F366933

General Info

Members Datasets Scaffolds Average Seq Length
256 196 512 446

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2848551377|2848554331
Length 528
Sequence ILGGGGFRVPLVYEAVATAATGLTVDEVALYDVDPARLRTIAAVIEELAAQLQQRGHGATVPRLLATTDLREAVTGADFVFSAVRVGGAEARTIDERVALGLGLLGQETIGPGGLAYALRTIPVALDIARAVAELAPDAWTINFTNPAGIVTEAMRTVLGDRVVGICDTPIGLVRRVGRLLGTDLVASERAASAGTAGEGAADGAPAAVDYVGLNHLGWLRSVTIDGVDRLPGLLADDAALEEIEEARLIGKDWVRADGALPNEYLFYYLHTTEAIARITGAATTRGEFLAKQQGDFYLAAAELGEGGNADVRGAGACADAGPDAGAGTDADAGAGAGAGAGAGAGADAGADATSCCTSPLDLWRETLHEREATYMAESRDEERREEDVAGGGYQEVAMRLMTALATGRSERMILDVGNAPAGSNAPPAQRIVPELPADLVLEVLCVVDGDGVHPQPVAPVELGRLGMMSALRASERKILEAATTGSREAAWQGFSMHPLVSSPKLGRKLLEGYEAGHPQIATLFRRG

