F365956

General Info

Members Datasets Scaffolds Average Seq Length
255 175 255 156

Family's Representative Sequence

Representative Sequence 3300046543|Ga0495645_0511569|Ga0495645_0511569_27_590
Length 187
Sequence MRPRAPFHTELCMAHRDARVQKARATEERLSMHDATITLRPIGVVRGGRAEPVDDDWDRVAVAIELDPVQFKADATASLGDFSHIEVVYHFNRVPDDEINSGARHPRGRQDWPLVGIFAQRGKGRPNRIGVTVCRLLSVNGLTLNVRGLDAIDGTPVLDIKPVMKGFLPRGEVKEPEWAAELMKGYW

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
57 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
86 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
93 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
94 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
115 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
116 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
117 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
137 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
138 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
139 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
140 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
141 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
154 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
169 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
170 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
171 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
172 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.22
Metatranscriptomes 0.78
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.2
Nodule 0
Rhizoplane 4.31
Rhizosphere 81.18
Stem 0
Stem Tuber 0
Unclassified 4.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10010300 3300003320 Bacteria 36200
2 rootL2_10378192 3300003322 Unclassified 1527
3 rootH1_10209300 3300003323 Bacteria 1079
4 Ga0070658_10363267 3300005327 Bacteria 1240
5 Ga0070658_10723295 3300005327 Bacteria 864
6 Ga0070683_100140864 3300005329 Bacteria 2285
7 Ga0070683_100211990 3300005329 Bacteria 1840
8 Ga0070666_10000406 3300005335 Bacteria 26921
9 Ga0070666_10135287 3300005335 Unclassified 1714
10 Ga0070666_10850287 3300005335 Bacteria 673
11 Ga0070660_100022070 3300005339 Bacteria 4703
12 Ga0070661_100935285 3300005344 Bacteria 717
13 Ga0070671_100042626 3300005355 Bacteria 3772
14 Ga0070673_100019526 3300005364 Bacteria 4866
15 Ga0070659_100376668 3300005366 Bacteria 1195
16 Ga0070667_100028682 3300005367 Bacteria 4635
17 Ga0070714_100055448 3300005435 Bacteria 3387
18 Ga0070714_101338901 3300005435 Bacteria 699
19 Ga0070711_100242168 3300005439 Bacteria 1411
20 Ga0070694_100215170 3300005444 Unclassified 1439
21 Ga0070708_100548521 3300005445 Bacteria 1090
22 Ga0070708_101177127 3300005445 Unclassified 717
23 Ga0070663_100210021 3300005455 Unclassified 1524
24 Ga0070685_10024858 3300005466 Bacteria 3294
25 Ga0070707_100273462 3300005468 Unclassified 1642
26 Ga0070699_100038331 3300005518 Bacteria 4150
27 Ga0070699_100193236 3300005518 Unclassified 1808
28 Ga0070697_100002730 3300005536 Bacteria 13594
29 Ga0070697_100425079 3300005536 Bacteria 1155
30 Ga0068853_100009726 3300005539 Bacteria 7756
31 Ga0068853_100187460 3300005539 Bacteria 1878
32 Ga0070693_100092372 3300005547 Bacteria 1827
33 Ga0070665_100000745 3300005548 Bacteria 43325
34 Ga0070665_100426114 3300005548 Bacteria 1335
35 Ga0070665_100640377 3300005548 Bacteria 1076
36 Ga0068855_100014236 3300005563 Bacteria 9582
37 Ga0068855_100533430 3300005563 Bacteria 1272
38 Ga0068857_100731990 3300005577 Bacteria 941
39 Ga0068856_100091526 3300005614 Bacteria 3026
40 Ga0068852_100051138 3300005616 Bacteria 3544
41 Ga0068852_100669331 3300005616 Bacteria 1046
42 Ga0068863_100159296 3300005841 Bacteria 2162
43 Ga0075365_10002052 3300006038 Bacteria 9599
44 Ga0075365_10116851 3300006038 Bacteria 1837
45 Ga0075368_10032708 3300006042 Bacteria 2021
46 Ga0075368_10248203 3300006042 Bacteria 760
47 Ga0075363_100027592 3300006048 Bacteria 2912
48 Ga0075364_10226238 3300006051 Bacteria 1270
49 Ga0075362_10263856 3300006177 Bacteria 849
50 Ga0075367_10045088 3300006178 Bacteria 2587
51 Ga0075367_10372526 3300006178 Bacteria 902
52 Ga0097621_100045070 3300006237 Bacteria 3561
53 Ga0097621_100304882 3300006237 Bacteria 1407
54 Ga0075370_10196350 3300006353 Bacteria 1190
55 Ga0068871_100052852 3300006358 Bacteria 3291
56 Ga0068871_100398948 3300006358 Bacteria 1224
57 Ga0075428_100544172 3300006844 Bacteria 1241
58 Ga0075434_100268269 3300006871 Bacteria 1726
59 Ga0105240_10000582 3300009093 Bacteria 67645
60 Ga0105240_10160493 3300009093 Bacteria 2671
61 Ga0105243_10255266 3300009148 Bacteria 1567
62 Ga0105241_10145185 3300009174 Bacteria 1936
