F367136

General Info

Members Datasets Scaffolds Average Seq Length
257 155 514 659

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100009239|Ga0070697_1000092393
Length 755
Sequence MDCRTPKAPASERGRYRNKRHCKALAESAVHPAVLSFFCSILRFLVKGEWNLAKRANKTAENPTFKKRVQTESEGVPERRYVSFDEEEAAVAPRKARLVSDGRDESGAPAAVQVDMREVFGPGGLLERSMIGGYEHRVAQLEMAEMVHDAFQTRHHAIVEAGTGTGKTLAYLLPAICSGRRVVISTATKSLQEQLYQKDIPFLKKHFAPNLEVAVMKGRANFLCRTKLHQMADSPMLKGMEELDAFRQMREWAKLTETGDRAELTFLPDDSDLWARLDARRDTCTGQKCPDFNDCFVTAMHGRAREADLIIVNHHLFFADLALKHDDFGSILPEYSAVVFDEAHEIEDVASDYFGRQISNYRFEELARDADQTLRILKLGSPALLRRTQRLRERSRAFFESFPPREGRYPFSRADRGAFVEQHHEAYTGLMDALKSLETGFAALTQKPEELTRLGRRSFELRQELSFLFESNERNFVYWYERRSKGVFLAATPIDVSQILRERLFEQFDTVVLTSATLTVGNRFDYIRQRLGLDNAKERTLPPEFQYGEQALFYLPQRMPDVRDAGFASRAADEILRLLELSEGRAFCLFTSYAQMKDLYQRVSARSPYPLMLQGTAPRSALLERFKTTPNAVLFATASFWQGVDVPGEQLSCVIVDRLPFAVPSDPIVAARVNALNEEGRNAFAEYQVPQAVLALKQGFGRLIRAKTDRGVLALLDNRIQRMAYGKIFIESLPKYATTNELNAVERFLAAAKTA

