F366600

General Info

Members Datasets Scaffolds Average Seq Length
256 182 512 196

Family's Representative Sequence

Representative Sequence 3300030745|Ga0316182_1049483|Ga0316182_10494835
Length 189
Sequence LNLKSTRENIVETADRLFYERGYEHTSFADVAHAVGISRGNFYHHFKSKDDILIAVIGVRIANTRRMLESWEAADAPAARIRSFFDMLIANRSPIMRHGCPVGSLCAELAKLDHVAQYEARQLFSLFREWLGRQFAQLGRSSDADSLALHVLARSQGIAQLANVFHDEAFIRREVEFMHGWLSALLAST

Samples

Sample ID Description Type Environment
1 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
7 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
40 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
49 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
80 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
84 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
85 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
86 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
87 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
88 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
89 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
90 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
96 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
100 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
101 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
102 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
103 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
104 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
105 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
106 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
107 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
108 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
109 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
110 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
111 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
116 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
117 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
118 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
140 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
141 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
142 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
143 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
144 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
145 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
146 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
155 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
156 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
157 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
158 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
159 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
160 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
161 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
162 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
163 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
164 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
165 2509276019 Ensifer aridi TW10 Isolate Nodule
166 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
167 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
168 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
169 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
170 2802429637 Rhizobium anhuiense C15 Isolate Nodule
171 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
172 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
173 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
174 2904424332 Duganella sp. 1411 Isolate Rhizosphere
175 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
176 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
177 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
178 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
179 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
180 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
181 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
182 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.19
Metatranscriptomes 0.39
Isolates 7.42

