F367498

General Info

Members Datasets Scaffolds Average Seq Length
257 148 257 198

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0993441|Ga0451577_0993441_94_717
Length 207
Sequence VRIDYPPAIQRLVAQLKSLPGLGPRSAERLMLWLLQMREDRISALSNTLLEAKERIVPCSDCGFFIENDSACLLCHDPRRNQRLLCVVEQAADVLRLERSGAFQGLYHVLGGRLSPLDNVTPEDLRLESLVQRVRDLQTEEVIIALGSDVEGEATASYIADLLRPAGIAVTRLAQGMPAGGGLDHVDELTLYQALHGRRKMGWEAKS

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
79 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
88 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
89 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
90 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
91 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
92 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
93 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
96 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
97 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
98 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
114 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
125 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.39
Rhizosphere 99.22
Stem 0
Stem Tuber 0
Unclassified 0.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10016048 3300003320 Bacteria 16443
2 Ga0065712_10170259 3300005290 Unclassified 1248
3 Ga0070683_100115062 3300005329 Bacteria 2539
4 Ga0070690_100178466 3300005330 Unclassified 1466
5 Ga0070666_10016912 3300005335 Bacteria 4670
6 Ga0070680_100849315 3300005336 Unclassified 787
7 Ga0068868_100494417 3300005338 Bacteria 1070
8 Ga0070689_100016520 3300005340 Bacteria 5401
9 Ga0070689_100050091 3300005340 Bacteria 3226
10 Ga0070689_100126579 3300005340 Bacteria 2045
11 Ga0070688_100044201 3300005365 Bacteria 2748
12 Ga0070688_100139899 3300005365 Unclassified 1643
13 Ga0070681_10021583 3300005458 Bacteria 6455
14 Ga0070681_10479519 3300005458 Bacteria 1157
15 Ga0068867_100624923 3300005459 Bacteria 942
16 Ga0070685_10088932 3300005466 Unclassified 1866
17 Ga0070685_10176426 3300005466 Unclassified 1372
18 Ga0070698_100248125 3300005471 Bacteria 1713
19 Ga0070679_100157987 3300005530 Bacteria 2242
20 Ga0068853_100718709 3300005539 Unclassified 953
21 Ga0070686_100065065 3300005544 Bacteria 2367
22 Ga0070693_100147638 3300005547 Unclassified 1486
23 Ga0068855_100050763 3300005563 Bacteria 4887
24 Ga0068855_100236499 3300005563 Bacteria 2043
25 Ga0068857_100007957 3300005577 Bacteria 9151
26 Ga0068856_100000317 3300005614 Bacteria 52949
27 Ga0068856_100199578 3300005614 Bacteria 2015
28 Ga0068856_100344853 3300005614 Bacteria 1508
29 Ga0068852_100348084 3300005616 Bacteria 1446
30 Ga0068859_100012223 3300005617 Bacteria 8633
31 Ga0068859_100312282 3300005617 Unclassified 1666
32 Ga0068859_101295107 3300005617 Bacteria 803
33 Ga0068864_100753094 3300005618 Unclassified 955
34 Ga0068866_10388030 3300005718 Unclassified 897
35 Ga0068863_100235967 3300005841 Bacteria 1765
36 Ga0068863_101240445 3300005841 Unclassified 752
37 Ga0068858_100036071 3300005842 Bacteria 4585
38 Ga0068858_100060095 3300005842 Bacteria 3513
39 Ga0070715_10163445 3300006163 Bacteria 1102
40 Ga0097621_100292370 3300006237 Bacteria 1437
41 Ga0097621_100410888 3300006237 Unclassified 1213
42 Ga0068871_100086962 3300006358 Unclassified 2598
43 Ga0075428_100500896 3300006844 Unclassified 1299
44 Ga0075429_100018740 3300006880 Bacteria 5993
45 Ga0097620_100012223 3300006931 Bacteria 8633
46 Ga0097620_100312281 3300006931 Unclassified 1666
47 Ga0097620_101295220 3300006931 Bacteria 803
48 Ga0099794_10115407 3300007265 Bacteria 1348
49 Ga0105240_10002096 3300009093 Bacteria 32628
50 Ga0105240_10055992 3300009093 Unclassified 4936
51 Ga0105240_10215382 3300009093 Unclassified 2241
52 Ga0105240_10227447 3300009093 Bacteria 2170
53 Ga0105240_10258368 3300009093 Bacteria 2011
54 Ga0105240_10432747 3300009093 Unclassified 1476
55 Ga0111539_10033584 3300009094 Bacteria 6229
56 Ga0111539_10074627 3300009094 Bacteria 3996
57 Ga0111539_10130916 3300009094 Unclassified 2938
58 Ga0105245_10861366 3300009098 Unclassified 946
59 Ga0105242_10496121 3300009176 Bacteria 1160
60 Ga0105248_10148073 3300009177 Bacteria 2649
61 Ga0105248_10427097 3300009177 Bacteria 1492
62 Ga0105238_10006987 3300009551 Bacteria 11283
63 Ga0105238_10013081 3300009551 Bacteria 8371
64 Ga0105249_10324501 3300009553 Unclassified 1551
65 Ga0157374_10023522 3300013296 Bacteria 5512
66 Ga0157374_10646360 3300013296 Unclassified 1069
67 Ga0157372_11247468 3300013307 Bacteria 858
68 Ga0157375_10000094 3300013308 Bacteria 88991
69 Ga0157375_10094399 3300013308 Bacteria 3060