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
79 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
80 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
87 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
88 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
89 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
97 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
132 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
133 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
138 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
139 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.22
Metatranscriptomes 0.78
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.78
Rhizosphere 94.94
Stem 0
Stem Tuber 0
Unclassified 7.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100009239 3300005536 Bacteria 7704
2 Ga0070658_10007213 3300005327 Bacteria 8972
3 Ga0070683_100000011 3300005329 Bacteria 283682
4 Ga0070683_100009939 3300005329 Bacteria 8158
5 Ga0070683_100042721 3300005329 Bacteria 4175
6 Ga0070666_10011210 3300005335 Bacteria 5620
7 Ga0070680_100033683 3300005336 Bacteria 4131
8 Ga0070680_100044016 3300005336 Bacteria 3627
9 Ga0070691_10003591 3300005341 Bacteria 7005
10 Ga0070703_10001720 3300005406 Bacteria 6497
11 Ga0070714_100093779 3300005435 Bacteria 2633
12 Ga0070713_100006661 3300005436 Bacteria 8036
13 Ga0070713_100106564 3300005436 Bacteria 2437
14 Ga0070710_10032403 3300005437 Unclassified 2831
15 Ga0070708_100050592 3300005445 Bacteria 3680
16 Ga0070681_10046224 3300005458 Bacteria 4353
17 Ga0070681_10056705 3300005458 Bacteria 3898
18 Ga0068867_100007917 3300005459 Bacteria 7505
19 Ga0070706_100023442 3300005467 Bacteria 5684
20 Ga0070707_100000983 3300005468 Bacteria 28206
21 Ga0070707_100069663 3300005468 Unclassified 3387
22 Ga0070698_100001265 3300005471 Bacteria 28250
23 Ga0070698_100002640 3300005471 Bacteria 19752
24 Ga0070699_100005428 3300005518 Bacteria 11178
25 Ga0070699_100011364 3300005518 Bacteria 7688
26 Ga0070679_100008413 3300005530 Bacteria 9712
27 Ga0070684_100000001 3300005535 Bacteria 300240
28 Ga0070697_100004327 3300005536 Bacteria 10895
29 Ga0070696_100000818 3300005546 Bacteria 20048
30 Ga0070693_100000069 3300005547 Bacteria 42305
31 Ga0070665_100048994 3300005548 Bacteria 4240
32 Ga0070665_100051724 3300005548 Bacteria 4120
33 Ga0070704_100001813 3300005549 Bacteria 11747
34 Ga0068855_100006374 3300005563 Bacteria 14378
35 Ga0068855_100109801 3300005563 Unclassified 3167
36 Ga0068856_100022203 3300005614 Bacteria 6170
37 Ga0068852_100004246 3300005616 Bacteria 10116
38 Ga0068863_100115823 3300005841 Bacteria 2554
39 Ga0068858_100010144 3300005842 Bacteria 8942
40 Ga0070717_10028711 3300006028 Bacteria 4456
41 Ga0070716_100008749 3300006173 Bacteria 5030
42 Ga0070716_100025685 3300006173 Bacteria 3146
43 Ga0070712_100011101 3300006175 Bacteria 5702
44 Ga0075434_100019308 3300006871 Bacteria 6596
45 Ga0075429_100035620 3300006880 Bacteria 4329
46 Ga0075436_100001838 3300006914 Bacteria 14550
47 Ga0099795_10004921 3300007788 Bacteria 3500
48 Ga0105240_10001515 3300009093 Bacteria 39538
49 Ga0105240_10002782 3300009093 Bacteria 27645
50 Ga0105240_10040230 3300009093 Bacteria 5982
51 Ga0111539_10169913 3300009094 Bacteria 2548
52 Ga0105245_10013254 3300009098 Bacteria 7184
53 Ga0105245_10133264 3300009098 Unclassified 2332
54 Ga0114129_10027396 3300009147 Bacteria 8068
55 Ga0105248_10057109 3300009177 Bacteria 4380
56 Ga0105248_10060778 3300009177 Bacteria 4242
57 Ga0105248_10191919 3300009177 Unclassified 2302
58 Ga0105237_10016135 3300009545 Bacteria 7768
59 Ga0105237_10074946 3300009545 Bacteria 3376
60 Ga0105238_10009540 3300009551 Bacteria 9711
61 Ga0105238_10027644 3300009551 Bacteria 5782
62 Ga0105249_10064886 3300009553 Bacteria 3358
