F367163

General Info

Members Datasets Scaffolds Average Seq Length
257 183 256 168

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100623574|Ga0068852_1006235741
Length 193
Sequence MLNAPHAADNGDRRAPTGVDDKPADALAHAWAVLESVPDPEIPVVSIRELGILRGVEQAEDGALEVAITPTYSGCPAMSQIAEDIGQALDRAGLTPHRIKTVLAPAWTTDWITDEARAKLRAYGIAPPGGQCAAGAAAGEQAIRFMPRRVAAPACPRCGSAHTERLAQFGSTACKALYRCLDCREPFDYFKPY

Samples

Sample ID Description Type Environment
1 2885266251 Ralstonia sp. SET104 Isolate Nodule
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
4 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
66 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
67 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
94 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
106 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
107 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
108 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
109 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
118 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
119 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
120 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
121 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
122 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
123 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
129 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
163 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
164 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
165 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
166 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
167 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
174 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
179 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.44
Metatranscriptomes 1.17
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.45
Nodule 0.39
Rhizoplane 7.39
Rhizosphere 84.82
Stem 0
Stem Tuber 0
Unclassified 1.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10075262 3300003323 Bacteria 6617
2 Ga0055525_1000004 3300003759 Bacteria 888039
3 Ga0055537_1000381 3300003773 Bacteria 29870
4 Ga0065714_10002738 3300005288 Bacteria 11557
5 Ga0065715_10094976 3300005293 Bacteria 4197
6 Ga0065715_10220150 3300005293 Bacteria 1275
7 Ga0070658_10008075 3300005327 Bacteria 8466
8 Ga0070658_10855233 3300005327 Bacteria 791
9 Ga0070666_10308259 3300005335 Bacteria 1128
10 Ga0070660_100172869 3300005339 Bacteria 1745
11 Ga0070689_100146904 3300005340 Bacteria 1899
12 Ga0070668_100069283 3300005347 Bacteria 2744
13 Ga0070709_10000748 3300005434 Bacteria 18362
14 Ga0070709_10193633 3300005434 Unclassified 1436
15 Ga0070714_100001589 3300005435 Bacteria 16510
16 Ga0070714_100003573 3300005435 Bacteria 11628
17 Ga0070714_100691160 3300005435 Bacteria 984
18 Ga0070710_10002333 3300005437 Bacteria 8983
19 Ga0070711_100014874 3300005439 Bacteria 4915
20 Ga0070705_100271311 3300005440 Bacteria 1202
21 Ga0070705_100325342 3300005440 Unclassified 1112
22 Ga0070694_100060464 3300005444 Bacteria 2584
23 Ga0070708_100029594 3300005445 Bacteria 4724
24 Ga0070708_100813507 3300005445 Bacteria 878
25 Ga0070663_100478281 3300005455 Bacteria 1031
26 Ga0070662_100009125 3300005457 Bacteria 6476
27 Ga0070662_100555138 3300005457 Bacteria 963
28 Ga0070706_100002404 3300005467 Bacteria 18872
29 Ga0070706_100555922 3300005467 Bacteria 1067
30 Ga0070707_100005397 3300005468 Bacteria 11961
31 Ga0070698_101258606 3300005471 Bacteria 690
32 Ga0070699_100012573 3300005518 Bacteria 7301
33 Ga0070699_100840212 3300005518 Bacteria 841
34 Ga0070679_100213434 3300005530 Bacteria 1893
35 Ga0070679_100696322 3300005530 Unclassified 959
36 Ga0070684_100094069 3300005535 Bacteria 2669
37 Ga0070697_100047786 3300005536 Bacteria 3469
38 Ga0068853_100204652 3300005539 Unclassified 1797
39 Ga0070696_100010458 3300005546 Bacteria 6219
40 Ga0070696_100276997 3300005546 Bacteria 1277
41 Ga0070696_100282340 3300005546 Unclassified 1266
42 Ga0070696_100283076 3300005546 Bacteria 1264
43 Ga0070704_100200679 3300005549 Bacteria 1610
44 Ga0068855_100081819 3300005563 Bacteria 3742
45 Ga0068852_100499505 3300005616 Bacteria 1211
46 Ga0068852_100623574 3300005616 Bacteria 1084
47 Ga0068859_100012064 3300005617 Bacteria 8682
48 Ga0068864_100733007 3300005618 Bacteria 967
49 Ga0068864_101304971 3300005618 Bacteria 726
50 Ga0068866_10232678 3300005718 Bacteria 1118
51 Ga0068863_100092336 3300005841 Bacteria 2872
52 Ga0068858_100431387 3300005842 Bacteria 1268
53 Ga0070717_11177105 3300006028 Bacteria 698
54 Ga0075365_10065818 3300006038 Bacteria 2430
55 Ga0075363_100249832 3300006048 Bacteria 1021
56 Ga0070716_100164000 3300006173 Bacteria 1443
57 Ga0070712_100758497 3300006175 Bacteria 831