70 Ga0163163_10251424 3300014325 Unclassified 1818
71 Ga0157380_10637338 3300014326 Unclassified 1061
72 Ga0157376_10103918 3300014969 Bacteria 2488
73 Ga0207685_10288895 3300025905 Bacteria 807
74 Ga0207695_10051558 3300025913 Bacteria 4319
75 Ga0207695_10167542 3300025913 Unclassified 2124
76 Ga0207695_10168719 3300025913 Unclassified 2115
77 Ga0207695_10545889 3300025913 Bacteria 1040
78 Ga0207660_10683695 3300025917 Unclassified 837
79 Ga0207694_10001798 3300025924 Bacteria 17857
80 Ga0207687_10547948 3300025927 Unclassified 970
81 Ga0207664_10004007 3300025929 Bacteria 9929
82 Ga0207670_10003201 3300025936 Bacteria 8671
83 Ga0207670_10217833 3300025936 Unclassified 1459
84 Ga0207670_10843468 3300025936 Bacteria 765
85 Ga0207711_10505594 3300025941 Bacteria 1126
86 Ga0207711_10580235 3300025941 Bacteria 1046
87 Ga0207661_10076462 3300025944 Bacteria 2750
88 Ga0207667_10018639 3300025949 Bacteria 7779
89 Ga0207667_10052117 3300025949 Bacteria 4312
90 Ga0207667_10147286 3300025949 Bacteria 2423
91 Ga0207712_10436798 3300025961 Unclassified 1107
92 Ga0207677_10651593 3300026023 Bacteria 930
93 Ga0207703_10017209 3300026035 Bacteria 5641
94 Ga0207639_10111602 3300026041 Unclassified 2229
95 Ga0207708_10057630 3300026075 Bacteria 2964
96 Ga0207708_10216913 3300026075 Bacteria 1531
97 Ga0207708_10416890 3300026075 Unclassified 1113
98 Ga0207702_10001031 3300026078 Bacteria 28566
99 Ga0207702_10035423 3300026078 Bacteria 4173
100 Ga0207702_10039151 3300026078 Bacteria 3971
101 Ga0207702_10286196 3300026078 Unclassified 1560
102 Ga0207702_10743310 3300026078 Unclassified 968
103 Ga0207641_10086519 3300026088 Unclassified 2733
104 Ga0207641_10900624 3300026088 Bacteria 878
105 Ga0207676_10399745 3300026095 Unclassified 1284
106 Ga0207674_10013135 3300026116 Bacteria 9217
107 Ga0207675_100770683 3300026118 Bacteria 974
108 Ga0209588_1041470 3300027671 Bacteria 1486
109 Ga0265337_1014711 3300028556 Unclassified 2587
110 Ga0265337_1016722 3300028556 Bacteria 2366
111 Ga0265337_1110423 3300028556 Unclassified 747
112 Ga0265326_10008854 3300028558 Bacteria 3018
113 Ga0265326_10054512 3300028558 Bacteria 1131
114 Ga0265319_1035705 3300028563 Unclassified 1704
115 Ga0265323_10000166 3300028653 Bacteria 39420
116 Ga0265336_10033957 3300028666 Bacteria 1579
117 Ga0265338_10000062 3300028800 Bacteria 196060
118 Ga0265338_10000808 3300028800 Bacteria 52850
119 Ga0265338_10002033 3300028800 Bacteria 31299
120 Ga0265338_10003998 3300028800 Bacteria 20271
121 Ga0265338_10005637 3300028800 Bacteria 16256
122 Ga0265338_10010441 3300028800 Bacteria 10885
123 Ga0265338_10044278 3300028800 Bacteria 4112
124 Ga0265338_10044899 3300028800 Bacteria 4071
125 Ga0265338_10099177 3300028800 Unclassified 2380
126 Ga0265338_10119800 3300028800 Unclassified 2100
127 Ga0265338_10151988 3300028800 Unclassified 1798
128 Ga0265338_10238307 3300028800 Archaea 1349
129 Ga0265338_10275829 3300028800 Unclassified 1230
130 Ga0265338_10460841 3300028800 Bacteria 899
131 Ga0265338_10602382 3300028800 Unclassified 765
132 Ga0265324_10000682 3300029957 Bacteria 22784
133 Ga0265324_10002227 3300029957 Bacteria 10117
134 Ga0265324_10091191 3300029957 Unclassified 1036
135 Ga0265332_10067470 3300031238 Bacteria 1525
136 Ga0265320_10000580 3300031240 Bacteria 28151
137 Ga0265320_10066398 3300031240 Unclassified 1710
138 Ga0265320_10090561 3300031240 Bacteria 1417
139 Ga0265325_10087004 3300031241 Bacteria 1545
140 Ga0265329_10053801 3300031242 Bacteria 1279
141 Ga0265329_10212598 3300031242 Bacteria 639
142 Ga0265340_10036504 3300031247 Bacteria 2435
143 Ga0265340_10060249 3300031247 Unclassified 1819
144 Ga0265340_10071089 3300031247 Bacteria 1650
145 Ga0265339_10009307 3300031249 Bacteria 6187
146 Ga0265339_10033346 3300031249 Unclassified 2900
147 Ga0265327_10000699 3300031251 Bacteria 53339
148 Ga0265327_10004945 3300031251 Bacteria 11464
149 Ga0265327_10008199 3300031251 Bacteria 7836
150 Ga0265327_10032070 3300031251 Bacteria 2945
151 Ga0265316_10112082 3300031344 Unclassified 2065
152 Ga0265316_10231220 3300031344 Unclassified 1361
153 Ga0265313_10126327 3300031595 Bacteria 1111
154 Ga0265314_10011384 3300031711 Bacteria 7349
155 Ga0265314_10141143 3300031711 Unclassified 1489
156 Ga0265314_10147696 3300031711 Unclassified 1446
157 Ga0265342_10043839 3300031712 Bacteria 2698
158 Ga0307414_10076134 3300032004 Bacteria 2438
159 Ga0373930_0000495 3300034816 Bacteria 5360
160 Ga0373950_0008368 3300034818 Bacteria 1627
161 Ga0373959_0036780 3300034820 Unclassified 1012
162 Ga0373926_0213849 3300035083 Bacteria 743
