F367809

General Info

Members Datasets Scaffolds Average Seq Length
258 201 238 249

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10000089|Ga0070658_1000008910
Length 302
Sequence MKDFSFTNFGGCATLKLATFAAIHNAIMGHVYHPADPLPMSDSTYWANPVRSAKWVIVKSILITGGSRGIGRATALRVAREGWAVAINYLRDAEAARETAMMAEQAGGRAMAVQGDVAIETDVIAMFDAAQADFGRLDGVVINAGIVAPPLPLADISADRLKRIFETNVYGAYLCAREAARRLRLNGQGGAVVIVSSAAARLGSPFEYVDYAGSKAALDALTIGLSKELGRDGVRVNAVRPGLIDTDIHASGGQPDRAHRLGQETPMGRCRRPEEVAEAIAWLLSDAASYVTGSILDVAGGR

Samples

Sample ID Description Type Environment
1 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
2 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
3 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
4 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
5 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
6 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
7 2765235841 Pseudomonas putida AA7 Isolate Unclassified
8 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
9 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
10 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
11 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
12 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
13 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
14 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
15 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
16 3007315729 Pseudomonas argentinensis SA190 Isolate Unclassified
17 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
80 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
81 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
84 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
85 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
86 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
103 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
104 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
105 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
106 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
107 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
108 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
116 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
117 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
123 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
124 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
125 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
128 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
131 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
136 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
137 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
138 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
141 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
142 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
143 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
144 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
145 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
146 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
147 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
150 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
151 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
154 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
155 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
156 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
157 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
158 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
162 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
163 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
164 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
165 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
166 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
167 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
168 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
169 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
170 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
171 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
172 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
173 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
174 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
175 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
178 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
179 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
180 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
181 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
182 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
183 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
184 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
185 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
189 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
192 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
193 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
194 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
197 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
198 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
199 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
200 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
201 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.25
Metatranscriptomes 0
Isolates 7.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.36
Nodule 0.78
Rhizoplane 8.91
Rhizosphere 68.99
Stem 0
Stem Tuber 0
Unclassified 13.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10001977 3300003215 Bacteria 12151
