F367782

General Info

Members Datasets Scaffolds Average Seq Length
258 145 516 200

Family's Representative Sequence

Representative Sequence 3300003373|JGI25407J50210_10002393|JGI25407J50210_100023932
Length 215
Sequence VIGSLRGRLLDRGAADGVAGEVLVEVGGVGYRVVVAPTTAVALGDIGDEVFVWVHHHVREDTETLYGFGGRDERITFEALLGAHGVGPSLALAILSVHDPVALARILAEDDVGALCLVPGVGKKTAARLLVELKSRLHVPEFDPRIAASSRQASSANGAGTTHQPSTRSDVREALAGLGYSADEIHGATAELPDDGEASQLLRQALRHLATARQV

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
7 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
8 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
9 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
29 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
40 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
43 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
51 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
52 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
53 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
54 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
55 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
61 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
62 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
63 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
64 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
65 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
66 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
67 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
72 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
73 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
77 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
80 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
84 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
85 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
86 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
87 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
88 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
89 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
90 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
93 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
125 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
130 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.53
Nodule 0
Rhizoplane 2.71
Rhizosphere 87.6
Stem 0
Stem Tuber 0
Unclassified 2.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10002393 3300003373 Bacteria 4413
2 Ga0068868_101261373 3300005338 Bacteria 685
3 Ga0070675_100500538 3300005354 Bacteria 1095
4 Ga0070671_100001587 3300005355 Bacteria 17093
5 Ga0070673_100134653 3300005364 Unclassified 2078
6 Ga0070662_100515048 3300005457 Unclassified 999
7 Ga0070702_100152230 3300005615 Bacteria 1486
8 Ga0068858_101357773 3300005842 Bacteria 700
9 Ga0068860_100019929 3300005843 Bacteria 6504
10 Ga0068860_100394604 3300005843 Bacteria 1368
11 Ga0081455_10001061 3300005937 Bacteria 34632
12 Ga0081455_10006366 3300005937 Bacteria 12673
13 Ga0081455_10203764 3300005937 Bacteria 1479
14 Ga0081538_10000440 3300005981 Bacteria 46697
15 Ga0081538_10010199 3300005981 Bacteria 7720
16 Ga0075365_10018857 3300006038 Bacteria 4249
17 Ga0075365_10048868 3300006038 Bacteria 2786
18 Ga0075368_10082315 3300006042 Bacteria 1311
19 Ga0075368_10216018 3300006042 Bacteria 814
20 Ga0075363_100493834 3300006048 Bacteria 726
21 Ga0075364_10005007 3300006051 Bacteria 7683