Biome Distribution

Category Percentage (%)
Aerial Root 0.39
Bulb 0
Endosphere 33.98
Nodule 3.12
Rhizoplane 0.78
Rhizosphere 47.66
Stem 0
Stem Tuber 0
Unclassified 2.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316182_1049483 3300030745 Unclassified 1669
2 JGI25159J45721_1000669 3300002987 Bacteria 15125
3 JGI25153J46596_10000069 3300003215 Bacteria 117156
4 JGI25153J46596_10088877 3300003215 Bacteria 751
5 rootL2_10006737 3300003322 Bacteria 11067
6 rootL2_10066225 3300003322 Bacteria 1560
7 JGI25160J50197_1000997 3300003354 Bacteria 14672
8 JGI25161J50226_1003253 3300003374 Bacteria 3794
9 JGI25404J52841_10006544 3300003659 Bacteria 2444
10 Ga0055526_1001363 3300003771 Bacteria 17477
11 Ga0055524_1012453 3300003775 Bacteria 3263
12 Ga0055524_1015522 3300003775 Bacteria 2771
13 Ga0055528_1000248 3300003790 Bacteria 45559
14 Ga0055530_10003811 3300003791 Bacteria 8289
15 Ga0055531_10024913 3300003794 Bacteria 2191
16 Ga0055543_1005562 3300004625 Bacteria 3196
17 Ga0065165_1002433 3300005262 Bacteria 15782
18 Ga0065165_1004994 3300005262 Bacteria 7774
19 Ga0065165_1006008 3300005262 Bacteria 6544
20 Ga0070690_100176526 3300005330 Bacteria 1474
21 Ga0068869_100043224 3300005334 Bacteria 3235
22 Ga0070689_100044578 3300005340 Bacteria 3413
23 Ga0070689_100106909 3300005340 Bacteria 2221
24 Ga0070689_100486117 3300005340 Bacteria 1055
25 Ga0070661_100012292 3300005344 Bacteria 5987
26 Ga0070688_100028898 3300005365 Bacteria 3315
27 Ga0070659_100070824 3300005366 Bacteria 2771
28 Ga0070685_10040603 3300005466 Bacteria 2648
29 Ga0070685_10350056 3300005466 Bacteria 1010
30 Ga0070693_100219868 3300005547 Bacteria 1244
31 Ga0070664_100012339 3300005564 Bacteria 6943
32 Ga0068856_100116002 3300005614 Bacteria 2678
33 Ga0068870_10284446 3300005840 Unclassified 1038
34 Ga0068863_100251503 3300005841 Bacteria 1707
35 Ga0068860_100443956 3300005843 Bacteria 1289
36 Ga0068862_100233245 3300005844 Bacteria 1670
37 Ga0081455_10028529 3300005937 Bacteria 5099
38 Ga0081455_10049670 3300005937 Bacteria 3615
39 Ga0081455_10117937 3300005937 Bacteria 2097
40 Ga0081455_10316958 3300005937 Bacteria 1112
41 Ga0081538_10002197 3300005981 Bacteria 19338
42 Ga0081538_10148516 3300005981 Bacteria 1066
43 Ga0081540_1000245 3300005983 Bacteria 56994
44 Ga0081539_10010509 3300005985 Bacteria 7504
45 Ga0081539_10161794 3300005985 Bacteria 1066
46 Ga0075365_10125528 3300006038 Bacteria 1773
47 Ga0075365_10196019 3300006038 Bacteria 1414
48 Ga0075365_10207541 3300006038 Bacteria 1373
49 Ga0075368_10073864 3300006042 Bacteria 1380
50 Ga0075368_10125819 3300006042 Bacteria 1063
51 Ga0075363_100187525 3300006048 Bacteria 1179
52 Ga0075364_10135284 3300006051 Bacteria 1655
53 Ga0075364_10170079 3300006051 Bacteria 1473
54 Ga0075364_10189866 3300006051 Bacteria 1391
55 Ga0075362_10053011 3300006177 Bacteria 1819
56 Ga0075362_10146469 3300006177 Bacteria 1131
57 Ga0075367_10001661 3300006178 Bacteria 9704
58 Ga0075367_10038920 3300006178 Bacteria 2771
59 Ga0075367_10079447 3300006178 Bacteria 1982
60 Ga0075367_10098482 3300006178 Bacteria 1785
61 Ga0075367_10337626 3300006178 Bacteria 950
62 Ga0075369_10001132 3300006186 Bacteria 8979
63 Ga0075369_10002903 3300006186 Bacteria 6186
64 Ga0075427_10054015 3300006194 Bacteria 695
65 Ga0075366_10068683 3300006195 Bacteria 2108
66 Ga0097621_100110165 3300006237 Bacteria 2326
67 Ga0097621_100306289 3300006237 Bacteria 1404
68 Ga0075370_10042428 3300006353 Bacteria 2570
69 Ga0075370_10379361 3300006353 Bacteria 847
70 Ga0075428_100104995 3300006844 Bacteria 3081
71 Ga0075428_100129009 3300006844 Bacteria 2751
72 Ga0075430_100115098 3300006846 Bacteria 2241