163 Ga0373928_0000141 3300035084 Bacteria 13737
164 Ga0373929_0003953 3300035085 Bacteria 2656
165 Ga0373934_0140975 3300035086 Unclassified 986
166 Ga0373932_0000002 3300035112 Bacteria 711821
167 Ga0373945_0032910 3300035116 Bacteria 1839
168 Ga0373953_0070582 3300035117 Bacteria 1441
169 Ga0373956_0144776 3300035119 Unclassified 1117
170 Ga0373946_0477587 3300035171 Unclassified 637
171 Ga0373955_0102406 3300035172 Unclassified 1646
172 Ga0373962_0000092 3300035242 Bacteria 19617
173 Ga0373931_0000012 3300035691 Bacteria 267735
174 Ga0373935_0002723 3300035692 Bacteria 10174
175 Ga0373935_0019451 3300035692 Bacteria 4141
176 Ga0373927_0006663 3300035695 Bacteria 7859
177 Ga0373927_0007748 3300035695 Bacteria 7263
178 Ga0373933_0490550 3300035724 Unclassified 805
179 Ga0373947_0004266 3300035725 Bacteria 8391
180 Ga0373947_0018168 3300035725 Bacteria 4047
181 Ga0373947_0532229 3300035725 Bacteria 799
182 Ga0373937_0797536 3300036401 Unclassified 892
183 Ga0373925_0002096 3300037068 Bacteria 16369
184 Ga0373925_0003224 3300037068 Bacteria 12745
185 Ga0373925_0204010 3300037068 Bacteria 1573
186 Ga0373925_0904501 3300037068 Unclassified 727
187 Ga0373925_0964051 3300037068 Unclassified 703
188 Ga0395905_0896086 3300037471 Bacteria 790
189 Ga0451577_0004977 3300042876 Bacteria 13780
190 Ga0451577_0006289 3300042876 Bacteria 11889
191 Ga0451577_0298767 3300042876 Bacteria 1459
192 Ga0451577_0993441 3300042876 Bacteria 754
193 Ga0453684_0001627 3300044712 Bacteria 61330
194 Ga0453684_0005146 3300044712 Bacteria 26310
195 Ga0453684_0012301 3300044712 Bacteria 14161
196 Ga0451576_0071771 3300045051 Bacteria 3604
197 Ga0451576_0077693 3300045051 Bacteria 3455
198 Ga0451576_0130850 3300045051 Bacteria 2616
199 Ga0451576_0179993 3300045051 Bacteria 2207
200 Ga0451576_0252069 3300045051 Bacteria 1845
201 Ga0451576_0307647 3300045051 Bacteria 1658
202 Ga0451576_0574853 3300045051 Bacteria 1184
203 Ga0451576_0732446 3300045051 Bacteria 1039
204 Ga0451576_0735843 3300045051 Unclassified 1036
205 Ga0451576_0873168 3300045051 Unclassified 944
206 Ga0451576_1166369 3300045051 Unclassified 805
207 Ga0495592_0689683 3300046454 Unclassified 615
208 Ga0495641_0022946 3300046461 Bacteria 3112
209 Ga0495662_0129594 3300046476 Unclassified 1240
210 Ga0495664_0064417 3300046477 Bacteria 2185
211 Ga0495608_0388952 3300046511 Bacteria 854
212 Ga0495628_0075539 3300046516 Unclassified 2624
213 Ga0495628_0377290 3300046516 Bacteria 1039
214 Ga0495628_0917758 3300046516 Unclassified 607
215 Ga0495630_0173478 3300046517 Unclassified 1643
216 Ga0495630_0239552 3300046517 Unclassified 1386
217 Ga0495630_0416535 3300046517 Bacteria 1029
218 Ga0495586_0099588 3300046535 Bacteria 1612
219 Ga0495586_0136025 3300046535 Bacteria 1377
220 Ga0495587_0156450 3300046536 Bacteria 1298
221 Ga0495587_0277783 3300046536 Unclassified 939
222 Ga0495645_0425351 3300046543 Unclassified 842
223 Ga0495667_0190757 3300046559 Unclassified 1313
224 Ga0495667_0239048 3300046559 Unclassified 1157
225 Ga0495635_0519030 3300046663 Unclassified 783
226 Ga0495657_0048882 3300046675 Unclassified 2852
227 Ga0495599_0025011 3300046678 Bacteria 3736
228 Ga0495599_0206135 3300046678 Unclassified 1207
229 Ga0495599_0335624 3300046678 Bacteria 908
230 Ga0495669_0193172 3300046684 Unclassified 972
231 Ga0495613_0136995 3300046689 Bacteria 1751
232 Ga0495624_0182721 3300046690 Bacteria 1277
233 Ga0495604_0454574 3300047317 Unclassified 836
234 Ga0495674_0151369 3300047319 Unclassified 1945
235 Ga0495676_0561243 3300047321 Bacteria 745
236 Ga0495680_0472799 3300047322 Bacteria 855
237 Ga0495675_0361508 3300047444 Unclassified 852
238 Ga0495684_0272035 3300047471 Unclassified 1225
239 Ga0496115_0033554 3300048918 Bacteria 4053
240 Ga0501031_0000138 3300049568 Bacteria 40725
241 Ga0501032_0017525 3300049569 Bacteria 5028
242 Ga0501033_0011096 3300049570 Bacteria 6901
243 Ga0501033_0059584 3300049570 Bacteria 2819
244 Ga0501034_0581920 3300049571 Unclassified 1026
245 Ga0501034_0891654 3300049571 Bacteria 778
246 Ga0501037_0059384 3300049573 Bacteria 2790
247 Ga0501043_0137625 3300049579 Bacteria 1913
248 Ga0501047_0423967 3300049581 Bacteria 1162
249 Ga0501047_0505098 3300049581 Bacteria 1036
250 Ga0501080_0086367 3300049742 Bacteria 2915
251 Ga0501035_0016720 3300049822 Bacteria 6763
252 Ga0501035_0074087 3300049822 Bacteria 3012
253 Ga0501044_0000240 3300049823 Bacteria 69453
254 Ga0501044_1250046 3300049823 Bacteria 610
255 nmdc:mga09592_26157_c1 3300050508 Bacteria 4833
256 nmdc:mga08y16_66907_c1 3300050511 Bacteria 3749
257 nmdc:mga0a205_810829_c1 3300050515 Unclassified 784