2 rootH2_10017122 3300003320 Bacteria 6354
3 rootL2_10000506 3300003322 Bacteria 2834
4 rootL2_10087643 3300003322 Unclassified 3395
5 rootL2_10146728 3300003322 Bacteria 1547
6 rootL2_10272933 3300003322 Bacteria 2124
7 rootH1_10003462 3300003323 Bacteria 37989
8 rootH1_10158508 3300003323 Bacteria 1941
9 rootH1_10219853 3300003323 Bacteria 1261
10 JGI25160J50197_1001398 3300003354 Bacteria 12123
11 Ga0065165_1001568 3300005262 Bacteria 23601
12 Ga0070658_10000089 3300005327 Bacteria 83791
13 Ga0070682_100388238 3300005337 Bacteria 1052
14 Ga0070667_100041904 3300005367 Bacteria 3840
15 Ga0070709_10000190 3300005434 Bacteria 39022
16 Ga0070714_100482561 3300005435 Bacteria 1180
17 Ga0070713_100000600 3300005436 Bacteria 22932
18 Ga0070700_100331934 3300005441 Bacteria 1121
19 Ga0070697_100000882 3300005536 Bacteria 22548
20 Ga0070672_100180913 3300005543 Unclassified 1757
21 Ga0070695_100122516 3300005545 Bacteria 1781
22 Ga0070665_100233636 3300005548 Bacteria 1839
23 Ga0068857_100176346 3300005577 Bacteria 1944
24 Ga0068856_100735704 3300005614 Bacteria 1006
25 Ga0070716_100001359 3300006173 Bacteria 10850
26 Ga0070712_100000466 3300006175 Bacteria 23276
27 Ga0075366_10021859 3300006195 Bacteria 3719
28 Ga0075366_10152201 3300006195 Bacteria 1401
29 Ga0075370_10056406 3300006353 Bacteria 2233
30 Ga0068871_100425669 3300006358 Bacteria 1186
31 Ga0075435_100629430 3300007076 Bacteria 931
32 Ga0105251_10014132 3300009011 Bacteria 4430
33 Ga0105240_10081143 3300009093 Bacteria 3986
34 Ga0105240_10123051 3300009093 Bacteria 3122
35 Ga0105245_10262332 3300009098 Bacteria 1682
36 Ga0105247_10059831 3300009101 Bacteria 2359
37 Ga0114129_10484080 3300009147 Bacteria 1619
38 Ga0105248_10019259 3300009177 Bacteria 7552
39 Ga0105248_10432084 3300009177 Bacteria 1483
40 Ga0157369_10004339 3300013105 Bacteria 16740
41 Ga0163162_10006007 3300013306 Bacteria 11753
42 Ga0163162_10053749 3300013306 Bacteria 4048
43 Ga0157375_10020258 3300013308 Bacteria 6072
44 Ga0163163_10174711 3300014325 Bacteria 2194
45 Ga0157379_10060333 3300014968 Bacteria 3391
46 Ga0157379_10177412 3300014968 Bacteria 1924
47 Ga0157379_10541062 3300014968 Bacteria 1083
48 Ga0183361_10010 3300016635 Bacteria 204902
49 Ga0163161_10339849 3300017792 Bacteria 1191
50 Ga0209564_1024517 3300025295 Bacteria 2059
51 Ga0209758_1000220 3300025297 Bacteria 123972
52 Ga0207426_1000168 3300025302 Bacteria 165214
53 Ga0207680_10067424 3300025903 Bacteria 2204
54 Ga0207699_10007755 3300025906 Bacteria 5255
55 Ga0207705_10000140 3300025909 Bacteria 78223
56 Ga0207695_10309543 3300025913 Bacteria 1470
57 Ga0207693_10000080 3300025915 Bacteria 86060
58 Ga0207663_10007829 3300025916 Bacteria 5565
59 Ga0207700_10000649 3300025928 Bacteria 20332
60 Ga0207664_10427755 3300025929 Bacteria 1180
61 Ga0207704_10108982 3300025938 Bacteria 1867
62 Ga0207711_10158766 3300025941 Bacteria 2045
63 Ga0207658_10086988 3300025986 Bacteria 2412
64 Ga0207702_10687204 3300026078 Bacteria 1008
65 Ga0207428_10088512 3300027907 Bacteria 2408
66 Ga0268265_10347695 3300028380 Bacteria 1353
67 Ga0265326_10004794 3300028558 Bacteria 4294
68 Ga0265319_1007120 3300028563 Bacteria 5071
69 Ga0265334_10001422 3300028573 Bacteria 11513
70 Ga0265318_10000666 3300028577 Bacteria 23403
71 Ga0307517_10143120 3300028786 Bacteria 1670
72 Ga0307515_10099912 3300028794 Bacteria 3519
73 Ga0265338_10000557 3300028800 Bacteria 65338
74 Ga0265338_10022582 3300028800 Bacteria 6506
75 Ga0265338_10253277 3300028800 Bacteria 1298
76 Ga0265330_10017683 3300031235 Bacteria 3281
77 Ga0265332_10004485 3300031238 Bacteria 6543
78 Ga0265332_10091555 3300031238 Bacteria 1285
79 Ga0265328_10091381 3300031239 Bacteria 1124
80 Ga0265325_10010613 3300031241 Bacteria 5324
81 Ga0265329_10003485 3300031242 Bacteria 6837
82 Ga0265340_10093968 3300031247 Bacteria 1399
83 Ga0265339_10042597 3300031249 Bacteria 2513
84 Ga0265331_10051302 3300031250 Bacteria 1974
85 Ga0265331_10108809 3300031250 Bacteria 1272
86 Ga0265316_10144000 3300031344 Bacteria 1788
87 Ga0307513_10132783 3300031456 Bacteria 2431
88 Ga0265314_10014297 3300031711 Bacteria 6361
89 Ga0265342_10008515 3300031712 Bacteria 7345
90 Ga0307516_10001925 3300031730 Bacteria 28437
91 Ga0307516_10144207 3300031730 Bacteria 2148
92 Ga0307413_10126737 3300031824 Bacteria 1740
93 Ga0307410_10292473 3300031852 Bacteria 1282
94 Ga0307406_10212834 3300031901 Bacteria 1431
95 Ga0307416_100171523 3300032002 Bacteria 2020
96 Ga0307414_10011316 3300032004 Bacteria 5228
97 Ga0307411_10091590 3300032005 Bacteria 2124
98 Ga0307411_10504814 3300032005 Bacteria 1023
99 Ga0395900_0196724 3300037418 Bacteria 2042
100 Ga0395898_0001881 3300037466 Bacteria 26788
101 Ga0395905_0000012 3300037471 Bacteria 420861
102 Ga0395901_0724798 3300038443 Bacteria 990
103 Ga0400483_162223 3300039062 Bacteria 1040
104 Ga0439438_091509 3300041405 Bacteria 740
105 Ga0451793_0427178 3300041452 Bacteria 3402
106 Ga0439432_022617 3300042006 Bacteria 2076
107 Ga0439446_0000177 3300042156 Bacteria 11208
108 Ga0466972_0013828 3300044658 Bacteria 4050
109 Ga0466965_0022460 3300044683 Bacteria 3041
110 Ga0466966_0073561 3300044684 Bacteria 2137
111 Ga0466961_0001163 3300044693 Bacteria 16194
112 Ga0466968_0035763 3300044735 Bacteria 2079
113 Ga0466959_0002519 3300045049 Bacteria 11745
114 Ga0466959_0004544 3300045049 Bacteria 9306
115 Ga0466958_0006356 3300045836 Bacteria 6425
116 Ga0495592_0001317 3300046454 Bacteria 17228
117 Ga0495603_0000924 3300046455 Bacteria 16860
118 Ga0495603_0017279 3300046455 Bacteria 4367
119 Ga0495603_0038082 3300046455 Bacteria 2885
120 Ga0495590_0013348 3300046457 Bacteria 3023