63 Ga0105242_10281026 3300009176 Unclassified 1512
64 Ga0105248_10059804 3300009177 Bacteria 4280
65 Ga0105248_10308379 3300009177 Bacteria 1782
66 Ga0105237_10059698 3300009545 Bacteria 3815
67 Ga0105238_10030822 3300009551 Bacteria 5458
68 Ga0105238_10154721 3300009551 Bacteria 2268
69 Ga0105238_11718471 3300009551 Bacteria 659
70 Ga0105239_10464123 3300010375 Bacteria 1437
71 Ga0105239_10637675 3300010375 Bacteria 1216
72 Ga0157373_10001657 3300013100 Bacteria 17003
73 Ga0157370_10152927 3300013104 Bacteria 2147
74 Ga0157370_10402138 3300013104 Bacteria 1260
75 Ga0157369_10002775 3300013105 Bacteria 20913
76 Ga0157369_10134667 3300013105 Bacteria 2616
77 Ga0157378_10089093 3300013297 Bacteria 2801
78 Ga0157372_10255173 3300013307 Bacteria 2036
79 Ga0213873_10063663 3300021358 Bacteria 1003
80 Ga0213876_10225028 3300021384 Bacteria 997
81 Ga0224572_1037272 3300024225 Bacteria 920
82 Ga0209257_1007325 3300025304 Bacteria 6698
83 Ga0207680_10067029 3300025903 Unclassified 2210
84 Ga0207705_10000611 3300025909 Bacteria 29892
85 Ga0207654_10620539 3300025911 Bacteria 773
86 Ga0207707_10001384 3300025912 Bacteria 22525
87 Ga0207695_10000004 3300025913 Bacteria 1288665
88 Ga0207695_10143551 3300025913 Bacteria 2333
89 Ga0207695_10653615 3300025913 Bacteria 932
90 Ga0207671_10500444 3300025914 Bacteria 969
91 Ga0207660_10039888 3300025917 Bacteria 3284
92 Ga0207657_10000815 3300025919 Bacteria 32909
93 Ga0207649_10008298 3300025920 Bacteria 5660
94 Ga0207649_10118440 3300025920 Bacteria 1782
95 Ga0207652_10011860 3300025921 Bacteria 7031
96 Ga0207646_10430210 3300025922 Unclassified 1191
97 Ga0207694_10000015 3300025924 Bacteria 363898
98 Ga0207694_10103396 3300025924 Bacteria 2259
99 Ga0207664_10041486 3300025929 Bacteria 3585
100 Ga0207644_10445414 3300025931 Unclassified 1063
101 Ga0207644_10474292 3300025931 Bacteria 1030
102 Ga0207690_10069994 3300025932 Bacteria 2415
103 Ga0207709_10214968 3300025935 Bacteria 1382
104 Ga0207711_10092123 3300025941 Bacteria 2667
105 Ga0207661_10411539 3300025944 Bacteria 1227
106 Ga0207667_10000226 3300025949 Bacteria 79075
107 Ga0207640_10737160 3300025981 Bacteria 848
108 Ga0207703_10847394 3300026035 Bacteria 874
109 Ga0207639_10039057 3300026041 Bacteria 3534
110 Ga0207639_10110670 3300026041 Bacteria 2238
111 Ga0207678_10106388 3300026067 Bacteria 2393
112 Ga0207702_10277927 3300026078 Bacteria 1582
113 Ga0207702_11075417 3300026078 Bacteria 798
114 Ga0207648_10313394 3300026089 Bacteria 1409
115 Ga0207674_10514756 3300026116 Bacteria 1156
116 Ga0268266_10000840 3300028379 Bacteria 40097
117 Ga0268266_10988434 3300028379 Bacteria 814
118 Ga0265337_1006386 3300028556 Bacteria 4556
119 Ga0265318_10000025 3300028577 Bacteria 159237
120 Ga0265318_10013228 3300028577 Bacteria 3495
121 Ga0265338_10007026 3300028800 Bacteria 14128
122 Ga0265762_1033677 3300030760 Unclassified 981
123 Ga0265770_1024458 3300030878 Unclassified 977
124 Ga0265330_10269441 3300031235 Bacteria 717
125 Ga0265330_10389292 3300031235 Bacteria 589
126 Ga0265320_10000209 3300031240 Bacteria 47757
127 Ga0265320_10000555 3300031240 Bacteria 28773
128 Ga0265325_10009122 3300031241 Bacteria 5810
129 Ga0265325_10037140 3300031241 Bacteria 2576
130 Ga0265325_10052885 3300031241 Bacteria 2084
131 Ga0265325_10318437 3300031241 Bacteria 691
132 Ga0265325_10343034 3300031241 Bacteria 661
133 Ga0265325_10378784 3300031241 Bacteria 622
134 Ga0265329_10129226 3300031242 Bacteria 813
135 Ga0265340_10000052 3300031247 Bacteria 54270
136 Ga0265340_10000319 3300031247 Bacteria 25435
137 Ga0265339_10186632 3300031249 Bacteria 1030
138 Ga0265339_10226703 3300031249 Bacteria 912
139 Ga0265331_10000037 3300031250 Bacteria 197251
140 Ga0265331_10002194 3300031250 Bacteria 13403
141 Ga0265331_10075107 3300031250 Bacteria 1576
142 Ga0265327_10000757 3300031251 Bacteria 50106
143 Ga0265327_10001069 3300031251 Bacteria 38179
144 Ga0265316_10012567 3300031344 Bacteria 7583
145 Ga0265316_10443953 3300031344 Bacteria 931
146 Ga0307509_10080603 3300031507 Bacteria 3366
147 Ga0307408_100044392 3300031548 Bacteria 3167
148 Ga0307408_100384254 3300031548 Bacteria 1201
149 Ga0265313_10001440 3300031595 Bacteria 22235
150 Ga0265313_10001587 3300031595 Bacteria 21094
151 Ga0265314_10019435 3300031711 Bacteria 5264
152 Ga0265314_10020215 3300031711 Bacteria 5142
153 Ga0265314_10032713 3300031711 Bacteria 3821
154 Ga0265314_10044900 3300031711 Bacteria 3128
155 Ga0265314_10068642 3300031711 Bacteria 2382
156 Ga0265314_10115108 3300031711 Bacteria 1702
157 Ga0265314_10218344 3300031711 Bacteria 1114
158 Ga0265314_10638576 3300031711 Bacteria 544
