F366728

General Info

Members Datasets Scaffolds Average Seq Length
256 162 249 444

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0003851|Ga0466958_0003851_3858_5369
Length 503
Sequence MNAGRVNRTIGGAHGAGSAIARAAAELRSAPLTMRMGIIRGVHGLAVQASGPRARIGELCAIVPPGVAPPLDVQALLIDSPAGADATAAARKPTIAEVIGIQSSHVMLMPYGDVRGVEVGSTVVALGERSEIGVGSELLGRVIDGFGQPLDGLPPPATRASRAVHGQPINPMDRPPIDTVLETGVRVIDGLLTVGRGQRVGIFAGSGVGKSTLLGMIARHVQADVNVIALIGERGREVRDFIERQLGSDGLRRSVVVVATADQPALARIRAAHAAFAIAESFRDAGLQVVLTVDSITRLAMARREVGLSAGEPPTARGYPPSVFAELPRLCERCGTASSGGTMTALLTVLVEGDDFNEPVSDTLRAVLDGHIVLSRDIANAGRYPAVDVLKSASRLLTELTSPAERELIRESVRLLELLERNRQMVELGAYERGTNPTLDAALGVQTELDAWLRQDNGGDTRQQALDALRAILTPREREAPDAADKGRAFAIRGAASPARIVS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221556 Massilia sp. Root1485 Isolate Unclassified
3 2643221638 Duganella sp. Root336D2 Isolate Unclassified
4 2643221684 Massilia sp. Root133 Isolate Unclassified
5 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
6 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
7 2842711865 Duganella sp. R-73148 Isolate Unclassified
8 2919506607 Acinetobacter sp. 3657 Isolate Unclassified
9 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
10 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
11 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
16 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
17 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
20 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
25 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
47 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
51 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
52 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
55 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
78 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
79 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
87 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
99 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
102 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
103 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
104 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
105 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
106 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
107 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
108 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
109 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
113 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
114 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
115 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
116 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
117 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
118 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
121 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
122 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
123 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
124 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
131 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
132 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
142 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
143 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
147 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
154 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
155 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
156 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.27
Metatranscriptomes 0
Isolates 2.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.45
Nodule 0
Rhizoplane 0
Rhizosphere 74.61
Stem 0
Stem Tuber 0
Unclassified 10.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_585231 2162886007 Bacteria 4805
2 JGI25156J39149_1000315 3300002705 Bacteria 32026
3 JGI25156J39149_1000659 3300002705 Bacteria 18836
4 JGI25154J39366_1003472 3300002738 Bacteria 3287
5 JGI25157J39369_1000073 3300002741 Bacteria 88360
6 rootH1_10012474 3300003316 Bacteria 43319
7 rootL2_10006781 3300003322 Bacteria 42718
8 rootH1_10021844 3300003323 Bacteria 42529
9 rootH1_10056624 3300003323 Bacteria 4143
10 Ga0055539_1002179 3300003752 Bacteria 3127
11 Ga0055526_1000253 3300003771 Bacteria 45420
12 Ga0055537_1000148 3300003773 Bacteria 52583
13 Ga0055524_1000057 3300003775 Bacteria 139566
14 Ga0055534_1001029 3300003784 Bacteria 12191
15 Ga0055528_1000196 3300003790 Bacteria 51284
16 Ga0055531_10000485 3300003794 Bacteria 36640
17 Ga0055531_10024351 3300003794 Bacteria 2237
18 Ga0055541_1001510 3300003841 Bacteria 5011
19 Ga0065165_1004127 3300005262 Bacteria 9335
20 Ga0065165_1020128 3300005262 Bacteria 2360
21 Ga0065704_10000754 3300005289 Bacteria 12893
22 Ga0070682_100012545 3300005337 Bacteria 4860
23 Ga0070673_100011587 3300005364 Bacteria 6023
24 Ga0070665_100000436 3300005548 Bacteria 60833
25 Ga0070665_100016085 3300005548 Bacteria 7507
26 Ga0068855_100001995 3300005563 Bacteria 25350
27 Ga0068855_100313213 3300005563 Bacteria 1736
28 Ga0068857_100000099 3300005577 Bacteria 50563
29 Ga0068854_100003808 3300005578 Bacteria 9436
30 Ga0068856_100002157 3300005614 Bacteria 20388
31 Ga0068862_100097431 3300005844 Bacteria 2568
