23819
126 Ga0450907_007803 3300042146 Bacteria 1783
127 Ga0439458_0002588 3300042157 Bacteria 4376
128 Ga0451577_0008032 3300042876 Bacteria 10301
129 Ga0453683_0011067 3300044673 Bacteria 5962
130 Ga0466965_0005057 3300044683 Bacteria 5911
131 Ga0466961_0026215 3300044693 Bacteria 3748
132 Ga0466963_0001171 3300044694 Bacteria 13760
133 Ga0466964_0004589 3300044706 Bacteria 5108
134 Ga0453684_0040096 3300044712 Bacteria 6367
135 Ga0466971_0000564 3300044719 Bacteria 14651
136 Ga0466971_0039488 3300044719 Bacteria 2118
137 Ga0466970_0001200 3300044765 Bacteria 12578
138 Ga0466959_0016244 3300045049 Bacteria 5435
139 Ga0451576_0355603 3300045051 Unclassified 1533
140 Ga0466958_0000065 3300045836 Bacteria 31527
141 Ga0466967_0092406 3300045976 Bacteria 2751
142 Ga0495592_0050205 3300046454 Bacteria 3100
143 Ga0495592_0052506 3300046454 Eukaryota 3026
144 Ga0495592_0142941 3300046454 Unclassified 1662
145 Ga0495629_0016509 3300046459 Bacteria 5300
146 Ga0495629_0053875 3300046459 Bacteria 2813
147 Ga0495629_0105456 3300046459 Bacteria 1966
148 Ga0495641_0000016 3300046461 Eukaryota 134928
149 Ga0495651_0096231 3300046462 Bacteria 2212
150 Ga0495653_0043861 3300046463 Unclassified 3474
151 Ga0495650_0000135 3300046471 Bacteria 172251
152 Ga0495639_0009991 3300046475 Bacteria 4078
153 Ga0495662_0001353 3300046476 Bacteria 12126
154 Ga0495662_0002620 3300046476 Bacteria 9099
155 Ga0495662_0008894 3300046476 Bacteria 4932
156 Ga0495664_0000236 3300046477 Bacteria 26604
157 Ga0495608_0005901 3300046511 Eukaryota 8709
158 Ga0495618_0006683 3300046514 Eukaryota 6989
159 Ga0495618_0039518 3300046514 Eukaryota 2966
160 Ga0495618_0136950 3300046514 Bacteria 1566
161 Ga0495628_0055932 3300046516 Unclassified 3107
162 Ga0495630_0059635 3300046517 Unclassified 2863
163 Ga0495630_0120408 3300046517 Bacteria 1991
164 Ga0495630_0214573 3300046517 Bacteria 1469
165 Ga0495632_0029586 3300046519 Bacteria 2850
166 Ga0495632_0043355 3300046519 Bacteria 2249
167 Ga0495643_0030992 3300046522 Bacteria 2980
168 Ga0495652_0002869 3300046529 Eukaryota 17380
169 Ga0495652_0014639 3300046529 Bacteria 7033
170 Ga0495652_0096992 3300046529 Eukaryota 2399
171 Ga0495586_0102436 3300046535 Bacteria 1589
172 Ga0495587_0001199 3300046536 Bacteria 17150
173 Ga0495645_0026498 3300046543 Unclassified 4208
174 Ga0495634_0000597 3300046642 Bacteria 35071
175 Ga0495634_0005106 3300046642 Eukaryota 10139
176 Ga0495635_0000810 3300046663 Bacteria 20485
177 Ga0495588_0000877 3300046674 Bacteria 13306
178 Ga0495588_0008242 3300046674 Bacteria 4771
179 Ga0495657_0003469 3300046675 Bacteria 12859
180 Ga0495657_0005545 3300046675 Bacteria 9967
181 Ga0495657_0031374 3300046675 Unclassified 3715
182 Ga0495599_0001728 3300046678 Eukaryota 12634
183 Ga0495646_0000142 3300046680 Eukaryota 36603
184 Ga0495646_0019635 3300046680 Bacteria 4275
185 Ga0495658_0082889 3300046683 Bacteria 1885
186 Ga0495613_0000319 3300046689 Bacteria 43656
187 Ga0495613_0042311 3300046689 Bacteria 3371
188 Ga0495613_0043296 3300046689 Bacteria 3330
189 Ga0495624_0000100 3300046690 Eukaryota 58303
190 Ga0495670_0037000 3300046691 Bacteria 2432
191 Ga0495671_0030559 3300046692 Bacteria 2758
192 Ga0495600_0037586 3300046809 Eukaryota 3148
193 Ga0495581_0011088 3300047315 Bacteria 5209
194 Ga0495604_0001916 3300047317 Bacteria 16852
195 Ga0495674_0019336 3300047319 Bacteria 6321
196 Ga0495674_0055515 3300047319 Unclassified 3473
197 Ga0495676_0000151 3300047321 Eukaryota 53398
198 Ga0495676_0046469 3300047321 Bacteria 3522
199 Ga0495676_0061033 3300047321 Eukaryota 2951
200 Ga0495676_0101605 3300047321 Unclassified 2126
201 Ga0495680_0067554 3300047322 Unclassified 2733
202 Ga0495687_002234 3300047443 Bacteria 15985
203 Ga0495687_011904 3300047443 Bacteria 4644
204 Ga0495675_0075583 3300047444 Unclassified 2123
205 Ga0495675_0113750 3300047444 Bacteria 1688
206 Ga0495685_012193 3300047447 Bacteria 2910
207 Ga0495681_0003059 3300047470 Bacteria 11736
208 Ga0495681_0004925 3300047470 Bacteria 9019