58 Ga0070712_101361669 3300006175 Bacteria 619
59 Ga0075370_10246259 3300006353 Bacteria 1059
60 Ga0075370_10645492 3300006353 Bacteria 642
61 Ga0075428_100006155 3300006844 Bacteria 13353
62 Ga0075428_100104380 3300006844 Bacteria 3091
63 Ga0075431_100001861 3300006847 Bacteria 19979
64 Ga0075431_100024684 3300006847 Bacteria 6164
65 Ga0075433_10119938 3300006852 Bacteria 2335
66 Ga0075434_100021100 3300006871 Bacteria 6330
67 Ga0075434_100028729 3300006871 Bacteria 5468
68 Ga0075429_100001959 3300006880 Bacteria 17088
69 Ga0075436_100128982 3300006914 Bacteria 1773
70 Ga0097620_100012064 3300006931 Bacteria 8682
71 Ga0075435_100186161 3300007076 Bacteria 1756
72 Ga0111539_10003310 3300009094 Bacteria 21272
73 Ga0114129_10000199 3300009147 Bacteria 66704
74 Ga0114129_10002529 3300009147 Bacteria 25398
75 Ga0114129_10263625 3300009147 Unclassified 2308
76 Ga0114129_12348164 3300009147 Bacteria 639
77 Ga0105243_10000150 3300009148 Bacteria 79825
78 Ga0105237_10138392 3300009545 Bacteria 2429
79 Ga0105249_10694812 3300009553 Bacteria 1077
80 Ga0105239_10008939 3300010375 Bacteria 11334
81 Ga0105246_10457165 3300011119 Bacteria 1074
82 Ga0157326_1000022 3300012513 Bacteria 13580
83 Ga0157373_10024950 3300013100 Bacteria 4328
84 Ga0157371_10076252 3300013102 Bacteria 2374
85 Ga0157371_10130422 3300013102 Bacteria 1788
86 Ga0157369_10000541 3300013105 Bacteria 49930
87 Ga0157369_10222172 3300013105 Bacteria 1977
88 Ga0157369_11067691 3300013105 Bacteria 826
89 Ga0157372_10001980 3300013307 Bacteria 22263
90 Ga0157372_10096434 3300013307 Bacteria 3370
91 Ga0157372_10133452 3300013307 Bacteria 2858
92 Ga0157372_10382168 3300013307 Bacteria 1641
93 Ga0163163_10957326 3300014325 Bacteria 919
94 Ga0163163_11665113 3300014325 Bacteria 699
95 Ga0182006_1021587 3300015261 Bacteria 2683
96 Ga0182007_10005283 3300015262 Bacteria 5698
97 Ga0206356_10421279 3300020070 Bacteria 1906
98 Ga0206354_10074385 3300020081 Bacteria 1078
99 Ga0206353_10370279 3300020082 Bacteria 2694
100 Ga0213872_10036436 3300021361 Bacteria 2248
101 Ga0209563_100013 3300025230 Bacteria 941463
102 Ga0207692_10000987 3300025898 Bacteria 10377
103 Ga0207699_10000435 3300025906 Bacteria 21275
104 Ga0207705_10107292 3300025909 Bacteria 2060
105 Ga0207684_10045981 3300025910 Bacteria 3703
106 Ga0207684_10367805 3300025910 Bacteria 1237
107 Ga0207671_10211772 3300025914 Bacteria 1516
108 Ga0207693_10091190 3300025915 Bacteria 2389
109 Ga0207693_10374992 3300025915 Bacteria 1113
110 Ga0207663_10002427 3300025916 Bacteria 8953
111 Ga0207660_10035525 3300025917 Bacteria 3461
112 Ga0207657_10071142 3300025919 Bacteria 2946
113 Ga0207652_10293561 3300025921 Bacteria 1467
114 Ga0207652_10480533 3300025921 Bacteria 1119
115 Ga0207646_10061126 3300025922 Bacteria 3363
116 Ga0207700_10492644 3300025928 Bacteria 1084
117 Ga0207664_10005062 3300025929 Bacteria 8977
118 Ga0207664_10045065 3300025929 Bacteria 3457
119 Ga0207706_10019828 3300025933 Bacteria 6044
120 Ga0207670_10483451 3300025936 Bacteria 1003
121 Ga0207665_10061174 3300025939 Bacteria 2552
122 Ga0207665_10176567 3300025939 Bacteria 1545
123 Ga0207665_10662678 3300025939 Bacteria 819
124 Ga0207667_10180327 3300025949 Unclassified 2169
125 Ga0207712_10087816 3300025961 Bacteria 2281
126 Ga0207668_10066045 3300025972 Bacteria 2563
127 Ga0207641_10858419 3300026088 Bacteria 900
128 Ga0207428_10003318 3300027907 Bacteria 15655
129 Ga0265328_10001740 3300031239 Bacteria 9963
130 Ga0265331_10018920 3300031250 Bacteria 3561
131 Ga0265327_10000120 3300031251 Bacteria 171108
132 Ga0265327_10007676 3300031251 Bacteria 8260
133 Ga0307408_100298043 3300031548 Bacteria 1349
134 Ga0307516_10108579 3300031730 Bacteria 2582
135 Ga0307405_10721741 3300031731 Archaea 827
136 Ga0307410_10449819 3300031852 Bacteria 1050
137 Ga0307406_10198567 3300031901 Bacteria 1474
138 Ga0307407_10084278 3300031903 Bacteria 1930
139 Ga0307407_10766461 3300031903 Bacteria 732
140 Ga0307412_10299563 3300031911 Bacteria 1270
141 Ga0307416_101312355 3300032002 Bacteria 829
142 Ga0307415_100494720 3300032126 Bacteria 1067
143 Ga0316583_10000299 3300032133 Bacteria 13887
144 Ga0316583_10039192 3300032133 Bacteria 1678
145 Ga0373948_0089801 3300034817 Unclassified 712
146 Ga0373928_0078494 3300035084 Bacteria 829
147 Ga0373929_0015801 3300035085 Unclassified 1472
148 Ga0373949_0007609 3300035090 Bacteria 2373
149 Ga0373931_0007125 3300035691 Bacteria 5259
150 Ga0395899_0031508 3300037312 Bacteria 3985
151 Ga0395900_0008593 3300037418 Bacteria 10493
152 Ga0395900_0086981 3300037418 Bacteria 3212
153 Ga0395898_0004331 3300037466 Bacteria 15539
154 Ga0395898_0054278 3300037466 Bacteria 3911
155 Ga0395905_0217837 3300037471 Bacteria 1787
156 Ga0436364_0265631 3300037853 Bacteria 2994
157 Ga0436364_0522439 3300037853 Bacteria 1395