121 Ga0495590_0040649 3300046457 Bacteria 1622
122 Ga0495591_023789 3300046458 Bacteria 1955
123 Ga0495629_0000774 3300046459 Bacteria 25829
124 Ga0495638_0004983 3300046460 Bacteria 9959
125 Ga0495638_0136068 3300046460 Bacteria 1439
126 Ga0495653_0201315 3300046463 Bacteria 1351
127 Ga0495650_0002070 3300046471 Bacteria 17390
128 Ga0495650_0058035 3300046471 Bacteria 1564
129 Ga0495580_0008325 3300046472 Bacteria 8248
130 Ga0495580_0013673 3300046472 Bacteria 6186
131 Ga0495582_0012297 3300046473 Bacteria 4715
132 Ga0495605_0014812 3300046474 Bacteria 4256
133 Ga0495639_0179240 3300046475 Bacteria 1031
134 Ga0495664_0032239 3300046477 Bacteria 3074
135 Ga0495585_0110593 3300046492 Bacteria 1461
136 Ga0495583_0016365 3300046506 Bacteria 3989
137 Ga0495606_0123702 3300046507 Bacteria 1545
138 Ga0495616_0058182 3300046513 Bacteria 1904
139 Ga0495620_0043477 3300046515 Bacteria 1957
140 Ga0495628_0017092 3300046516 Bacteria 6044
141 Ga0495630_0055677 3300046517 Bacteria 2964
142 Ga0495632_0002791 3300046519 Bacteria 12946
143 Ga0495666_0087152 3300046526 Bacteria 1475
144 Ga0495642_0081672 3300046528 Bacteria 1362
145 Ga0495642_0087113 3300046528 Bacteria 1319
146 Ga0495654_0018564 3300046530 Bacteria 3643
147 Ga0495665_0022130 3300046531 Bacteria 3418
148 Ga0495640_0030966 3300046533 Bacteria 3824
149 Ga0495586_0184011 3300046535 Bacteria 1182
150 Ga0495621_0155737 3300046539 Bacteria 901
151 Ga0495645_0007762 3300046543 Bacteria 7461
152 Ga0495622_0066779 3300046557 Bacteria 1662
153 Ga0495634_0054779 3300046642 Bacteria 2668
154 Ga0495634_0122471 3300046642 Bacteria 1665
155 Ga0495611_0031701 3300046648 Bacteria 2328
156 Ga0495611_0070970 3300046648 Bacteria 1592
157 Ga0495623_0078859 3300046679 Bacteria 2041
158 Ga0495646_0107299 3300046680 Bacteria 1593
159 Ga0495658_0208088 3300046683 Bacteria 1221
160 Ga0495658_0289620 3300046683 Bacteria 1034
161 Ga0495669_0029206 3300046684 Bacteria 2417
162 Ga0495669_0101940 3300046684 Bacteria 1334
163 Ga0495670_0047586 3300046691 Bacteria 2144
164 Ga0495671_0018661 3300046692 Bacteria 3678
165 Ga0495671_0077998 3300046692 Bacteria 1624
166 Ga0495649_0008350 3300046694 Bacteria 6232
167 Ga0495649_0231328 3300046694 Bacteria 954
168 Ga0495589_0026608 3300046794 Bacteria 2929
169 Ga0495589_0146817 3300046794 Bacteria 1127
170 Ga0495600_0082481 3300046809 Bacteria 2098
171 Ga0495581_0001974 3300047315 Bacteria 11503
172 Ga0495674_0008236 3300047319 Bacteria 9946
173 Ga0495674_0013834 3300047319 Bacteria 7574
174 Ga0495672_0006220 3300047320 Bacteria 9310
175 Ga0495672_0013349 3300047320 Bacteria 5672
176 Ga0495683_0012429 3300047323 Bacteria 4468
177 Ga0495683_0052255 3300047323 Bacteria 2040
178 Ga0495683_0094050 3300047323 Bacteria 1448
179 Ga0495687_037270 3300047443 Bacteria 2167
180 Ga0495687_040489 3300047443 Bacteria 2052
181 Ga0495675_0061691 3300047444 Bacteria 2375
182 Ga0495675_0081614 3300047444 Bacteria 2036
183 Ga0495681_0071626 3300047470 Bacteria 1569
184 Ga0495686_0000032 3300047472 Bacteria 345132
185 Ga0495593_0018621 3300047673 Bacteria 3901
186 Ga0495626_0092222 3300048091 Bacteria 1331
187 Ga0496100_0000791 3300048903 Bacteria 15063
188 Ga0496100_0062130 3300048903 Bacteria 2464
189 Ga0496101_0005842 3300048904 Bacteria 7871
190 Ga0496101_0304202 3300048904 Bacteria 1249
191 Ga0496102_0008235 3300048905 Bacteria 8926
192 Ga0496102_0023086 3300048905 Bacteria 5520
193 Ga0496103_0002256 3300048906 Bacteria 12202
194 Ga0496104_0244859 3300048907 Bacteria 1705
195 Ga0496105_0040038 3300048908 Bacteria 3863
196 Ga0496105_0088946 3300048908 Bacteria 2551
197 Ga0496106_0000053 3300048909 Bacteria 93929
198 Ga0496106_0192651 3300048909 Bacteria 1621
199 Ga0496107_0037941 3300048910 Bacteria 3458
200 Ga0496110_0277457 3300048913 Bacteria 1526
201 Ga0496110_0550224 3300048913 Bacteria 1049
202 Ga0496112_0011544 3300048915 Bacteria 8074
203 Ga0496113_0024627 3300048916 Bacteria 4280
204 Ga0496114_0001299 3300048917 Bacteria 18897
205 Ga0496114_0316856 3300048917 Bacteria 1378
206 Ga0496114_0488627 3300048917 Bacteria 1089
207 Ga0496115_0025883 3300048918 Bacteria 4572
208 Ga0496115_0144738 3300048918 Bacteria 1961
209 Ga0496116_0149989 3300048919 Bacteria 1297
210 Ga0496117_0001682 3300048920 Bacteria 30850
211 Ga0496117_0002599 3300048920 Bacteria 22450
212 Ga0496117_0050243 3300048920 Bacteria 2958
213 Ga0496118_0005567 3300048921 Bacteria 14267
214 Ga0496118_0011356 3300048921 Bacteria 8705
215 Ga0496118_0035028 3300048921 Bacteria 4084
216 Ga0496119_0003411 3300048922 Bacteria 16508
217 Ga0496119_0221361 3300048922 Bacteria 968
218 Ga0496121_0000585 3300048924 Bacteria 68389
219 Ga0496121_0003743 3300048924 Bacteria 21303
220 Ga0496121_0016230 3300048924 Bacteria 7706
221 Ga0496122_0043025 3300048925 Bacteria 3544
222 Ga0496126_0000034 3300048929 Bacteria 362440
223 Ga0496126_0006736 3300048929 Bacteria 12756
224 Ga0496126_0104365 3300048929 Bacteria 2476
225 Ga0501031_0081987 3300049568 Bacteria 2103
226 Ga0501040_0338223 3300049576 Bacteria 1078
227 Ga0501047_0055274 3300049581 Bacteria 3839
228 nmdc:mga0yw44_121572_c1 3300050492 Bacteria 1682
229 nmdc:mga0k408_14921_c1 3300050493 Bacteria 4290
230 nmdc:mga08y16_32036_c1 3300050511 Bacteria 5528
231 Ga0500578_0001033 3300053086 Bacteria 30501
232 Ga0500628_002746 3300053129 Bacteria 2897
233 Ga0500642_0007835 3300053130 Bacteria 3614
234 Ga0500642_0077263 3300053130 Bacteria 1524
235 Ga0500652_000136 3300053131 Bacteria 27649
236 Ga0500616_0130631 3300053153 Bacteria 1187
237 Ga0500619_131899 3300053154 Bacteria 852
238 Ga0500622_0000149 3300053156 Bacteria 73646