32 Ga0105251_10003657 3300009011 Bacteria 11028
33 Ga0105240_10057610 3300009093 Bacteria 4853
34 Ga0114129_10151622 3300009147 Bacteria 3172
35 Ga0114129_10201549 3300009147 Bacteria 2695
36 Ga0105237_10062649 3300009545 Bacteria 3719
37 Ga0105238_10002295 3300009551 Bacteria 19266
38 Ga0105238_10065423 3300009551 Bacteria 3636
39 Ga0105249_10016194 3300009553 Bacteria 6612
40 Ga0105239_10050005 3300010375 Bacteria 4584
41 Ga0157371_10001426 3300013102 Bacteria 24816
42 Ga0157374_10000708 3300013296 Bacteria 29260
43 Ga0163163_10196770 3300014325 Unclassified 2064
44 Ga0157377_10021031 3300014745 Bacteria 3426
45 Ga0183362_10002 3300015683 Bacteria 1432711
46 Ga0163161_10000607 3300017792 Bacteria 28643
47 Ga0213872_10000292 3300021361 Bacteria 42585
48 Ga0213872_10003128 3300021361 Bacteria 9303
49 Ga0213872_10009990 3300021361 Bacteria 4530
50 Ga0209784_100130 3300025224 Bacteria 75773
51 Ga0209566_100581 3300025225 Bacteria 23574
52 Ga0209674_100468 3300025226 Bacteria 17812
53 Ga0209646_1000067 3300025246 Bacteria 241595
54 Ga0209026_1000033 3300025250 Bacteria 318512
55 Ga0209677_100087 3300025253 Bacteria 109892
56 Ga0209759_1000024 3300025256 Bacteria 318512
57 Ga0209129_1005607 3300025258 Bacteria 4367
58 Ga0209565_1000028 3300025263 Bacteria 348536
59 Ga0209673_1000035 3300025273 Bacteria 328411
60 Ga0209673_1011235 3300025273 Bacteria 3705
61 Ga0209673_1016021 3300025273 Bacteria 2819
62 Ga0209675_1000949 3300025291 Bacteria 18429
63 Ga0209675_1016411 3300025291 Bacteria 2158
64 Ga0209025_1002610 3300025294 Bacteria 18554
65 Ga0209564_1000761 3300025295 Bacteria 45472
66 Ga0209050_1000360 3300025298 Bacteria 87458
67 Ga0209050_1004984 3300025298 Bacteria 8641
68 Ga0209050_1006694 3300025298 Bacteria 6742
69 Ga0209256_1000003 3300025299 Bacteria 1661127
70 Ga0209051_1001679 3300025303 Bacteria 17837
71 Ga0209257_1001108 3300025304 Bacteria 35000
72 Ga0209257_1001858 3300025304 Bacteria 22913
73 Ga0209257_1006772 3300025304 Bacteria 7219
74 Ga0209257_1007800 3300025304 Bacteria 6344
75 Ga0207713_1001406 3300025735 Bacteria 19421
76 Ga0207695_10039214 3300025913 Bacteria 5092
77 Ga0207694_10063859 3300025924 Bacteria 2869
78 Ga0207667_10005126 3300025949 Bacteria 16005
79 Ga0207667_10095086 3300025949 Bacteria 3076
80 Ga0207651_10006769 3300025960 Bacteria 6041
81 Ga0207712_10148661 3300025961 Bacteria 1807
82 Ga0207640_10010646 3300025981 Bacteria 5187
83 Ga0207702_10000145 3300026078 Bacteria 83991
84 Ga0207674_10000250 3300026116 Bacteria 67021
85 Ga0268266_10001005 3300028379 Bacteria 35552
86 Ga0268266_10010557 3300028379 Bacteria 8062
87 Ga0268265_10090412 3300028380 Bacteria 2445
88 Ga0268265_10116631 3300028380 Bacteria 2191
89 Ga0307513_10009583 3300031456 Bacteria 12236
90 Ga0307516_10000045 3300031730 Bacteria 132787
91 Ga0307516_10256939 3300031730 Bacteria 1439
92 Ga0373939_0000158 3300035114 Bacteria 18920
93 Ga0373960_0003105 3300035121 Bacteria 3751
94 Ga0373931_0000175 3300035691 Bacteria 28140
95 Ga0395899_0005463 3300037312 Bacteria 9857
96 Ga0395899_0007089 3300037312 Bacteria 8675
97 Ga0395899_0074823 3300037312 Bacteria 2474
98 Ga0395900_0000099 3300037418 Bacteria 154573
99 Ga0395900_0002364 3300037418 Bacteria 20865
100 Ga0395900_0005144 3300037418 Bacteria 13737
101 Ga0395900_0010144 3300037418 Bacteria 9634
102 Ga0395900_0067504 3300037418 Bacteria 3674
103 Ga0395900_0068984 3300037418 Bacteria 3633
104 Ga0395898_0022360 3300037466 Bacteria 6404
105 Ga0395898_0048384 3300037466 Bacteria 4170
106 Ga0395898_0065436 3300037466 Bacteria 3524
107 Ga0395898_0111636 3300037466 Bacteria 2620
108 Ga0395905_0002911 3300037471 Bacteria 18676
109 Ga0395905_0005820 3300037471 Bacteria 12530
110 Ga0395905_0036949 3300037471 Bacteria 4588
111 Ga0395905_0096546 3300037471 Bacteria 2775
112 Ga0395905_0170331 3300037471 Bacteria 2045
113 Ga0395901_0000325 3300038443 Bacteria 58876
114 Ga0395901_0003410 3300038443 Bacteria 16011
115 Ga0395901_0021262 3300038443 Bacteria 6646
116 Ga0395901_0058024 3300038443 Bacteria 4026
117 Ga0395901_0091786 3300038443 Bacteria 3179
118 Ga0395901_0092336 3300038443 Bacteria 3169
119 Ga0395901_0096929 3300038443 Bacteria 3091
120 Ga0436361_0709841 3300039447 Bacteria 56493
121 Ga0436361_1068052 3300039447 Bacteria 2737
122 Ga0436361_1172855 3300039447 Bacteria 39928
123 Ga0439448_0000005 3300042005 Bacteria 37023
124 Ga0439459_0006875 3300042438 Bacteria 1908
125 Ga0451577_0006686 3300042876 Bacteria 11445
126 Ga0451577_0096529 3300042876 Bacteria 2639
127 Ga0466969_0003026 3300044656 Bacteria 8958
128 Ga0466969_0021121 3300044656 Bacteria 3368
129 Ga0466965_0000027 3300044683 Bacteria 55810
130 Ga0466965_0006024 3300044683 Bacteria 5478
131 Ga0466965_0006168 3300044683 Bacteria 5423
132 Ga0466966_0000177 3300044684 Bacteria 42049
133 Ga0466966_0002399 3300044684 Bacteria 12231
134 Ga0466966_0007161 3300044684 Bacteria 7392
135 Ga0466961_0000112 3300044693 Bacteria 54015
136 Ga0466961_0036404 3300044693 Bacteria 3159
137 Ga0466961_0054075 3300044693 Bacteria 2561
138 Ga0466964_0000057 3300044706 Bacteria 23832
139 Ga0466970_0073782 3300044765 Bacteria 1836
140 Ga0466959_0005222 3300045049 Bacteria 8862
141 Ga0466959_0010243 3300045049 Bacteria 6693