158 Ga0395901_0000319 3300038443 Bacteria 59493
159 Ga0395901_0588975 3300038443 Bacteria 1123
160 Ga0395901_0599786 3300038443 Bacteria 1110
161 Ga0242420_004322 3300038996 Bacteria 2142
162 Ga0242420_009933 3300038996 Unclassified 1572
163 Ga0436360_0856114 3300039438 Bacteria 1831
164 Ga0436361_0490018 3300039447 Bacteria 1122
165 Ga0451853_1704552 3300041512 Bacteria 644
166 Ga0439458_0159193 3300042157 Bacteria 607
167 Ga0439464_0024878 3300042439 Bacteria 1657
168 Ga0466972_0050984 3300044658 Bacteria 1997
169 Ga0453683_0266661 3300044673 Bacteria 1093
170 Ga0466965_0039119 3300044683 Bacteria 2330
171 Ga0466965_0084749 3300044683 Bacteria 1606
172 Ga0466966_0001782 3300044684 Bacteria 13969
173 Ga0466966_0029762 3300044684 Bacteria 3550
174 Ga0466961_0001940 3300044693 Bacteria 12885
175 Ga0466961_0271446 3300044693 Bacteria 1039
176 Ga0466963_0122690 3300044694 Bacteria 1789
177 Ga0466963_0561091 3300044694 Bacteria 806
178 Ga0466963_0640207 3300044694 Bacteria 750
179 Ga0466964_0040912 3300044706 Bacteria 1873
180 Ga0466971_0021928 3300044719 Bacteria 2843
181 Ga0466971_0257953 3300044719 Bacteria 831
182 Ga0466968_0019083 3300044735 Bacteria 2757
183 Ga0466970_0011367 3300044765 Bacteria 4537
184 Ga0466957_0014281 3300044842 Bacteria 4623
185 Ga0466957_0041148 3300044842 Bacteria 2794
186 Ga0466959_0010368 3300045049 Bacteria 6657
187 Ga0466958_0003522 3300045836 Bacteria 8139
188 Ga0466958_0052722 3300045836 Bacteria 2466
189 Ga0466958_0086696 3300045836 Bacteria 1932
190 Ga0466967_0130212 3300045976 Bacteria 2335
191 Ga0495651_0122264 3300046462 Bacteria 1911
192 Ga0495663_0079362 3300046525 Bacteria 1055
193 Ga0495622_0098122 3300046557 Bacteria 1344
194 Ga0495667_0790324 3300046559 Bacteria 585
195 Ga0495668_0000313 3300046616 Bacteria 66918
196 Ga0495668_0197055 3300046616 Bacteria 1103
197 Ga0495634_0581674 3300046642 Bacteria 651
198 Ga0495599_0135025 3300046678 Bacteria 1532
199 Ga0495613_0029862 3300046689 Bacteria 4051
200 Ga0495600_0043967 3300046809 Bacteria 2914
201 Ga0495600_0283748 3300046809 Bacteria 1048
202 Ga0495581_0396747 3300047315 Unclassified 805
203 Ga0495686_0000442 3300047472 Bacteria 62801
204 Ga0496102_0002168 3300048905 Bacteria 16849
205 Ga0496102_0340395 3300048905 Unclassified 1413
206 Ga0496104_0018711 3300048907 Bacteria 6322
207 Ga0496105_0106207 3300048908 Bacteria 2318
208 Ga0496107_0146401 3300048910 Bacteria 1747
209 Ga0496107_0330295 3300048910 Bacteria 1135
210 Ga0496108_0484451 3300048911 Bacteria 1080
211 Ga0496109_0005313 3300048912 Bacteria 10765
212 Ga0496109_0095827 3300048912 Unclassified 2748
213 Ga0496110_0029093 3300048913 Bacteria 4750
214 Ga0496110_0092541 3300048913 Bacteria 2706
215 Ga0496110_0124333 3300048913 Bacteria 2327
216 Ga0496111_0004841 3300048914 Bacteria 8541
217 Ga0496112_0095731 3300048915 Bacteria 2939
218 Ga0496112_0137983 3300048915 Bacteria 2408
219 Ga0496112_0440862 3300048915 Bacteria 1240
220 Ga0496113_0001879 3300048916 Bacteria 11973
221 Ga0496115_0010495 3300048918 Bacteria 6923
222 Ga0496115_0939206 3300048918 Bacteria 665
223 Ga0501034_1016622 3300049571 Bacteria 712
224 Ga0501036_0882810 3300049572 Bacteria 734
225 Ga0501070_0159696 3300049586 Bacteria 1858
226 Ga0501207_082982 3300049654 Bacteria 619
227 Ga0501216_056840 3300049660 Bacteria 781
228 Ga0501238_037751 3300049671 Bacteria 707
229 Ga0501257_048266 3300049686 Bacteria 1058
230 Ga0501221_099064 3300049704 Bacteria 722
231 Ga0501225_0123266 3300049705 Bacteria 771
232 Ga0501083_0399812 3300049744 Bacteria 894
233 Ga0501083_0515845 3300049744 Bacteria 778
234 nmdc:mga05p37_113417_c1 3300050507 Bacteria 3333
235 nmdc:mga05p37_354193_c1 3300050507 Unclassified 1727
236 nmdc:mga05p37_383_c1 3300050507 Bacteria 47792
237 nmdc:mga06r32_420485_c1 3300050510 Bacteria 1318
238 nmdc:mga06r32_711_c2 3300050510 Bacteria 27826
239 nmdc:mga08y16_369_c1 3300050511 Bacteria 40785
240 nmdc:mga0n895_162874_c1 3300050512 Bacteria 2262
241 nmdc:mga0rr50_1012901_c1 3300050513 Bacteria 707
242 nmdc:mga0rr50_191750_c1 3300050513 Bacteria 1675
243 nmdc:mga0rr50_522490_c1 3300050513 Unclassified 1010
244 nmdc:mga08x19_163384_c1 3300050514 Bacteria 1513
245 nmdc:mga08x19_426762_c1 3300050514 Bacteria 931
246 nmdc:mga0a205_102838_c1 3300050515 Bacteria 2755
247 nmdc:mga0a205_71927_c1 3300050515 Bacteria 3340
248 Ga0500658_0099932 3300053134 Bacteria 1265
249 Ga0500568_0014797 3300053139 Bacteria 3510
250 Ga0500573_0282979 3300053140 Bacteria 838
251 Ga0500604_0000058 3300053151 Bacteria 40241
252 Ga0500616_0000087 3300053153 Bacteria 192225
253 Ga0500616_0002478 3300053153 Bacteria 15314
254 Ga0500611_008104 3300053727 Bacteria 1611
255 Ga0501082_0394519 3300060353 Bacteria 1208
256 Ga0466962_0001678 3300061719 Bacteria 10388