209 Ga0495593_0001745 3300047673 Bacteria 12875
210 Ga0495602_0000869 3300048088 Eukaryota 29202
211 Ga0495602_0005718 3300048088 Bacteria 13041
212 Ga0495602_0269012 3300048088 Unclassified 1260
213 Ga0495614_0019458 3300048089 Bacteria 2937
214 Ga0496101_0231066 3300048904 Bacteria 1438
215 Ga0496109_0052756 3300048912 Bacteria 3707
216 Ga0496124_0044163 3300048927 Bacteria 3826
217 Ga0501034_0028961 3300049571 Bacteria 5632
218 nmdc:mga0yw44_98869_c1 3300050492 Bacteria 1856
219 nmdc:mga0k408_65813_c1 3300050493 Bacteria 2110
220 nmdc:mga06z11_706_c1 3300050494 Bacteria 12132
221 nmdc:mga07m45_21409_c1 3300050496 Bacteria 3143
222 nmdc:mga05p37_245790_c1 3300050507 Bacteria 2148
223 Ga0495655_0036842 3300053083 Bacteria 1225
224 Ga0500578_0044463 3300053086 Bacteria 2850
225 Ga0500640_001373 3300053095 Bacteria 7321
226 Ga0500562_019741 3300053108 Bacteria 1746
227 Ga0500594_0006062 3300053118 Bacteria 2703
228 Ga0500652_012915 3300053131 Bacteria 2945
229 Ga0500658_0012564 3300053134 Bacteria 3125
230 Ga0500573_0030831 3300053140 Bacteria 3094
231 Ga0500600_0030503 3300053149 Bacteria 3172
232 Ga0500616_0094345 3300053153 Bacteria 1474
233 Ga0500634_0010265 3300053161 Bacteria 4776
234 Ga0466962_0014347 3300061719 Bacteria 3819
235 2585306558 2582581313 Bacteria 10042643
236 2599329976 2599185155 Bacteria 5827168
237 2644440746 2643221678 Bacteria 9540101
238 2644630264 2643221714 Bacteria 9015452
239 2785366653 2784746768 Bacteria 10036182
240 2786667726 2786546132 Bacteria 10419719
241 2806065730 2802429636 Bacteria 7597525
242 2808845536 2808606359 Bacteria 9866990
243 2808919568 2808606375 Bacteria 9466072
244 2867431984 2867428634 Bacteria 9590268
245 2877683895 2877676314 Bacteria 9512378
246 2904436986 2904434214 Bacteria 6230908
247 2946079351 2946072368 Bacteria 8999607
248 2954389178 2954380949 Bacteria 10050426
249 2954673866 2954673503 Bacteria 9685905
250 2954690125 2954682443 Bacteria 9862841
251 2954699936 2954691527 Bacteria 10720516
252 2954702261 2954701450 Bacteria 10834262
253 2954718804 2954711539 Bacteria 10867210
254 2954728773 2954721474 Bacteria 10456478
255 2954733037 2954731030 Bacteria 10243860
256 2954747673 2954740390 Bacteria 10229294
257 2954751917 2954749733 Bacteria 10366972
258 2954766795 2954759201 Bacteria 9358192
259 Ga0070714_100080411
260 JGI24739J22299_10031589
261 rootH2_10080903
262 rootH1_10073701
263 rootH1_10147660
264 Ga0006562J51391_1058095
265 Ga0055528_1003820
266 Ga0070713_100211385
267 Ga0070663_100033003
268 Ga0070706_100095530
269 Ga0068853_100116179
270 Ga0070665_100102722
271 Ga0068855_100025659
272 Ga0068855_100028796
273 Ga0070664_100104970
274 Ga0068854_100007914
275 Ga0068856_100136567
276 Ga0068852_100047193
277 Ga0068852_100099633
278 Ga0068862_100013803
279 Ga0081455_10057285
280 Ga0075365_10007639
281 Ga0075368_10012666
282 Ga0070712_100141348
283 Ga0075367_10006071
284 Ga0075366_10107038
285 Ga0075370_10079416
286 Ga0105240_10090219
287 Ga0114129_10270653
288 Ga0105241_10001436
289 Ga0105241_10005315
290 Ga0105237_10016114
291 Ga0105238_10010298
292 Ga0105239_10005420
293 Ga0105239_10067305
294 Ga0105246_10002603
295 Ga0157374_10010356
296 Ga0157374_10131729
297 Ga0183367_1008
298 Ga0206356_11735071
299 Ga0206352_10874658
300 Ga0206350_10065627
301 Ga0206350_10705236
302 Ga0206353_11895631
303 Ga0213872_10011074
304 Ga0224712_10017484
305 Ga0209673_1000927
306 Ga0207655_1011719
307 Ga0207647_10005822
308 Ga0207647_10008027
309 Ga0207705_10282523
310 Ga0207654_10121084
311 Ga0207695_10005762
312 Ga0207695_10013128
313 Ga0207671_10000543
314 Ga0207671_10008819
315 Ga0207693_10135144
316 Ga0207657_10083631
317 Ga0207694_10048735
318 Ga0207694_10052220
319 Ga0207700_10019834
320 Ga0207664_10036788
321 Ga0207690_10026661
322 Ga0207667_10013383
323 Ga0207667_10036674
324 Ga0207668_10000451
325 Ga0207640_10009632
326 Ga0207640_10034809
327 Ga0207658_10005372
328 Ga0207639_10075241
329 Ga0207639_10089035
330 Ga0207678_10057395