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046454 Ga0495592_0689683 Ga0495592_0689683_56_565 168
2 3300037068 Ga0373925_0964051 Ga0373925_0964051_164_673 169
3 3300046516 Ga0495628_0917758 Ga0495628_0917758_79_591 170
4 3300045051 Ga0451576_0732446 Ga0451576_0732446_488_1006 171
5 3300050508 nmdc:mga09592_26157_c1 nmdc:mga09592_26157_c1_921_1439 172
6 3300026088 Ga0207641_10900624 Ga0207641_109006242 178
7 3300005547 Ga0070693_100147638 Ga0070693_1001476382 183
8 3300035083 Ga0373926_0213849 Ga0373926_0213849_113_673 186
9 3300035171 Ga0373946_0477587 Ga0373946_0477587_32_592 186
10 3300046516 Ga0495628_0377290 Ga0495628_0377290_304_864 186
11 3300046536 Ga0495587_0156450 Ga0495587_0156450_708_1268 186
12 3300047321 Ga0495676_0561243 Ga0495676_0561243_16_576 186
13 3300026078 Ga0207702_10743310 Ga0207702_107433102 187
14 3300049823 Ga0501044_1250046 Ga0501044_1250046_27_599 190
15 3300009094 Ga0111539_10033584 Ga0111539_100335844 191
16 3300005459 Ga0068867_100624923 Ga0068867_1006249232 193
17 3300025927 Ga0207687_10547948 Ga0207687_105479482 193
18 3300013296 Ga0157374_10023522 Ga0157374_100235223 197
19 3300026075 Ga0207708_10416890 Ga0207708_104168901 197
20 3300028800 Ga0265338_10044278 Ga0265338_100442783 197
21 3300031251 Ga0265327_10004945 Ga0265327_100049456 197
22 3300031711 Ga0265314_10141143 Ga0265314_101411432 197
23 3300032004 Ga0307414_10076134 Ga0307414_100761342 197
24 3300037471 Ga0395905_0896086 Ga0395905_0896086_33_638 197
25 3300045051 Ga0451576_0130850 Ga0451576_0130850_1422_2021 197
26 3300045051 Ga0451576_0873168 Ga0451576_0873168_160_759 197
27 3300049570 Ga0501033_0059584 Ga0501033_0059584_1743_2339 197
28 3300049822 Ga0501035_0074087 Ga0501035_0074087_2097_2693 197
29 3300005290 Ga0065712_10170259 Ga0065712_101702592 198
30 3300005330 Ga0070690_100178466 Ga0070690_1001784662 198
31 3300005335 Ga0070666_10016912 Ga0070666_100169125 198
32 3300005338 Ga0068868_100494417 Ga0068868_1004944171 198
33 3300005340 Ga0070689_100016520 Ga0070689_1000165205 198
34 3300005340 Ga0070689_100050091 Ga0070689_1000500912 198
35 3300005340 Ga0070689_100126579 Ga0070689_1001265793 198
36 3300005365 Ga0070688_100044201 Ga0070688_1000442012 198
37 3300005365 Ga0070688_100139899 Ga0070688_1001398992 198
38 3300005466 Ga0070685_10088932 Ga0070685_100889323 198
39 3300005466 Ga0070685_10176426 Ga0070685_101764262 198
40 3300005544 Ga0070686_100065065 Ga0070686_1000650653 198
41 3300005577 Ga0068857_100007957 Ga0068857_1000079573 198
42 3300005614 Ga0068856_100000317 Ga0068856_10000031710 198
43 3300005614 Ga0068856_100199578 Ga0068856_1001995783 198
44 3300005617 Ga0068859_100312282 Ga0068859_1003122822 198
45 3300005617 Ga0068859_101295107 Ga0068859_1012951071 198
46 3300005618 Ga0068864_100753094 Ga0068864_1007530942 198
47 3300005718 Ga0068866_10388030 Ga0068866_103880302 198
48 3300005841 Ga0068863_100235967 Ga0068863_1002359673 198
49 3300005841 Ga0068863_101240445 Ga0068863_1012404451 198
50 3300005842 Ga0068858_100036071 Ga0068858_1000360715 198
51 3300006163 Ga0070715_10163445 Ga0070715_101634452 198
52 3300006237 Ga0097621_100292370 Ga0097621_1002923703 198
53 3300006237 Ga0097621_100410888 Ga0097621_1004108881 198
54 3300006358 Ga0068871_100086962 Ga0068871_1000869623 198
55 3300006844 Ga0075428_100500896 Ga0075428_1005008962 198
56 3300006880 Ga0075429_100018740 Ga0075429_1000187402 198
57 3300006931 Ga0097620_100312281 Ga0097620_1003122813 198
58 3300006931 Ga0097620_101295220 Ga0097620_1012952202 198
59 3300007265 Ga0099794_10115407 Ga0099794_101154072 198
60 3300009093 Ga0105240_10215382 Ga0105240_102153822 198
61 3300009094 Ga0111539_10074627 Ga0111539_100746272 198
62 3300009094 Ga0111539_10130916 Ga0111539_101309163 198
63 3300009098 Ga0105245_10861366 Ga0105245_108613662 198
64 3300009176 Ga0105242_10496121 Ga0105242_104961212 198
65 3300009177 Ga0105248_10427097 Ga0105248_104270972 198