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_1016622 Ga0501034_1016622_318_695 125
2 3300053139 Ga0500568_0014797 Ga0500568_0014797_128_514 128
3 3300053153 Ga0500616_0000087 Ga0500616_0000087_51646_52032 128
4 3300020082 Ga0206353_10370279 Ga0206353_103702794 139
5 3300025909 Ga0207705_10107292 Ga0207705_101072924 139
6 3300041512 Ga0451853_1704552 Ga0451853_1704552_124_543 139
7 3300044683 Ga0466965_0039119 Ga0466965_0039119_1814_2302 139
8 3300014325 Ga0163163_11665113 Ga0163163_116651131 143
9 3300034817 Ga0373948_0089801 Ga0373948_0089801_225_701 143
10 3300046525 Ga0495663_0079362 Ga0495663_0079362_462_977 143
11 3300048911 Ga0496108_0484451 Ga0496108_0484451_161_649 143
12 3300048915 Ga0496112_0095731 Ga0496112_0095731_1854_2342 143
13 3300005618 Ga0068864_100733007 Ga0068864_1007330072 146
14 3300003759 Ga0055525_1000004 Ga0055525_1000004741 147
15 3300005293 Ga0065715_10220150 Ga0065715_102201501 147
16 3300005434 Ga0070709_10193633 Ga0070709_101936331 147
17 3300009148 Ga0105243_10000150 Ga0105243_1000015051 147
18 3300012513 Ga0157326_1000022 Ga0157326_10000226 147
19 3300025230 Ga0209563_100013 Ga0209563_100013743 147
20 3300048905 Ga0496102_0340395 Ga0496102_0340395_176_685 147
21 3300053134 Ga0500658_0099932 Ga0500658_0099932_470_916 147
22 3300049704 Ga0501221_099064 Ga0501221_099064_25_519 148
23 3300053151 Ga0500604_0000058 Ga0500604_0000058_13710_14177 148
24 3300006914 Ga0075436_100128982 Ga0075436_1001289822 149
25 3300007076 Ga0075435_100186161 Ga0075435_1001861612 149
26 3300050514 nmdc:mga08x19_163384_c1 nmdc:mga08x19_163384_c1_236_745 149
27 3300046616 Ga0495668_0197055 Ga0495668_0197055_601_1086 150
28 3300050513 nmdc:mga0rr50_1012901_c1 nmdc:mga0rr50_1012901_c1_175_681 151
29 3300005471 Ga0070698_101258606 Ga0070698_1012586061 152
30 3300005546 Ga0070696_100276997 Ga0070696_1002769971 152
31 3300005841 Ga0068863_100092336 Ga0068863_1000923366 152
32 3300009553 Ga0105249_10694812 Ga0105249_106948121 152
33 3300020070 Ga0206356_10421279 Ga0206356_104212794 152
34 3300025910 Ga0207684_10367805 Ga0207684_103678052 152
35 3300044683 Ga0466965_0084749 Ga0466965_0084749_435_935 152
36 3300044684 Ga0466966_0029762 Ga0466966_0029762_653_1237 152
37 3300044693 Ga0466961_0001940 Ga0466961_0001940_8890_9474 152
38 3300044693 Ga0466961_0271446 Ga0466961_0271446_351_851 152
39 3300044694 Ga0466963_0122690 Ga0466963_0122690_1059_1559 152
40 3300044694 Ga0466963_0561091 Ga0466963_0561091_156_740 152
41 3300044706 Ga0466964_0040912 Ga0466964_0040912_1062_1562 152
42 3300044719 Ga0466971_0257953 Ga0466971_0257953_90_674 152
43 3300044765 Ga0466970_0011367 Ga0466970_0011367_1687_2271 152
44 3300044842 Ga0466957_0014281 Ga0466957_0014281_744_1328 152
45 3300044842 Ga0466957_0041148 Ga0466957_0041148_1851_2351 152
46 3300045049 Ga0466959_0010368 Ga0466959_0010368_1750_2334 152
47 3300045836 Ga0466958_0003522 Ga0466958_0003522_6910_7410 152
48 3300045836 Ga0466958_0086696 Ga0466958_0086696_618_1202 152
49 3300050514 nmdc:mga08x19_426762_c1 nmdc:mga08x19_426762_c1_47_553 152
50 3300005440 Ga0070705_100271311 Ga0070705_1002713111 154
51 3300005518 Ga0070699_100840212 Ga0070699_1008402121 154
52 3300005546 Ga0070696_100010458 Ga0070696_1000104581 154
53 3300031239 Ga0265328_10001740 Ga0265328_100017406 154
54 3300031250 Ga0265331_10018920 Ga0265331_100189204 154
55 3300031251 Ga0265327_10000120 Ga0265327_1000012098 154
56 3300046559 Ga0495667_0790324 Ga0495667_0790324_64_537 154
57 3300046642 Ga0495634_0581674 Ga0495634_0581674_51_524 154
58 3300046689 Ga0495613_0029862 Ga0495613_0029862_3402_3875 154
59 3300046809 Ga0495600_0043967 Ga0495600_0043967_61_534 154
60 3300047315 Ga0495581_0396747 Ga0495581_0396747_249_722 154
61 iso_pu_bacteria 2885266251 2885270362 154
62 3300031548 Ga0307408_100298043 Ga0307408_1002980432 155
63 3300031731 Ga0307405_10721741 Ga0307405_107217411 155
64 3300031852 Ga0307410_10449819 Ga0307410_104498192 155