142 Ga0466959_0022532 3300045049 Bacteria 4658
143 Ga0451576_0011570 3300045051 Bacteria 10009
144 Ga0466958_0003851 3300045836 Bacteria 7847
145 Ga0495617_000001 3300046452 Bacteria 877032
146 Ga0495627_000053 3300046453 Bacteria 152092
147 Ga0495627_000585 3300046453 Bacteria 29133
148 Ga0495627_011849 3300046453 Bacteria 3113
149 Ga0495592_0000195 3300046454 Bacteria 51662
150 Ga0495590_0000024 3300046457 Bacteria 196121
151 Ga0495591_000063 3300046458 Bacteria 124221
152 Ga0495650_0001645 3300046471 Bacteria 20723
153 Ga0495605_0000004 3300046474 Bacteria 395282
154 Ga0495605_0001340 3300046474 Bacteria 16297
155 Ga0495584_0000001 3300046491 Bacteria 649329
156 Ga0495584_0006165 3300046491 Bacteria 6303
157 Ga0495585_0000479 3300046492 Bacteria 38105
158 Ga0495585_0004970 3300046492 Bacteria 8502
159 Ga0495594_0001815 3300046499 Bacteria 11102
160 Ga0495596_0004451 3300046500 Bacteria 6817
161 Ga0495607_0000699 3300046501 Bacteria 32297
162 Ga0495607_0015717 3300046501 Bacteria 4898
163 Ga0495583_0000100 3300046506 Bacteria 145745
164 Ga0495583_0000360 3300046506 Bacteria 71333
165 Ga0495606_0000224 3300046507 Bacteria 100442
166 Ga0495606_0001654 3300046507 Bacteria 28984
167 Ga0495606_0051337 3300046507 Bacteria 2690
168 Ga0495610_0000109 3300046512 Bacteria 96522
169 Ga0495610_0003385 3300046512 Bacteria 12467
170 Ga0495616_0023953 3300046513 Bacteria 3280
171 Ga0495631_0001263 3300046518 Bacteria 15623
172 Ga0495631_0002149 3300046518 Bacteria 11387
173 Ga0495632_0000457 3300046519 Bacteria 38909
174 Ga0495632_0035721 3300046519 Bacteria 2534
175 Ga0495637_0000453 3300046520 Bacteria 29880
176 Ga0495643_0001370 3300046522 Bacteria 22794
177 Ga0495644_0001126 3300046523 Bacteria 10975
178 Ga0495644_0010921 3300046523 Bacteria 3500
179 Ga0495648_0000022 3300046524 Bacteria 242791
180 Ga0495648_0000465 3300046524 Bacteria 43551
181 Ga0495648_0077780 3300046524 Bacteria 1900
182 Ga0495663_0000061 3300046525 Bacteria 50786
183 Ga0495642_0000001 3300046528 Bacteria 389656
184 Ga0495642_0001199 3300046528 Bacteria 11937
185 Ga0495609_0000442 3300046538 Bacteria 34282
186 Ga0495609_0003137 3300046538 Bacteria 9646
187 Ga0495633_0000050 3300046558 Bacteria 155466
188 Ga0495633_0000228 3300046558 Bacteria 69559
189 Ga0495633_0002116 3300046558 Bacteria 14258
190 Ga0495633_0007676 3300046558 Bacteria 6175
191 Ga0495633_0091960 3300046558 Bacteria 1410
192 Ga0495656_0034456 3300046615 Bacteria 2073
193 Ga0495668_0000036 3300046616 Bacteria 235057
194 Ga0495668_0000125 3300046616 Bacteria 114514
195 Ga0495611_0000511 3300046648 Bacteria 23052
196 Ga0495625_0000121 3300046660 Bacteria 121186
197 Ga0495625_0000623 3300046660 Bacteria 51222
198 Ga0495625_0008683 3300046660 Bacteria 8632
199 Ga0495625_0010500 3300046660 Bacteria 7654
200 Ga0495661_0003295 3300046665 Bacteria 11979
201 Ga0495661_0080806 3300046665 Bacteria 1875
202 Ga0495588_0027482 3300046674 Bacteria 2843
203 Ga0495646_0019107 3300046680 Bacteria 4339
204 Ga0495669_0002340 3300046684 Bacteria 7765
205 Ga0495669_0012643 3300046684 Bacteria 3594
206 Ga0495670_0021621 3300046691 Bacteria 3174
207 Ga0495671_0000197 3300046692 Bacteria 52984
208 Ga0495671_0036476 3300046692 Bacteria 2490
209 Ga0495649_0021994 3300046694 Bacteria 3571
210 Ga0495589_0003660 3300046794 Bacteria 8307
211 Ga0495589_0006817 3300046794 Bacteria 6010
212 Ga0495660_0001346 3300046810 Bacteria 16902
213 Ga0495660_0048378 3300046810 Bacteria 2325
214 Ga0495672_0000538 3300047320 Bacteria 42947
215 Ga0495672_0001182 3300047320 Bacteria 26471
216 Ga0495676_0085286 3300047321 Bacteria 2380
217 Ga0495683_0000078 3300047323 Bacteria 97119
218 Ga0495687_000569 3300047443 Bacteria 43551
219 Ga0495677_0000112 3300047445 Bacteria 39716
220 Ga0495677_0005529 3300047445 Bacteria 4787
221 Ga0495677_0027786 3300047445 Bacteria 2053
222 Ga0495679_000451 3300047446 Bacteria 30271
223 Ga0495681_0017394 3300047470 Bacteria 3992
224 Ga0495681_0020136 3300047470 Bacteria 3624
225 Ga0495681_0044686 3300047470 Bacteria 2126
226 Ga0495681_0046506 3300047470 Bacteria 2069
227 Ga0495686_0004263 3300047472 Bacteria 11856
228 Ga0495686_0024594 3300047472 Bacteria 3955
229 Ga0495602_0024331 3300048088 Bacteria 5877
230 Ga0495615_0023181 3300048090 Bacteria 1420
231 Ga0495626_0001992 3300048091 Bacteria 15071
232 Ga0496117_0004447 3300048920 Bacteria 15458
233 Ga0496121_0000137 3300048924 Bacteria 164043
234 Ga0496121_0005523 3300048924 Bacteria 16156
235 Ga0496123_0008840 3300048926 Bacteria 9178
236 Ga0496124_0000964 3300048927 Bacteria 45827
237 Ga0496125_0017238 3300048928 Bacteria 6900
238 Ga0496125_0089722 3300048928 Bacteria 2311
239 Ga0495678_000058 3300049459 Bacteria 145011
240 Ga0495678_000193 3300049459 Bacteria 71591
241 Ga0495682_0002249 3300049460 Bacteria 9286
242 Ga0501235_013312 3300049669 Bacteria 1811
243 Ga0501229_000323 3300049706 Bacteria 5444
244 Ga0501044_0342981 3300049823 Bacteria 1415
245 nmdc:mga0yw44_47372_c1 3300050492 Bacteria 2587
246 nmdc:mga06z11_73064_c1 3300050494 Bacteria 1820
247 Ga0500578_0000040 3300053086 Bacteria 133601
248 Ga0500616_0000042 3300053153 Bacteria 351293
249 Ga0466962_0022796 3300061719 Bacteria 3009