66 3300009551 Ga0105238_10013081 Ga0105238_100130817 198
67 3300009553 Ga0105249_10324501 Ga0105249_103245011 198
68 3300013308 Ga0157375_10000094 Ga0157375_1000009427 198
69 3300013308 Ga0157375_10094399 Ga0157375_100943991 198
70 3300014325 Ga0163163_10251424 Ga0163163_102514242 198
71 3300014326 Ga0157380_10637338 Ga0157380_106373382 198
72 3300014969 Ga0157376_10103918 Ga0157376_101039183 198
73 3300025905 Ga0207685_10288895 Ga0207685_102888951 198
74 3300025936 Ga0207670_10003201 Ga0207670_100032014 198
75 3300025936 Ga0207670_10217833 Ga0207670_102178332 198
76 3300025936 Ga0207670_10843468 Ga0207670_108434681 198
77 3300025941 Ga0207711_10505594 Ga0207711_105055942 198
78 3300025949 Ga0207667_10018639 Ga0207667_100186395 198
79 3300025961 Ga0207712_10436798 Ga0207712_104367981 198
80 3300026023 Ga0207677_10651593 Ga0207677_106515931 198
81 3300026075 Ga0207708_10057630 Ga0207708_100576303 198
82 3300026075 Ga0207708_10216913 Ga0207708_102169131 198
83 3300026078 Ga0207702_10001031 Ga0207702_1000103110 198
84 3300026078 Ga0207702_10286196 Ga0207702_102861961 198
85 3300026088 Ga0207641_10086519 Ga0207641_100865194 198
86 3300026095 Ga0207676_10399745 Ga0207676_103997453 198
87 3300026116 Ga0207674_10013135 Ga0207674_1001313510 198
88 3300026118 Ga0207675_100770683 Ga0207675_1007706831 198
89 3300027671 Ga0209588_1041470 Ga0209588_10414702 198
90 3300028556 Ga0265337_1014711 Ga0265337_10147113 198
91 3300028556 Ga0265337_1110423 Ga0265337_11104231 198
92 3300028558 Ga0265326_10008854 Ga0265326_100088541 198
93 3300028563 Ga0265319_1035705 Ga0265319_10357052 198
94 3300028653 Ga0265323_10000166 Ga0265323_100001663 198
95 3300028666 Ga0265336_10033957 Ga0265336_100339572 198
96 3300028800 Ga0265338_10000062 Ga0265338_10000062162 198
97 3300028800 Ga0265338_10000808 Ga0265338_1000080829 198
98 3300028800 Ga0265338_10002033 Ga0265338_1000203324 198
99 3300028800 Ga0265338_10003998 Ga0265338_100039984 198
100 3300028800 Ga0265338_10005637 Ga0265338_100056374 198
101 3300028800 Ga0265338_10010441 Ga0265338_100104418 198
102 3300028800 Ga0265338_10099177 Ga0265338_100991773 198
103 3300028800 Ga0265338_10119800 Ga0265338_101198001 198
104 3300028800 Ga0265338_10151988 Ga0265338_101519883 198
105 3300028800 Ga0265338_10238307 Ga0265338_102383072 198
106 3300028800 Ga0265338_10275829 Ga0265338_102758292 198
107 3300028800 Ga0265338_10602382 Ga0265338_106023822 198
108 3300029957 Ga0265324_10000682 Ga0265324_1000068212 198
109 3300029957 Ga0265324_10002227 Ga0265324_100022275 198
110 3300029957 Ga0265324_10091191 Ga0265324_100911912 198
111 3300031238 Ga0265332_10067470 Ga0265332_100674702 198
112 3300031240 Ga0265320_10000580 Ga0265320_100005804 198
113 3300031240 Ga0265320_10066398 Ga0265320_100663982 198
114 3300031240 Ga0265320_10090561 Ga0265320_100905613 198
115 3300031241 Ga0265325_10087004 Ga0265325_100870042 198
116 3300031242 Ga0265329_10053801 Ga0265329_100538013 198
117 3300031242 Ga0265329_10212598 Ga0265329_102125981 198
118 3300031247 Ga0265340_10036504 Ga0265340_100365043 198
119 3300031247 Ga0265340_10060249 Ga0265340_100602494 198
120 3300031247 Ga0265340_10071089 Ga0265340_100710891 198
121 3300031249 Ga0265339_10009307 Ga0265339_100093075 198
122 3300031249 Ga0265339_10033346 Ga0265339_100333462 198
123 3300031251 Ga0265327_10000699 Ga0265327_1000069928 198
124 3300031251 Ga0265327_10008199 Ga0265327_100081993 198
125 3300031251 Ga0265327_10032070 Ga0265327_100320702 198
126 3300031344 Ga0265316_10112082 Ga0265316_101120822 198
127 3300031344 Ga0265316_10231220 Ga0265316_102312201 198
128 3300031595 Ga0265313_10126327 Ga0265313_101263271 198
129 3300031711 Ga0265314_10011384 Ga0265314_100113845 198
130 3300031711 Ga0265314_10147696 Ga0265314_101476962 198
131 3300034816 Ga0373930_0000495 Ga0373930_0000495_3378_3974 198
132 3300034818 Ga0373950_0008368 Ga0373950_0008368_626_1222 198