159 Ga0307516_10045835 3300031730 Bacteria 4316
160 Ga0307412_10094493 3300031911 Bacteria 2100
161 Ga0307416_100160790 3300032002 Bacteria 2076
162 Ga0307416_100706332 3300032002 Bacteria 1098
163 Ga0307414_10571740 3300032004 Bacteria 1010
164 Ga0373937_1532535 3300036401 Bacteria 614
165 Ga0395899_0076466 3300037312 Bacteria 2444
166 Ga0395899_0327269 3300037312 Bacteria 1031
167 Ga0395900_0017364 3300037418 Bacteria 7346
168 Ga0395900_0021812 3300037418 Bacteria 6548
169 Ga0395898_0080467 3300037466 Bacteria 3142
170 Ga0395905_0196539 3300037471 Bacteria 1891
171 Ga0395905_0775913 3300037471 Bacteria 861
172 Ga0436365_1358812 3300039437 Bacteria 1213
173 Ga0436365_1797404 3300039437 Bacteria 129057
174 Ga0436365_1846728 3300039437 Bacteria 1014
175 Ga0436363_1262137 3300039450 Bacteria 2293
176 Ga0439466_0154549 3300041411 Bacteria 702
177 Ga0439465_0017419 3300041413 Bacteria 2242
178 Ga0451798_0491710 3300041458 Bacteria 670
179 Ga0439434_0096305 3300042435 Bacteria 950
180 Ga0451577_0002241 3300042876 Bacteria 23482
181 Ga0451577_0381036 3300042876 Bacteria 1280
182 Ga0466965_0508399 3300044683 Bacteria 676
183 Ga0466961_0132787 3300044693 Bacteria 1560
184 Ga0466963_0003213 3300044694 Bacteria 9297
185 Ga0453684_0000313 3300044712 Bacteria 205836
186 Ga0453684_0034076 3300044712 Bacteria 7079
187 Ga0453684_0310663 3300044712 Unclassified 1789
188 Ga0466971_0010442 3300044719 Bacteria 4058
189 Ga0466957_0523807 3300044842 Bacteria 824
190 Ga0451576_0793611 3300045051 Bacteria 994
191 Ga0466958_0038392 3300045836 Bacteria 2873
192 Ga0466967_0017977 3300045976 Bacteria 5636
193 Ga0466967_0036123 3300045976 Bacteria 4215
194 Ga0466967_0041789 3300045976 Bacteria 3957
195 Ga0466967_0095403 3300045976 Bacteria 2711
196 Ga0495664_0532437 3300046477 Bacteria 701
197 Ga0495606_0174396 3300046507 Bacteria 1245
198 Ga0495610_0003006 3300046512 Bacteria 13537
199 Ga0495628_0214902 3300046516 Bacteria 1445
200 Ga0495652_0042724 3300046529 Bacteria 3908
201 Ga0495652_0166915 3300046529 Bacteria 1703
202 Ga0495587_0128396 3300046536 Bacteria 1450
203 Ga0495621_0016361 3300046539 Bacteria 2379
204 Ga0495645_0010332 3300046543 Bacteria 6543
205 Ga0495645_0511569 3300046543 Bacteria 749
206 Ga0495611_0000338 3300046648 Bacteria 30531
207 Ga0495588_0070195 3300046674 Bacteria 1821
208 Ga0495599_0042689 3300046678 Bacteria 2846
209 Ga0495669_0563913 3300046684 Bacteria 554
210 Ga0495670_0554950 3300046691 Bacteria 625
211 Ga0495636_0328707 3300047318 Bacteria 719
212 Ga0495675_0133069 3300047444 Bacteria 1545
213 Ga0495686_0000023 3300047472 Bacteria 400457
214 Ga0495686_0166415 3300047472 Bacteria 1285
215 Ga0495686_0546011 3300047472 Bacteria 605
216 Ga0496103_0375187 3300048906 Bacteria 914
217 Ga0496104_0271943 3300048907 Bacteria 1607
218 Ga0496105_0855115 3300048908 Bacteria 688
219 Ga0496109_0091150 3300048912 Bacteria 2819
220 Ga0496110_1667908 3300048913 Bacteria 547
221 Ga0496112_0202561 3300048915 Bacteria 1943
222 Ga0496112_0211198 3300048915 Bacteria 1898
223 Ga0496113_0486956 3300048916 Bacteria 991
224 Ga0496115_0144944 3300048918 Bacteria 1960
225 Ga0496115_0400427 3300048918 Bacteria 1114
226 Ga0496126_0000406 3300048929 Bacteria 87599
227 Ga0495678_001042 3300049459 Bacteria 23497
228 Ga0495682_0000834 3300049460 Bacteria 19318
229 Ga0501033_0000036 3300049570 Bacteria 148612
230 Ga0501033_0721794 3300049570 Bacteria 677
231 Ga0501042_0346942 3300049578 Bacteria 1074
232 Ga0501047_0496630 3300049581 Bacteria 1047
233 Ga0501070_0161340 3300049586 Bacteria 1848
234 Ga0501070_0948604 3300049586 Bacteria 669
235 nmdc:mga03683_230056_c1 3300050489 Bacteria 857
236 nmdc:mga03n38_59917_c1 3300050490 Bacteria 1729
237 nmdc:mga00v17_198317_c1 3300050491 Bacteria 1297
238 nmdc:mga00v17_637053_c1 3300050491 Bacteria 686
239 nmdc:mga0yw44_489871_c1 3300050492 Bacteria 834
240 nmdc:mga06z11_12745_c1 3300050494 Bacteria 3666
241 nmdc:mga06z11_15089_c1 3300050494 Bacteria 3439
242 nmdc:mga06z11_151872_c1 3300050494 Bacteria 1317
243 nmdc:mga04h51_254136_c1 3300050495 Bacteria 705
244 nmdc:mga07m45_223751_c1 3300050496 Bacteria 1095
245 nmdc:mga0n895_662985_c1 3300050512 Bacteria 1041
246 nmdc:mga0rr50_1710289_c1 3300050513 Bacteria 530
247 Ga0500578_0000041 3300053086 Bacteria 129580
248 Ga0500643_001223 3300053087 Bacteria 15308
249 Ga0500594_0000926 3300053118 Bacteria 6298
250 Ga0500595_023549 3300053119 Bacteria 2162
251 Ga0500588_0052710 3300053146 Bacteria 1275
252 Ga0501084_0000074 3300054114 Bacteria 72522
253 Ga0501084_1523258 3300054114 Bacteria 559
254 Ga0501082_0133928 3300060353 Bacteria 2150
255 Ga0466962_0030434 3300061719 Bacteria 2585