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031730 Ga0307516_10000045 Ga0307516_1000004511 398
2 3300044765 Ga0466970_0073782 Ga0466970_0073782_21_1238 398
3 3300046558 Ga0495633_0007676 Ga0495633_0007676_685_1995 400
4 3300046519 Ga0495632_0035721 Ga0495632_0035721_333_1700 409
5 3300038443 Ga0395901_0003410 Ga0395901_0003410_13526_14962 410
6 3300046491 Ga0495584_0006165 Ga0495584_0006165_2812_4122 410
7 3300005548 Ga0070665_100016085 Ga0070665_1000160859 413
8 3300009093 Ga0105240_10057610 Ga0105240_100576104 413
9 3300009551 Ga0105238_10065423 Ga0105238_100654233 413
10 3300009553 Ga0105249_10016194 Ga0105249_100161944 413
11 3300025913 Ga0207695_10039214 Ga0207695_100392144 413
12 3300025924 Ga0207694_10063859 Ga0207694_100638591 413
13 3300025961 Ga0207712_10148661 Ga0207712_101486612 413
14 3300028379 Ga0268266_10010557 Ga0268266_1001055710 413
15 3300028380 Ga0268265_10116631 Ga0268265_101166312 413
16 3300044656 Ga0466969_0003026 Ga0466969_0003026_2273_3715 417
17 3300053086 Ga0500578_0000040 Ga0500578_0000040_23433_24839 417
18 3300031456 Ga0307513_10009583 Ga0307513_1000958315 419
19 3300046458 Ga0495591_000063 Ga0495591_000063_28876_30186 419
20 3300046474 Ga0495605_0001340 Ga0495605_0001340_13558_14868 419
21 3300046492 Ga0495585_0004970 Ga0495585_0004970_5787_7097 419
22 3300046501 Ga0495607_0000699 Ga0495607_0000699_6781_8091 419
23 3300046506 Ga0495583_0000360 Ga0495583_0000360_43152_44462 419
24 3300046512 Ga0495610_0000109 Ga0495610_0000109_22486_23796 419
25 3300046519 Ga0495632_0000457 Ga0495632_0000457_15986_17296 419
26 3300046520 Ga0495637_0000453 Ga0495637_0000453_15680_16990 419
27 3300046558 Ga0495633_0002116 Ga0495633_0002116_5107_6417 419
28 3300046660 Ga0495625_0008683 Ga0495625_0008683_4127_5494 419
29 3300046684 Ga0495669_0012643 Ga0495669_0012643_1184_2494 419
30 3300046794 Ga0495589_0003660 Ga0495589_0003660_925_2235 419
31 3300047320 Ga0495672_0000538 Ga0495672_0000538_25651_26961 419
32 3300047323 Ga0495683_0000078 Ga0495683_0000078_94641_95951 419
33 3300047446 Ga0495679_000451 Ga0495679_000451_13073_14383 419
34 3300047470 Ga0495681_0020136 Ga0495681_0020136_1710_3020 419
35 3300005262 Ga0065165_1020128 Ga0065165_10201282 420
36 3300025273 Ga0209673_1016021 Ga0209673_10160213 420
37 3300046694 Ga0495649_0021994 Ga0495649_0021994_1226_2533 421
38 3300047321 Ga0495676_0085286 Ga0495676_0085286_419_1921 421
39 3300049823 Ga0501044_0342981 Ga0501044_0342981_23_1303 423
40 3300046665 Ga0495661_0003295 Ga0495661_0003295_5777_7120 424
41 3300046452 Ga0495617_000001 Ga0495617_000001_511278_512621 425
42 3300046453 Ga0495627_000053 Ga0495627_000053_11862_13205 425
43 3300046457 Ga0495590_0000024 Ga0495590_0000024_112426_113736 425
44 3300046474 Ga0495605_0000004 Ga0495605_0000004_161150_162493 425
45 3300046501 Ga0495607_0015717 Ga0495607_0015717_2114_3457 425
46 3300046513 Ga0495616_0023953 Ga0495616_0023953_1093_2436 425
47 3300046518 Ga0495631_0001263 Ga0495631_0001263_1423_2733 425
48 3300046523 Ga0495644_0001126 Ga0495644_0001126_8650_9960 425
49 3300046524 Ga0495648_0000022 Ga0495648_0000022_143503_144846 425
50 3300046528 Ga0495642_0000001 Ga0495642_0000001_252050_253393 425
51 3300046538 Ga0495609_0003137 Ga0495609_0003137_1486_2829 425
52 3300046558 Ga0495633_0091960 Ga0495633_0091960_55_1398 425
53 3300046615 Ga0495656_0034456 Ga0495656_0034456_613_1956 425
54 3300046616 Ga0495668_0000125 Ga0495668_0000125_21395_22738 425
55 3300046692 Ga0495671_0000197 Ga0495671_0000197_22409_23752 425
56 3300046794 Ga0495589_0006817 Ga0495589_0006817_1427_2770 425
57 3300046810 Ga0495660_0001346 Ga0495660_0001346_14188_15498 425
58 3300047445 Ga0495677_0000112 Ga0495677_0000112_22539_23849 425
59 3300047445 Ga0495677_0005529 Ga0495677_0005529_2540_3883 425
60 3300047470 Ga0495681_0046506 Ga0495681_0046506_583_1926 425
61 3300047472 Ga0495686_0004263 Ga0495686_0004263_8373_9683 425
62 3300047472 Ga0495686_0024594 Ga0495686_0024594_833_2176 425