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
40 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
41 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
43 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
58 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
67 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
70 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
71 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
72 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
73 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
74 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
75 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
76 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
77 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
82 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
83 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
87 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
88 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
91 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
92 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
93 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
101 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
102 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
103 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
104 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
105 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
106 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
107 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
142 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
149 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
150 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
151 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
152 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
153 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
154 2643221670 Streptomyces sp. Root431 Isolate Unclassified
155 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
156 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
157 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
158 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
159 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
160 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
161 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
162 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
163 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
164 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
165 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
166 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
167 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
168 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
169 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
170 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
171 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
172 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
173 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
174 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
175 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
176 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
177 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
178 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
179 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
180 2919395869 Microbacterium resistens 2980 Isolate Unclassified
181 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
182 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
183 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
184 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
185 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
186 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
187 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
188 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
189 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
190 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
191 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
192 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
193 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
194 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
195 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
196 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.86
Metatranscriptomes 0
Isolates 19.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.42
Nodule 0.78
Rhizoplane 6.64
Rhizosphere 65.62
Stem 0
Stem Tuber 0.78
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10036110 3300001979 Bacteria 1539
2 JGI25164J39214_1000800 3300002772 Bacteria 11220
3 JGI25152J39213_1000098 3300002773 Bacteria 61029
4 JGI25165J46597_1000005 3300003214 Bacteria 623702
5 rootH2_10015814 3300003320 Bacteria 3080
6 JGI25160J50197_1007816 3300003354 Bacteria 4140
7 Ga0055540_1007467 3300003792 Bacteria 4119
8 Ga0055540_1011660 3300003792 Bacteria 2814
9 Ga0068868_100118575 3300005338 Bacteria 2157
10 Ga0070668_100000398 3300005347 Bacteria 28845
11 Ga0070669_100132306 3300005353 Bacteria 1915
12 Ga0070659_100083248 3300005366 Bacteria 2557
13 Ga0070710_10000017 3300005437 Bacteria 93559
14 Ga0070700_100072263 3300005441 Bacteria 2205
15 Ga0070663_100076634 3300005455 Bacteria 2446
16 Ga0070662_100093002 3300005457 Bacteria 2268
17 Ga0068867_100099486 3300005459 Bacteria 2219
18 Ga0070685_10024752 3300005466 Bacteria 3300
19 Ga0068853_100010463 3300005539 Bacteria 7509
20 Ga0068853_100018113 3300005539 Bacteria 5824
21 Ga0068854_100158497 3300005578 Bacteria 1751
22 Ga0068866_10028810 3300005718 Bacteria 2649
23 Ga0068862_100212352 3300005844 Bacteria 1749
24 Ga0081455_10003711 3300005937 Bacteria 17483
25 Ga0081455_10007067 3300005937 Bacteria 11913
26 Ga0081538_10000767 3300005981 Bacteria 35060
27 Ga0081540_1007457 3300005983 Bacteria 7789
28 Ga0081540_1069137 3300005983 Bacteria 1642
29 Ga0070715_10024777 3300006163 Bacteria 2369
30 Ga0075431_100000052 3300006847 Bacteria 63044
31 Ga0075431_100011593 3300006847 Bacteria 8890
32 Ga0075429_100008808 3300006880 Bacteria 8775
33 Ga0068865_100147438 3300006881 Bacteria 1781
34 Ga0111539_10047224 3300009094 Bacteria 5147
35 Ga0105245_10012664 3300009098 Bacteria 7344
36 Ga0105245_10131804 3300009098 Bacteria 2345
37 Ga0105243_10007224 3300009148 Bacteria 8535
38 Ga0105246_10003831 3300011119 Bacteria 9118
39 Ga0105246_10030218 3300011119 Bacteria 3576
40 Ga0157369_10055544 3300013105 Bacteria 4274
41 Ga0157369_10076763 3300013105 Bacteria 3582
42 Ga0163162_10106748 3300013306 Bacteria 2895
43 Ga0157372_10054638 3300013307 Bacteria 4456
44 Ga0157380_10046873 3300014326 Bacteria 3397
45 Ga0207427_100024 3300025231 Bacteria 438403
46 Ga0209437_100337 3300025233 Bacteria 57371
47 Ga0209129_1000079 3300025258 Bacteria 187308
48 Ga0209233_1000001 3300025261 Bacteria 2992747
49 Ga0209025_1002178 3300025294 Bacteria 21751
50 Ga0209758_1016767 3300025297 Bacteria 3699
51 Ga0207426_1004446 3300025302 Bacteria 6836
52 Ga0209051_1000330 3300025303 Bacteria 71428
53 Ga0209051_1002054 3300025303 Bacteria 15269
54 Ga0207642_10049803 3300025899 Bacteria 1885
55 Ga0207688_10034040 3300025901 Bacteria 2820
56 Ga0207687_10024933 3300025927 Bacteria 4000
57 Ga0207709_10026226 3300025935 Bacteria 3345
58 Ga0207640_10029677 3300025981 Bacteria 3360
59 Ga0207639_10019920 3300026041 Bacteria 4794
60 Ga0207648_10088233 3300026089 Bacteria 2708
61 Ga0207675_100008989 3300026118 Bacteria 9373
62 Ga0207428_10001546 3300027907 Bacteria 24048
63 Ga0268265_10017086 3300028380 Bacteria 4999
64 Ga0307517_10039886 3300028786 Bacteria 5138
65 Ga0307515_10001340 3300028794 Bacteria 55728
66 Ga0307512_10006682 3300030522 Bacteria 11611
67 Ga0307512_10024183 3300030522 Bacteria 5411
68 Ga0316177_1064445 3300030731 Bacteria 3102
69 Ga0307513_10012502 3300031456 Bacteria 10471
70 Ga0307513_10015837 3300031456 Bacteria 9123
71 Ga0307509_10006131 3300031507 Bacteria 16321
72 Ga0307509_10074121 3300031507 Bacteria 3542
73 Ga0307509_10178156 3300031507 Bacteria 1995
74 Ga0307508_10003223 3300031616 Bacteria 16677
75 Ga0307508_10079352 3300031616 Bacteria 2863
76 Ga0307516_10016019 3300031730 Bacteria 7859
77 Ga0307516_10105515 3300031730 Bacteria 2629
78 Ga0307409_100025113 3300031995 Bacteria 4172
79 Ga0307416_100193845 3300032002 Bacteria 1920
80 Ga0307414_10071027 3300032004 Bacteria 2510
81 Ga0307507_10000976 3300033179 Bacteria 63433
82 Ga0373942_0001632 3300035207 Bacteria 5719
83 Ga0395898_0002773 3300037466 Bacteria 20139
84 Ga0451789_0162079 3300041443 Bacteria 3013
85 Ga0451793_0086182 3300041452 Bacteria 4670
86 Ga0451793_1426613 3300041452 Bacteria 2601
87 Ga0451797_0915687 3300041453 Bacteria 6465