63 Ga0157370_10062444 3300013104 Unclassified 3533
64 Ga0157370_10072156 3300013104 Bacteria 3258
65 Ga0157369_10009518 3300013105 Bacteria 11110
66 Ga0157369_10061903 3300013105 Bacteria 4033
67 Ga0157374_10016928 3300013296 Bacteria 6417
68 Ga0157374_10022230 3300013296 Bacteria 5656
69 Ga0157374_10066491 3300013296 Bacteria 3388
70 Ga0157378_10000122 3300013297 Bacteria 75146
71 Ga0157378_10008941 3300013297 Bacteria 8719
72 Ga0163162_10045783 3300013306 Bacteria 4383
73 Ga0157372_10011082 3300013307 Bacteria 9591
74 Ga0157372_10011791 3300013307 Bacteria 9312
75 Ga0157375_10056733 3300013308 Bacteria 3869
76 Ga0157376_10000057 3300014969 Bacteria 97940
77 Ga0157376_10004160 3300014969 Bacteria 10033
78 Ga0157376_10004167 3300014969 Bacteria 10024
79 Ga0213876_10005305 3300021384 Bacteria 7094
80 Ga0213875_10011850 3300021388 Unclassified 4322
81 Ga0213875_10016961 3300021388 Bacteria 3526
82 Ga0207699_10011814 3300025906 Bacteria 4425
83 Ga0207684_10015622 3300025910 Bacteria 6535
84 Ga0207707_10003554 3300025912 Bacteria 13807
85 Ga0207707_10013327 3300025912 Bacteria 7166
86 Ga0207695_10003356 3300025913 Bacteria 22617
87 Ga0207695_10003465 3300025913 Bacteria 22202
88 Ga0207695_10004712 3300025913 Bacteria 18475
89 Ga0207671_10012323 3300025914 Bacteria 6881
90 Ga0207693_10011682 3300025915 Bacteria 7104
91 Ga0207693_10060669 3300025915 Bacteria 2963
92 Ga0207657_10004678 3300025919 Bacteria 14448
93 Ga0207657_10009266 3300025919 Bacteria 9917
94 Ga0207652_10005104 3300025921 Bacteria 10656
95 Ga0207652_10013129 3300025921 Bacteria 6705
96 Ga0207652_10025087 3300025921 Bacteria 4954
97 Ga0207646_10000131 3300025922 Bacteria 101819
98 Ga0207646_10000282 3300025922 Bacteria 69731
99 Ga0207694_10001736 3300025924 Bacteria 18273
100 Ga0207694_10024127 3300025924 Bacteria 4618
101 Ga0207687_10000181 3300025927 Bacteria 41696
102 Ga0207700_10050545 3300025928 Bacteria 3098
103 Ga0207665_10000156 3300025939 Bacteria 46270
104 Ga0207665_10005058 3300025939 Bacteria 8802
105 Ga0207711_10007273 3300025941 Bacteria 9279
106 Ga0207661_10000016 3300025944 Bacteria 305159
107 Ga0207661_10000376 3300025944 Bacteria 28667
108 Ga0207667_10000253 3300025949 Bacteria 75314
109 Ga0207667_10001147 3300025949 Bacteria 33314
110 Ga0207667_10012933 3300025949 Bacteria 9585
111 Ga0207667_10046685 3300025949 Bacteria 4587
112 Ga0207639_10010631 3300026041 Bacteria 6373
113 Ga0207702_10006702 3300026078 Bacteria 9895
114 Ga0207641_10040193 3300026088 Bacteria 3915
115 Ga0207641_10142663 3300026088 Bacteria 2163
116 Ga0207674_10000097 3300026116 Bacteria 98549
117 Ga0207698_10004146 3300026142 Bacteria 8805
118 Ga0265354_1002119 3300028016 Bacteria 2563
119 Ga0268266_10003414 3300028379 Bacteria 15899
120 Ga0268264_10028494 3300028381 Unclassified 4569
121 Ga0268264_10086884 3300028381 Bacteria 2688
122 Ga0265318_10000123 3300028577 Bacteria 71866
123 Ga0265323_10005781 3300028653 Bacteria 5232
124 Ga0265336_10002154 3300028666 Bacteria 8322
125 Ga0265338_10008555 3300028800 Bacteria 12391
126 Ga0265765_1000068 3300030879 Bacteria 5418
127 Ga0265760_10000009 3300031090 Bacteria 108179
128 Ga0265320_10000100 3300031240 Bacteria 73384
129 Ga0265325_10000905 3300031241 Bacteria 21387
130 Ga0265325_10026345 3300031241 Bacteria 3150
131 Ga0265325_10028665 3300031241 Bacteria 2998
132 Ga0265329_10000840 3300031242 Bacteria 15544
133 Ga0265329_10018947 3300031242 Bacteria 2346
134 Ga0265340_10000846 3300031247 Bacteria 17411
135 Ga0265340_10018344 3300031247 Bacteria 3610
136 Ga0265339_10000170 3300031249 Bacteria 55127
137 Ga0265339_10008586 3300031249 Bacteria 6489
138 Ga0265331_10000047 3300031250 Bacteria 183230
139 Ga0265316_10000204 3300031344 Bacteria 69064
140 Ga0265316_10027289 3300031344 Bacteria 4731
141 Ga0265316_10050657 3300031344 Bacteria 3264