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009177 Ga0105248_10432084 Ga0105248_104320842 208
2 3300025941 Ga0207711_10158766 Ga0207711_101587662 208
3 3300053154 Ga0500619_131899 Ga0500619_131899_98_760 220
4 3300005545 Ga0070695_100122516 Ga0070695_1001225163 223
5 3300039062 Ga0400483_162223 Ga0400483_162223_40_723 227
6 3300041405 Ga0439438_091509 Ga0439438_091509_40_726 228
7 3300053086 Ga0500578_0001033 Ga0500578_0001033_3525_4343 229
8 3300049568 Ga0501031_0081987 Ga0501031_0081987_1145_1888 237
9 3300005536 Ga0070697_100000882 Ga0070697_1000008829 239
10 iso_pu_bacteria 640427133 640487721 240
11 3300005441 Ga0070700_100331934 Ga0070700_1003319342 243
12 3300007076 Ga0075435_100629430 Ga0075435_1006294301 243
13 3300027907 Ga0207428_10088512 Ga0207428_100885124 243
14 3300046454 Ga0495592_0001317 Ga0495592_0001317_12101_12832 243
15 3300046473 Ga0495582_0012297 Ga0495582_0012297_1586_2317 243
16 3300046517 Ga0495630_0055677 Ga0495630_0055677_821_1552 243
17 3300046526 Ga0495666_0087152 Ga0495666_0087152_243_974 243
18 3300046533 Ga0495640_0030966 Ga0495640_0030966_2781_3512 243
19 3300046642 Ga0495634_0054779 Ga0495634_0054779_1368_2099 243
20 3300046642 Ga0495634_0122471 Ga0495634_0122471_490_1221 243
21 3300046683 Ga0495658_0208088 Ga0495658_0208088_212_943 243
22 3300046683 Ga0495658_0289620 Ga0495658_0289620_255_986 243
23 3300047444 Ga0495675_0081614 Ga0495675_0081614_297_1028 243
24 3300050511 nmdc:mga08y16_32036_c1 nmdc:mga08y16_32036_c1_447_1178 243
25 iso_pu_bacteria 2511231027 2511390827 243
26 iso_pu_bacteria 2791355137 2792833773 243
27 iso_pu_bacteria 2842871566 2842873470 243
28 iso_pu_bacteria 2894652903 2894655369 243
29 iso_pu_bacteria 2904615490 2904619725 243
30 iso_pu_bacteria 2928521798 2928521954 243
31 iso_pu_bacteria 2954011201 2954014688 243
32 3300042156 Ga0439446_0000177 Ga0439446_0000177_5929_6663 244
33 iso_pu_bacteria 2513237166 2514048563 244
34 iso_pu_bacteria 2562617112 2563062512 244
35 iso_pu_bacteria 2711768613 2713477630 244
36 iso_pu_bacteria 2765235841 2765584488 244
37 iso_pu_bacteria 2808606379 2808939169 244
38 iso_pu_bacteria 3007315729 3007317707 244
39 iso_pu_bacteria 642555112 642593826 244
40 iso_pu_bacteria 651053060 651175656 244
41 iso_pu_bacteria 8054929484 8054932855 244
42 3300003322 rootL2_10146728 rootL2_101467282 245
43 3300006358 Ga0068871_100425669 Ga0068871_1004256692 245
44 3300025938 Ga0207704_10108982 Ga0207704_101089822 245
45 3300044658 Ga0466972_0013828 Ga0466972_0013828_393_1130 245
46 3300044683 Ga0466965_0022460 Ga0466965_0022460_437_1174 245
47 3300044684 Ga0466966_0073561 Ga0466966_0073561_812_1549 245
48 3300044693 Ga0466961_0001163 Ga0466961_0001163_2959_3696 245
49 3300044735 Ga0466968_0035763 Ga0466968_0035763_493_1230 245
50 3300045049 Ga0466959_0004544 Ga0466959_0004544_4838_5575 245
51 3300045836 Ga0466958_0006356 Ga0466958_0006356_4316_5053 245
52 3300049576 Ga0501040_0338223 Ga0501040_0338223_193_930 245
53 3300005327 Ga0070658_10000089 Ga0070658_1000008910 246
54 3300025909 Ga0207705_10000140 Ga0207705_1000014019 246
55 3300049581 Ga0501047_0055274 Ga0501047_0055274_1794_2546 246
56 iso_pu_bacteria 2837651117 2837651235 246
57 3300005435 Ga0070714_100482561 Ga0070714_1004825612 247
58 3300009101 Ga0105247_10059831 Ga0105247_100598311 247
59 3300025929 Ga0207664_10427755 Ga0207664_104277552 247
60 3300028558 Ga0265326_10004794 Ga0265326_100047944 247
61 3300028563 Ga0265319_1007120 Ga0265319_10071203 247
62 3300028573 Ga0265334_10001422 Ga0265334_100014222 247
63 3300028577 Ga0265318_10000666 Ga0265318_1000066610 247
64 3300028800 Ga0265338_10022582 Ga0265338_100225823 247
65 3300028800 Ga0265338_10253277 Ga0265338_102532772 247
66 3300031235 Ga0265330_10017683 Ga0265330_100176833 247
67 3300031238 Ga0265332_10004485 Ga0265332_100044853 247
68 3300031239 Ga0265328_10091381 Ga0265328_100913812 247
69 3300031241 Ga0265325_10010613 Ga0265325_100106132 247