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300030760 Ga0265762_1033677 Ga0265762_10336771 149
2 3300030878 Ga0265770_1024458 Ga0265770_10244581 149
3 3300048906 Ga0496103_0375187 Ga0496103_0375187_300_752 149
4 3300048907 Ga0496104_0271943 Ga0496104_0271943_591_1043 149
5 3300048912 Ga0496109_0091150 Ga0496109_0091150_551_1003 149
6 3300048913 Ga0496110_1667908 Ga0496110_1667908_32_484 149
7 3300048918 Ga0496115_0144944 Ga0496115_0144944_177_629 149
8 3300005329 Ga0070683_100140864 Ga0070683_1001408642 151
9 3300005335 Ga0070666_10850287 Ga0070666_108502871 151
10 3300005355 Ga0070671_100042626 Ga0070671_1000426265 151
11 3300005518 Ga0070699_100038331 Ga0070699_1000383312 151
12 3300005536 Ga0070697_100425079 Ga0070697_1004250791 151
13 3300005548 Ga0070665_100000745 Ga0070665_10000074527 151
14 3300009176 Ga0105242_10281026 Ga0105242_102810262 151
15 3300013104 Ga0157370_10402138 Ga0157370_104021381 151
16 3300026041 Ga0207639_10110670 Ga0207639_101106703 151
17 3300028379 Ga0268266_10000840 Ga0268266_100008403 151
18 3300031240 Ga0265320_10000555 Ga0265320_100005559 151
19 3300031507 Ga0307509_10080603 Ga0307509_100806034 151
20 3300031711 Ga0265314_10068642 Ga0265314_100686422 151
21 3300037312 Ga0395899_0327269 Ga0395899_0327269_321_782 151
22 3300037418 Ga0395900_0017364 Ga0395900_0017364_4497_4958 151
23 3300037418 Ga0395900_0021812 Ga0395900_0021812_2342_2800 151
24 3300037466 Ga0395898_0080467 Ga0395898_0080467_1096_1557 151
25 3300042876 Ga0451577_0381036 Ga0451577_0381036_259_714 151
26 3300044712 Ga0453684_0000313 Ga0453684_0000313_72267_72722 151
27 3300044842 Ga0466957_0523807 Ga0466957_0523807_256_717 151
28 3300045976 Ga0466967_0036123 Ga0466967_0036123_530_991 151
29 3300046648 Ga0495611_0000338 Ga0495611_0000338_5763_6218 151
30 3300047472 Ga0495686_0166415 Ga0495686_0166415_340_801 151
31 3300048916 Ga0496113_0486956 Ga0496113_0486956_407_874 151
32 3300049570 Ga0501033_0000036 Ga0501033_0000036_36823_37278 151
33 3300003322 rootL2_10378192 rootL2_103781922 152
34 3300005548 Ga0070665_100640377 Ga0070665_1006403772 152
35 3300006038 Ga0075365_10002052 Ga0075365_100020529 152
36 3300006038 Ga0075365_10116851 Ga0075365_101168512 152
37 3300006042 Ga0075368_10248203 Ga0075368_102482032 152
38 3300006048 Ga0075363_100027592 Ga0075363_1000275922 152
39 3300006177 Ga0075362_10263856 Ga0075362_102638562 152
40 3300006178 Ga0075367_10372526 Ga0075367_103725262 152
41 3300006353 Ga0075370_10196350 Ga0075370_101963502 152
42 3300006844 Ga0075428_100544172 Ga0075428_1005441722 152
43 3300026116 Ga0207674_10514756 Ga0207674_105147562 152
44 3300028379 Ga0268266_10988434 Ga0268266_109884342 152
45 3300028577 Ga0265318_10013228 Ga0265318_100132283 152
46 3300031235 Ga0265330_10389292 Ga0265330_103892921 152
47 3300031241 Ga0265325_10037140 Ga0265325_100371403 152
48 3300031242 Ga0265329_10129226 Ga0265329_101292261 152
49 3300031250 Ga0265331_10075107 Ga0265331_100751072 152
50 3300031548 Ga0307408_100044392 Ga0307408_1000443921 152
51 3300031595 Ga0265313_10001440 Ga0265313_1000144016 152
52 3300031595 Ga0265313_10001587 Ga0265313_100015876 152
53 3300031711 Ga0265314_10019435 Ga0265314_100194353 152
54 3300031911 Ga0307412_10094493 Ga0307412_100944932 152
55 3300032002 Ga0307416_100160790 Ga0307416_1001607902 152
56 3300037312 Ga0395899_0076466 Ga0395899_0076466_644_1114 152
57 3300037471 Ga0395905_0196539 Ga0395905_0196539_594_1061 152
58 3300041411 Ga0439466_0154549 Ga0439466_0154549_224_682 152
59 3300041413 Ga0439465_0017419 Ga0439465_0017419_494_952 152
60 3300041458 Ga0451798_0491710 Ga0451798_0491710_25_495 152
61 3300042435 Ga0439434_0096305 Ga0439434_0096305_300_758 152
62 3300042876 Ga0451577_0002241 Ga0451577_0002241_12702_13160 152
63 3300044712 Ga0453684_0034076 Ga0453684_0034076_122_580 152
64 3300044712 Ga0453684_0310663 Ga0453684_0310663_23_484 152