88 Ga0451795_1053544 3300041456 Bacteria 1992
89 Ga0451802_0592556 3300041460 Bacteria 1820
90 Ga0451853_0822494 3300041512 Bacteria 9907
91 Ga0451853_2310360 3300041512 Bacteria 3424
92 Ga0450894_000018 3300042131 Bacteria 23505
93 Ga0450908_006494 3300042184 Bacteria 2219
94 Ga0466972_0016841 3300044658 Bacteria 3656
95 Ga0466965_0000723 3300044683 Bacteria 12304
96 Ga0466965_0005372 3300044683 Bacteria 5769
97 Ga0466965_0013072 3300044683 Bacteria 3913
98 Ga0466965_0015081 3300044683 Bacteria 3667
99 Ga0466965_0020586 3300044683 Bacteria 3172
100 Ga0466966_0018293 3300044684 Bacteria 4622
101 Ga0466970_0017237 3300044765 Bacteria 3730
102 Ga0466960_0008007 3300044901 Bacteria 4313
103 Ga0466959_0008497 3300045049 Bacteria 7265
104 Ga0466959_0053931 3300045049 Bacteria 2938
105 Ga0466958_0015654 3300045836 Bacteria 4351
106 Ga0466967_0039186 3300045976 Bacteria 4071
107 Ga0495606_0031947 3300046507 Bacteria 3654
108 Ga0495620_0024227 3300046515 Bacteria 2890
109 Ga0495648_0030852 3300046524 Bacteria 3537
110 Ga0495609_0054045 3300046538 Bacteria 1784
111 Ga0495645_0071105 3300046543 Bacteria 2510
112 Ga0495672_0009738 3300047320 Bacteria 6927
113 Ga0495686_0027511 3300047472 Bacteria 3711
114 Ga0496100_0004007 3300048903 Bacteria 7748
115 Ga0496101_0000051 3300048904 Bacteria 142699
116 Ga0496102_0000032 3300048905 Bacteria 214049
117 Ga0496102_0016795 3300048905 Bacteria 6401
118 Ga0496103_0000027 3300048906 Bacteria 213677
119 Ga0496103_0011337 3300048906 Bacteria 5279
120 Ga0496104_0015967 3300048907 Bacteria 6815
121 Ga0496105_0028250 3300048908 Bacteria 4588
122 Ga0496110_0056751 3300048913 Bacteria 3446
123 Ga0496114_0050308 3300048917 Bacteria 3468
124 Ga0496116_0000088 3300048919 Bacteria 213188
125 Ga0496117_0000018 3300048920 Bacteria 479613
126 Ga0496118_0000013 3300048921 Bacteria 574008
127 Ga0496119_0002218 3300048922 Bacteria 21681
128 Ga0496119_0014697 3300048922 Bacteria 6099
129 Ga0496119_0030241 3300048922 Bacteria 3656
130 Ga0496120_0000284 3300048923 Bacteria 85391
131 Ga0496121_0000095 3300048924 Bacteria 209011
132 Ga0496122_0008531 3300048925 Bacteria 11025
133 Ga0496123_0007816 3300048926 Bacteria 9954
134 Ga0501032_0003159 3300049569 Bacteria 12672
135 Ga0501033_0004179 3300049570 Bacteria 11621
136 Ga0501033_0015701 3300049570 Bacteria 5742
137 Ga0501033_0123805 3300049570 Bacteria 1875
138 Ga0501034_0016396 3300049571 Bacteria 7606
139 Ga0501034_0250024 3300049571 Bacteria 1717
140 Ga0501036_0003534 3300049572 Bacteria 12506
141 Ga0501036_0012020 3300049572 Bacteria 7176
142 Ga0501036_0018662 3300049572 Bacteria 5815
143 Ga0501037_0006478 3300049573 Bacteria 8562
144 Ga0501037_0010390 3300049573 Bacteria 6829
145 Ga0501037_0170291 3300049573 Bacteria 1548
146 Ga0501038_0007236 3300049574 Bacteria 10253
147 Ga0501038_0009860 3300049574 Bacteria 8741
148 Ga0501038_0210120 3300049574 Bacteria 1557
149 Ga0501039_0016942 3300049575 Bacteria 5585
150 Ga0501039_0019950 3300049575 Bacteria 5139
151 Ga0501039_0111920 3300049575 Bacteria 2134
152 Ga0501040_0002503 3300049576 Bacteria 11836
153 Ga0501040_0006988 3300049576 Bacteria 7314
154 Ga0501041_0006904 3300049577 Bacteria 6657
155 Ga0501041_0007900 3300049577 Bacteria 6252
156 Ga0501042_0005816 3300049578 Bacteria 7964
157 Ga0501042_0010127 3300049578 Bacteria 6306
158 Ga0501043_0016930 3300049579 Bacteria 5713
159 Ga0501043_0089189 3300049579 Bacteria 2424
160 Ga0501046_0014876 3300049580 Bacteria 6549
161 Ga0501047_0017409 3300049581 Bacteria 6882
162 Ga0501047_0022483 3300049581 Bacteria 6056
163 Ga0501047_0179118 3300049581 Bacteria 1986
164 Ga0501048_0001509 3300049582 Bacteria 17620
165 Ga0501048_0005737 3300049582 Bacteria 9433
166 Ga0501048_0048655 3300049582 Bacteria 3023
167 Ga0501067_0002153 3300049583 Bacteria 10859
168 Ga0501067_0048313 3300049583 Bacteria 2360
169 Ga0501068_0157720 3300049584 Bacteria 1429
170 Ga0501069_0004956 3300049585 Bacteria 6907
171 Ga0501070_0000268 3300049586 Bacteria 49072
172 Ga0501071_0002326 3300049587 Bacteria 11470
173 Ga0501071_0028224 3300049587 Bacteria 3953
174 Ga0501072_0054730 3300049588 Bacteria 3144
175 Ga0501075_0046938 3300049591 Bacteria 3245
176 Ga0501076_0003487 3300049592 Bacteria 11051
177 Ga0501076_0021403 3300049592 Bacteria 4960
178 Ga0501077_0003455 3300049593 Bacteria 9485
179 Ga0501077_0022641 3300049593 Bacteria 3981
180 Ga0501077_0092501 3300049593 Bacteria 1916
181 Ga0501079_0002823 3300049741 Bacteria 12665