70 3300031242 Ga0265329_10003485 Ga0265329_100034856 247
71 3300031247 Ga0265340_10093968 Ga0265340_100939682 247
72 3300031249 Ga0265339_10042597 Ga0265339_100425972 247
73 3300031250 Ga0265331_10051302 Ga0265331_100513022 247
74 3300031250 Ga0265331_10108809 Ga0265331_101088091 247
75 3300031344 Ga0265316_10144000 Ga0265316_101440002 247
76 3300031711 Ga0265314_10014297 Ga0265314_100142974 247
77 3300031712 Ga0265342_10008515 Ga0265342_100085152 247
78 3300032004 Ga0307414_10011316 Ga0307414_100113161 247
79 3300032005 Ga0307411_10504814 Ga0307411_105048142 247
80 3300037418 Ga0395900_0196724 Ga0395900_0196724_145_888 247
81 3300037466 Ga0395898_0001881 Ga0395898_0001881_19486_20229 247
82 3300038443 Ga0395901_0724798 Ga0395901_0724798_40_783 247
83 3300048922 Ga0496119_0003411 Ga0496119_0003411_3922_4665 247
84 3300050492 nmdc:mga0yw44_121572_c1 nmdc:mga0yw44_121572_c1_526_1269 247
85 3300003320 rootH2_10017122 rootH2_100171224 248
86 3300003322 rootL2_10000506 rootL2_100005063 248
87 3300003322 rootL2_10087643 rootL2_100876433 248
88 3300003322 rootL2_10272933 rootL2_102729332 248
89 3300003323 rootH1_10003462 rootH1_1000346226 248
90 3300003323 rootH1_10158508 rootH1_101585082 248
91 3300003323 rootH1_10219853 rootH1_102198531 248
92 3300003354 JGI25160J50197_1001398 JGI25160J50197_10013989 248
93 3300005262 Ga0065165_1001568 Ga0065165_100156820 248
94 3300005337 Ga0070682_100388238 Ga0070682_1003882381 248
95 3300005367 Ga0070667_100041904 Ga0070667_1000419042 248
96 3300005548 Ga0070665_100233636 Ga0070665_1002336363 248
97 3300005577 Ga0068857_100176346 Ga0068857_1001763461 248
98 3300005614 Ga0068856_100735704 Ga0068856_1007357042 248
99 3300006195 Ga0075366_10152201 Ga0075366_101522012 248
100 3300009011 Ga0105251_10014132 Ga0105251_100141322 248
101 3300009093 Ga0105240_10123051 Ga0105240_101230513 248
102 3300009098 Ga0105245_10262332 Ga0105245_102623322 248
103 3300009147 Ga0114129_10484080 Ga0114129_104840801 248
104 3300009177 Ga0105248_10019259 Ga0105248_100192598 248
105 3300013105 Ga0157369_10004339 Ga0157369_100043395 248
106 3300013306 Ga0163162_10006007 Ga0163162_1000600711 248
107 3300013306 Ga0163162_10053749 Ga0163162_100537494 248
108 3300013308 Ga0157375_10020258 Ga0157375_100202587 248
109 3300014325 Ga0163163_10174711 Ga0163163_101747112 248
110 3300014968 Ga0157379_10177412 Ga0157379_101774123 248
111 3300014968 Ga0157379_10541062 Ga0157379_105410622 248
112 3300016635 Ga0183361_10010 Ga0183361_10010143 248
113 3300017792 Ga0163161_10339849 Ga0163161_103398491 248
114 3300025295 Ga0209564_1024517 Ga0209564_10245172 248
115 3300025302 Ga0207426_1000168 Ga0207426_1000168139 248
116 3300025903 Ga0207680_10067424 Ga0207680_100674243 248
117 3300025986 Ga0207658_10086988 Ga0207658_100869883 248
118 3300026078 Ga0207702_10687204 Ga0207702_106872042 248
119 3300028380 Ga0268265_10347695 Ga0268265_103476951 248
120 3300028794 Ga0307515_10099912 Ga0307515_100999123 248
121 3300028800 Ga0265338_10000557 Ga0265338_1000055759 248
122 3300031238 Ga0265332_10091555 Ga0265332_100915552 248
123 3300031824 Ga0307413_10126737 Ga0307413_101267372 248
124 3300031852 Ga0307410_10292473 Ga0307410_102924732 248
125 3300031901 Ga0307406_10212834 Ga0307406_102128342 248
126 3300032002 Ga0307416_100171523 Ga0307416_1001715233 248
127 3300032005 Ga0307411_10091590 Ga0307411_100915902 248
128 3300037471 Ga0395905_0000012 Ga0395905_0000012_10592_11338 248
129 3300042006 Ga0439432_022617 Ga0439432_022617_126_920 248
130 3300045049 Ga0466959_0002519 Ga0466959_0002519_6074_6820 248
131 3300046455 Ga0495603_0000924 Ga0495603_0000924_11487_12233 248
132 3300046455 Ga0495603_0017279 Ga0495603_0017279_2338_3084 248
133 3300046455 Ga0495603_0038082 Ga0495603_0038082_477_1223 248
134 3300046457 Ga0495590_0013348 Ga0495590_0013348_1318_2064 248
135 3300046457 Ga0495590_0040649 Ga0495590_0040649_432_1178 248