65 3300045051 Ga0451576_0793611 Ga0451576_0793611_149_607 152
66 3300045976 Ga0466967_0095403 Ga0466967_0095403_2009_2488 152
67 3300046674 Ga0495588_0070195 Ga0495588_0070195_463_939 152
68 3300047318 Ga0495636_0328707 Ga0495636_0328707_213_671 152
69 3300047472 Ga0495686_0000023 Ga0495686_0000023_173913_174371 152
70 3300048908 Ga0496105_0855115 Ga0496105_0855115_31_522 152
71 3300048915 Ga0496112_0202561 Ga0496112_0202561_189_680 152
72 3300048915 Ga0496112_0211198 Ga0496112_0211198_1022_1513 152
73 3300050489 nmdc:mga03683_230056_c1 nmdc:mga03683_230056_c1_238_696 152
74 3300050490 nmdc:mga03n38_59917_c1 nmdc:mga03n38_59917_c1_940_1398 152
75 3300050491 nmdc:mga00v17_637053_c1 nmdc:mga00v17_637053_c1_14_472 152
76 3300050494 nmdc:mga06z11_12745_c1 nmdc:mga06z11_12745_c1_965_1423 152
77 3300050494 nmdc:mga06z11_151872_c1 nmdc:mga06z11_151872_c1_382_840 152
78 3300050495 nmdc:mga04h51_254136_c1 nmdc:mga04h51_254136_c1_38_496 152
79 3300050496 nmdc:mga07m45_223751_c1 nmdc:mga07m45_223751_c1_318_776 152
80 3300005445 Ga0070708_100548521 Ga0070708_1005485211 153
81 3300005445 Ga0070708_101177127 Ga0070708_1011771271 153
82 3300005466 Ga0070685_10024858 Ga0070685_100248585 153
83 3300005468 Ga0070707_100273462 Ga0070707_1002734622 153
84 3300005518 Ga0070699_100193236 Ga0070699_1001932362 153
85 3300005536 Ga0070697_100002730 Ga0070697_1000027301 153
86 3300005547 Ga0070693_100092372 Ga0070693_1000923724 153
87 3300005841 Ga0068863_100159296 Ga0068863_1001592963 153
88 3300025304 Ga0209257_1007325 Ga0209257_10073254 153
89 3300025922 Ga0207646_10430210 Ga0207646_104302101 153
90 3300028556 Ga0265337_1006386 Ga0265337_10063862 153
91 3300028577 Ga0265318_10000025 Ga0265318_10000025136 153
92 3300031711 Ga0265314_10638576 Ga0265314_106385761 153
93 3300037471 Ga0395905_0775913 Ga0395905_0775913_307_777 153
94 3300046512 Ga0495610_0003006 Ga0495610_0003006_9235_9696 153
95 3300046684 Ga0495669_0563913 Ga0495669_0563913_26_496 153
96 3300046691 Ga0495670_0554950 Ga0495670_0554950_52_522 153
97 3300047472 Ga0495686_0546011 Ga0495686_0546011_74_535 153
98 3300048918 Ga0496115_0400427 Ga0496115_0400427_525_986 153
99 3300049459 Ga0495678_001042 Ga0495678_001042_10601_11062 153
100 3300053086 Ga0500578_0000041 Ga0500578_0000041_20503_20964 153
101 3300053118 Ga0500594_0000926 Ga0500594_0000926_5204_5665 153
102 3300053146 Ga0500588_0052710 Ga0500588_0052710_547_1008 153
103 3300054114 Ga0501084_1523258 Ga0501084_1523258_22_492 153
104 3300003323 rootH1_10209300 rootH1_102093002 154
105 3300005327 Ga0070658_10363267 Ga0070658_103632672 154
106 3300005335 Ga0070666_10000406 Ga0070666_100004064 154
107 3300005344 Ga0070661_100935285 Ga0070661_1009352851 154
108 3300005367 Ga0070667_100028682 Ga0070667_1000286825 154
109 3300005435 Ga0070714_100055448 Ga0070714_1000554483 154
110 3300005435 Ga0070714_101338901 Ga0070714_1013389011 154
111 3300005439 Ga0070711_100242168 Ga0070711_1002421682 154
112 3300005444 Ga0070694_100215170 Ga0070694_1002151702 154
113 3300005539 Ga0068853_100009726 Ga0068853_1000097267 154
114 3300005548 Ga0070665_100426114 Ga0070665_1004261142 154
115 3300005577 Ga0068857_100731990 Ga0068857_1007319902 154
116 3300005614 Ga0068856_100091526 Ga0068856_1000915262 154
117 3300005616 Ga0068852_100051138 Ga0068852_1000511382 154
118 3300005616 Ga0068852_100669331 Ga0068852_1006693312 154
119 3300006237 Ga0097621_100045070 Ga0097621_1000450706 154
120 3300006237 Ga0097621_100304882 Ga0097621_1003048822 154
121 3300006358 Ga0068871_100052852 Ga0068871_1000528526 154
122 3300006358 Ga0068871_100398948 Ga0068871_1003989482 154
123 3300006871 Ga0075434_100268269 Ga0075434_1002682693 154
124 3300009093 Ga0105240_10000582 Ga0105240_1000058245 154
125 3300009148 Ga0105243_10255266 Ga0105243_102552662 154
126 3300009174 Ga0105241_10145185 Ga0105241_101451852 154
127 3300009177 Ga0105248_10059804 Ga0105248_100598045 154