63 3300048091 Ga0495626_0001992 Ga0495626_0001992_871_2181 425
64 3300049459 Ga0495678_000058 Ga0495678_000058_70803_72113 425
65 3300049460 Ga0495682_0002249 Ga0495682_0002249_6808_8118 425
66 iso_pu_bacteria 2643221638 2644212612 428
67 3300002705 JGI25156J39149_1000315 JGI25156J39149_10003153 429
68 3300002705 JGI25156J39149_1000659 JGI25156J39149_100065918 429
69 3300002738 JGI25154J39366_1003472 JGI25154J39366_10034722 429
70 3300002741 JGI25157J39369_1000073 JGI25157J39369_10000732 429
71 3300003752 Ga0055539_1002179 Ga0055539_10021793 429
72 3300005563 Ga0068855_100001995 Ga0068855_10000199517 429
73 3300005577 Ga0068857_100000099 Ga0068857_10000009911 429
74 3300005578 Ga0068854_100003808 Ga0068854_1000038087 429
75 3300005614 Ga0068856_100002157 Ga0068856_1000021579 429
76 3300009545 Ga0105237_10062649 Ga0105237_100626493 429
77 3300009551 Ga0105238_10002295 Ga0105238_100022952 429
78 3300010375 Ga0105239_10050005 Ga0105239_100500054 429
79 3300025246 Ga0209646_1000067 Ga0209646_1000067181 429
80 3300025250 Ga0209026_1000033 Ga0209026_100003349 429
81 3300025253 Ga0209677_100087 Ga0209677_10008732 429
82 3300025256 Ga0209759_1000024 Ga0209759_100002449 429
83 3300025949 Ga0207667_10005126 Ga0207667_100051268 429
84 3300025981 Ga0207640_10010646 Ga0207640_100106462 429
85 3300026078 Ga0207702_10000145 Ga0207702_100001451 429
86 3300026116 Ga0207674_10000250 Ga0207674_1000025029 429
87 3300031730 Ga0307516_10256939 Ga0307516_102569391 429
88 iso_pu_bacteria 2643221556 2643802893 429
89 iso_pu_bacteria 2643221684 2644472402 429
90 iso_pu_bacteria 2842711865 2842717462 430
91 3300046454 Ga0495592_0000195 Ga0495592_0000195_17256_18713 432
92 3300046507 Ga0495606_0001654 Ga0495606_0001654_8710_10020 432
93 3300046680 Ga0495646_0019107 Ga0495646_0019107_1951_3408 432
94 3300003794 Ga0055531_10024351 Ga0055531_100243512 433
95 3300003841 Ga0055541_1001510 Ga0055541_10015105 433
96 3300025298 Ga0209050_1000360 Ga0209050_100036084 433
97 3300025304 Ga0209257_1001858 Ga0209257_100185814 433
98 3300037312 Ga0395899_0005463 Ga0395899_0005463_4578_5903 433
99 3300037312 Ga0395899_0007089 Ga0395899_0007089_4013_5326 433
100 3300037312 Ga0395899_0074823 Ga0395899_0074823_438_1745 433
101 3300037418 Ga0395900_0000099 Ga0395900_0000099_51200_52711 433
102 3300037418 Ga0395900_0005144 Ga0395900_0005144_2385_3710 433
103 3300037418 Ga0395900_0010144 Ga0395900_0010144_4775_6082 433
104 3300037418 Ga0395900_0067504 Ga0395900_0067504_299_1609 433
105 3300037466 Ga0395898_0022360 Ga0395898_0022360_3853_5178 433
106 3300037466 Ga0395898_0111636 Ga0395898_0111636_401_1708 433
107 3300037471 Ga0395905_0002911 Ga0395905_0002911_13506_14843 433
108 3300037471 Ga0395905_0005820 Ga0395905_0005820_8659_9996 433
109 3300038443 Ga0395901_0000325 Ga0395901_0000325_41968_43281 433
110 3300038443 Ga0395901_0058024 Ga0395901_0058024_129_1466 433
111 3300038443 Ga0395901_0096929 Ga0395901_0096929_1279_2586 433
112 3300044683 Ga0466965_0000027 Ga0466965_0000027_16483_17793 433
113 3300044684 Ga0466966_0000177 Ga0466966_0000177_38942_40252 433
114 3300044693 Ga0466961_0036404 Ga0466961_0036404_1114_2424 433
115 3300044706 Ga0466964_0000057 Ga0466964_0000057_9552_10862 433
116 3300045049 Ga0466959_0005222 Ga0466959_0005222_4952_6262 433
117 3300045049 Ga0466959_0022532 Ga0466959_0022532_1646_2956 433
118 3300046453 Ga0495627_011849 Ga0495627_011849_1069_2376 433
119 3300046471 Ga0495650_0001645 Ga0495650_0001645_13806_15116 433
120 3300046492 Ga0495585_0000479 Ga0495585_0000479_33185_34492 433
121 3300046499 Ga0495594_0001815 Ga0495594_0001815_8753_10060 433
122 3300046500 Ga0495596_0004451 Ga0495596_0004451_4995_6302 433
123 3300046506 Ga0495583_0000100 Ga0495583_0000100_11973_13283 433
124 3300046507 Ga0495606_0000224 Ga0495606_0000224_21370_22683 433
125 3300046512 Ga0495610_0003385 Ga0495610_0003385_5774_7081 433
126 3300046518 Ga0495631_0002149 Ga0495631_0002149_3613_4920 433
127 3300046523 Ga0495644_0010921 Ga0495644_0010921_843_2150 433
