F365821

General Info

Members Datasets Scaffolds Average Seq Length
255 151 510 452

Family's Representative Sequence

Representative Sequence 3300031901|Ga0307406_10078516|Ga0307406_100785162
Length 501
Sequence LSSPVERSEKALHHNLTLIVIGGLSVLQTLRARTSRRPYIFTVEISGRKTLVLGAGKSGIASAKFLAERGAVVALHDKREVESWSDEAKSLKERFGVGLIDGNLPSWLLDQIDLVVISPGVPTNTIPARYVDRKDGEVIGEVELAYRFLKGRIVGITGSNGKTTTTTLIGELLRNSGIETQVGGNIGTPLLSLSETATENTWTVAELSSFQLETIRDFRPNVAVATNVTPNHMDRYDFFSDYAAAKHRLFMNQRSEDVAILNADDPTTASWANGLKAHVTMFSVKKELDEGLFLRGRDLISRANGKEKVLTTRDEIFVRGMHNVENVLAAFAAGLACGASPDSMRETVREFKGVEHRIEFVSEIEDVKFYNDSKATSVDASLKALEALSEEAGKTVLILGGRGKNAPYEKIVRKLVLIGEDADNIESQLKNHAEIVRAGSMADAVRKSFEAAEKGDSVLLAPACASFDMFKSFEERGTVFKEEVLKLTERNLAADTRGFRG

Samples

Sample ID Description Type Environment
1 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
127 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
128 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
143 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
144 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.78
Nodule 0
Rhizoplane 0.78
Rhizosphere 91.76
Stem 0
Stem Tuber 0
Unclassified 7.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307406_10078516 3300031901 Bacteria 2187
2 LJQas_1000322 3300000549 Bacteria 8400
3 Ga0065712_10077769 3300005290 Bacteria 3444
4 Ga0065715_10035216 3300005293 Unclassified 1768
5 Ga0070658_10005084 3300005327 Bacteria 10703
6 Ga0070690_100011165 3300005330 Bacteria 5248
7 Ga0070670_100016513 3300005331 Bacteria 6337
8 Ga0070670_100106248 3300005331 Bacteria 2419
9 Ga0070670_100145129 3300005331 Bacteria 2053
10 Ga0070670_100263752 3300005331 Bacteria 1502
11 Ga0068869_100040576 3300005334 Bacteria 3329
12 Ga0068869_100045633 3300005334 Bacteria 3156
13 Ga0068869_100072820 3300005334 Unclassified 2546
14 Ga0070666_10020184 3300005335 Bacteria 4306
15 Ga0068868_100034841 3300005338 Bacteria 3888
16 Ga0070689_100036954 3300005340 Bacteria 3736
17 Ga0070687_100037010 3300005343 Bacteria 2436
18 Ga0070661_100071618 3300005344 Bacteria 2551
19 Ga0070675_100000804 3300005354 Bacteria 22072
20 Ga0070675_100001520 3300005354 Bacteria 17151
21 Ga0070675_100003753 3300005354 Bacteria 11535
22 Ga0070675_100009365 3300005354 Bacteria 7618
23 Ga0070675_100031773 3300005354 Bacteria 4269
24 Ga0070675_100111335 3300005354 Bacteria 2317
25 Ga0070671_100017835 3300005355 Bacteria 5754
26 Ga0070671_100027707 3300005355 Bacteria 4665
27 Ga0070673_100009633 3300005364 Bacteria 6496
28 Ga0070659_100042240 3300005366 Bacteria 3565
29 Ga0070667_100004169 3300005367 Bacteria 12213
30 Ga0070667_100061131 3300005367 Bacteria 3189
31 Ga0070703_10000361 3300005406 Bacteria 19652
32 Ga0070701_10058045 3300005438 Unclassified 2030
33 Ga0070711_100000035 3300005439 Bacteria 88475
34 Ga0070681_10105777 3300005458 Unclassified 2756
35 Ga0068867_100094877 3300005459 Unclassified 2269
36 Ga0070685_10048914 3300005466 Bacteria 2437
37 Ga0070685_10054651 3300005466 Bacteria 2317
38 Ga0070679_100074331 3300005530 Bacteria 3389