133 3300034820 Ga0373959_0036780 Ga0373959_0036780_31_627 198
134 3300035084 Ga0373928_0000141 Ga0373928_0000141_1823_2419 198
135 3300035085 Ga0373929_0003953 Ga0373929_0003953_816_1412 198
136 3300035086 Ga0373934_0140975 Ga0373934_0140975_266_865 198
137 3300035112 Ga0373932_0000002 Ga0373932_0000002_15342_15938 198
138 3300035116 Ga0373945_0032910 Ga0373945_0032910_1004_1600 198
139 3300035117 Ga0373953_0070582 Ga0373953_0070582_818_1417 198
140 3300035119 Ga0373956_0144776 Ga0373956_0144776_137_736 198
141 3300035172 Ga0373955_0102406 Ga0373955_0102406_488_1087 198
142 3300035242 Ga0373962_0000092 Ga0373962_0000092_15357_15953 198
143 3300035691 Ga0373931_0000012 Ga0373931_0000012_15361_15957 198
144 3300035692 Ga0373935_0002723 Ga0373935_0002723_2093_2695 198
145 3300035692 Ga0373935_0019451 Ga0373935_0019451_1405_2001 198
146 3300035695 Ga0373927_0006663 Ga0373927_0006663_3632_4234 198
147 3300035724 Ga0373933_0490550 Ga0373933_0490550_46_648 198
148 3300035725 Ga0373947_0004266 Ga0373947_0004266_1348_1950 198
149 3300035725 Ga0373947_0018168 Ga0373947_0018168_870_1466 198
150 3300036401 Ga0373937_0797536 Ga0373937_0797536_154_756 198
151 3300037068 Ga0373925_0002096 Ga0373925_0002096_15364_15960 198
152 3300037068 Ga0373925_0003224 Ga0373925_0003224_3619_4221 198
153 3300037068 Ga0373925_0904501 Ga0373925_0904501_40_642 198
154 3300042876 Ga0451577_0006289 Ga0451577_0006289_2592_3200 198
155 3300042876 Ga0451577_0298767 Ga0451577_0298767_589_1191 198
156 3300044712 Ga0453684_0012301 Ga0453684_0012301_12877_13479 198
157 3300045051 Ga0451576_0071771 Ga0451576_0071771_1843_2445 198
158 3300045051 Ga0451576_0077693 Ga0451576_0077693_1897_2499 198
159 3300045051 Ga0451576_0179993 Ga0451576_0179993_1556_2155 198
160 3300045051 Ga0451576_0252069 Ga0451576_0252069_885_1484 198
161 3300045051 Ga0451576_0307647 Ga0451576_0307647_53_649 198
162 3300045051 Ga0451576_0574853 Ga0451576_0574853_127_729 198
163 3300045051 Ga0451576_0735843 Ga0451576_0735843_121_723 198
164 3300045051 Ga0451576_1166369 Ga0451576_1166369_132_734 198
165 3300046461 Ga0495641_0022946 Ga0495641_0022946_2335_2940 198
166 3300046476 Ga0495662_0129594 Ga0495662_0129594_295_894 198
167 3300046477 Ga0495664_0064417 Ga0495664_0064417_1553_2152 198
168 3300046511 Ga0495608_0388952 Ga0495608_0388952_29_631 198
169 3300046516 Ga0495628_0075539 Ga0495628_0075539_531_1130 198
170 3300046517 Ga0495630_0173478 Ga0495630_0173478_909_1508 198
171 3300046517 Ga0495630_0239552 Ga0495630_0239552_498_1097 198
172 3300046517 Ga0495630_0416535 Ga0495630_0416535_224_826 198
173 3300046535 Ga0495586_0099588 Ga0495586_0099588_270_872 198
174 3300046535 Ga0495586_0136025 Ga0495586_0136025_677_1282 198
175 3300046536 Ga0495587_0277783 Ga0495587_0277783_253_852 198
176 3300046543 Ga0495645_0425351 Ga0495645_0425351_172_774 198
177 3300046559 Ga0495667_0190757 Ga0495667_0190757_598_1200 198
178 3300046559 Ga0495667_0239048 Ga0495667_0239048_215_814 198
179 3300046663 Ga0495635_0519030 Ga0495635_0519030_113_709 198
180 3300046675 Ga0495657_0048882 Ga0495657_0048882_1624_2226 198
181 3300046678 Ga0495599_0025011 Ga0495599_0025011_2907_3509 198
182 3300046678 Ga0495599_0206135 Ga0495599_0206135_192_791 198
183 3300046678 Ga0495599_0335624 Ga0495599_0335624_74_670 198
184 3300046684 Ga0495669_0193172 Ga0495669_0193172_199_795 198
185 3300046689 Ga0495613_0136995 Ga0495613_0136995_695_1300 198
186 3300046690 Ga0495624_0182721 Ga0495624_0182721_61_657 198
187 3300047317 Ga0495604_0454574 Ga0495604_0454574_194_793 198
188 3300047319 Ga0495674_0151369 Ga0495674_0151369_286_885 198
189 3300047322 Ga0495680_0472799 Ga0495680_0472799_41_640 198
190 3300047444 Ga0495675_0361508 Ga0495675_0361508_148_747 198
191 3300047471 Ga0495684_0272035 Ga0495684_0272035_108_707 198
192 3300049568 Ga0501031_0000138 Ga0501031_0000138_37768_38367 198
193 3300049569 Ga0501032_0017525 Ga0501032_0017525_2065_2664 198