128 3300046524 Ga0495648_0000465 Ga0495648_0000465_13115_14422 433
129 3300046524 Ga0495648_0077780 Ga0495648_0077780_133_1440 433
130 3300046528 Ga0495642_0001199 Ga0495642_0001199_1123_2433 433
131 3300046538 Ga0495609_0000442 Ga0495609_0000442_29537_30847 433
132 3300046558 Ga0495633_0000050 Ga0495633_0000050_56462_57772 433
133 3300046558 Ga0495633_0000228 Ga0495633_0000228_29969_31279 433
134 3300046648 Ga0495611_0000511 Ga0495611_0000511_14762_16069 433
135 3300046660 Ga0495625_0000121 Ga0495625_0000121_71853_73163 433
136 3300046660 Ga0495625_0000623 Ga0495625_0000623_34803_36113 433
137 3300046660 Ga0495625_0010500 Ga0495625_0010500_418_1725 433
138 3300046665 Ga0495661_0080806 Ga0495661_0080806_70_1377 433
139 3300046684 Ga0495669_0002340 Ga0495669_0002340_2817_4124 433
140 3300046692 Ga0495671_0036476 Ga0495671_0036476_254_1561 433
141 3300046810 Ga0495660_0048378 Ga0495660_0048378_421_1728 433
142 3300047320 Ga0495672_0001182 Ga0495672_0001182_24058_25365 433
143 3300047443 Ga0495687_000569 Ga0495687_000569_24820_26130 433
144 3300047445 Ga0495677_0027786 Ga0495677_0027786_247_1554 433
145 3300047470 Ga0495681_0017394 Ga0495681_0017394_1971_3278 433
146 3300048920 Ga0496117_0004447 Ga0496117_0004447_13739_15076 433
147 3300048924 Ga0496121_0000137 Ga0496121_0000137_36402_37739 433
148 3300048926 Ga0496123_0008840 Ga0496123_0008840_3698_5035 433
149 3300048927 Ga0496124_0000964 Ga0496124_0000964_14416_15753 433
150 3300048928 Ga0496125_0017238 Ga0496125_0017238_5103_6440 433
151 3300048928 Ga0496125_0089722 Ga0496125_0089722_421_1758 433
152 3300049459 Ga0495678_000193 Ga0495678_000193_33574_34884 433
153 iso_pu_bacteria 2808606395 2809034037 433
154 3300015683 Ga0183362_10002 Ga0183362_10002408 434
155 3300025949 Ga0207667_10095086 Ga0207667_100950862 434
156 3300042005 Ga0439448_0000005 Ga0439448_0000005_21051_22562 434
157 3300042876 Ga0451577_0006686 Ga0451577_0006686_8773_10110 434
158 3300045051 Ga0451576_0011570 Ga0451576_0011570_5857_7194 434
159 3300048090 Ga0495615_0023181 Ga0495615_0023181_87_1406 434
160 3300044683 Ga0466965_0006024 Ga0466965_0006024_1452_2765 435
161 3300003323 rootH1_10056624 rootH1_100566245 436
162 3300014745 Ga0157377_10021031 Ga0157377_100210312 436
163 3300037471 Ga0395905_0170331 Ga0395905_0170331_585_1907 436
164 3300038443 Ga0395901_0092336 Ga0395901_0092336_640_1968 436
165 3300044693 Ga0466961_0000112 Ga0466961_0000112_18472_19914 436
166 3300053153 Ga0500616_0000042 Ga0500616_0000042_261490_262809 436
167 3300003316 rootH1_10012474 rootH1_1001247421 437
168 3300003322 rootL2_10006781 rootL2_1000678121 437
169 3300005337 Ga0070682_100012545 Ga0070682_1000125453 437
170 3300005364 Ga0070673_100011587 Ga0070673_1000115876 437
171 3300025960 Ga0207651_10006769 Ga0207651_100067694 437
172 3300035114 Ga0373939_0000158 Ga0373939_0000158_2309_3709 437
173 3300035121 Ga0373960_0003105 Ga0373960_0003105_1998_3398 437
174 3300035691 Ga0373931_0000175 Ga0373931_0000175_1528_2928 437
175 3300048924 Ga0496121_0005523 Ga0496121_0005523_5695_7047 437
176 3300049669 Ga0501235_013312 Ga0501235_013312_419_1732 437
177 3300049706 Ga0501229_000323 Ga0501229_000323_994_2307 437
178 3300003771 Ga0055526_1000253 Ga0055526_100025316 438
179 3300003773 Ga0055537_1000148 Ga0055537_100014831 438
180 3300003775 Ga0055524_1000057 Ga0055524_100005779 438
181 3300003784 Ga0055534_1001029 Ga0055534_10010293 438
182 3300003790 Ga0055528_1000196 Ga0055528_100019616 438
183 3300009147 Ga0114129_10151622 Ga0114129_101516223 438
184 3300009147 Ga0114129_10201549 Ga0114129_102015493 438
185 3300025263 Ga0209565_1000028 Ga0209565_1000028171 438
186 3300025273 Ga0209673_1000035 Ga0209673_1000035164 438
187 3300025291 Ga0209675_1000949 Ga0209675_10009497 438
188 3300025295 Ga0209564_1000761 Ga0209564_100076116 438
189 3300025299 Ga0209256_1000003 Ga0209256_10000031181 438
190 3300046491 Ga0495584_0000001 Ga0495584_0000001_631192_632529 438
191 3300046507 Ga0495606_0051337 Ga0495606_0051337_967_2304 438