142 Ga0265316_10051405 3300031344 Bacteria 3237
143 Ga0265316_10059866 3300031344 Bacteria 2961
144 Ga0265313_10002769 3300031595 Bacteria 14783
145 Ga0265314_10000131 3300031711 Bacteria 113375
146 Ga0265314_10002272 3300031711 Bacteria 19894
147 Ga0265314_10002638 3300031711 Bacteria 18054
148 Ga0265342_10000158 3300031712 Bacteria 76866
149 Ga0373934_0003614 3300035086 Bacteria 5689
150 Ga0373953_0009973 3300035117 Bacteria 3292
151 Ga0373956_0002473 3300035119 Bacteria 7514
152 Ga0373957_0024509 3300035120 Bacteria 2167
153 Ga0373955_0001366 3300035172 Bacteria 10369
154 Ga0373931_0031094 3300035691 Bacteria 2753
155 Ga0373927_0003249 3300035695 Bacteria 11693
156 Ga0373947_0009413 3300035725 Bacteria 5613
157 Ga0373937_0000049 3300036401 Bacteria 106227
158 Ga0373937_0000539 3300036401 Bacteria 33628
159 Ga0373937_0099993 3300036401 Bacteria 2690
160 Ga0373925_0001503 3300037068 Bacteria 19981
161 Ga0373925_0075575 3300037068 Bacteria 2553
162 Ga0436364_0265522 3300037853 Bacteria 6427
163 Ga0436364_0506857 3300037853 Bacteria 11559
164 Ga0436364_0511148 3300037853 Bacteria 6121
165 Ga0436364_0546686 3300037853 Unclassified 2648
166 Ga0436364_0856627 3300037853 Bacteria 7310
167 Ga0436364_0992705 3300037853 Bacteria 6507
168 Ga0436365_0500240 3300039437 Bacteria 4549
169 Ga0436365_1200822 3300039437 Bacteria 15628
170 Ga0451577_0087990 3300042876 Bacteria 2771
171 Ga0453683_0006602 3300044673 Bacteria 7946
172 Ga0466966_0016373 3300044684 Bacteria 4900
173 Ga0453684_0007016 3300044712 Bacteria 21048
174 Ga0453684_0015360 3300044712 Bacteria 12127
175 Ga0451576_0016787 3300045051 Bacteria 8070
176 Ga0495651_0000604 3300046462 Bacteria 27917
177 Ga0495651_0002436 3300046462 Bacteria 14364
178 Ga0495651_0006480 3300046462 Bacteria 8946
179 Ga0495651_0016261 3300046462 Bacteria 5762
180 Ga0495651_0024961 3300046462 Bacteria 4650
181 Ga0495651_0041307 3300046462 Bacteria 3583
182 Ga0495653_0032054 3300046463 Bacteria 4176
183 Ga0495580_0002713 3300046472 Bacteria 15302
184 Ga0495580_0003381 3300046472 Bacteria 13631
185 Ga0495580_0084438 3300046472 Unclassified 2212
186 Ga0495582_0000034 3300046473 Bacteria 72053
187 Ga0495582_0016853 3300046473 Bacteria 4001
188 Ga0495639_0005345 3300046475 Bacteria 5530
189 Ga0495662_0003213 3300046476 Bacteria 8251
190 Ga0495664_0010063 3300046477 Bacteria 5305
191 Ga0495594_0016198 3300046499 Unclassified 3925
192 Ga0495608_0012607 3300046511 Bacteria 5864
193 Ga0495608_0057628 3300046511 Bacteria 2563
194 Ga0495628_0000752 3300046516 Bacteria 29928
195 Ga0495628_0068036 3300046516 Unclassified 2780
196 Ga0495630_0019774 3300046517 Unclassified 4954
197 Ga0495630_0022354 3300046517 Bacteria 4669
198 Ga0495666_0022657 3300046526 Bacteria 3110
199 Ga0495652_0003733 3300046529 Bacteria 14903
200 Ga0495652_0006846 3300046529 Bacteria 10557
201 Ga0495652_0038168 3300046529 Bacteria 4163
202 Ga0495665_0007618 3300046531 Bacteria 5864
203 Ga0495640_0007353 3300046533 Bacteria 8669
204 Ga0495640_0032791 3300046533 Bacteria 3696
205 Ga0495587_0000181 3300046536 Bacteria 46248
206 Ga0495587_0000895 3300046536 Bacteria 19737
207 Ga0495587_0006738 3300046536 Bacteria 7478
208 Ga0495645_0007860 3300046543 Bacteria 7419
209 Ga0495645_0044595 3300046543 Bacteria 3234
210 Ga0495667_0001033 3300046559 Bacteria 18038
211 Ga0495667_0007870 3300046559 Bacteria 7224
212 Ga0495634_0085672 3300046642 Unclassified 2053
213 Ga0495635_0024576 3300046663 Bacteria 4199
214 Ga0495657_0058684 3300046675 Bacteria 2554
215 Ga0495599_0006931 3300046678 Bacteria 6851
216 Ga0495599_0010156 3300046678 Bacteria 5766
217 Ga0495623_0014355 3300046679 Bacteria 5128
218 Ga0495646_0026125 3300046680 Bacteria 3668
219 Ga0495658_0002738 3300046683 Bacteria 8870
220 Ga0495613_0003495 3300046689 Bacteria 11759
221 Ga0495613_0019989 3300046689 Bacteria 4991