22 Ga0075364_10047526 3300006051 Bacteria 2796
23 Ga0075364_10056268 3300006051 Bacteria 2575
24 Ga0075364_10237529 3300006051 Bacteria 1238
25 Ga0075362_10050978 3300006177 Bacteria 1852
26 Ga0075367_10046777 3300006178 Bacteria 2543
27 Ga0075369_10215758 3300006186 Bacteria 887
28 Ga0075428_100000660 3300006844 Bacteria 35436
29 Ga0075428_100027009 3300006844 Bacteria 6357
30 Ga0075428_100031738 3300006844 Bacteria 5835
31 Ga0075428_100146268 3300006844 Bacteria 2568
32 Ga0075428_100304821 3300006844 Bacteria 1712
33 Ga0075428_101202016 3300006844 Bacteria 799
34 Ga0075430_100000769 3300006846 Bacteria 24735
35 Ga0075430_100001548 3300006846 Bacteria 18796
36 Ga0075430_100118296 3300006846 Bacteria 2209
37 Ga0075430_100150419 3300006846 Bacteria 1938
38 Ga0075431_100029373 3300006847 Bacteria 5659
39 Ga0075431_100040949 3300006847 Bacteria 4776
40 Ga0075431_100043165 3300006847 Bacteria 4653
41 Ga0075431_100133088 3300006847 Bacteria 2564
42 Ga0075429_100001353 3300006880 Bacteria 20029
43 Ga0075429_100003343 3300006880 Bacteria 13669
44 Ga0075429_100327519 3300006880 Bacteria 1341
45 Ga0111539_10078208 3300009094 Bacteria 3892
46 Ga0111539_10270550 3300009094 Unclassified 1978
47 Ga0111539_10501928 3300009094 Bacteria 1413
48 Ga0111539_10798121 3300009094 Bacteria 1099
49 Ga0111539_10872949 3300009094 Bacteria 1046
50 Ga0105245_10002631 3300009098 Bacteria 16154
51 Ga0105245_10016509 3300009098 Bacteria 6443
52 Ga0105245_11274917 3300009098 Bacteria 783
53 Ga0114129_10003535 3300009147 Bacteria 21988
54 Ga0114129_10009363 3300009147 Bacteria 13967
55 Ga0114129_10026568 3300009147 Bacteria 8199
56 Ga0114129_10113888 3300009147 Bacteria 3729
57 Ga0114129_11429149 3300009147 Bacteria 852
58 Ga0105243_10086772 3300009148 Bacteria 2567
59 Ga0105239_10266915 3300010375 Bacteria 1924
60 Ga0157378_10276590 3300013297 Bacteria 1617
61 Ga0157379_10326392 3300014968 Bacteria 1402
62 Ga0163161_10151727 3300017792 Bacteria 1761
63 Ga0207652_10956094 3300025921 Bacteria 755
64 Ga0207659_10372371 3300025926 Bacteria 1189
65 Ga0207659_10511870 3300025926 Bacteria 1017
66 Ga0207687_10001924 3300025927 Bacteria 14295
67 Ga0207687_10016441 3300025927 Bacteria 4860
68 Ga0207687_10383983 3300025927 Bacteria 1151
69 Ga0207644_10003643 3300025931 Bacteria 9995
70 Ga0207708_10249574 3300026075 Bacteria 1430
71 Ga0207675_100621117 3300026118 Bacteria 1085
72 Ga0207428_10025966 3300027907 Bacteria 4894
73 Ga0207428_10132771 3300027907 Bacteria 1904
74 Ga0268264_10038811 3300028381 Bacteria 3932
75 Ga0307513_10465148 3300031456 Bacteria 987
76 Ga0307408_100681217 3300031548 Bacteria 922
77 Ga0316576_10000897 3300031727 Bacteria 15158
78 Ga0316576_10104455 3300031727 Bacteria 2120
79 Ga0316576_10299414 3300031727 Unclassified 1202
80 Ga0316576_10349308 3300031727 Unclassified 1101
81 Ga0316578_10035264 3300031728 Bacteria 2875
82 Ga0316577_10023034 3300031733 Bacteria 3459
83 Ga0307410_10019695 3300031852 Bacteria 4110
84 Ga0307410_10032025 3300031852 Bacteria 3379
85 Ga0307406_10351702 3300031901 Bacteria 1152
86 Ga0307409_100059918 3300031995 Bacteria 2965
87 Ga0307416_100113779 3300032002 Bacteria 2392
88 Ga0307414_10276463 3300032004 Bacteria 1409
89 Ga0307411_10087695 3300032005 Bacteria 2162
90 Ga0316580_10130260 3300032139 Bacteria 771
91 Ga0373948_0018226 3300034817 Bacteria 1316
92 Ga0373957_0090635 3300035120 Bacteria 1215
93 Ga0316574_0000647 3300035398 Bacteria 14617
94 Ga0316574_0162109 3300035398 Bacteria 1440