182 Ga0501079_0003706 3300049741 Bacteria 11267
183 Ga0501079_0009663 3300049741 Bacteria 7315
184 Ga0501081_0017919 3300049743 Bacteria 4697
185 Ga0501081_0038529 3300049743 Bacteria 3266
186 Ga0501083_0006806 3300049744 Bacteria 8113
187 Ga0501035_0074752 3300049822 Bacteria 2997
188 Ga0501035_0081512 3300049822 Bacteria 2855
189 Ga0501035_0113084 3300049822 Bacteria 2378
190 Ga0501045_0013612 3300049824 Bacteria 5748
191 nmdc:mga05p37_309_c1 3300050507 Bacteria 51521
192 nmdc:mga0qj67_987_c1 3300050509 Bacteria 19625
193 nmdc:mga06r32_2255_c1 3300050510 Bacteria 17254
194 nmdc:mga06r32_271_c1 3300050510 Bacteria 43051
195 nmdc:mga08y16_13323_c1 3300050511 Bacteria 8649
196 Ga0495601_0001403 3300053077 Bacteria 13265
197 Ga0495655_0010624 3300053083 Bacteria 1823
198 Ga0500643_029461 3300053087 Bacteria 1688
199 Ga0500583_0053688 3300053092 Bacteria 1880
200 Ga0500651_0033436 3300053093 Bacteria 3243
201 Ga0500616_0040526 3300053153 Bacteria 2505
202 Ga0501084_0009276 3300054114 Bacteria 8140
203 Ga0501084_0012932 3300054114 Bacteria 6910
204 Ga0501082_0007467 3300060353 Bacteria 9432
205 Ga0501082_0009216 3300060353 Bacteria 8508
206 Ga0530510_0001337 3300061734 Bacteria 16500
207 Ga0530510_0004286 3300061734 Bacteria 9866
208 2848554331 2848551377 Bacteria 3720646
209 2515851290 2515154155 Bacteria 7985436
210 2643851356 2643221567 Bacteria 4163945
211 2643946162 2643221587 Bacteria 7586415
212 2644138054 2643221624 Bacteria 4384879
213 2644387933 2643221670 Bacteria 6497041
214 2644487699 2643221687 Bacteria 6500351
215 2645722058 2643221961 Bacteria 3919167
216 2676475782 2675903058 Bacteria 6822861
217 2676496250 2675903060 Bacteria 10051191
218 2729907428 2728369276 Bacteria 5610032
219 2729909699 2728369276 Bacteria 5610032
220 2758225356 2757320536 Bacteria 3629334
221 2793984769 2791355406 Bacteria 11364898
222 2808872832 2808606365 Bacteria 4301966
223 2810364404 2808606700 Bacteria 3482157
224 2816511254 2816332139 Bacteria 9138787
225 2827630343 2827628540 Bacteria 6858585
226 2844852141 2844849076 Bacteria 4091819
227 2852680055 2852677369 Bacteria 3768884
228 2862180112 2862178590 Bacteria 8583590
229 2862383916 2862382967 Bacteria 10317375
230 2863410115 2863404153 Bacteria 9672205
231 2870788956 2870782633 Bacteria 9624083
232 2883825419 2883821847 Bacteria 5121194
233 2884767238 2884763398 Bacteria 4091164
234 2887446151 2887443736 Bacteria 4426037
235 2899372396 2899370129 Bacteria 6781179
236 2902793756 2902792274 Bacteria 7270173
237 2902840819 2902837492 Bacteria 6697721
238 2905927951 2905926851 Bacteria 4423176
239 2918507609 2918501144 Bacteria 8668083
240 2919397386 2919395869 Bacteria 3704152
241 2919525579 2919523602 Bacteria 3788128
242 2946005553 2946003308 Bacteria 3857229
243 2990091925 2990088156 Bacteria 6657676
244 2995726807 2995726249 Bacteria 3470435
245 3003003449 3002998708 Bacteria 11715108
246 3006321905 3006321560 Bacteria 8247479
247 8008564137 8008558824 Bacteria 10610750
248 8025483111 8025478263 Bacteria 8209203
249 8047711842 8047710418 Bacteria 11023148
250 8047899178 8047893842 Bacteria 11723082
251 8048359741 8048356638 Bacteria 11044339
252 8048376140 8048369669 Bacteria 11666822
253 8048385199 8048379754 Bacteria 11877923
254 8053951096 8053945823 Bacteria 8962862
255 8056453553 8056447290 Bacteria 7680491
256 8056673329 8056667051 Bacteria 6953971
257 JGI24740J21852_10036110
258 JGI25164J39214_1000800
259 JGI25152J39213_1000098
260 JGI25165J46597_1000005
261 rootH2_10015814
262 JGI25160J50197_1007816
263 Ga0055540_1007467
264 Ga0055540_1011660
265 Ga0068868_100118575
266 Ga0070668_100000398
267 Ga0070669_100132306
268 Ga0070659_100083248
269 Ga0070710_10000017
270 Ga0070700_100072263
271 Ga0070663_100076634
272 Ga0070662_100093002
273 Ga0068867_100099486
274 Ga0070685_10024752
275 Ga0068853_100010463
276 Ga0068853_100018113
277 Ga0068854_100158497
278 Ga0068866_10028810
279 Ga0068862_100212352
280 Ga0081455_10003711
281 Ga0081455_10007067
282 Ga0081538_10000767
283 Ga0081540_1007457
284 Ga0081540_1069137
285 Ga0070715_10024777
286 Ga0075431_100000052
287 Ga0075431_100011593
288 Ga0075429_100008808
289 Ga0068865_100147438
290 Ga0111539_10047224
291 Ga0105245_10012664
292 Ga0105245_10131804
293 Ga0105243_10007224
294 Ga0105246_10003831
295 Ga0105246_10030218
296 Ga0157369_10055544
297 Ga0157369_10076763
298 Ga0163162_10106748
299 Ga0157372_10054638