136 3300046458 Ga0495591_023789 Ga0495591_023789_313_1059 248
137 3300046459 Ga0495629_0000774 Ga0495629_0000774_15229_15975 248
138 3300046460 Ga0495638_0004983 Ga0495638_0004983_8787_9533 248
139 3300046463 Ga0495653_0201315 Ga0495653_0201315_138_884 248
140 3300046471 Ga0495650_0002070 Ga0495650_0002070_15316_16062 248
141 3300046471 Ga0495650_0058035 Ga0495650_0058035_165_911 248
142 3300046472 Ga0495580_0008325 Ga0495580_0008325_6451_7197 248
143 3300046472 Ga0495580_0013673 Ga0495580_0013673_2382_3128 248
144 3300046474 Ga0495605_0014812 Ga0495605_0014812_2314_3060 248
145 3300046475 Ga0495639_0179240 Ga0495639_0179240_217_963 248
146 3300046477 Ga0495664_0032239 Ga0495664_0032239_752_1498 248
147 3300046492 Ga0495585_0110593 Ga0495585_0110593_375_1121 248
148 3300046506 Ga0495583_0016365 Ga0495583_0016365_2177_2923 248
149 3300046507 Ga0495606_0123702 Ga0495606_0123702_172_918 248
150 3300046513 Ga0495616_0058182 Ga0495616_0058182_234_980 248
151 3300046516 Ga0495628_0017092 Ga0495628_0017092_3702_4448 248
152 3300046528 Ga0495642_0087113 Ga0495642_0087113_385_1131 248
153 3300046530 Ga0495654_0018564 Ga0495654_0018564_1763_2509 248
154 3300046531 Ga0495665_0022130 Ga0495665_0022130_2100_2846 248
155 3300046535 Ga0495586_0184011 Ga0495586_0184011_97_843 248
156 3300046539 Ga0495621_0155737 Ga0495621_0155737_71_817 248
157 3300046543 Ga0495645_0007762 Ga0495645_0007762_3992_4738 248
158 3300046557 Ga0495622_0066779 Ga0495622_0066779_135_881 248
159 3300046648 Ga0495611_0031701 Ga0495611_0031701_1548_2294 248
160 3300046648 Ga0495611_0070970 Ga0495611_0070970_146_892 248
161 3300046679 Ga0495623_0078859 Ga0495623_0078859_958_1704 248
162 3300046680 Ga0495646_0107299 Ga0495646_0107299_822_1568 248
163 3300046684 Ga0495669_0029206 Ga0495669_0029206_1162_1908 248
164 3300046684 Ga0495669_0101940 Ga0495669_0101940_373_1119 248
165 3300046691 Ga0495670_0047586 Ga0495670_0047586_1088_1834 248
166 3300046692 Ga0495671_0018661 Ga0495671_0018661_2744_3490 248
167 3300046692 Ga0495671_0077998 Ga0495671_0077998_146_892 248
168 3300046694 Ga0495649_0008350 Ga0495649_0008350_4785_5531 248
169 3300046694 Ga0495649_0231328 Ga0495649_0231328_103_849 248
170 3300046794 Ga0495589_0026608 Ga0495589_0026608_1164_1910 248
171 3300046794 Ga0495589_0146817 Ga0495589_0146817_305_1051 248
172 3300046809 Ga0495600_0082481 Ga0495600_0082481_261_1007 248
173 3300047315 Ga0495581_0001974 Ga0495581_0001974_8454_9200 248
174 3300047319 Ga0495674_0008236 Ga0495674_0008236_7924_8670 248
175 3300047319 Ga0495674_0013834 Ga0495674_0013834_5901_6647 248
176 3300047320 Ga0495672_0006220 Ga0495672_0006220_1367_2113 248
177 3300047323 Ga0495683_0012429 Ga0495683_0012429_80_826 248
178 3300047323 Ga0495683_0052255 Ga0495683_0052255_48_794 248
179 3300047323 Ga0495683_0094050 Ga0495683_0094050_135_881 248
180 3300047443 Ga0495687_037270 Ga0495687_037270_540_1286 248
181 3300047443 Ga0495687_040489 Ga0495687_040489_65_811 248
182 3300047444 Ga0495675_0061691 Ga0495675_0061691_1244_1990 248
183 3300047470 Ga0495681_0071626 Ga0495681_0071626_13_759 248
184 3300047472 Ga0495686_0000032 Ga0495686_0000032_281550_282296 248
185 3300047673 Ga0495593_0018621 Ga0495593_0018621_2049_2795 248
186 3300048091 Ga0495626_0092222 Ga0495626_0092222_194_940 248
187 3300048903 Ga0496100_0000791 Ga0496100_0000791_6446_7192 248
188 3300048903 Ga0496100_0062130 Ga0496100_0062130_855_1601 248
189 3300048904 Ga0496101_0005842 Ga0496101_0005842_1771_2517 248
190 3300048904 Ga0496101_0304202 Ga0496101_0304202_171_917 248
191 3300048905 Ga0496102_0008235 Ga0496102_0008235_6399_7145 248
192 3300048905 Ga0496102_0023086 Ga0496102_0023086_2220_2966 248
193 3300048906 Ga0496103_0002256 Ga0496103_0002256_2181_2927 248
194 3300048907 Ga0496104_0244859 Ga0496104_0244859_752_1498 248
195 3300048908 Ga0496105_0040038 Ga0496105_0040038_1734_2480 248
196 3300048908 Ga0496105_0088946 Ga0496105_0088946_1217_1963 248