95 Ga0373931_0000019 3300035691 Bacteria 186534
96 Ga0373933_0070940 3300035724 Bacteria 2120
97 Ga0373937_0030461 3300036401 Bacteria 4887
98 Ga0316582_0082869 3300036647 Bacteria 2097
99 Ga0316584_0010710 3300036712 Bacteria 6420
100 Ga0316584_0132753 3300036712 Bacteria 1859
101 Ga0316584_0733012 3300036712 Bacteria 675
102 Ga0436365_1356040 3300039437 Bacteria 3754
103 Ga0451797_0566115 3300041453 Bacteria 923
104 Ga0451837_0050532 3300041494 Bacteria 2372
105 Ga0439450_003537 3300042008 Bacteria 2593
106 Ga0439463_004417 3300042016 Bacteria 3526
107 Ga0439464_0003310 3300042439 Bacteria 4053
108 Ga0439460_0002967 3300042461 Bacteria 4090
109 Ga0439440_0048317 3300042993 Bacteria 1057
110 Ga0495592_0131382 3300046454 Bacteria 1751
111 Ga0495603_0085476 3300046455 Bacteria 1847
112 Ga0495629_0218175 3300046459 Bacteria 1316
113 Ga0495651_0009077 3300046462 Bacteria 7632
114 Ga0495653_0015170 3300046463 Bacteria 6281
115 Ga0495653_0224682 3300046463 Bacteria 1260
116 Ga0495582_0524591 3300046473 Bacteria 685
117 Ga0495608_0053807 3300046511 Bacteria 2662
118 Ga0495628_0264373 3300046516 Bacteria 1281
119 Ga0495630_0288628 3300046517 Bacteria 1254
120 Ga0495630_0372849 3300046517 Bacteria 1093
121 Ga0495666_0199365 3300046526 Bacteria 920
122 Ga0495652_0388400 3300046529 Bacteria 991
123 Ga0495586_0059244 3300046535 Bacteria 2081
124 Ga0495587_0040782 3300046536 Bacteria 2772
125 Ga0495621_0025493 3300046539 Bacteria 1987
126 Ga0495667_0064175 3300046559 Bacteria 2402
127 Ga0495634_0042693 3300046642 Bacteria 3075
128 Ga0495657_0015428 3300046675 Bacteria 5591
129 Ga0495623_0039844 3300046679 Bacteria 3002
130 Ga0495647_0033509 3300046681 Bacteria 1920
131 Ga0495669_0174311 3300046684 Bacteria 1024
132 Ga0495613_0015109 3300046689 Bacteria 5734
133 Ga0495600_0052880 3300046809 Bacteria 2652
134 Ga0495604_0040956 3300047317 Bacteria 3635
135 Ga0495680_0154913 3300047322 Bacteria 1668
136 Ga0495680_0287815 3300047322 Bacteria 1156
137 Ga0495680_0297334 3300047322 Bacteria 1134
138 Ga0495684_0089455 3300047471 Bacteria 2333
139 Ga0495614_0046056 3300048089 Bacteria 1870
140 Ga0496103_0150075 3300048906 Bacteria 1493
141 Ga0496104_0032080 3300048907 Bacteria 4889
142 Ga0496105_0444086 3300048908 Bacteria 1025
143 Ga0496108_0321159 3300048911 Bacteria 1350
144 Ga0496109_0070250 3300048912 Bacteria 3213
145 Ga0496111_0183896 3300048914 Bacteria 1554
146 Ga0501031_0041974 3300049568 Bacteria 2987
147 Ga0501033_0002121 3300049570 Bacteria 17164
148 Ga0501034_0052991 3300049571 Bacteria 4087
149 Ga0501034_0118560 3300049571 Bacteria 2634
150 Ga0501036_0003957 3300049572 Bacteria 11908
151 Ga0501036_0034857 3300049572 Bacteria 4258
152 Ga0501036_0069240 3300049572 Bacteria 2985
153 Ga0501037_0198861 3300049573 Bacteria 1417
154 Ga0501038_0021255 3300049574 Bacteria 5827
155 Ga0501038_0896880 3300049574 Bacteria 655
156 Ga0501039_0018238 3300049575 Bacteria 5386
157 Ga0501040_0003991 3300049576 Bacteria 9587
158 Ga0501040_0020020 3300049576 Bacteria 4456
159 Ga0501041_0023726 3300049577 Bacteria 3678
160 Ga0501042_0008980 3300049578 Bacteria 6637
161 Ga0501042_0031449 3300049578 Bacteria 3754
162 Ga0501042_0196766 3300049578 Bacteria 1454
163 Ga0501043_0210248 3300049579 Bacteria 1508
164 Ga0501046_0009475 3300049580 Bacteria 8416
165 Ga0501046_0013251 3300049580 Bacteria 6986
166 Ga0501046_0753824 3300049580 Bacteria 684
167 Ga0501047_0260002 3300049581 Bacteria 1584
168 Ga0501048_0046098 3300049582 Bacteria 3113