65 3300031901 Ga0307406_10198567 Ga0307406_101985672 155
66 3300031903 Ga0307407_10084278 Ga0307407_100842782 155
67 3300032002 Ga0307416_101312355 Ga0307416_1013123551 155
68 3300032126 Ga0307415_100494720 Ga0307415_1004947202 155
69 3300038996 Ga0242420_004322 Ga0242420_004322_647_1123 155
70 3300049654 Ga0501207_082982 Ga0501207_082982_27_545 155
71 3300049660 Ga0501216_056840 Ga0501216_056840_27_545 155
72 3300049686 Ga0501257_048266 Ga0501257_048266_178_696 155
73 3300049705 Ga0501225_0123266 Ga0501225_0123266_161_679 155
74 3300044735 Ga0466968_0019083 Ga0466968_0019083_1490_1972 156
75 3300005535 Ga0070684_100094069 Ga0070684_1000940692 158
76 3300035084 Ga0373928_0078494 Ga0373928_0078494_293_781 158
77 3300037466 Ga0395898_0054278 Ga0395898_0054278_1912_2403 158
78 3300048912 Ga0496109_0095827 Ga0496109_0095827_2196_2684 158
79 3300048913 Ga0496110_0092541 Ga0496110_0092541_2133_2621 158
80 3300048913 Ga0496110_0124333 Ga0496110_0124333_184_672 158
81 3300048915 Ga0496112_0137983 Ga0496112_0137983_147_635 158
82 3300032133 Ga0316583_10039192 Ga0316583_100391922 159
83 3300053140 Ga0500573_0282979 Ga0500573_0282979_184_684 159
84 3300005434 Ga0070709_10000748 Ga0070709_100007487 160
85 3300005435 Ga0070714_100003573 Ga0070714_1000035737 160
86 3300005437 Ga0070710_10002333 Ga0070710_100023334 160
87 3300005439 Ga0070711_100014874 Ga0070711_1000148741 160
88 3300005455 Ga0070663_100478281 Ga0070663_1004782812 160
89 3300006028 Ga0070717_11177105 Ga0070717_111771051 160
90 3300006173 Ga0070716_100164000 Ga0070716_1001640002 160
91 3300006175 Ga0070712_101361669 Ga0070712_1013616691 160
92 3300014325 Ga0163163_10957326 Ga0163163_109573262 160
93 3300021361 Ga0213872_10036436 Ga0213872_100364363 160
94 3300025898 Ga0207692_10000987 Ga0207692_100009878 160
95 3300025906 Ga0207699_10000435 Ga0207699_100004357 160
96 3300025915 Ga0207693_10091190 Ga0207693_100911904 160
97 3300025916 Ga0207663_10002427 Ga0207663_100024274 160
98 3300025929 Ga0207664_10005062 Ga0207664_100050624 160
99 3300025939 Ga0207665_10061174 Ga0207665_100611742 160
100 3300025939 Ga0207665_10662678 Ga0207665_106626781 160
101 3300039438 Ga0436360_0856114 Ga0436360_0856114_1223_1726 160
102 3300003773 Ga0055537_1000381 Ga0055537_100038114 161
103 3300005288 Ga0065714_10002738 Ga0065714_1000273813 161
104 3300015261 Ga0182006_1021587 Ga0182006_10215874 161
105 3300015262 Ga0182007_10005283 Ga0182007_100052832 161
106 3300039447 Ga0436361_0490018 Ga0436361_0490018_323_862 161
107 3300046557 Ga0495622_0098122 Ga0495622_0098122_767_1288 161
108 3300046678 Ga0495599_0135025 Ga0495599_0135025_572_1093 161
109 3300046809 Ga0495600_0283748 Ga0495600_0283748_73_594 161
110 3300053727 Ga0500611_008104 Ga0500611_008104_207_710 161
111 3300031251 Ga0265327_10007676 Ga0265327_100076767 162
112 3300005457 Ga0070662_100555138 Ga0070662_1005551382 163
113 3300006353 Ga0075370_10246259 Ga0075370_102462592 163
114 3300006844 Ga0075428_100006155 Ga0075428_1000061555 163
115 3300006847 Ga0075431_100001861 Ga0075431_10000186115 163
116 3300006880 Ga0075429_100001959 Ga0075429_10000195915 163
117 3300009094 Ga0111539_10003310 Ga0111539_100033105 163
118 3300009147 Ga0114129_10000199 Ga0114129_100001995 163
119 3300027907 Ga0207428_10003318 Ga0207428_1000331814 163
120 3300031730 Ga0307516_10108579 Ga0307516_101085792 163
121 3300031911 Ga0307412_10299563 Ga0307412_102995632 163
122 3300042439 Ga0439464_0024878 Ga0439464_0024878_658_1173 163
123 3300046462 Ga0495651_0122264 Ga0495651_0122264_342_878 163
124 3300050507 nmdc:mga05p37_383_c1 nmdc:mga05p37_383_c1_40711_41226 163
125 3300050510 nmdc:mga06r32_711_c2 nmdc:mga06r32_711_c2_2849_3364 163
126 3300050511 nmdc:mga08y16_369_c1 nmdc:mga08y16_369_c1_36798_37313 163
127 3300005440 Ga0070705_100325342 Ga0070705_1003253422 164
128 3300005445 Ga0070708_100029594 Ga0070708_1000295944 164
129 3300005467 Ga0070706_100002404 Ga0070706_10000240411 164