197 3300048909 Ga0496106_0000053 Ga0496106_0000053_15908_16654 248
198 3300048909 Ga0496106_0192651 Ga0496106_0192651_307_1053 248
199 3300048910 Ga0496107_0037941 Ga0496107_0037941_2065_2811 248
200 3300048913 Ga0496110_0277457 Ga0496110_0277457_387_1133 248
201 3300048913 Ga0496110_0550224 Ga0496110_0550224_217_963 248
202 3300048915 Ga0496112_0011544 Ga0496112_0011544_6444_7190 248
203 3300048916 Ga0496113_0024627 Ga0496113_0024627_1854_2600 248
204 3300048917 Ga0496114_0001299 Ga0496114_0001299_2736_3482 248
205 3300048917 Ga0496114_0316856 Ga0496114_0316856_489_1235 248
206 3300048917 Ga0496114_0488627 Ga0496114_0488627_154_900 248
207 3300048918 Ga0496115_0025883 Ga0496115_0025883_191_937 248
208 3300048919 Ga0496116_0149989 Ga0496116_0149989_297_1043 248
209 3300048920 Ga0496117_0001682 Ga0496117_0001682_10781_11527 248
210 3300048920 Ga0496117_0002599 Ga0496117_0002599_19923_20669 248
211 3300048920 Ga0496117_0050243 Ga0496117_0050243_967_1713 248
212 3300048921 Ga0496118_0005567 Ga0496118_0005567_7256_8002 248
213 3300048921 Ga0496118_0011356 Ga0496118_0011356_1653_2399 248
214 3300048921 Ga0496118_0035028 Ga0496118_0035028_2913_3659 248
215 3300048922 Ga0496119_0221361 Ga0496119_0221361_94_840 248
216 3300048924 Ga0496121_0000585 Ga0496121_0000585_50907_51653 248
217 3300048924 Ga0496121_0003743 Ga0496121_0003743_5247_5993 248
218 3300048924 Ga0496121_0016230 Ga0496121_0016230_6188_6934 248
219 3300048925 Ga0496122_0043025 Ga0496122_0043025_1689_2435 248
220 3300048929 Ga0496126_0000034 Ga0496126_0000034_303288_304034 248
221 3300048929 Ga0496126_0006736 Ga0496126_0006736_9085_9831 248
222 3300048929 Ga0496126_0104365 Ga0496126_0104365_1145_1891 248
223 3300053153 Ga0500616_0130631 Ga0500616_0130631_332_1078 248
224 3300005543 Ga0070672_100180913 Ga0070672_1001809132 250
225 3300005434 Ga0070709_10000190 Ga0070709_1000019012 252
226 3300005436 Ga0070713_100000600 Ga0070713_10000060011 252
227 3300006173 Ga0070716_100001359 Ga0070716_1000013599 252
228 3300006175 Ga0070712_100000466 Ga0070712_10000046616 252
229 3300014968 Ga0157379_10060333 Ga0157379_100603332 252
230 3300025906 Ga0207699_10007755 Ga0207699_100077552 252
231 3300025915 Ga0207693_10000080 Ga0207693_100000804 252
232 3300025916 Ga0207663_10007829 Ga0207663_100078295 252
233 3300025928 Ga0207700_10000649 Ga0207700_1000064917 252
234 3300031730 Ga0307516_10001925 Ga0307516_1000192524 252
235 3300046528 Ga0495642_0081672 Ga0495642_0081672_496_1305 252
236 3300047320 Ga0495672_0013349 Ga0495672_0013349_4170_4934 252
237 3300048918 Ga0496115_0144738 Ga0496115_0144738_266_1030 252
238 3300009093 Ga0105240_10081143 Ga0105240_100811433 253
239 3300025913 Ga0207695_10309543 Ga0207695_103095431 253
240 3300053129 Ga0500628_002746 Ga0500628_002746_1984_2760 253
241 iso_pu_bacteria 2585428058 2587735885 260
242 3300031730 Ga0307516_10144207 Ga0307516_101442072 261
243 3300041452 Ga0451793_0427178 Ga0451793_0427178_1991_2806 261
244 3300046460 Ga0495638_0136068 Ga0495638_0136068_340_1155 261
245 3300046515 Ga0495620_0043477 Ga0495620_0043477_926_1741 261
246 3300053130 Ga0500642_0007835 Ga0500642_0007835_659_1474 261
247 3300053131 Ga0500652_000136 Ga0500652_000136_24362_25177 261
248 3300053156 Ga0500622_0000149 Ga0500622_0000149_39660_40475 261
249 iso_pu_bacteria 2588253510 2588290474 261
250 3300006195 Ga0075366_10021859 Ga0075366_100218592 264
251 3300006353 Ga0075370_10056406 Ga0075370_100564062 264
252 3300046519 Ga0495632_0002791 Ga0495632_0002791_10036_10860 264
253 3300050493 nmdc:mga0k408_14921_c1 nmdc:mga0k408_14921_c1_1235_2059 264
254 3300003215 JGI25153J46596_10001977 JGI25153J46596_100019776 265
255 3300025297 Ga0209758_1000220 Ga0209758_100022070 265
256 3300028786 Ga0307517_10143120 Ga0307517_101431202 265
257 3300031456 Ga0307513_10132783 Ga0307513_101327833 265
258 3300053130 Ga0500642_0077263 Ga0500642_0077263_668_1489 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