128 3300009177 Ga0105248_10308379 Ga0105248_103083792 154
129 3300009545 Ga0105237_10059698 Ga0105237_100596984 154
130 3300009551 Ga0105238_10030822 Ga0105238_100308222 154
131 3300009551 Ga0105238_10154721 Ga0105238_101547214 154
132 3300009551 Ga0105238_11718471 Ga0105238_117184711 154
133 3300010375 Ga0105239_10464123 Ga0105239_104641232 154
134 3300010375 Ga0105239_10637675 Ga0105239_106376752 154
135 3300013100 Ga0157373_10001657 Ga0157373_1000165715 154
136 3300013105 Ga0157369_10002775 Ga0157369_100027755 154
137 3300013105 Ga0157369_10134667 Ga0157369_101346674 154
138 3300013297 Ga0157378_10089093 Ga0157378_100890933 154
139 3300025911 Ga0207654_10620539 Ga0207654_106205391 154
140 3300025913 Ga0207695_10000004 Ga0207695_10000004147 154
141 3300025914 Ga0207671_10500444 Ga0207671_105004441 154
142 3300025920 Ga0207649_10118440 Ga0207649_101184402 154
143 3300025924 Ga0207694_10000015 Ga0207694_10000015218 154
144 3300025924 Ga0207694_10103396 Ga0207694_101033961 154
145 3300025929 Ga0207664_10041486 Ga0207664_100414864 154
146 3300025935 Ga0207709_10214968 Ga0207709_102149682 154
147 3300025941 Ga0207711_10092123 Ga0207711_100921232 154
148 3300025949 Ga0207667_10000226 Ga0207667_1000022636 154
149 3300025981 Ga0207640_10737160 Ga0207640_107371601 154
150 3300026035 Ga0207703_10847394 Ga0207703_108473941 154
151 3300026041 Ga0207639_10039057 Ga0207639_100390575 154
152 3300026078 Ga0207702_10277927 Ga0207702_102779272 154
153 3300026089 Ga0207648_10313394 Ga0207648_103133942 154
154 3300031548 Ga0307408_100384254 Ga0307408_1003842543 154
155 3300031730 Ga0307516_10045835 Ga0307516_100458354 154
156 3300032002 Ga0307416_100706332 Ga0307416_1007063322 154
157 3300032004 Ga0307414_10571740 Ga0307414_105717402 154
158 3300036401 Ga0373937_1532535 Ga0373937_1532535_34_510 154
159 3300039437 Ga0436365_1846728 Ga0436365_1846728_170_634 154
160 3300044683 Ga0466965_0508399 Ga0466965_0508399_111_611 154
161 3300044693 Ga0466961_0132787 Ga0466961_0132787_869_1369 154
162 3300044694 Ga0466963_0003213 Ga0466963_0003213_1190_1690 154
163 3300044719 Ga0466971_0010442 Ga0466971_0010442_2854_3354 154
164 3300045836 Ga0466958_0038392 Ga0466958_0038392_1997_2497 154
165 3300045976 Ga0466967_0017977 Ga0466967_0017977_422_922 154
166 3300046477 Ga0495664_0532437 Ga0495664_0532437_172_648 154
167 3300046507 Ga0495606_0174396 Ga0495606_0174396_253_717 154
168 3300046529 Ga0495652_0042724 Ga0495652_0042724_1035_1511 154
169 3300046536 Ga0495587_0128396 Ga0495587_0128396_857_1333 154
170 3300046539 Ga0495621_0016361 Ga0495621_0016361_73_537 154
171 3300049460 Ga0495682_0000834 Ga0495682_0000834_12840_13334 154
172 3300049586 Ga0501070_0161340 Ga0501070_0161340_431_895 154
173 3300050492 nmdc:mga0yw44_489871_c1 nmdc:mga0yw44_489871_c1_29_493 154
174 3300050512 nmdc:mga0n895_662985_c1 nmdc:mga0n895_662985_c1_206_676 154
175 3300050513 nmdc:mga0rr50_1710289_c1 nmdc:mga0rr50_1710289_c1_25_495 154
176 3300053087 Ga0500643_001223 Ga0500643_001223_9212_9679 154
177 3300053119 Ga0500595_023549 Ga0500595_023549_200_664 154
178 3300061719 Ga0466962_0030434 Ga0466962_0030434_1591_2091 154
179 3300003320 rootH2_10010300 rootH2_1001030052 155
180 3300005327 Ga0070658_10723295 Ga0070658_107232952 155
181 3300005329 Ga0070683_100211990 Ga0070683_1002119902 155
182 3300005335 Ga0070666_10135287 Ga0070666_101352872 155
183 3300005339 Ga0070660_100022070 Ga0070660_1000220705 155
184 3300005364 Ga0070673_100019526 Ga0070673_1000195261 155
185 3300005366 Ga0070659_100376668 Ga0070659_1003766681 155
186 3300005455 Ga0070663_100210021 Ga0070663_1002100213 155
187 3300005539 Ga0068853_100187460 Ga0068853_1001874601 155
188 3300005563 Ga0068855_100014236 Ga0068855_1000142366 155
189 3300005563 Ga0068855_100533430 Ga0068855_1005334302 155
190 3300006042 Ga0075368_10032708 Ga0075368_100327083 155
191 3300006051 Ga0075364_10226238 Ga0075364_102262381 155