39 Ga0068853_100020037 3300005539 Bacteria 5558
40 Ga0070672_100082086 3300005543 Unclassified 2586
41 Ga0070672_100120597 3300005543 Bacteria 2146
42 Ga0070686_100007786 3300005544 Bacteria 5986
43 Ga0070696_100006775 3300005546 Bacteria 7649
44 Ga0070665_100203122 3300005548 Bacteria 1982
45 Ga0070665_100216955 3300005548 Bacteria 1914
46 Ga0070664_100004318 3300005564 Bacteria 11426
47 Ga0068854_100100822 3300005578 Bacteria 2165
48 Ga0068856_100090357 3300005614 Bacteria 3046
49 Ga0068859_100000581 3300005617 Bacteria 36448
50 Ga0068859_100015448 3300005617 Bacteria 7670
51 Ga0068859_100022748 3300005617 Bacteria 6285
52 Ga0068864_100003312 3300005618 Bacteria 13309
53 Ga0068864_100012497 3300005618 Bacteria 7021
54 Ga0068864_100126057 3300005618 Bacteria 2295
55 Ga0068870_10062991 3300005840 Bacteria 1999
56 Ga0068863_100002577 3300005841 Bacteria 17972
57 Ga0068863_100014915 3300005841 Bacteria 7462
58 Ga0068863_100042046 3300005841 Bacteria 4344
59 Ga0068863_100114473 3300005841 Unclassified 2569
60 Ga0068858_100012333 3300005842 Bacteria 8058
61 Ga0068858_100127212 3300005842 Bacteria 2387
62 Ga0068860_100001970 3300005843 Bacteria 21702
63 Ga0068860_100016088 3300005843 Bacteria 7297
64 Ga0068860_100200320 3300005843 Bacteria 1934
65 Ga0068862_100025273 3300005844 Bacteria 4986
66 Ga0068862_100108907 3300005844 Bacteria 2430
67 Ga0081539_10002022 3300005985 Bacteria 30589
68 Ga0070715_10000039 3300006163 Bacteria 66918
69 Ga0070716_100000014 3300006173 Bacteria 92762
70 Ga0097621_100008451 3300006237 Bacteria 7416
71 Ga0097621_100011178 3300006237 Bacteria 6607
72 Ga0097621_100062863 3300006237 Viruses 3049
73 Ga0097621_100163000 3300006237 Unclassified 1917
74 Ga0068871_100004387 3300006358 Bacteria 9807
75 Ga0068871_100066503 3300006358 Bacteria 2955
76 Ga0068871_100156896 3300006358 Bacteria 1944
77 Ga0075434_100133518 3300006871 Bacteria 2502
78 Ga0068865_100021817 3300006881 Bacteria 4169
79 Ga0075436_100000747 3300006914 Bacteria 21515
80 Ga0097620_100000581 3300006931 Bacteria 36448
81 Ga0097620_100015448 3300006931 Bacteria 7670
82 Ga0097620_100022748 3300006931 Bacteria 6285
83 Ga0105240_10122849 3300009093 Bacteria 3124
84 Ga0111539_10012290 3300009094 Bacteria 10732
85 Ga0111539_10023482 3300009094 Bacteria 7576
86 Ga0111539_10059778 3300009094 Bacteria 4518
87 Ga0111539_10371646 3300009094 Bacteria 1664
88 Ga0105247_10080267 3300009101 Bacteria 2054
89 Ga0105241_10033134 3300009174 Bacteria 3877
90 Ga0105242_10011040 3300009176 Bacteria 6939
91 Ga0105242_10085365 3300009176 Bacteria 2647
92 Ga0105248_10000381 3300009177 Bacteria 51763
93 Ga0105248_10025269 3300009177 Bacteria 6604
94 Ga0157369_10024146 3300013105 Bacteria 6766
95 Ga0157369_10117967 3300013105 Unclassified 2817
96 Ga0157374_10010363 3300013296 Bacteria 8018
97 Ga0157374_10057460 3300013296 Bacteria 3634
98 Ga0157378_10003138 3300013297 Bacteria 14688
99 Ga0157378_10004774 3300013297 Bacteria 11873
100 Ga0157378_10025138 3300013297 Bacteria 5247