130 3300005467 Ga0070706_100555922 Ga0070706_1005559222 164
131 3300005468 Ga0070707_100005397 Ga0070707_1000053977 164
132 3300005518 Ga0070699_100012573 Ga0070699_1000125737 164
133 3300005536 Ga0070697_100047786 Ga0070697_1000477863 164
134 3300005546 Ga0070696_100282340 Ga0070696_1002823402 164
135 3300006038 Ga0075365_10065818 Ga0075365_100658183 164
136 3300006048 Ga0075363_100249832 Ga0075363_1002498322 164
137 3300006175 Ga0070712_100758497 Ga0070712_1007584972 164
138 3300006353 Ga0075370_10645492 Ga0075370_106454922 164
139 3300009147 Ga0114129_12348164 Ga0114129_123481642 164
140 3300011119 Ga0105246_10457165 Ga0105246_104571652 164
141 3300025910 Ga0207684_10045981 Ga0207684_100459813 164
142 3300025915 Ga0207693_10374992 Ga0207693_103749922 164
143 3300025922 Ga0207646_10061126 Ga0207646_100611265 164
144 3300025939 Ga0207665_10176567 Ga0207665_101765672 164
145 3300031903 Ga0307407_10766461 Ga0307407_107664612 164
146 3300032133 Ga0316583_10000299 Ga0316583_100002996 164
147 3300035085 Ga0373929_0015801 Ga0373929_0015801_196_702 164
148 3300035090 Ga0373949_0007609 Ga0373949_0007609_693_1199 164
149 3300037853 Ga0436364_0265631 Ga0436364_0265631_2261_2779 164
150 3300037853 Ga0436364_0522439 Ga0436364_0522439_334_852 164
151 3300038996 Ga0242420_009933 Ga0242420_009933_76_582 164
152 3300044673 Ga0453683_0266661 Ga0453683_0266661_342_848 164
153 3300048910 Ga0496107_0330295 Ga0496107_0330295_19_525 164
154 3300048918 Ga0496115_0939206 Ga0496115_0939206_35_541 164
155 3300049744 Ga0501083_0399812 Ga0501083_0399812_116_631 164
156 3300049744 Ga0501083_0515845 Ga0501083_0515845_181_696 164
157 3300060353 Ga0501082_0394519 Ga0501082_0394519_344_859 164
158 3300005293 Ga0065715_10094976 Ga0065715_100949762 165
159 3300005327 Ga0070658_10008075 Ga0070658_100080756 165
160 3300005327 Ga0070658_10855233 Ga0070658_108552331 165
161 3300005335 Ga0070666_10308259 Ga0070666_103082592 165
162 3300005339 Ga0070660_100172869 Ga0070660_1001728692 165
163 3300005340 Ga0070689_100146904 Ga0070689_1001469042 165
164 3300005347 Ga0070668_100069283 Ga0070668_1000692833 165
165 3300005435 Ga0070714_100001589 Ga0070714_1000015897 165
166 3300005435 Ga0070714_100691160 Ga0070714_1006911602 165
167 3300005444 Ga0070694_100060464 Ga0070694_1000604644 165
168 3300005445 Ga0070708_100813507 Ga0070708_1008135072 165
169 3300005457 Ga0070662_100009125 Ga0070662_1000091256 165
170 3300005530 Ga0070679_100213434 Ga0070679_1002134342 165
171 3300005530 Ga0070679_100696322 Ga0070679_1006963221 165
172 3300005539 Ga0068853_100204652 Ga0068853_1002046523 165
173 3300005546 Ga0070696_100283076 Ga0070696_1002830762 165
174 3300005549 Ga0070704_100200679 Ga0070704_1002006792 165
175 3300005563 Ga0068855_100081819 Ga0068855_1000818192 165
176 3300005616 Ga0068852_100499505 Ga0068852_1004995051 165
177 3300005616 Ga0068852_100623574 Ga0068852_1006235741 165
178 3300005617 Ga0068859_100012064 Ga0068859_1000120644 165
179 3300005618 Ga0068864_101304971 Ga0068864_1013049712 165
180 3300005718 Ga0068866_10232678 Ga0068866_102326782 165
181 3300005842 Ga0068858_100431387 Ga0068858_1004313872 165
182 3300006844 Ga0075428_100104380 Ga0075428_1001043803 165
183 3300006847 Ga0075431_100024684 Ga0075431_1000246844 165
184 3300006852 Ga0075433_10119938 Ga0075433_101199384 165
185 3300006871 Ga0075434_100021100 Ga0075434_1000211005 165
186 3300006871 Ga0075434_100028729 Ga0075434_1000287292 165
187 3300006931 Ga0097620_100012064 Ga0097620_1000120644 165
188 3300009147 Ga0114129_10002529 Ga0114129_1000252922 165
189 3300009147 Ga0114129_10263625 Ga0114129_102636253 165
190 3300009545 Ga0105237_10138392 Ga0105237_101383923 165
191 3300010375 Ga0105239_10008939 Ga0105239_1000893910 165
192 3300013100 Ga0157373_10024950 Ga0157373_100249502 165
193 3300013102 Ga0157371_10076252 Ga0157371_100762524 165
194 3300013102 Ga0157371_10130422 Ga0157371_101304222 165
195 3300013105 Ga0157369_10000541 Ga0157369_1000054141 165