192 3300006178 Ga0075367_10045088 Ga0075367_100450883 155
193 3300009093 Ga0105240_10160493 Ga0105240_101604932 155
194 3300013104 Ga0157370_10152927 Ga0157370_101529273 155
195 3300013307 Ga0157372_10255173 Ga0157372_102551733 155
196 3300021358 Ga0213873_10063663 Ga0213873_100636632 155
197 3300021384 Ga0213876_10225028 Ga0213876_102250282 155
198 3300024225 Ga0224572_1037272 Ga0224572_10372721 155
199 3300025903 Ga0207680_10067029 Ga0207680_100670292 155
200 3300025909 Ga0207705_10000611 Ga0207705_1000061121 155
201 3300025912 Ga0207707_10001384 Ga0207707_1000138420 155
202 3300025913 Ga0207695_10143551 Ga0207695_101435512 155
203 3300025913 Ga0207695_10653615 Ga0207695_106536152 155
204 3300025917 Ga0207660_10039888 Ga0207660_100398882 155
205 3300025919 Ga0207657_10000815 Ga0207657_1000081530 155
206 3300025920 Ga0207649_10008298 Ga0207649_100082986 155
207 3300025921 Ga0207652_10011860 Ga0207652_100118603 155
208 3300025931 Ga0207644_10445414 Ga0207644_104454142 155
209 3300025931 Ga0207644_10474292 Ga0207644_104742921 155
210 3300025932 Ga0207690_10069994 Ga0207690_100699943 155
211 3300025944 Ga0207661_10411539 Ga0207661_104115392 155
212 3300026067 Ga0207678_10106388 Ga0207678_101063883 155
213 3300026078 Ga0207702_11075417 Ga0207702_110754172 155
214 3300028800 Ga0265338_10007026 Ga0265338_100070269 155
215 3300031235 Ga0265330_10269441 Ga0265330_102694411 155
216 3300031240 Ga0265320_10000209 Ga0265320_1000020935 155
217 3300031241 Ga0265325_10009122 Ga0265325_100091223 155
218 3300031241 Ga0265325_10052885 Ga0265325_100528851 155
219 3300031241 Ga0265325_10318437 Ga0265325_103184371 155
220 3300031241 Ga0265325_10343034 Ga0265325_103430341 155
221 3300031241 Ga0265325_10378784 Ga0265325_103787841 155
222 3300031247 Ga0265340_10000052 Ga0265340_1000005220 155
223 3300031247 Ga0265340_10000319 Ga0265340_1000031913 155
224 3300031249 Ga0265339_10186632 Ga0265339_101866321 155
225 3300031249 Ga0265339_10226703 Ga0265339_102267031 155
226 3300031250 Ga0265331_10000037 Ga0265331_10000037131 155
227 3300031250 Ga0265331_10002194 Ga0265331_100021948 155
228 3300031251 Ga0265327_10000757 Ga0265327_1000075727 155
229 3300031251 Ga0265327_10001069 Ga0265327_1000106920 155
230 3300031344 Ga0265316_10012567 Ga0265316_100125676 155
231 3300031344 Ga0265316_10443953 Ga0265316_104439532 155
232 3300031711 Ga0265314_10020215 Ga0265314_100202157 155
233 3300031711 Ga0265314_10032713 Ga0265314_100327134 155
234 3300031711 Ga0265314_10044900 Ga0265314_100449003 155
235 3300031711 Ga0265314_10115108 Ga0265314_101151082 155
236 3300031711 Ga0265314_10218344 Ga0265314_102183442 155
237 3300039437 Ga0436365_1358812 Ga0436365_1358812_222_689 155
238 3300039437 Ga0436365_1797404 Ga0436365_1797404_50710_51201 155
239 3300039450 Ga0436363_1262137 Ga0436363_1262137_1674_2141 155
240 3300045976 Ga0466967_0041789 Ga0466967_0041789_2845_3324 155
241 3300046516 Ga0495628_0214902 Ga0495628_0214902_893_1396 155
242 3300046529 Ga0495652_0166915 Ga0495652_0166915_112_615 155
243 3300046543 Ga0495645_0010332 Ga0495645_0010332_4759_5262 155
244 3300046543 Ga0495645_0511569 Ga0495645_0511569_27_590 155
245 3300046678 Ga0495599_0042689 Ga0495599_0042689_17_520 155
246 3300047444 Ga0495675_0133069 Ga0495675_0133069_80_583 155
247 3300048929 Ga0496126_0000406 Ga0496126_0000406_30809_31279 155
248 3300049570 Ga0501033_0721794 Ga0501033_0721794_152_619 155
249 3300049578 Ga0501042_0346942 Ga0501042_0346942_240_707 155
250 3300049581 Ga0501047_0496630 Ga0501047_0496630_477_947 155
251 3300049586 Ga0501070_0948604 Ga0501070_0948604_70_582 155
252 3300050491 nmdc:mga00v17_198317_c1 nmdc:mga00v17_198317_c1_122_592 155
253 3300050494 nmdc:mga06z11_15089_c1 nmdc:mga06z11_15089_c1_2836_3306 155
254 3300054114 Ga0501084_0000074 Ga0501084_0000074_43226_43738 155
255 3300060353 Ga0501082_0133928 Ga0501082_0133928_1433_1945 155