59

256

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

65

302

0.94

PF08659

KR

KR domain

60

240

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iqg-assembly1.cif.gz_B crystal structure of bpro0239 oxidoreductase from polaromonas sp. js666 in nadp bound form 0.9953 20 265
4e3z-assembly1.cif.gz_B crystal structure of a oxidoreductase from rhizobium etli cfn 42 0.9907 20 265
8bcj-assembly2.cif.gz_D crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 in complex with nadp+ 0.9903 20 265
8bci-assembly2.cif.gz_C crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 0.9889 20 265
4e3z-assembly1.cif.gz_A crystal structure of a oxidoreductase from rhizobium etli cfn 42 0.9883 20 265
ID Description Score Start End Superfamily
4jigA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9838 20 265 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9642 18 264 3.40.50.720
4jigA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9633 20 265 3.40.50.720
4hsyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9561 17 264 3.40.50.720
4weoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9537 16 264 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2N4YNE3-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9988 123 265 GO:0016614
AF-A0A439JYE8-F1-model_v4 SDR family oxidoreductase 0.9983 111 265 GO:0016616
GO:0030497
AF-A0A380PTK5-F1-model_v4 Oxidoreductase YgfF (EC 1.1.1.47) 0.9975 72 265 GO:0047936
AF-A0A0E3A0Y7-F1-model_v4 deleted 0.9971 117 265
AF-A0A350CKN0-F1-model_v4 NAD(P)-dependent oxidoreductase 0.997 104 249 GO:0016614

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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