196 3300013105 Ga0157369_10222172 Ga0157369_102221724 165
197 3300013105 Ga0157369_11067691 Ga0157369_110676912 165
198 3300013307 Ga0157372_10001980 Ga0157372_1000198017 165
199 3300013307 Ga0157372_10096434 Ga0157372_100964344 165
200 3300013307 Ga0157372_10133452 Ga0157372_101334522 165
201 3300013307 Ga0157372_10382168 Ga0157372_103821683 165
202 3300020081 Ga0206354_10074385 Ga0206354_100743851 165
203 3300025914 Ga0207671_10211772 Ga0207671_102117722 165
204 3300025917 Ga0207660_10035525 Ga0207660_100355254 165
205 3300025919 Ga0207657_10071142 Ga0207657_100711422 165
206 3300025921 Ga0207652_10293561 Ga0207652_102935612 165
207 3300025921 Ga0207652_10480533 Ga0207652_104805331 165
208 3300025928 Ga0207700_10492644 Ga0207700_104926442 165
209 3300025929 Ga0207664_10045065 Ga0207664_100450652 165
210 3300025933 Ga0207706_10019828 Ga0207706_100198286 165
211 3300025936 Ga0207670_10483451 Ga0207670_104834512 165
212 3300025949 Ga0207667_10180327 Ga0207667_101803272 165
213 3300025961 Ga0207712_10087816 Ga0207712_100878162 165
214 3300025972 Ga0207668_10066045 Ga0207668_100660453 165
215 3300026088 Ga0207641_10858419 Ga0207641_108584192 165
216 3300035691 Ga0373931_0007125 Ga0373931_0007125_166_675 165
217 3300037312 Ga0395899_0031508 Ga0395899_0031508_3016_3597 165
218 3300037418 Ga0395900_0008593 Ga0395900_0008593_4195_4767 165
219 3300037418 Ga0395900_0086981 Ga0395900_0086981_511_1086 165
220 3300037466 Ga0395898_0004331 Ga0395898_0004331_4513_5094 165
221 3300037471 Ga0395905_0217837 Ga0395905_0217837_955_1464 165
222 3300038443 Ga0395901_0000319 Ga0395901_0000319_58078_58653 165
223 3300038443 Ga0395901_0588975 Ga0395901_0588975_256_765 165
224 3300038443 Ga0395901_0599786 Ga0395901_0599786_86_667 165
225 3300042157 Ga0439458_0159193 Ga0439458_0159193_13_522 165
226 3300044658 Ga0466972_0050984 Ga0466972_0050984_705_1286 165
227 3300044684 Ga0466966_0001782 Ga0466966_0001782_1282_1863 165
228 3300044694 Ga0466963_0640207 Ga0466963_0640207_143_724 165
229 3300044719 Ga0466971_0021928 Ga0466971_0021928_474_1055 165
230 3300045836 Ga0466958_0052722 Ga0466958_0052722_1518_2099 165
231 3300045976 Ga0466967_0130212 Ga0466967_0130212_1177_1758 165
232 3300048905 Ga0496102_0002168 Ga0496102_0002168_9927_10436 165
233 3300048907 Ga0496104_0018711 Ga0496104_0018711_903_1412 165
234 3300048908 Ga0496105_0106207 Ga0496105_0106207_747_1256 165
235 3300048910 Ga0496107_0146401 Ga0496107_0146401_555_1064 165
236 3300048912 Ga0496109_0005313 Ga0496109_0005313_4786_5295 165
237 3300048913 Ga0496110_0029093 Ga0496110_0029093_2924_3433 165
238 3300048914 Ga0496111_0004841 Ga0496111_0004841_4266_4775 165
239 3300048915 Ga0496112_0440862 Ga0496112_0440862_594_1103 165
240 3300048916 Ga0496113_0001879 Ga0496113_0001879_3332_3841 165
241 3300048918 Ga0496115_0010495 Ga0496115_0010495_4506_5015 165
242 3300049572 Ga0501036_0882810 Ga0501036_0882810_101_616 165
243 3300049586 Ga0501070_0159696 Ga0501070_0159696_89_604 165
244 3300050507 nmdc:mga05p37_113417_c1 nmdc:mga05p37_113417_c1_1852_2361 165
245 3300050507 nmdc:mga05p37_354193_c1 nmdc:mga05p37_354193_c1_1046_1555 165
246 3300050510 nmdc:mga06r32_420485_c1 nmdc:mga06r32_420485_c1_273_782 165
247 3300050512 nmdc:mga0n895_162874_c1 nmdc:mga0n895_162874_c1_1046_1555 165
248 3300050513 nmdc:mga0rr50_191750_c1 nmdc:mga0rr50_191750_c1_371_880 165
249 3300050513 nmdc:mga0rr50_522490_c1 nmdc:mga0rr50_522490_c1_60_569 165
250 3300050515 nmdc:mga0a205_102838_c1 nmdc:mga0a205_102838_c1_956_1465 165
251 3300050515 nmdc:mga0a205_71927_c1 nmdc:mga0a205_71927_c1_83_592 165
252 3300061719 Ga0466962_0001678 Ga0466962_0001678_9718_10299 165
253 3300003323 rootH1_10075262 rootH1_100752627 166
254 3300046616 Ga0495668_0000313 Ga0495668_0000313_7610_8110 166
255 3300047472 Ga0495686_0000442 Ga0495686_0000442_18007_18507 166
256 3300049671 Ga0501238_037751 Ga0501238_037751_157_690 166
257 3300053153 Ga0500616_0002478 Ga0500616_0002478_7785_8285 166