169 Ga0501067_0063521 3300049583 Bacteria 2044
170 Ga0501068_0002688 3300049584 Bacteria 9422
171 Ga0501068_0085135 3300049584 Bacteria 1945
172 Ga0501069_0266659 3300049585 Bacteria 1000
173 Ga0501070_0002825 3300049586 Bacteria 15155
174 Ga0501070_0004588 3300049586 Bacteria 11840
175 Ga0501070_0354891 3300049586 Bacteria 1190
176 Ga0501071_0002680 3300049587 Bacteria 10898
177 Ga0501071_0010262 3300049587 Bacteria 6269
178 Ga0501071_0012504 3300049587 Bacteria 5759
179 Ga0501071_0017093 3300049587 Bacteria 4998
180 Ga0501071_0340209 3300049587 Bacteria 1141
181 Ga0501072_0002006 3300049588 Bacteria 15165
182 Ga0501072_0002573 3300049588 Bacteria 13592
183 Ga0501072_0004586 3300049588 Bacteria 10519
184 Ga0501072_0028988 3300049588 Bacteria 4321
185 Ga0501072_0030542 3300049588 Bacteria 4215
186 Ga0501072_0079976 3300049588 Bacteria 2589
187 Ga0501072_0141166 3300049588 Bacteria 1921
188 Ga0501072_0925339 3300049588 Bacteria 681
189 Ga0501073_0875519 3300049589 Bacteria 619
190 Ga0501074_0052325 3300049590 Bacteria 2948
191 Ga0501074_0060057 3300049590 Bacteria 2738
192 Ga0501074_0112957 3300049590 Bacteria 1944
193 Ga0501074_0228988 3300049590 Bacteria 1323
194 Ga0501075_0013649 3300049591 Bacteria 5802
195 Ga0501075_0017182 3300049591 Bacteria 5223
196 Ga0501076_0005729 3300049592 Bacteria 8957
197 Ga0501076_0138938 3300049592 Bacteria 1973
198 Ga0501076_0148320 3300049592 Bacteria 1907
199 Ga0501076_0288678 3300049592 Bacteria 1344
200 Ga0501076_0411686 3300049592 Bacteria 1112
201 Ga0501077_0001108 3300049593 Bacteria 16256
202 Ga0501079_0001870 3300049741 Bacteria 15098
203 Ga0501079_0005722 3300049741 Bacteria 9290
204 Ga0501079_0016903 3300049741 Bacteria 5572
205 Ga0501080_0018005 3300049742 Bacteria 6540
206 Ga0501080_0040737 3300049742 Bacteria 4331
207 Ga0501080_0276110 3300049742 Bacteria 1529
208 Ga0501080_0599162 3300049742 Bacteria 978
209 Ga0501080_0778751 3300049742 Bacteria 840
210 Ga0501081_0097646 3300049743 Bacteria 2073
211 Ga0501081_0249810 3300049743 Bacteria 1295
212 Ga0501081_0758330 3300049743 Bacteria 729
213 Ga0501083_0001831 3300049744 Bacteria 14585
214 Ga0501083_0126336 3300049744 Bacteria 1676
215 Ga0501045_0002857 3300049824 Bacteria 11802
216 Ga0501045_0004079 3300049824 Bacteria 10078
217 nmdc:mga03683_40910_c1 3300050489 Bacteria 1902
218 nmdc:mga03n38_447359_c1 3300050490 Bacteria 718
219 nmdc:mga00v17_1416_c1 3300050491 Bacteria 12590
220 nmdc:mga00v17_168040_c1 3300050491 Bacteria 1413
221 nmdc:mga0yw44_230905_c1 3300050492 Bacteria 1228
222 nmdc:mga0yw44_290919_c1 3300050492 Bacteria 1093
223 nmdc:mga0yw44_3949_c1 3300050492 Bacteria 6690
224 nmdc:mga06z11_445365_c1 3300050494 Bacteria 782
225 nmdc:mga05p37_114616_c1 3300050507 Bacteria 3313
226 nmdc:mga05p37_193_c1 3300050507 Bacteria 60583
227 nmdc:mga05p37_200292_c1 3300050507 Bacteria 2419
228 nmdc:mga09592_198407_c1 3300050508 Bacteria 1738
229 nmdc:mga09592_26349_c1 3300050508 Bacteria 4816
230 nmdc:mga09592_713_c1 3300050508 Bacteria 25509
231 nmdc:mga09592_864489_c1 3300050508 Bacteria 762
232 nmdc:mga0qj67_2923_c1 3300050509 Bacteria 12267
233 nmdc:mga0qj67_46810_c1 3300050509 Bacteria 3415
234 nmdc:mga0qj67_789_c1 3300050509 Bacteria 21551
235 nmdc:mga0qj67_848206_c1 3300050509 Bacteria 722
236 nmdc:mga06r32_102285_c1 3300050510 Bacteria 2813
237 nmdc:mga06r32_12517_c1 3300050510 Bacteria 7657
238 nmdc:mga06r32_165_c1 3300050510 Bacteria 51639