331 Ga0207702_10021060
332 Ga0207698_10029287
333 Ga0207698_10104446
334 Ga0209371_1000064
335 Ga0209371_1000163
336 Ga0209371_1001011
337 Ga0209813_10005457
338 Ga0268266_10071403
339 Ga0268265_10055539
340 Ga0268264_10000279
341 Ga0307517_10003773
342 Ga0307515_10001972
343 Ga0268256_1000028
344 Ga0268256_1000309
345 Ga0307511_10000047
346 Ga0307512_10001903
347 Ga0307513_10006352
348 Ga0307513_10057195
349 Ga0307509_10043035
350 Ga0307509_10249453
351 Ga0307509_10355372
352 Ga0307508_10001426
353 Ga0307508_10009123
354 Ga0307508_10040257
355 Ga0316575_10009789
356 Ga0316579_10010892
357 Ga0316576_10006270
358 Ga0316576_10247786
359 Ga0316578_10034398
360 Ga0316578_10063900
361 Ga0307516_10003172
362 Ga0307516_10007850
363 Ga0307516_10113311
364 Ga0307516_10117475
365 Ga0307518_10135791
366 Ga0316585_10015259
367 Ga0316580_10005758
368 Ga0307507_10010621
369 Ga0307510_10007245
370 Ga0307510_10028365
371 Ga0307510_10185769
372 Ga0373942_0000701
373 Ga0316574_0179179
374 Ga0316582_0094487
375 Ga0316584_0064664
376 Ga0395900_0184523
377 Ga0316581_0002861
378 Ga0436361_0400618
379 Ga0436361_1050371
380 Ga0451845_0046547
381 Ga0439449_0050709
382 Ga0439455_0003480
383 Ga0450903_000048
384 Ga0450907_007803
385 Ga0439458_0002588
386 Ga0451577_0008032
387 Ga0453683_0011067
388 Ga0466965_0005057
389 Ga0466961_0026215
390 Ga0466963_0001171
391 Ga0466964_0004589
392 Ga0453684_0040096
393 Ga0466971_0000564
394 Ga0466971_0039488
395 Ga0466970_0001200
396 Ga0466959_0016244
397 Ga0451576_0355603
398 Ga0466958_0000065
399 Ga0466967_0092406
400 Ga0495592_0050205
401 Ga0495592_0052506
402 Ga0495592_0142941
403 Ga0495629_0016509
404 Ga0495629_0053875
405 Ga0495629_0105456
406 Ga0495641_0000016
407 Ga0495651_0096231
408 Ga0495653_0043861
409 Ga0495650_0000135
410 Ga0495639_0009991
411 Ga0495662_0001353
412 Ga0495662_0002620
413 Ga0495662_0008894
414 Ga0495664_0000236
415 Ga0495608_0005901
416 Ga0495618_0006683
417 Ga0495618_0039518
418 Ga0495618_0136950
419 Ga0495628_0055932
420 Ga0495630_0059635
421 Ga0495630_0120408
422 Ga0495630_0214573
423 Ga0495632_0029586
424 Ga0495632_0043355
425 Ga0495643_0030992
426 Ga0495652_0002869
427 Ga0495652_0014639
428 Ga0495652_0096992
429 Ga0495586_0102436
430 Ga0495587_0001199
431 Ga0495645_0026498
432 Ga0495634_0000597
433 Ga0495634_0005106
434 Ga0495635_0000810
435 Ga0495588_0000877
436 Ga0495588_0008242
437 Ga0495657_0003469
438 Ga0495657_0005545
439 Ga0495657_0031374
440 Ga0495599_0001728
441 Ga0495646_0000142
442 Ga0495646_0019635
443 Ga0495658_0082889
444 Ga0495613_0000319
445 Ga0495613_0042311
446 Ga0495613_0043296
447 Ga0495624_0000100
448 Ga0495670_0037000
449 Ga0495671_0030559
450 Ga0495600_0037586
451 Ga0495581_0011088
452 Ga0495604_0001916
453 Ga0495674_0019336
454 Ga0495674_0055515
455 Ga0495676_0000151
456 Ga0495676_0046469
457 Ga0495676_0061033
458 Ga0495676_0101605
459 Ga0495680_0067554
460 Ga0495687_002234
461 Ga0495687_011904
462 Ga0495675_0075583
463 Ga0495675_0113750
464 Ga0495685_012193
465 Ga0495681_0003059
466 Ga0495681_0004925
467 Ga0495593_0001745
468 Ga0495602_0000869
469 Ga0495602_0005718
470 Ga0495602_0269012
471 Ga0495614_0019458
472 Ga0496101_0231066
473 Ga0496109_0052756
474 Ga0496124_0044163
475 Ga0501034_0028961
476 nmdc:mga0yw44_98869_c1
477 nmdc:mga0k408_65813_c1
478 nmdc:mga06z11_706_c1
479 nmdc:mga07m45_21409_c1
480 nmdc:mga05p37_245790_c1
481 Ga0495655_0036842
482 Ga0500578_0044463
483 Ga0500640_001373
484 Ga0500562_019741
485 Ga0500594_0006062
486 Ga0500652_012915
487 Ga0500658_0012564
488 Ga0500573_0030831
489 Ga0500600_0030503
490 Ga0500616_0094345
491 Ga0500634_0010265
492 Ga0466962_0014347
493 2585306558
494 2599329976
495 2644440746
496 2644630264
497 2785366653
498 2786667726
499 2806065730
500 2808845536
501 2808919568
502 2867431984
503 2877683895
504 2904436986
505 2946079351
506 2954389178
507 2954673866
508 2954690125
509 2954699936
510 2954702261
511 2954718804
512 2954728773
513 2954733037
514 2954747673
515 2954751917
516 2954766795