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23451

140

191

0.92

PF01883

FeS_assembly_P

Iron-sulfur cluster assembly protein

27

100

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cu6-assembly1.cif.gz_A crystal structure of the dtdp-4-keto-l-rhamnose reductase-related protein from thermus thermophilus hb8 0.8284 9 97
3lno-assembly1.cif.gz_A crystal structure of domain of unknown function duf59 from bacillus anthracis 0.7939 9 99
6tbn-assembly1.cif.gz_A crystal structure of ciao1-ciao2b cia core complex 0.7931 5 87
2cu6-assembly1.cif.gz_A crystal structure of the dtdp-4-keto-l-rhamnose reductase-related protein from thermus thermophilus hb8 0.7882 9 97
1wcj-assembly1.cif.gz_A conserved hypothetical protein tm0487 from thermotoga maritima 0.7819 3 102
ID Description Score Start End Superfamily
af_P76080_10_106_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.9283 6 103 3.30.300.130
af_P76080_10_106_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.9102 6 103 3.30.300.130
af_Q2FZT0_1_88_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.8771 20 101 3.30.300.130
af_Q58529_1_94_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.8648 6 84 3.30.300.130
af_O53157_4_110_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.8521 11 103 3.30.300.130
ID Description Score Start End GO Terms
AF-A0A2E5G8P9-F1-model_v4 Phenylacetate-CoA oxygenase subunit PaaJ 0.9502 7 166
AF-A0A836TPH9-F1-model_v4 Phenylacetate-CoA oxygenase subunit PaaJ 0.9479 9 166
AF-A0A1G7NY13-F1-model_v4 Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD 0.9469 5 166
AF-A0A2A4ZPZ8-F1-model_v4 deleted 0.9461 6 166
AF-A6F430-F1-model_v4 Ring-hydroxylation complex protein 3 0.9443 6 166

Feature Viewer

pLDDT pTM Quality
82.02 0.7 High
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Predicted Structure (AlphaFold2)

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