222 Ga0495624_0004759 3300046690 Bacteria 9875
223 Ga0495600_0032953 3300046809 Unclassified 3362
224 Ga0495581_0029028 3300047315 Unclassified 3207
225 Ga0495604_0003263 3300047317 Bacteria 12966
226 Ga0495604_0004145 3300047317 Bacteria 11512
227 Ga0495604_0030348 3300047317 Bacteria 4293
228 Ga0495604_0081511 3300047317 Bacteria 2422
229 Ga0495674_0015533 3300047319 Bacteria 7114
230 Ga0495674_0016845 3300047319 Bacteria 6815
231 Ga0495674_0019552 3300047319 Bacteria 6285
232 Ga0495676_0034017 3300047321 Unclassified 4281
233 Ga0495680_0000804 3300047322 Bacteria 35012
234 Ga0495680_0003185 3300047322 Bacteria 16332
235 Ga0495680_0008013 3300047322 Bacteria 9632
236 Ga0495675_0000423 3300047444 Bacteria 28640
237 Ga0495684_0015364 3300047471 Bacteria 5892
238 Ga0495684_0022073 3300047471 Bacteria 4900
239 Ga0495684_0028983 3300047471 Bacteria 4248
240 Ga0495684_0064936 3300047471 Bacteria 2774
241 Ga0495593_0018033 3300047673 Bacteria 3970
242 Ga0495602_0000163 3300048088 Bacteria 62056
243 Ga0495602_0010802 3300048088 Bacteria 9462
244 Ga0495602_0022014 3300048088 Bacteria 6251
245 Ga0495602_0022341 3300048088 Bacteria 6195
246 Ga0495602_0081149 3300048088 Unclassified 2728
247 Ga0495614_0027337 3300048089 Bacteria 2460
248 Ga0496102_0092860 3300048905 Bacteria 2795
249 Ga0496115_0026399 3300048918 Unclassified 4533
250 Ga0501046_0155262 3300049580 Bacteria 1725
251 nmdc:mga09592_72005_c1 3300050508 Bacteria 2934
252 nmdc:mga0n895_25933_c1 3300050512 Bacteria 5543
253 nmdc:mga0n895_59606_c1 3300050512 Bacteria 3765
254 nmdc:mga08x19_1591_c1 3300050514 Bacteria 14081
255 nmdc:mga08x19_315_c1 3300050514 Bacteria 35192
256 nmdc:mga08x19_70775_c1 3300050514 Unclassified 2273
257 Ga0495601_0018375 3300053077 Bacteria 4255
258 Ga0070697_100009239
259 Ga0070658_10007213
260 Ga0070683_100000011
261 Ga0070683_100009939
262 Ga0070683_100042721
263 Ga0070666_10011210
264 Ga0070680_100033683
265 Ga0070680_100044016
266 Ga0070691_10003591
267 Ga0070703_10001720
268 Ga0070714_100093779
269 Ga0070713_100006661
270 Ga0070713_100106564
271 Ga0070710_10032403
272 Ga0070708_100050592
273 Ga0070681_10046224
274 Ga0070681_10056705
275 Ga0068867_100007917
276 Ga0070706_100023442
277 Ga0070707_100000983
278 Ga0070707_100069663
279 Ga0070698_100001265
280 Ga0070698_100002640
281 Ga0070699_100005428
282 Ga0070699_100011364
283 Ga0070679_100008413
284 Ga0070684_100000001
285 Ga0070697_100004327
286 Ga0070696_100000818
287 Ga0070693_100000069
288 Ga0070665_100048994
289 Ga0070665_100051724
290 Ga0070704_100001813
291 Ga0068855_100006374
292 Ga0068855_100109801
293 Ga0068856_100022203
294 Ga0068852_100004246
295 Ga0068863_100115823
296 Ga0068858_100010144
297 Ga0070717_10028711
298 Ga0070716_100008749
299 Ga0070716_100025685
300 Ga0070712_100011101
301 Ga0075434_100019308
302 Ga0075429_100035620
303 Ga0075436_100001838
304 Ga0099795_10004921
305 Ga0105240_10001515
306 Ga0105240_10002782
307 Ga0105240_10040230
308 Ga0111539_10169913
309 Ga0105245_10013254
310 Ga0105245_10133264
311 Ga0114129_10027396
312 Ga0105248_10057109
313 Ga0105248_10060778
314 Ga0105248_10191919
315 Ga0105237_10016135
316 Ga0105237_10074946
317 Ga0105238_10009540
318 Ga0105238_10027644
319 Ga0105249_10064886
320 Ga0157370_10062444
321 Ga0157370_10072156
322 Ga0157369_10009518
323 Ga0157369_10061903
324 Ga0157374_10016928
325 Ga0157374_10022230
326 Ga0157374_10066491
327 Ga0157378_10000122
328 Ga0157378_10008941
329 Ga0163162_10045783
330 Ga0157372_10011082
331 Ga0157372_10011791
332 Ga0157375_10056733
333 Ga0157376_10000057
334 Ga0157376_10004160
335 Ga0157376_10004167
336 Ga0213876_10005305
337 Ga0213875_10011850
338 Ga0213875_10016961
339 Ga0207699_10011814
340 Ga0207684_10015622
341 Ga0207707_10003554
342 Ga0207707_10013327
343 Ga0207695_10003356
344 Ga0207695_10003465
345 Ga0207695_10004712