73 Ga0075430_100185734 3300006846 Bacteria 1729
74 Ga0075430_100290802 3300006846 Bacteria 1351
75 Ga0075431_100095235 3300006847 Bacteria 3073
76 Ga0075431_100260088 3300006847 Bacteria 1761
77 Ga0075429_100849027 3300006880 Bacteria 799
78 Ga0079104_1049842 3300006946 Bacteria 937
79 Ga0105244_10078560 3300009036 Bacteria 1636
80 Ga0111539_10294049 3300009094 Bacteria 1890
81 Ga0111539_10803653 3300009094 Bacteria 1094
82 Ga0105245_10468624 3300009098 Bacteria 1271
83 Ga0114129_10123940 3300009147 Bacteria 3554
84 Ga0105243_10052011 3300009148 Bacteria 3243
85 Ga0105243_11236598 3300009148 Bacteria 761
86 Ga0105238_10245289 3300009551 Bacteria 1769
87 Ga0105246_10121209 3300011119 Bacteria 1938
88 Ga0105246_10146303 3300011119 Bacteria 1783
89 Ga0157378_10288415 3300013297 Bacteria 1584
90 Ga0209436_100102 3300025208 Bacteria 42263
91 Ga0209565_1004017 3300025263 Bacteria 4585
92 Ga0209565_1016397 3300025263 Bacteria 1648
93 Ga0209673_1000708 3300025273 Bacteria 47031
94 Ga0209673_1059049 3300025273 Bacteria 968
95 Ga0209130_1001077 3300025284 Bacteria 20443
96 Ga0209025_1047631 3300025294 Bacteria 1748
97 Ga0209564_1000727 3300025295 Bacteria 47031
98 Ga0209564_1003903 3300025295 Bacteria 9564
99 Ga0209758_1000005 3300025297 Bacteria 1368918
100 Ga0209758_1001491 3300025297 Bacteria 27324
101 Ga0209758_1014171 3300025297 Bacteria 4267
102 Ga0209758_1096055 3300025297 Unclassified 855
103 Ga0209050_1001303 3300025298 Bacteria 28129
104 Ga0209050_1004714 3300025298 Bacteria 9036
105 Ga0209256_1002100 3300025299 Bacteria 17392
106 Ga0209256_1005399 3300025299 Bacteria 7388
107 Ga0207426_1001486 3300025302 Bacteria 19207
108 Ga0207426_1104412 3300025302 Bacteria 725
109 Ga0209051_1004917 3300025303 Bacteria 8000
110 Ga0209257_1000303 3300025304 Bacteria 107862
111 Ga0209257_1052837 3300025304 Bacteria 1139
112 Ga0207655_1078467 3300025728 Bacteria 1200
113 Ga0207695_10036623 3300025913 Bacteria 5302
114 Ga0207649_10002142 3300025920 Bacteria 11172
115 Ga0207690_10076061 3300025932 Bacteria 2330
116 Ga0207670_10029652 3300025936 Bacteria 3487
117 Ga0207679_10010960 3300025945 Bacteria 5850
118 Ga0207651_10843009 3300025960 Bacteria 814
119 Ga0207702_10170478 3300026078 Bacteria 1995
120 Ga0207641_10251308 3300026088 Bacteria 1651
121 Ga0207641_11587954 3300026088 Bacteria 656
122 Ga0207675_100190642 3300026118 Bacteria 1966
123 Ga0209281_1031742 3300027111 Bacteria 939
124 Ga0209371_1004009 3300027312 Bacteria 6678
125 Ga0209813_10051807 3300027866 Bacteria 1285
126 Ga0209813_10164447 3300027866 Bacteria 802
127 Ga0268265_10087804 3300028380 Bacteria 2475
128 Ga0268256_1003742 3300030500 Bacteria 6678
129 Ga0307512_10167478 3300030522 Bacteria 1269
130 Ga0316176_1121076 3300030732 Bacteria 1439
131 Ga0314311_1195574 3300030733 Bacteria 2589
132 Ga0316178_1162757 3300030735 Bacteria 3631
133 Ga0316183_1026033 3300030742 Bacteria 4388
134 Ga0316181_1066333 3300030744 Bacteria 4001
135 Ga0316575_10057713 3300031665 Bacteria 1548
136 Ga0316575_10125696 3300031665 Bacteria 1050
137 Ga0307410_10159572 3300031852 Bacteria 1688
138 Ga0307412_10045489 3300031911 Bacteria 2869
139 Ga0307416_100209799 3300032002 Bacteria 1857
140 Ga0307415_100519369 3300032126 Bacteria 1045
141 Ga0316583_10096314 3300032133 Bacteria 1032
142 Ga0316587_1039033 3300033529 Bacteria 855
143 Ga0373931_0761495 3300035691 Bacteria 643
144 Ga0395905_0079166 3300037471 Bacteria 3080
145 Ga0400484_04331 3300038725 Bacteria 6085
146 Ga0400484_17637 3300038725 Unclassified 1189
147 Ga0400484_23339 3300038725 Bacteria 2538
148 Ga0400490_12170 3300038726 Bacteria 70825