239 nmdc:mga06r32_2913_c1 3300050510 Bacteria 15350
240 nmdc:mga06r32_389242_c1 3300050510 Bacteria 1377
241 nmdc:mga06r32_812962_c1 3300050510 Unclassified 895
242 nmdc:mga08y16_106165_c1 3300050511 Bacteria 2923
243 nmdc:mga08y16_663910_c1 3300050511 Bacteria 1045
244 nmdc:mga08y16_88475_c1 3300050511 Bacteria 3228
245 Ga0500635_0020621 3300053080 Bacteria 2020
246 Ga0495595_0081514 3300053084 Bacteria 1542
247 Ga0495619_0613727 3300053085 Bacteria 743
248 Ga0500568_0000022 3300053139 Bacteria 184816
249 Ga0501084_0001335 3300054114 Bacteria 19473
250 Ga0501084_0028871 3300054114 Bacteria 4638
251 Ga0501082_0023537 3300060353 Bacteria 5314
252 Ga0501082_0028666 3300060353 Bacteria 4796
253 Ga0501082_0128831 3300060353 Bacteria 2195
254 Ga0501082_0332855 3300060353 Bacteria 1323
255 Ga0501082_0479538 3300060353 Bacteria 1087
256 Ga0530510_0004318 3300061734 Bacteria 9837
257 Ga0530510_0009436 3300061734 Bacteria 6843
258 Ga0530510_0016971 3300061734 Bacteria 5156
259 JGI25407J50210_10002393
260 Ga0068868_101261373
261 Ga0070675_100500538
262 Ga0070671_100001587
263 Ga0070673_100134653
264 Ga0070662_100515048
265 Ga0070702_100152230
266 Ga0068858_101357773
267 Ga0068860_100019929
268 Ga0068860_100394604
269 Ga0081455_10001061
270 Ga0081455_10006366
271 Ga0081455_10203764
272 Ga0081538_10000440
273 Ga0081538_10010199
274 Ga0075365_10018857
275 Ga0075365_10048868
276 Ga0075368_10082315
277 Ga0075368_10216018
278 Ga0075363_100493834
279 Ga0075364_10005007
280 Ga0075364_10047526
281 Ga0075364_10056268
282 Ga0075364_10237529
283 Ga0075362_10050978
284 Ga0075367_10046777
285 Ga0075369_10215758
286 Ga0075428_100000660
287 Ga0075428_100027009
288 Ga0075428_100031738
289 Ga0075428_100146268
290 Ga0075428_100304821
291 Ga0075428_101202016
292 Ga0075430_100000769
293 Ga0075430_100001548
294 Ga0075430_100118296
295 Ga0075430_100150419
296 Ga0075431_100029373
297 Ga0075431_100040949
298 Ga0075431_100043165
299 Ga0075431_100133088
300 Ga0075429_100001353
301 Ga0075429_100003343
302 Ga0075429_100327519
303 Ga0111539_10078208
304 Ga0111539_10270550
305 Ga0111539_10501928
306 Ga0111539_10798121
307 Ga0111539_10872949
308 Ga0105245_10002631
309 Ga0105245_10016509
310 Ga0105245_11274917
311 Ga0114129_10003535
312 Ga0114129_10009363
313 Ga0114129_10026568
314 Ga0114129_10113888
315 Ga0114129_11429149
316 Ga0105243_10086772
317 Ga0105239_10266915
318 Ga0157378_10276590
319 Ga0157379_10326392
320 Ga0163161_10151727
321 Ga0207652_10956094
322 Ga0207659_10372371
323 Ga0207659_10511870
324 Ga0207687_10001924
325 Ga0207687_10016441
326 Ga0207687_10383983
327 Ga0207644_10003643
328 Ga0207708_10249574
329 Ga0207675_100621117
330 Ga0207428_10025966
331 Ga0207428_10132771
332 Ga0268264_10038811
333 Ga0307513_10465148
334 Ga0307408_100681217
335 Ga0316576_10000897
336 Ga0316576_10104455
337 Ga0316576_10299414
338 Ga0316576_10349308
339 Ga0316578_10035264
340 Ga0316577_10023034
341 Ga0307410_10019695
342 Ga0307410_10032025
343 Ga0307406_10351702
344 Ga0307409_100059918
345 Ga0307416_100113779
346 Ga0307414_10276463
347 Ga0307411_10087695
348 Ga0316580_10130260
349 Ga0373948_0018226
350 Ga0373957_0090635
351 Ga0316574_0000647
352 Ga0316574_0162109
353 Ga0373931_0000019
354 Ga0373933_0070940
355 Ga0373937_0030461
356 Ga0316582_0082869
357 Ga0316584_0010710
358 Ga0316584_0132753
359 Ga0316584_0733012
360 Ga0436365_1356040
361 Ga0451797_0566115
362 Ga0451837_0050532
363 Ga0439450_003537
364 Ga0439463_004417
365 Ga0439464_0003310
366 Ga0439460_0002967