192 3300005563 Ga0068855_100313213 Ga0068855_1003132132 439
193 3300037418 Ga0395900_0002364 Ga0395900_0002364_15795_17120 439
194 3300037418 Ga0395900_0068984 Ga0395900_0068984_894_2219 439
195 3300037466 Ga0395898_0048384 Ga0395898_0048384_1393_2718 439
196 3300037466 Ga0395898_0065436 Ga0395898_0065436_1358_2683 439
197 3300037471 Ga0395905_0096546 Ga0395905_0096546_1323_2648 439
198 3300038443 Ga0395901_0091786 Ga0395901_0091786_1725_3053 439
199 3300044683 Ga0466965_0006168 Ga0466965_0006168_189_1517 439
200 3300046616 Ga0495668_0000036 Ga0495668_0000036_89573_90898 439
201 3300046674 Ga0495588_0027482 Ga0495588_0027482_890_2224 439
202 3300005262 Ga0065165_1004127 Ga0065165_10041273 440
203 3300021361 Ga0213872_10000292 Ga0213872_1000029216 440
204 3300021361 Ga0213872_10003128 Ga0213872_1000312811 440
205 3300025224 Ga0209784_100130 Ga0209784_10013042 440
206 3300025225 Ga0209566_100581 Ga0209566_1005812 440
207 3300025226 Ga0209674_100468 Ga0209674_10046814 440
208 3300025258 Ga0209129_1005607 Ga0209129_10056072 440
209 3300025291 Ga0209675_1016411 Ga0209675_10164112 440
210 3300025294 Ga0209025_1002610 Ga0209025_100261016 440
211 3300025298 Ga0209050_1006694 Ga0209050_10066943 440
212 3300025304 Ga0209257_1006772 Ga0209257_10067729 440
213 3300025304 Ga0209257_1007800 Ga0209257_10078008 440
214 3300037471 Ga0395905_0036949 Ga0395905_0036949_2350_3684 440
215 3300038443 Ga0395901_0021262 Ga0395901_0021262_5275_6600 440
216 3300039447 Ga0436361_0709841 Ga0436361_0709841_15831_17168 440
217 3300039447 Ga0436361_1172855 Ga0436361_1172855_28573_29910 440
218 3300042876 Ga0451577_0096529 Ga0451577_0096529_1153_2475 440
219 3300050492 nmdc:mga0yw44_47372_c1 nmdc:mga0yw44_47372_c1_815_2188 440
220 3300050494 nmdc:mga06z11_73064_c1 nmdc:mga06z11_73064_c1_12_1385 440
221 3300021361 Ga0213872_10009990 Ga0213872_100099903 441
222 3300039447 Ga0436361_1068052 Ga0436361_1068052_139_1476 441
223 3300044684 Ga0466966_0007161 Ga0466966_0007161_5504_6832 441
224 3300045836 Ga0466958_0003851 Ga0466958_0003851_3858_5369 441
225 3300046691 Ga0495670_0021621 Ga0495670_0021621_1326_2678 441
226 3300061719 Ga0466962_0022796 Ga0466962_0022796_505_1833 441
227 3300003323 rootH1_10021844 rootH1_1002184423 442
228 3300003794 Ga0055531_10000485 Ga0055531_1000048514 442
229 3300005844 Ga0068862_100097431 Ga0068862_1000974312 442
230 3300025273 Ga0209673_1011235 Ga0209673_10112353 442
231 3300025298 Ga0209050_1004984 Ga0209050_10049842 442
232 3300025303 Ga0209051_1001679 Ga0209051_10016792 442
233 3300025304 Ga0209257_1001108 Ga0209257_100110814 442
234 3300028380 Ga0268265_10090412 Ga0268265_100904122 442
235 3300042438 Ga0439459_0006875 Ga0439459_0006875_243_1574 442
236 3300044656 Ga0466969_0021121 Ga0466969_0021121_1565_2920 442
237 3300044684 Ga0466966_0002399 Ga0466966_0002399_5846_7201 442
238 3300044693 Ga0466961_0054075 Ga0466961_0054075_51_1406 442
239 3300045049 Ga0466959_0010243 Ga0466959_0010243_1420_2775 442
240 3300005548 Ga0070665_100000436 Ga0070665_10000043622 443
241 3300013296 Ga0157374_10000708 Ga0157374_100007083 443
242 3300014325 Ga0163163_10196770 Ga0163163_101967702 443
243 3300028379 Ga0268266_10001005 Ga0268266_1000100510 443
244 iso_pu_bacteria 2919506607 2919508082 443
245 iso_pu_bacteria 2773857770 2774439819 446
246 3300048088 Ga0495602_0024331 Ga0495602_0024331_3265_4620 447
247 3300013102 Ga0157371_10001426 Ga0157371_1000142620 448
248 3300046453 Ga0495627_000585 Ga0495627_000585_5096_6442 448
249 3300046525 Ga0495663_0000061 Ga0495663_0000061_31808_33154 448
250 3300047470 Ga0495681_0044686 Ga0495681_0044686_682_2028 448
251 2162886007 SwRhRL2b_contig_585231 SwRhRL2b_0340.00000790 450
252 3300005289 Ga0065704_10000754 Ga0065704_1000075410 450
253 3300009011 Ga0105251_10003657 Ga0105251_100036572 450
254 3300017792 Ga0163161_10000607 Ga0163161_1000060720 450
255 3300025735 Ga0207713_1001406 Ga0207713_10014069 450
256 3300046522 Ga0495643_0001370 Ga0495643_0001370_16317_17669 450