300 Ga0157380_10046873
301 Ga0207427_100024
302 Ga0209437_100337
303 Ga0209129_1000079
304 Ga0209233_1000001
305 Ga0209025_1002178
306 Ga0209758_1016767
307 Ga0207426_1004446
308 Ga0209051_1000330
309 Ga0209051_1002054
310 Ga0207642_10049803
311 Ga0207688_10034040
312 Ga0207687_10024933
313 Ga0207709_10026226
314 Ga0207640_10029677
315 Ga0207639_10019920
316 Ga0207648_10088233
317 Ga0207675_100008989
318 Ga0207428_10001546
319 Ga0268265_10017086
320 Ga0307517_10039886
321 Ga0307515_10001340
322 Ga0307512_10006682
323 Ga0307512_10024183
324 Ga0316177_1064445
325 Ga0307513_10012502
326 Ga0307513_10015837
327 Ga0307509_10006131
328 Ga0307509_10074121
329 Ga0307509_10178156
330 Ga0307508_10003223
331 Ga0307508_10079352
332 Ga0307516_10016019
333 Ga0307516_10105515
334 Ga0307409_100025113
335 Ga0307416_100193845
336 Ga0307414_10071027
337 Ga0307507_10000976
338 Ga0373942_0001632
339 Ga0395898_0002773
340 Ga0451789_0162079
341 Ga0451793_0086182
342 Ga0451793_1426613
343 Ga0451797_0915687
344 Ga0451795_1053544
345 Ga0451802_0592556
346 Ga0451853_0822494
347 Ga0451853_2310360
348 Ga0450894_000018
349 Ga0450908_006494
350 Ga0466972_0016841
351 Ga0466965_0000723
352 Ga0466965_0005372
353 Ga0466965_0013072
354 Ga0466965_0015081
355 Ga0466965_0020586
356 Ga0466966_0018293
357 Ga0466970_0017237
358 Ga0466960_0008007
359 Ga0466959_0008497
360 Ga0466959_0053931
361 Ga0466958_0015654
362 Ga0466967_0039186
363 Ga0495606_0031947
364 Ga0495620_0024227
365 Ga0495648_0030852
366 Ga0495609_0054045
367 Ga0495645_0071105
368 Ga0495672_0009738
369 Ga0495686_0027511
370 Ga0496100_0004007
371 Ga0496101_0000051
372 Ga0496102_0000032
373 Ga0496102_0016795
374 Ga0496103_0000027
375 Ga0496103_0011337
376 Ga0496104_0015967
377 Ga0496105_0028250
378 Ga0496110_0056751
379 Ga0496114_0050308
380 Ga0496116_0000088
381 Ga0496117_0000018
382 Ga0496118_0000013
383 Ga0496119_0002218
384 Ga0496119_0014697
385 Ga0496119_0030241
386 Ga0496120_0000284
387 Ga0496121_0000095
388 Ga0496122_0008531
389 Ga0496123_0007816
390 Ga0501032_0003159
391 Ga0501033_0004179
392 Ga0501033_0015701
393 Ga0501033_0123805
394 Ga0501034_0016396
395 Ga0501034_0250024
396 Ga0501036_0003534
397 Ga0501036_0012020
398 Ga0501036_0018662
399 Ga0501037_0006478
400 Ga0501037_0010390
401 Ga0501037_0170291
402 Ga0501038_0007236
403 Ga0501038_0009860
404 Ga0501038_0210120
405 Ga0501039_0016942
406 Ga0501039_0019950
407 Ga0501039_0111920
408 Ga0501040_0002503
409 Ga0501040_0006988
410 Ga0501041_0006904
411 Ga0501041_0007900
412 Ga0501042_0005816
413 Ga0501042_0010127
414 Ga0501043_0016930
415 Ga0501043_0089189
416 Ga0501046_0014876
417 Ga0501047_0017409
418 Ga0501047_0022483
419 Ga0501047_0179118
420 Ga0501048_0001509
421 Ga0501048_0005737
422 Ga0501048_0048655
423 Ga0501067_0002153
424 Ga0501067_0048313
425 Ga0501068_0157720
426 Ga0501069_0004956
427 Ga0501070_0000268
428 Ga0501071_0002326
429 Ga0501071_0028224
430 Ga0501072_0054730
431 Ga0501075_0046938
432 Ga0501076_0003487
433 Ga0501076_0021403
434 Ga0501077_0003455
435 Ga0501077_0022641
436 Ga0501077_0092501
437 Ga0501079_0002823
438 Ga0501079_0003706
439 Ga0501079_0009663
440 Ga0501081_0017919
441 Ga0501081_0038529
442 Ga0501083_0006806
443 Ga0501035_0074752
444 Ga0501035_0081512
445 Ga0501035_0113084
446 Ga0501045_0013612
447 nmdc:mga05p37_309_c1
448 nmdc:mga0qj67_987_c1
449 nmdc:mga06r32_2255_c1
450 nmdc:mga06r32_271_c1
451 nmdc:mga08y16_13323_c1
452 Ga0495601_0001403
453 Ga0495655_0010624
454 Ga0500643_029461
455 Ga0500583_0053688
456 Ga0500651_0033436
457 Ga0500616_0040526
458 Ga0501084_0009276
459 Ga0501084_0012932
460 Ga0501082_0007467
461 Ga0501082_0009216
462 Ga0530510_0001337
463 Ga0530510_0004286
464 2848554331
465 2515851290
466 2643851356
467 2643946162
468 2644138054
469 2644387933
470 2644487699
471 2645722058
472 2676475782
473 2676496250
474 2729907428
475 2729909699
476 2758225356
477 2793984769
478 2808872832
479 2810364404
480 2816511254
481 2827630343
482 2844852141
483 2852680055
484 2862180112
485 2862383916
486 2863410115
487 2870788956
488 2883825419
489 2884767238
490 2887446151
491 2899372396
492 2902793756
493 2902840819
494 2905927951
495 2918507609
496 2919397386
497 2919525579
498 2946005553
499 2990091925
500 2995726807
501 3003003449
502 3006321905
503 8008564137
504 8025483111
505 8047711842
506 8047899178
507 8048359741
508 8048376140
509 8048385199
510 8053951096
511 8056453553
512 8056673329