367 Ga0439440_0048317
368 Ga0495592_0131382
369 Ga0495603_0085476
370 Ga0495629_0218175
371 Ga0495651_0009077
372 Ga0495653_0015170
373 Ga0495653_0224682
374 Ga0495582_0524591
375 Ga0495608_0053807
376 Ga0495628_0264373
377 Ga0495630_0288628
378 Ga0495630_0372849
379 Ga0495666_0199365
380 Ga0495652_0388400
381 Ga0495586_0059244
382 Ga0495587_0040782
383 Ga0495621_0025493
384 Ga0495667_0064175
385 Ga0495634_0042693
386 Ga0495657_0015428
387 Ga0495623_0039844
388 Ga0495647_0033509
389 Ga0495669_0174311
390 Ga0495613_0015109
391 Ga0495600_0052880
392 Ga0495604_0040956
393 Ga0495680_0154913
394 Ga0495680_0287815
395 Ga0495680_0297334
396 Ga0495684_0089455
397 Ga0495614_0046056
398 Ga0496103_0150075
399 Ga0496104_0032080
400 Ga0496105_0444086
401 Ga0496108_0321159
402 Ga0496109_0070250
403 Ga0496111_0183896
404 Ga0501031_0041974
405 Ga0501033_0002121
406 Ga0501034_0052991
407 Ga0501034_0118560
408 Ga0501036_0003957
409 Ga0501036_0034857
410 Ga0501036_0069240
411 Ga0501037_0198861
412 Ga0501038_0021255
413 Ga0501038_0896880
414 Ga0501039_0018238
415 Ga0501040_0003991
416 Ga0501040_0020020
417 Ga0501041_0023726
418 Ga0501042_0008980
419 Ga0501042_0031449
420 Ga0501042_0196766
421 Ga0501043_0210248
422 Ga0501046_0009475
423 Ga0501046_0013251
424 Ga0501046_0753824
425 Ga0501047_0260002
426 Ga0501048_0046098
427 Ga0501067_0063521
428 Ga0501068_0002688
429 Ga0501068_0085135
430 Ga0501069_0266659
431 Ga0501070_0002825
432 Ga0501070_0004588
433 Ga0501070_0354891
434 Ga0501071_0002680
435 Ga0501071_0010262
436 Ga0501071_0012504
437 Ga0501071_0017093
438 Ga0501071_0340209
439 Ga0501072_0002006
440 Ga0501072_0002573
441 Ga0501072_0004586
442 Ga0501072_0028988
443 Ga0501072_0030542
444 Ga0501072_0079976
445 Ga0501072_0141166
446 Ga0501072_0925339
447 Ga0501073_0875519
448 Ga0501074_0052325
449 Ga0501074_0060057
450 Ga0501074_0112957
451 Ga0501074_0228988
452 Ga0501075_0013649
453 Ga0501075_0017182
454 Ga0501076_0005729
455 Ga0501076_0138938
456 Ga0501076_0148320
457 Ga0501076_0288678
458 Ga0501076_0411686
459 Ga0501077_0001108
460 Ga0501079_0001870
461 Ga0501079_0005722
462 Ga0501079_0016903
463 Ga0501080_0018005
464 Ga0501080_0040737
465 Ga0501080_0276110
466 Ga0501080_0599162
467 Ga0501080_0778751
468 Ga0501081_0097646
469 Ga0501081_0249810
470 Ga0501081_0758330
471 Ga0501083_0001831
472 Ga0501083_0126336
473 Ga0501045_0002857
474 Ga0501045_0004079
475 nmdc:mga03683_40910_c1
476 nmdc:mga03n38_447359_c1
477 nmdc:mga00v17_1416_c1
478 nmdc:mga00v17_168040_c1
479 nmdc:mga0yw44_230905_c1
480 nmdc:mga0yw44_290919_c1
481 nmdc:mga0yw44_3949_c1
482 nmdc:mga06z11_445365_c1
483 nmdc:mga05p37_114616_c1
484 nmdc:mga05p37_193_c1
485 nmdc:mga05p37_200292_c1
486 nmdc:mga09592_198407_c1
487 nmdc:mga09592_26349_c1
488 nmdc:mga09592_713_c1
489 nmdc:mga09592_864489_c1
490 nmdc:mga0qj67_2923_c1
491 nmdc:mga0qj67_46810_c1
492 nmdc:mga0qj67_789_c1
493 nmdc:mga0qj67_848206_c1
494 nmdc:mga06r32_102285_c1
495 nmdc:mga06r32_12517_c1
496 nmdc:mga06r32_165_c1
497 nmdc:mga06r32_2913_c1
498 nmdc:mga06r32_389242_c1
499 nmdc:mga06r32_812962_c1
500 nmdc:mga08y16_106165_c1
501 nmdc:mga08y16_663910_c1
502 nmdc:mga08y16_88475_c1
503 Ga0500635_0020621
504 Ga0495595_0081514
505 Ga0495619_0613727
506 Ga0500568_0000022
507 Ga0501084_0001335
508 Ga0501084_0028871
509 Ga0501082_0023537
510 Ga0501082_0028666
511 Ga0501082_0128831
512 Ga0501082_0332855
513 Ga0501082_0479538
514 Ga0530510_0004318
515 Ga0530510_0009436
516 Ga0530510_0016971