101 Ga0157378_10032409 3300013297 Bacteria 4618
102 Ga0163162_10002421 3300013306 Bacteria 17570
103 Ga0163162_10005311 3300013306 Bacteria 12435
104 Ga0163162_10012891 3300013306 Bacteria 8163
105 Ga0163162_10154141 3300013306 Unclassified 2417
106 Ga0157372_10023816 3300013307 Bacteria 6642
107 Ga0157372_10026746 3300013307 Bacteria 6279
108 Ga0157372_10028412 3300013307 Bacteria 6102
109 Ga0157372_10071478 3300013307 Unclassified 3907
110 Ga0157372_10128395 3300013307 Bacteria 2915
111 Ga0157375_10000440 3300013308 Bacteria 37608
112 Ga0157375_10002713 3300013308 Bacteria 15310
113 Ga0157375_10228676 3300013308 Unclassified 2019
114 Ga0157375_10243328 3300013308 Bacteria 1959
115 Ga0163163_10008738 3300014325 Bacteria 9015
116 Ga0163163_10030496 3300014325 Bacteria 5196
117 Ga0163163_10165651 3300014325 Bacteria 2256
118 Ga0163163_10375312 3300014325 Bacteria 1479
119 Ga0157380_10089289 3300014326 Bacteria 2538
120 Ga0157380_10214292 3300014326 Bacteria 1718
121 Ga0157377_10099971 3300014745 Bacteria 1726
122 Ga0157379_10000263 3300014968 Bacteria 41237
123 Ga0157376_10010683 3300014969 Bacteria 6731
124 Ga0157376_10051747 3300014969 Bacteria 3412
125 Ga0163161_10000899 3300017792 Bacteria 23098
126 Ga0163161_10013657 3300017792 Bacteria 5655
127 Ga0213876_10014131 3300021384 Bacteria 4234
128 Ga0207710_10031238 3300025900 Bacteria 2328
129 Ga0207680_10018148 3300025903 Bacteria 3733
130 Ga0207680_10125792 3300025903 Bacteria 1683
131 Ga0207685_10000024 3300025905 Bacteria 113741
132 Ga0207705_10031862 3300025909 Bacteria 3766
133 Ga0207707_10025004 3300025912 Bacteria 5226
134 Ga0207663_10000037 3300025916 Bacteria 85962
135 Ga0207662_10012425 3300025918 Bacteria 4742
136 Ga0207650_10010436 3300025925 Bacteria 6366
137 Ga0207650_10014143 3300025925 Bacteria 5543
138 Ga0207650_10089327 3300025925 Bacteria 2351
139 Ga0207650_10090004 3300025925 Bacteria 2343
140 Ga0207659_10000432 3300025926 Bacteria 25126
141 Ga0207659_10003603 3300025926 Bacteria 9323
142 Ga0207659_10004454 3300025926 Bacteria 8479
143 Ga0207659_10009724 3300025926 Bacteria 6014
144 Ga0207690_10069596 3300025932 Bacteria 2422
145 Ga0207686_10106738 3300025934 Bacteria 1880
146 Ga0207709_10012951 3300025935 Bacteria 4599
147 Ga0207665_10000029 3300025939 Bacteria 95174
148 Ga0207691_10000304 3300025940 Bacteria 48837
149 Ga0207691_10007814 3300025940 Bacteria 10298
150 Ga0207691_10061338 3300025940 Bacteria 3416
151 Ga0207691_10187297 3300025940 Bacteria 1806
152 Ga0207711_10002621 3300025941 Bacteria 15941
153 Ga0207711_10004330 3300025941 Bacteria 12121
154 Ga0207711_10006063 3300025941 Bacteria 10215
155 Ga0207689_10026231 3300025942 Bacteria 4879
156 Ga0207667_10188659 3300025949 Bacteria 2115
157 Ga0207651_10019038 3300025960 Bacteria 4104
158 Ga0207651_10115088 3300025960 Bacteria 2027
159 Ga0207712_10123450 3300025961 Bacteria 1963
160 Ga0207658_10045574 3300025986 Bacteria 3197
161 Ga0207677_10001502 3300026023 Bacteria 12319
162 Ga0207639_10005145 3300026041 Bacteria 8816