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00006

ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

184

394

0.99

PF18269

T3SS_ATPase_C

T3SS EscN ATPase C-terminal domain

401

471

0.89

PF02874

ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

39

127

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dpy-assembly2.cif.gz_B crystal structure of the flagellar type iii atpase flii 0.9524 20 439
2dpy-assembly1.cif.gz_A crystal structure of the flagellar type iii atpase flii 0.9518 23 439
6n73-assembly2.cif.gz_B crystal structure of atpase delta1-79 spa47 r271a 0.9439 97 440
6n72-assembly2.cif.gz_B crystal structure of atpase delta1-79 spa47 e267r 0.9437 97 440
5syr-assembly2.cif.gz_B crystal structure of atpase delta1-79 spa47 r350a 0.9435 97 440
ID Description Score Start End Superfamily
2dpyB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9755 94 361 3.40.50.300
af_A0A0R0JZ78_6_157_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9708 225 364 3.40.50.300
2dpyB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9684 94 361 3.40.50.300
2dpyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9518 23 439 3.40.50.12240
af_A0A2P2CLF9_96_382_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.94 96 367 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A357D4L8-F1-model_v4 EscN/YscN/HrcN family type III secretion system ATPase 0.9859 184 334 GO:0005524
GO:0045261
GO:0046933
AF-A0A3C0ASQ7-F1-model_v4 EscN/YscN/HrcN family type III secretion system ATPase 0.9802 129 257 GO:0005524
GO:0045261
GO:0046933
AF-A0A418GJD1-F1-model_v4 H(+)-transporting two-sector ATPase (EC 7.1.2.2) 0.9782 97 267 GO:0005524
GO:0016787
GO:0045261
GO:0046933
AF-B0YNZ6-F1-model_v4 protein-secreting ATPase (EC 7.4.2.8) 0.9741 153 387 GO:0005524
GO:0016887
GO:0045261
GO:0046933
AF-Q4ACK6-F1-model_v4 Flagellum-specific ATP synthase (EC 7.1.2.2) 0.974 104 364 GO:0005524
GO:0005737
GO:0016887
GO:0030254
GO:0030257
GO:0045261
GO:0046933
GO:0046961

Feature Viewer

pLDDT pTM Quality
90.24 0.89 High
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Predicted Structure (AlphaFold2)

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