346 Ga0207671_10012323
347 Ga0207693_10011682
348 Ga0207693_10060669
349 Ga0207657_10004678
350 Ga0207657_10009266
351 Ga0207652_10005104
352 Ga0207652_10013129
353 Ga0207652_10025087
354 Ga0207646_10000131
355 Ga0207646_10000282
356 Ga0207694_10001736
357 Ga0207694_10024127
358 Ga0207687_10000181
359 Ga0207700_10050545
360 Ga0207665_10000156
361 Ga0207665_10005058
362 Ga0207711_10007273
363 Ga0207661_10000016
364 Ga0207661_10000376
365 Ga0207667_10000253
366 Ga0207667_10001147
367 Ga0207667_10012933
368 Ga0207667_10046685
369 Ga0207639_10010631
370 Ga0207702_10006702
371 Ga0207641_10040193
372 Ga0207641_10142663
373 Ga0207674_10000097
374 Ga0207698_10004146
375 Ga0265354_1002119
376 Ga0268266_10003414
377 Ga0268264_10028494
378 Ga0268264_10086884
379 Ga0265318_10000123
380 Ga0265323_10005781
381 Ga0265336_10002154
382 Ga0265338_10008555
383 Ga0265765_1000068
384 Ga0265760_10000009
385 Ga0265320_10000100
386 Ga0265325_10000905
387 Ga0265325_10026345
388 Ga0265325_10028665
389 Ga0265329_10000840
390 Ga0265329_10018947
391 Ga0265340_10000846
392 Ga0265340_10018344
393 Ga0265339_10000170
394 Ga0265339_10008586
395 Ga0265331_10000047
396 Ga0265316_10000204
397 Ga0265316_10027289
398 Ga0265316_10050657
399 Ga0265316_10051405
400 Ga0265316_10059866
401 Ga0265313_10002769
402 Ga0265314_10000131
403 Ga0265314_10002272
404 Ga0265314_10002638
405 Ga0265342_10000158
406 Ga0373934_0003614
407 Ga0373953_0009973
408 Ga0373956_0002473
409 Ga0373957_0024509
410 Ga0373955_0001366
411 Ga0373931_0031094
412 Ga0373927_0003249
413 Ga0373947_0009413
414 Ga0373937_0000049
415 Ga0373937_0000539
416 Ga0373937_0099993
417 Ga0373925_0001503
418 Ga0373925_0075575
419 Ga0436364_0265522
420 Ga0436364_0506857
421 Ga0436364_0511148
422 Ga0436364_0546686
423 Ga0436364_0856627
424 Ga0436364_0992705
425 Ga0436365_0500240
426 Ga0436365_1200822
427 Ga0451577_0087990
428 Ga0453683_0006602
429 Ga0466966_0016373
430 Ga0453684_0007016
431 Ga0453684_0015360
432 Ga0451576_0016787
433 Ga0495651_0000604
434 Ga0495651_0002436
435 Ga0495651_0006480
436 Ga0495651_0016261
437 Ga0495651_0024961
438 Ga0495651_0041307
439 Ga0495653_0032054
440 Ga0495580_0002713
441 Ga0495580_0003381
442 Ga0495580_0084438
443 Ga0495582_0000034
444 Ga0495582_0016853
445 Ga0495639_0005345
446 Ga0495662_0003213
447 Ga0495664_0010063
448 Ga0495594_0016198
449 Ga0495608_0012607
450 Ga0495608_0057628
451 Ga0495628_0000752
452 Ga0495628_0068036
453 Ga0495630_0019774
454 Ga0495630_0022354
455 Ga0495666_0022657
456 Ga0495652_0003733
457 Ga0495652_0006846
458 Ga0495652_0038168
459 Ga0495665_0007618
460 Ga0495640_0007353
461 Ga0495640_0032791
462 Ga0495587_0000181
463 Ga0495587_0000895
464 Ga0495587_0006738
465 Ga0495645_0007860
466 Ga0495645_0044595
467 Ga0495667_0001033
468 Ga0495667_0007870
469 Ga0495634_0085672
470 Ga0495635_0024576
471 Ga0495657_0058684
472 Ga0495599_0006931
473 Ga0495599_0010156
474 Ga0495623_0014355
475 Ga0495646_0026125
476 Ga0495658_0002738
477 Ga0495613_0003495
478 Ga0495613_0019989
479 Ga0495624_0004759
480 Ga0495600_0032953
481 Ga0495581_0029028
482 Ga0495604_0003263
483 Ga0495604_0004145
484 Ga0495604_0030348
485 Ga0495604_0081511
486 Ga0495674_0015533
487 Ga0495674_0016845
488 Ga0495674_0019552
489 Ga0495676_0034017
490 Ga0495680_0000804
491 Ga0495680_0003185
492 Ga0495680_0008013
493 Ga0495675_0000423
494 Ga0495684_0015364
495 Ga0495684_0022073
496 Ga0495684_0028983
497 Ga0495684_0064936
498 Ga0495593_0018033
499 Ga0495602_0000163
500 Ga0495602_0010802
501 Ga0495602_0022014
502 Ga0495602_0022341
503 Ga0495602_0081149
504 Ga0495614_0027337
505 Ga0496102_0092860
506 Ga0496115_0026399
507 Ga0501046_0155262
508 nmdc:mga09592_72005_c1
509 nmdc:mga0n895_25933_c1
510 nmdc:mga0n895_59606_c1
511 nmdc:mga08x19_1591_c1
512 nmdc:mga08x19_315_c1
513 nmdc:mga08x19_70775_c1
514 Ga0495601_0018375