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01980

TrmO

tRNA-methyltransferase O

52

167

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7btu-assembly1.cif.gz_A crystal structure of trmo from p. areuginosa 0.8509 1 146
7btz-assembly1.cif.gz_A crystal structure of trmo 0.85 1 145
2nv4-assembly1.cif.gz_B crystal structure of upf0066 protein af0241 in complex with s-adenosylmethionine. northeast structural genomics consortium target gr27 0.8487 5 140
7bu1-assembly1.cif.gz_B crystal structure of trmo from pseudomonas aeruginosa 0.8444 3 141
2nv4-assembly1.cif.gz_B crystal structure of upf0066 protein af0241 in complex with s-adenosylmethionine. northeast structural genomics consortium target gr27 0.8429 5 140
ID Description Score Start End Superfamily
af_P28634_1_140_2.40.30.70 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;YaeB-like 0.8851 3 132 2.40.30.70
af_Q6NMB4_59_230_2.40.30.70 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;YaeB-like 0.8832 1 132 2.40.30.70
af_Q54CD3_97_243_2.40.30.70 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;YaeB-like 0.8725 9 139 2.40.30.70
af_Q9BU70_29_181_2.40.30.70 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;YaeB-like 0.8612 6 145 2.40.30.70
af_A1Z759_99_248_2.40.30.70 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;YaeB-like 0.8418 6 145 2.40.30.70
ID Description Score Start End GO Terms
AF-A0A1M3ADH7-F1-model_v4 deleted 0.9893 3 155
AF-A0A6I1ZDX3-F1-model_v4 TsaA-like domain-containing protein 0.9842 3 155
AF-A0A810LN61-F1-model_v4 deleted 0.9833 1 155
AF-A0A1Y6CTF8-F1-model_v4 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 0.9831 3 154 GO:0008168
GO:0032259
AF-C7Q1X8-F1-model_v4 TsaA-like domain-containing protein 0.982 4 155

Feature Viewer

pLDDT pTM Quality
94.38 0.88 High
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Predicted Structure (AlphaFold2)

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