149 Ga0400490_33064 3300038726 Bacteria 5771
150 Ga0400490_45664 3300038726 Bacteria 14244
151 Ga0400491_13580 3300038727 Bacteria 6376
152 Ga0400485_01669 3300038735 Bacteria 1829
153 Ga0400485_08495 3300038735 Bacteria 15924
154 Ga0400488_23452 3300038741 Bacteria 3827
155 Ga0400488_37425 3300038741 Bacteria 2384
156 Ga0400486_14519 3300038742 Bacteria 15895
157 Ga0400486_28451 3300038742 Bacteria 3239
158 Ga0400483_123616 3300039062 Unclassified 1960
159 Ga0400483_220485 3300039062 Bacteria 6551
160 Ga0400483_279707 3300039062 Bacteria 11896
161 Ga0400483_283496 3300039062 Bacteria 1785
162 Ga0400483_284085 3300039062 Bacteria 2409
163 Ga0400487_16205 3300039110 Bacteria 2280
164 Ga0400487_45860 3300039110 Bacteria 4886
165 Ga0400487_50872 3300039110 Bacteria 2170
166 Ga0400487_56710 3300039110 Bacteria 2310
167 Ga0400487_64428 3300039110 Bacteria 30547
168 Ga0439436_0087916 3300041404 Bacteria 865
169 Ga0439466_0050890 3300041411 Bacteria 1358
170 Ga0439445_0139571 3300042004 Bacteria 702
171 Ga0439449_0000465 3300042007 Bacteria 15109
172 Ga0439462_0020874 3300042015 Bacteria 1710
173 Ga0466960_0050810 3300044901 Bacteria 2000
174 Ga0466959_0106193 3300045049 Bacteria 2008
175 Ga0495638_0337250 3300046460 Bacteria 800
176 Ga0495606_0000039 3300046507 Bacteria 224632
177 Ga0495620_0000573 3300046515 Bacteria 23141
178 Ga0495648_0016346 3300046524 Bacteria 5353
179 Ga0495626_0003189 3300048091 Bacteria 10674
180 Ga0496104_0057711 3300048907 Bacteria 3673
181 Ga0496105_0186497 3300048908 Bacteria 1697
182 Ga0496116_0022760 3300048919 Bacteria 4687
183 Ga0496119_0009072 3300048922 Bacteria 8617
184 Ga0496124_0056133 3300048927 Bacteria 3323
185 Ga0496126_0015559 3300048929 Bacteria 7645
186 Ga0501033_0000145 3300049570 Bacteria 68524
187 Ga0501034_0912450 3300049571 Bacteria 766
188 Ga0501042_0498676 3300049578 Bacteria 884
189 Ga0501071_0524279 3300049587 Unclassified 909
190 Ga0501073_0151336 3300049589 Bacteria 1608
191 Ga0501077_0477121 3300049593 Bacteria 799
192 Ga0501225_0001811 3300049705 Bacteria 6692
193 Ga0501079_0388263 3300049741 Bacteria 1095
194 Ga0501080_0167012 3300049742 Bacteria 2030
195 Ga0501081_0304804 3300049743 Bacteria 1169
196 Ga0501083_0010848 3300049744 Bacteria 6410
197 Ga0501035_0008393 3300049822 Bacteria 9618
198 Ga0501044_0229153 3300049823 Bacteria 1806
199 Ga0501045_0489064 3300049824 Bacteria 914
200 nmdc:mga03683_39247_c1 3300050489 Bacteria 1938
201 nmdc:mga03n38_149470_c1 3300050490 Bacteria 1174
202 nmdc:mga03n38_42158_c1 3300050490 Bacteria 1993
203 nmdc:mga00v17_202428_c1 3300050491 Bacteria 1283
204 nmdc:mga00v17_208979_c1 3300050491 Bacteria 1263
205 nmdc:mga00v17_254147_c1 3300050491 Bacteria 1140
206 nmdc:mga0yw44_135470_c1 3300050492 Bacteria 1598
207 nmdc:mga0yw44_81486_c1 3300050492 Bacteria 2029
208 nmdc:mga0k408_21982_c1 3300050493 Bacteria 2863
209 nmdc:mga06z11_396197_c1 3300050494 Bacteria 831
210 nmdc:mga06z11_4401_c1 3300050494 Bacteria 5546
211 nmdc:mga06z11_45716_c1 3300050494 Bacteria 2215
212 nmdc:mga04h51_191051_c1 3300050495 Bacteria 801
213 nmdc:mga04h51_57455_c1 3300050495 Bacteria 1324
214 nmdc:mga07m45_142280_c1 3300050496 Bacteria 1389
215 nmdc:mga09592_207407_c1 3300050508 Bacteria 1697
216 nmdc:mga0qj67_137023_c1 3300050509 Bacteria 1983
217 nmdc:mga0qj67_171449_c1 3300050509 Bacteria 1762
218 nmdc:mga0qj67_331708_c1 3300050509 Bacteria 1231
219 nmdc:mga06r32_101498_c1 3300050510 Bacteria 2824
220 nmdc:mga06r32_182747_c1 3300050510 Bacteria 2083
221 nmdc:mga08y16_541584_c1 3300050511 Bacteria 1179
222 nmdc:mga08y16_927296_c1 3300050511 Bacteria 855
223 nmdc:mga0n895_234119_c1 3300050512 Bacteria 1864