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

5

256

0.86

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

6

191

0.82

PF05368

NmrA

NmrA-like family

5

128

0.81

PF07993

NAD_binding_4

Male sterility protein

7

232

0.77

PF13460

NAD_binding_10

NAD(P)H-binding

9

190

0.74

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

6

251

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r1u-assembly2.cif.gz_B crystal structure of medicago truncatula cinnamoyl-coa reductase 0.9097 2 344
4r1u-assembly1.cif.gz_A crystal structure of medicago truncatula cinnamoyl-coa reductase 0.9063 2 344
5tqm-assembly2.cif.gz_B cinnamoyl-coa reductase 1 from sorghum bicolor in complex with nadp+ 0.9031 2 344
4r1s-assembly2.cif.gz_B crystal structure of petunia hydrida cinnamoyl-coa reductase 0.9013 2 342
4quk-assembly1.cif.gz_A crystal structure of cinnamyl-alcohol dehydrogenase 2 mutant k169a 0.9009 1 345
ID Description Score Start End Superfamily
af_A0A1D6H4Q8_14_113_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9449 1 91 3.40.50.720
af_Q69U05_2_321_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9266 2 342 3.40.50.720
af_B0G160_35_582_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9265 2 33 3.50.50.60
af_I1LPA3_21_339_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9207 1 344 3.40.50.720
af_A0A0R0HWA9_4_130_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9203 2 123 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4S9JN91-F1-model_v4 Cinnamoyl-CoA reductase 0.9932 2 170 GO:0016616
AF-A0A0Q0CZF2-F1-model_v4 Cinnamyl-alcohol dehydrogenase-like protein 0.9876 2 274 GO:0016616
AF-A0A3F3RDD4-F1-model_v4 deleted 0.9872 2 170
AF-A0A5C8A5Z0-F1-model_v4 deleted 0.9807 2 127
AF-G2XRV0-F1-model_v4 Similar to 3-beta hydroxysteroid dehydrogenase/isomerase family protein 0.9806 2 230 GO:0016616
GO:0016853

Map