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01330

RuvA_N

RuvA N terminal domain

2

67

0.96

PF07499

RuvA_C

RuvA, C-terminal domain

166

210

0.94

PF14520

HHH_5

Helix-hairpin-helix domain

77

135

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zte-assembly1.cif.gz_A mtruva form iv 0.9629 1 137
7pbu-assembly1.cif.gz_F ruvab branch migration motor complexed to the holliday junction - ruva-hj core [t2 dataset] 0.9504 1 136
2zte-assembly1.cif.gz_A mtruva form iv 0.9419 1 137
7x7q-assembly1.cif.gz_G cryoem structure of ruva-ruvb-holliday junction complex 0.9393 1 137
7pbu-assembly1.cif.gz_F ruvab branch migration motor complexed to the holliday junction - ruva-hj core [t2 dataset] 0.9299 1 136
ID Description Score Start End Superfamily
1d8lB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9706 1 70 2.40.50.140
1bvsA02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9698 73 135 1.10.150.20
2ztdA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9621 1 70 2.40.50.140
1d8lB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9562 1 70 2.40.50.140
1d8lB01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9544 73 136 1.10.150.20
ID Description Score Start End GO Terms
AF-V7KDP7-F1-model_v4 deleted 0.9719 1 135
AF-A0A358D173-F1-model_v4 Holliday junction branch migration protein RuvA 0.9704 1 96 GO:0003677
GO:0005524
GO:0006281
GO:0006310
GO:0009378
AF-A0A350W1T9-F1-model_v4 Holliday junction branch migration protein RuvA 0.9612 1 88 GO:0003677
GO:0005524
GO:0006281
GO:0006310
GO:0009378
AF-A0A7W1FAJ8-F1-model_v4 Holliday junction branch migration protein RuvA (EC 3.6.4.12) 0.9595 1 131 GO:0003677
GO:0005524
GO:0005737
GO:0006281
GO:0006310
GO:0009378
GO:0016787
GO:0036121
GO:0061749
GO:1990518
AF-A0A2V9B6I0-F1-model_v4 Holliday junction branch migration protein RuvA 0.957 1 92 GO:0003677
GO:0005524
GO:0006281
GO:0006310
GO:0009378

Map