163 Ga0207639_10048521 3300026041 Bacteria 3214
164 Ga0207678_10168139 3300026067 Bacteria 1872
165 Ga0207641_10001650 3300026088 Bacteria 21778
166 Ga0207641_10029064 3300026088 Bacteria 4570
167 Ga0207641_10037595 3300026088 Bacteria 4043
168 Ga0207648_10073442 3300026089 Bacteria 2981
169 Ga0207676_10002231 3300026095 Bacteria 13921
170 Ga0207676_10044995 3300026095 Unclassified 3408
171 Ga0207674_10011032 3300026116 Bacteria 10161
172 Ga0207675_100005354 3300026118 Bacteria 12316
173 Ga0268266_10147440 3300028379 Bacteria 2117
174 Ga0268265_10157543 3300028380 Bacteria 1924
175 Ga0268264_10011013 3300028381 Bacteria 7466
176 Ga0268264_10015315 3300028381 Bacteria 6289
177 Ga0268264_10060005 3300028381 Bacteria 3188
178 Ga0268264_10069822 3300028381 Bacteria 2972
179 Ga0265316_10000230 3300031344 Bacteria 64801
180 Ga0265316_10002847 3300031344 Bacteria 17701
181 Ga0265316_10024069 3300031344 Bacteria 5111
182 Ga0307513_10005293 3300031456 Bacteria 17079
183 Ga0307408_100090342 3300031548 Bacteria 2311
184 Ga0307408_100103939 3300031548 Unclassified 2169
185 Ga0307405_10004813 3300031731 Bacteria 6439
186 Ga0307405_10007212 3300031731 Bacteria 5538
187 Ga0307413_10102535 3300031824 Bacteria 1894
188 Ga0307410_10006647 3300031852 Bacteria 6259
189 Ga0307410_10023145 3300031852 Unclassified 3856
190 Ga0307410_10055901 3300031852 Bacteria 2681
191 Ga0307410_10083839 3300031852 Bacteria 2245
192 Ga0307406_10034688 3300031901 Bacteria 3097
193 Ga0307406_10042030 3300031901 Bacteria 2852
194 Ga0307407_10005942 3300031903 Bacteria 5364
195 Ga0307412_10012897 3300031911 Bacteria 4883
196 Ga0307409_100010405 3300031995 Bacteria 5783
197 Ga0307409_100011531 3300031995 Bacteria 5580
198 Ga0307409_100012652 3300031995 Bacteria 5388
199 Ga0307411_10026640 3300032005 Unclassified 3484
200 Ga0307411_10035065 3300032005 Bacteria 3128
201 Ga0307415_100000335 3300032126 Bacteria 20304
202 Ga0307415_100013524 3300032126 Bacteria 4767
203 Ga0307415_100072917 3300032126 Bacteria 2420
204 Ga0373937_0073234 3300036401 Bacteria 3160
205 Ga0436365_1351609 3300039437 Bacteria 7088
206 Ga0436365_1648350 3300039437 Bacteria 11150
207 Ga0453684_0002337 3300044712 Bacteria 46437
208 Ga0451576_0049419 3300045051 Bacteria 4413
209 Ga0495592_0004147 3300046454 Bacteria 10563
210 Ga0495608_0016364 3300046511 Bacteria 5131
211 Ga0495618_0132989 3300046514 Bacteria 1592
212 Ga0495630_0183389 3300046517 Bacteria 1596
213 Ga0495667_0001427 3300046559 Bacteria 15735
214 Ga0495668_0004924 3300046616 Bacteria 9266
215 Ga0495657_0003412 3300046675 Bacteria 12966
216 Ga0495674_0066762 3300047319 Bacteria 3119
217 Ga0496109_0203978 3300048912 Bacteria 1859
218 Ga0496114_0026603 3300048917 Unclassified 4738
219 Ga0496116_0000535 3300048919 Bacteria 51043
220 Ga0496116_0003910 3300048919 Bacteria 14514
221 Ga0496117_0000177 3300048920 Bacteria 131595
222 Ga0496119_0000019 3300048922 Bacteria 296868
223 Ga0496119_0059963 3300048922 Bacteria 2281
224 Ga0496120_0000258 3300048923 Bacteria 88695