224 nmdc:mga0sz30_296641_c1 3300050516 Bacteria 721
225 nmdc:mga0sz30_8674_c1 3300050516 Bacteria 3846
226 Ga0495601_0591488 3300053077 Bacteria 712
227 Ga0500643_019214 3300053087 Bacteria 2254
228 Ga0500644_0161773 3300053088 Bacteria 905
229 Ga0500646_0023676 3300053090 Bacteria 1648
230 Ga0500642_0048505 3300053130 Bacteria 1865
231 Ga0500658_0048739 3300053134 Bacteria 1723
232 Ga0500658_0138111 3300053134 Bacteria 1091
233 Ga0500604_0076081 3300053151 Bacteria 1078
234 Ga0500633_0048142 3300053160 Bacteria 1461
235 Ga0500634_0222263 3300053161 Bacteria 809
236 Ga0500609_000896 3300053731 Bacteria 4467
237 Ga0590075_023230 3300059424 Bacteria 1554
238 2509111843 2508501122 Bacteria 6292184
239 2509375776 2509276019 Bacteria 6802256
240 2512530594 2512047086 Bacteria 6850303
241 2757571752 2757320392 Bacteria 3737298
242 2787507086 2786546548 Bacteria 4745694
243 2792640774 2791355094 Bacteria 7011481
244 2806077354 2802429637 Bacteria 7067217
245 2819242742 2818991272 Bacteria 4622173
246 2819593578 2818991445 Bacteria 4955017
247 2850081096 2850079185 Bacteria 6848280
248 2904424814 2904424332 Bacteria 7633521
249 2919466111 2919462493 Bacteria 5817112
250 2978972423 2978969890 Bacteria 5400756
251 2984590674 2984587000 Bacteria 5263363
252 2989777979 2989776772 Bacteria 4843317
253 8005246780 8005246636 Bacteria 4933972
254 8005317530 8005314921 Bacteria 7072929
255 8021630249 8021626552 Bacteria 4665214
256 8021648658 8021648035 Bacteria 4772378
257 Ga0316182_1049483
258 JGI25159J45721_1000669
259 JGI25153J46596_10000069
260 JGI25153J46596_10088877
261 rootL2_10006737
262 rootL2_10066225
263 JGI25160J50197_1000997
264 JGI25161J50226_1003253
265 JGI25404J52841_10006544
266 Ga0055526_1001363
267 Ga0055524_1012453
268 Ga0055524_1015522
269 Ga0055528_1000248
270 Ga0055530_10003811
271 Ga0055531_10024913
272 Ga0055543_1005562
273 Ga0065165_1002433
274 Ga0065165_1004994
275 Ga0065165_1006008
276 Ga0070690_100176526
277 Ga0068869_100043224
278 Ga0070689_100044578
279 Ga0070689_100106909
280 Ga0070689_100486117
281 Ga0070661_100012292
282 Ga0070688_100028898
283 Ga0070659_100070824
284 Ga0070685_10040603
285 Ga0070685_10350056
286 Ga0070693_100219868
287 Ga0070664_100012339
288 Ga0068856_100116002
289 Ga0068870_10284446
290 Ga0068863_100251503
291 Ga0068860_100443956
292 Ga0068862_100233245
293 Ga0081455_10028529
294 Ga0081455_10049670
295 Ga0081455_10117937
296 Ga0081455_10316958
297 Ga0081538_10002197
298 Ga0081538_10148516
299 Ga0081540_1000245
300 Ga0081539_10010509
301 Ga0081539_10161794
302 Ga0075365_10125528
303 Ga0075365_10196019
304 Ga0075365_10207541
305 Ga0075368_10073864
306 Ga0075368_10125819
307 Ga0075363_100187525
308 Ga0075364_10135284
309 Ga0075364_10170079
310 Ga0075364_10189866
311 Ga0075362_10053011
312 Ga0075362_10146469
313 Ga0075367_10001661
314 Ga0075367_10038920
315 Ga0075367_10079447
316 Ga0075367_10098482
317 Ga0075367_10337626
318 Ga0075369_10001132
319 Ga0075369_10002903
320 Ga0075427_10054015
321 Ga0075366_10068683
322 Ga0097621_100110165
323 Ga0097621_100306289
324 Ga0075370_10042428
325 Ga0075370_10379361
326 Ga0075428_100104995
327 Ga0075428_100129009
328 Ga0075430_100115098
329 Ga0075430_100185734
330 Ga0075430_100290802
331 Ga0075431_100095235
332 Ga0075431_100260088
333 Ga0075429_100849027
334 Ga0079104_1049842
335 Ga0105244_10078560
336 Ga0111539_10294049
337 Ga0111539_10803653
338 Ga0105245_10468624
339 Ga0114129_10123940
340 Ga0105243_10052011
341 Ga0105243_11236598
342 Ga0105238_10245289
343 Ga0105246_10121209
344 Ga0105246_10146303
345 Ga0157378_10288415
346 Ga0209436_100102
347 Ga0209565_1004017