194 3300049570 Ga0501033_0011096 Ga0501033_0011096_159_758 198
195 3300049571 Ga0501034_0891654 Ga0501034_0891654_161_760 198
196 3300049573 Ga0501037_0059384 Ga0501037_0059384_207_806 198
197 3300049579 Ga0501043_0137625 Ga0501043_0137625_732_1331 198
198 3300049581 Ga0501047_0423967 Ga0501047_0423967_530_1129 198
199 3300049822 Ga0501035_0016720 Ga0501035_0016720_3771_4370 198
200 3300049823 Ga0501044_0000240 Ga0501044_0000240_44309_44908 198
201 3300050511 nmdc:mga08y16_66907_c1 nmdc:mga08y16_66907_c1_702_1304 198
202 3300050515 nmdc:mga0a205_810829_c1 nmdc:mga0a205_810829_c1_49_651 198
203 3300003320 rootH2_10016048 rootH2_1001604812 199
204 3300005329 Ga0070683_100115062 Ga0070683_1001150622 199
205 3300005336 Ga0070680_100849315 Ga0070680_1008493151 199
206 3300005458 Ga0070681_10021583 Ga0070681_100215835 199
207 3300005458 Ga0070681_10479519 Ga0070681_104795192 199
208 3300005471 Ga0070698_100248125 Ga0070698_1002481252 199
209 3300005530 Ga0070679_100157987 Ga0070679_1001579874 199
210 3300005539 Ga0068853_100718709 Ga0068853_1007187091 199
211 3300005563 Ga0068855_100050763 Ga0068855_1000507634 199
212 3300005563 Ga0068855_100236499 Ga0068855_1002364992 199
213 3300005614 Ga0068856_100344853 Ga0068856_1003448532 199
214 3300005616 Ga0068852_100348084 Ga0068852_1003480842 199
215 3300005617 Ga0068859_100012223 Ga0068859_1000122233 199
216 3300005842 Ga0068858_100060095 Ga0068858_1000600953 199
217 3300006931 Ga0097620_100012223 Ga0097620_1000122233 199
218 3300009093 Ga0105240_10002096 Ga0105240_1000209628 199
219 3300009093 Ga0105240_10055992 Ga0105240_100559924 199
220 3300009093 Ga0105240_10227447 Ga0105240_102274471 199
221 3300009093 Ga0105240_10258368 Ga0105240_102583681 199
222 3300009093 Ga0105240_10432747 Ga0105240_104327473 199
223 3300009177 Ga0105248_10148073 Ga0105248_101480732 199
224 3300009551 Ga0105238_10006987 Ga0105238_100069878 199
225 3300013296 Ga0157374_10646360 Ga0157374_106463602 199
226 3300013307 Ga0157372_11247468 Ga0157372_112474682 199
227 3300025913 Ga0207695_10051558 Ga0207695_100515585 199
228 3300025913 Ga0207695_10167542 Ga0207695_101675424 199
229 3300025913 Ga0207695_10168719 Ga0207695_101687191 199
230 3300025913 Ga0207695_10545889 Ga0207695_105458892 199
231 3300025917 Ga0207660_10683695 Ga0207660_106836952 199
232 3300025924 Ga0207694_10001798 Ga0207694_1000179810 199
233 3300025929 Ga0207664_10004007 Ga0207664_100040076 199
234 3300025941 Ga0207711_10580235 Ga0207711_105802351 199
235 3300025944 Ga0207661_10076462 Ga0207661_100764624 199
236 3300025949 Ga0207667_10052117 Ga0207667_100521174 199
237 3300025949 Ga0207667_10147286 Ga0207667_101472863 199
238 3300026035 Ga0207703_10017209 Ga0207703_100172095 199
239 3300026041 Ga0207639_10111602 Ga0207639_101116023 199
240 3300026078 Ga0207702_10035423 Ga0207702_100354235 199
241 3300026078 Ga0207702_10039151 Ga0207702_100391511 199
242 3300028556 Ga0265337_1016722 Ga0265337_10167223 199
243 3300028558 Ga0265326_10054512 Ga0265326_100545122 199
244 3300028800 Ga0265338_10044899 Ga0265338_100448992 199
245 3300028800 Ga0265338_10460841 Ga0265338_104608412 199
246 3300031712 Ga0265342_10043839 Ga0265342_100438392 199
247 3300035695 Ga0373927_0007748 Ga0373927_0007748_58_666 199
248 3300035725 Ga0373947_0532229 Ga0373947_0532229_78_683 199
249 3300037068 Ga0373925_0204010 Ga0373925_0204010_617_1225 199
250 3300042876 Ga0451577_0004977 Ga0451577_0004977_11024_11629 199
251 3300042876 Ga0451577_0993441 Ga0451577_0993441_94_717 199
252 3300044712 Ga0453684_0001627 Ga0453684_0001627_43772_44377 199
253 3300044712 Ga0453684_0005146 Ga0453684_0005146_14730_15335 199
254 3300048918 Ga0496115_0033554 Ga0496115_0033554_3402_4004 199
255 3300049571 Ga0501034_0581920 Ga0501034_0581920_167_769 199
256 3300049581 Ga0501047_0505098 Ga0501047_0505098_20_625 199
257 3300049742 Ga0501080_0086367 Ga0501080_0086367_540_1142 199