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02056

Glyco_hydro_4

Family 4 glycosyl hydrolase

1

183

0.89

PF11975

Glyco_hydro_4C

Family 4 glycosyl hydrolase C-terminal domain

211

501

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1up6-assembly2.cif.gz_F structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.55 angstrom resolution in the tetragonal form with manganese, nad+ and glucose-6-phosphate 0.9361 1 445
1up6-assembly2.cif.gz_H structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.55 angstrom resolution in the tetragonal form with manganese, nad+ and glucose-6-phosphate 0.9342 1 445
1up4-assembly1.cif.gz_D structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.85 angstrom resolution in the monoclinic form 0.9326 1 445
1up7-assembly1.cif.gz_A structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.4 angstrom resolution in the tetragonal form with nad and glucose-6-phosphate 0.9305 1 445
1up7-assembly2.cif.gz_E structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.4 angstrom resolution in the tetragonal form with nad and glucose-6-phosphate 0.9303 1 445
ID Description Score Start End Superfamily
1s6yA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9139 1 163 3.40.50.720
1s6yA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9033 1 163 3.40.50.720
1up7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8957 1 161 3.40.50.720
af_P31450_1_210_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8921 2 207 3.40.50.720
5c3mB02 Alpha Beta;Alpha-Beta Complex;L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2;Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.8858 164 449 3.90.110.10
ID Description Score Start End GO Terms
AF-A0A060C6Q2-F1-model_v4 CAZy families GH4 protein 0.9978 1 77 GO:0004553
GO:0005975
AF-A0A7K2ZSC4-F1-model_v4 6-phospho-beta-glucosidase 0.9961 1 95 GO:0004553
GO:0005975
AF-A0A060C671-F1-model_v4 Glyco_hydro_4 0.9908 1 113 GO:0004553
GO:0005975
AF-K4J0A4-F1-model_v4 deleted 0.9877 1 450
AF-A0A6B3HWH3-F1-model_v4 6-phospho-beta-glucosidase 0.9872 1 65

Map