348 Ga0209565_1016397
349 Ga0209673_1000708
350 Ga0209673_1059049
351 Ga0209130_1001077
352 Ga0209025_1047631
353 Ga0209564_1000727
354 Ga0209564_1003903
355 Ga0209758_1000005
356 Ga0209758_1001491
357 Ga0209758_1014171
358 Ga0209758_1096055
359 Ga0209050_1001303
360 Ga0209050_1004714
361 Ga0209256_1002100
362 Ga0209256_1005399
363 Ga0207426_1001486
364 Ga0207426_1104412
365 Ga0209051_1004917
366 Ga0209257_1000303
367 Ga0209257_1052837
368 Ga0207655_1078467
369 Ga0207695_10036623
370 Ga0207649_10002142
371 Ga0207690_10076061
372 Ga0207670_10029652
373 Ga0207679_10010960
374 Ga0207651_10843009
375 Ga0207702_10170478
376 Ga0207641_10251308
377 Ga0207641_11587954
378 Ga0207675_100190642
379 Ga0209281_1031742
380 Ga0209371_1004009
381 Ga0209813_10051807
382 Ga0209813_10164447
383 Ga0268265_10087804
384 Ga0268256_1003742
385 Ga0307512_10167478
386 Ga0316176_1121076
387 Ga0314311_1195574
388 Ga0316178_1162757
389 Ga0316183_1026033
390 Ga0316181_1066333
391 Ga0316575_10057713
392 Ga0316575_10125696
393 Ga0307410_10159572
394 Ga0307412_10045489
395 Ga0307416_100209799
396 Ga0307415_100519369
397 Ga0316583_10096314
398 Ga0316587_1039033
399 Ga0373931_0761495
400 Ga0395905_0079166
401 Ga0400484_04331
402 Ga0400484_17637
403 Ga0400484_23339
404 Ga0400490_12170
405 Ga0400490_33064
406 Ga0400490_45664
407 Ga0400491_13580
408 Ga0400485_01669
409 Ga0400485_08495
410 Ga0400488_23452
411 Ga0400488_37425
412 Ga0400486_14519
413 Ga0400486_28451
414 Ga0400483_123616
415 Ga0400483_220485
416 Ga0400483_279707
417 Ga0400483_283496
418 Ga0400483_284085
419 Ga0400487_16205
420 Ga0400487_45860
421 Ga0400487_50872
422 Ga0400487_56710
423 Ga0400487_64428
424 Ga0439436_0087916
425 Ga0439466_0050890
426 Ga0439445_0139571
427 Ga0439449_0000465
428 Ga0439462_0020874
429 Ga0466960_0050810
430 Ga0466959_0106193
431 Ga0495638_0337250
432 Ga0495606_0000039
433 Ga0495620_0000573
434 Ga0495648_0016346
435 Ga0495626_0003189
436 Ga0496104_0057711
437 Ga0496105_0186497
438 Ga0496116_0022760
439 Ga0496119_0009072
440 Ga0496124_0056133
441 Ga0496126_0015559
442 Ga0501033_0000145
443 Ga0501034_0912450
444 Ga0501042_0498676
445 Ga0501071_0524279
446 Ga0501073_0151336
447 Ga0501077_0477121
448 Ga0501225_0001811
449 Ga0501079_0388263
450 Ga0501080_0167012
451 Ga0501081_0304804
452 Ga0501083_0010848
453 Ga0501035_0008393
454 Ga0501044_0229153
455 Ga0501045_0489064
456 nmdc:mga03683_39247_c1
457 nmdc:mga03n38_149470_c1
458 nmdc:mga03n38_42158_c1
459 nmdc:mga00v17_202428_c1
460 nmdc:mga00v17_208979_c1
461 nmdc:mga00v17_254147_c1
462 nmdc:mga0yw44_135470_c1
463 nmdc:mga0yw44_81486_c1
464 nmdc:mga0k408_21982_c1
465 nmdc:mga06z11_396197_c1
466 nmdc:mga06z11_4401_c1
467 nmdc:mga06z11_45716_c1
468 nmdc:mga04h51_191051_c1
469 nmdc:mga04h51_57455_c1
470 nmdc:mga07m45_142280_c1
471 nmdc:mga09592_207407_c1
472 nmdc:mga0qj67_137023_c1
473 nmdc:mga0qj67_171449_c1
474 nmdc:mga0qj67_331708_c1
475 nmdc:mga06r32_101498_c1
476 nmdc:mga06r32_182747_c1
477 nmdc:mga08y16_541584_c1
478 nmdc:mga08y16_927296_c1
479 nmdc:mga0n895_234119_c1
480 nmdc:mga0sz30_296641_c1
481 nmdc:mga0sz30_8674_c1
482 Ga0495601_0591488
483 Ga0500643_019214
484 Ga0500644_0161773
485 Ga0500646_0023676
486 Ga0500642_0048505
487 Ga0500658_0048739
488 Ga0500658_0138111
489 Ga0500604_0076081
490 Ga0500633_0048142
491 Ga0500634_0222263
492 Ga0500609_000896
493 Ga0590075_023230
494 2509111843
495 2509375776
496 2512530594
497 2757571752
498 2787507086
499 2792640774
500 2806077354
501 2819242742
502 2819593578
503 2850081096
504 2904424814
505 2919466111
506 2978972423
507 2984590674
508 2989777979
509 8005246780
510 8005317530
511 8021630249
512 8021648658