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13307

Helicase_C_2

Helicase C-terminal domain

575

736

0.98

PF00270

DEAD

DEAD/DEAH box helicase

139

240

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fwr-assembly1.cif.gz_A structure of ding in complex with ssdna 0.7763 8 637
6fwr-assembly1.cif.gz_A structure of ding in complex with ssdna 0.7552 8 637
2b2n-assembly1.cif.gz_A structure of transcription-repair coupling factor 0.7544 474 538
7r76-assembly1.cif.gz_A cryo-em structure of dnmt5 in apo state 0.7418 468 639
2rld-assembly1.cif.gz_E crystal structure of a protein with unknown function from s23 ribosomal protein family (bt_0352) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a resolution 0.7374 260 367
ID Description Score Start End Superfamily
af_P76257_437_627_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.941 455 643 3.40.50.300
af_P76257_18_283_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9286 34 298 3.40.50.300
af_P76257_437_627_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9269 455 643 3.40.50.300
af_P76257_18_283_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.922 34 298 3.40.50.300
af_P9WMR5_468_655_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.912 461 649 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A381Z1H7-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9684 44 253 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016787
AF-A0A7V8NMJ0-F1-model_v4 ATP-dependent DNA helicase 0.9682 315 649 GO:0003676
GO:0003678
GO:0005524
GO:0006139
GO:0006974
GO:0016818
AF-A0A2V9JZ42-F1-model_v4 Helicase 0.9669 174 648 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016818
AF-A0A661BEN4-F1-model_v4 ATP-dependent DNA helicase 0.9649 424 648 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016818
AF-F4N686-F1-model_v4 ATP-dependent helicase C-terminal domain-containing protein 0.9636 421 647 GO:0003676
GO:0003678
GO:0005524
GO:0006281
GO:0016818

Map