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21175

RecR_C

RecR, C-terminal

176

199

0.99

PF13662

Toprim_4

Toprim domain

83

174

0.97

PF21176

RecR_HhH

RecR, helix-hairpin-helix

9

53

0.97

PF01751

Toprim

Toprim domain

84

173

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a93-assembly1.cif.gz_F complex of recf-recr-dna from thermus thermophilus. 0.9233 79 170
8a93-assembly1.cif.gz_F complex of recf-recr-dna from thermus thermophilus. 0.9137 79 170
8a93-assembly1.cif.gz_D complex of recf-recr-dna from thermus thermophilus. 0.8734 3 45
3ve5-assembly1.cif.gz_A structure of recombination mediator protein recr16-196 deletion mutant 0.8583 17 197
3ve5-assembly1.cif.gz_A structure of recombination mediator protein recr16-196 deletion mutant 0.8538 17 197
ID Description Score Start End Superfamily
af_P9WHI3_76_174_3.40.1360.10 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.9757 76 169 3.40.1360.10
3ve5A03 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.969 76 197 3.40.1360.10
3ve5A03 Alpha Beta;3-Layer(aba) Sandwich;Dna Topoisomerase Vi A Subunit; Chain: A, domain 2; 0.9613 76 197 3.40.1360.10
3vdpB01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.9399 6 51 1.10.8.420
3vduA01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;RecR Domain 1 0.9341 6 51 1.10.8.420
ID Description Score Start End GO Terms
AF-A0A268RH89-F1-model_v4 Recombination protein RecR 0.9687 70 172 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-W1XYN8-F1-model_v4 Recombination protein RecR 0.9674 38 151 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-A0A7W8DH76-F1-model_v4 Recombination protein RecR 0.9619 1 192 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-A0A3D0TKE5-F1-model_v4 Recombination protein RecR 0.9616 50 172 GO:0003677
GO:0006281
GO:0006310
GO:0046872
AF-A0A6C1U0N1-F1-model_v4 Recombination protein RecR 0.96 14 154 GO:0003677
GO:0006281
GO:0006310
GO:0046872

Feature Viewer

pLDDT pTM Quality
89.19 0.81 High
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Predicted Structure (AlphaFold2)

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