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

10

56

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dpj-assembly2.cif.gz_H the crystal structure of a tetr transcription regulator from silicibacter pomeroyi dss 0.9713 6 185
3dpj-assembly2.cif.gz_H the crystal structure of a tetr transcription regulator from silicibacter pomeroyi dss 0.926 6 185
6zui-assembly1.cif.gz_A crystal structure of the cys-ser mutant of the cpyfp-based biosensor for hypochlorous acid 0.9054 6 87
3qbm-assembly1.cif.gz_B crystal structure of a tetr transcriptional regulator (caur_2221) from chloroflexus aurantiacus j-10-fl at 1.80 a resolution 0.8689 3 184
4yze-assembly1.cif.gz_A crystal structure of e.coli nemr reduced form 0.8684 5 181
ID Description Score Start End Superfamily
3dpjA00 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;Tetracycline Repressor, domain 2 0.9705 2 185 1.10.357.10
3mvpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9266 1 46 1.10.10.60
3dpjA00 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;Tetracycline Repressor, domain 2 0.925 2 185 1.10.357.10
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9248 6 52 1.10.10.60
3mvpB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9151 5 46 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A0M8Y4A1-F1-model_v4 Transcriptional regulator 0.9991 18 189 GO:0003677
GO:0006355
AF-A0A229UGI7-F1-model_v4 TetR family transcriptional regulator 0.9976 7 195 GO:0003677
GO:0006355
AF-A0A329AGX7-F1-model_v4 deleted 0.9963 6 194
AF-A0A4R3QFG6-F1-model_v4 TetR family transcriptional regulator 0.9944 1 190 GO:0003677
GO:0006355
AF-A0A431VLC0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.993 7 190 GO:0003677
GO:0006355

Map