225 Ga0496120_0001283 3300048923 Bacteria 31334
226 Ga0496120_0010737 3300048923 Bacteria 6352
227 Ga0496122_0000028 3300048925 Bacteria 347194
228 Ga0496123_0032181 3300048926 Bacteria 3803
229 Ga0496125_0000004 3300048928 Bacteria 843089
230 Ga0496126_0000002 3300048929 Bacteria 1001703
231 Ga0496126_0002789 3300048929 Bacteria 22993
232 Ga0501033_0088202 3300049570 Bacteria 2270
233 Ga0501046_0149886 3300049580 Bacteria 1760
234 Ga0501048_0100364 3300049582 Bacteria 2042
235 Ga0501069_0088654 3300049585 Bacteria 1749
236 Ga0501071_0034788 3300049587 Bacteria 3588
237 Ga0501072_0060295 3300049588 Bacteria 2992
238 Ga0501072_0088865 3300049588 Bacteria 2452
239 Ga0501074_0063560 3300049590 Bacteria 2659
240 Ga0501075_0007491 3300049591 Bacteria 7569
241 Ga0501076_0013248 3300049592 Bacteria 6183
242 Ga0501076_0025841 3300049592 Bacteria 4546
243 Ga0501076_0129001 3300049592 Bacteria 2050
244 Ga0501247_001059 3300049677 Bacteria 2516
245 Ga0501249_001700 3300049679 Bacteria 4486
246 Ga0501221_005046 3300049704 Unclassified 2199
247 Ga0501079_0188773 3300049741 Bacteria 1608
248 Ga0501268_000316 3300049765 Bacteria 5015
249 nmdc:mga08y16_8250_c1 3300050511 Bacteria 10895
250 nmdc:mga08x19_68_c1 3300050514 Bacteria 101040
251 Ga0500577_0002461 3300053142 Bacteria 4736
252 Ga0500616_0002718 3300053153 Bacteria 14347
253 Ga0501082_0011836 3300060353 Bacteria 7500
254 Ga0501082_0016388 3300060353 Bacteria 6380
255 Ga0501082_0130791 3300060353 Bacteria 2178
256 Ga0307406_10078516
257 LJQas_1000322
258 Ga0065712_10077769
259 Ga0065715_10035216
260 Ga0070658_10005084
261 Ga0070690_100011165
262 Ga0070670_100016513
263 Ga0070670_100106248
264 Ga0070670_100145129
265 Ga0070670_100263752
266 Ga0068869_100040576
267 Ga0068869_100045633
268 Ga0068869_100072820
269 Ga0070666_10020184
270 Ga0068868_100034841
271 Ga0070689_100036954
272 Ga0070687_100037010
273 Ga0070661_100071618
274 Ga0070675_100000804
275 Ga0070675_100001520
276 Ga0070675_100003753
277 Ga0070675_100009365
278 Ga0070675_100031773
279 Ga0070675_100111335
280 Ga0070671_100017835
281 Ga0070671_100027707
282 Ga0070673_100009633
283 Ga0070659_100042240
284 Ga0070667_100004169
285 Ga0070667_100061131
286 Ga0070703_10000361
287 Ga0070701_10058045
288 Ga0070711_100000035
289 Ga0070681_10105777
290 Ga0068867_100094877
291 Ga0070685_10048914
292 Ga0070685_10054651
293 Ga0070679_100074331
294 Ga0068853_100020037
295 Ga0070672_100082086
296 Ga0070672_100120597
297 Ga0070686_100007786
298 Ga0070696_100006775
299 Ga0070665_100203122
300 Ga0070665_100216955
301 Ga0070664_100004318
302 Ga0068854_100100822
303 Ga0068856_100090357
304 Ga0068859_100000581
305 Ga0068859_100015448
306 Ga0068859_100022748
307 Ga0068864_100003312
308 Ga0068864_100012497
309 Ga0068864_100126057
310 Ga0068870_10062991
311 Ga0068863_100002577
312 Ga0068863_100014915
313 Ga0068863_100042046
314 Ga0068863_100114473
315 Ga0068858_100012333
316 Ga0068858_100127212
317 Ga0068860_100001970
318 Ga0068860_100016088
319 Ga0068860_100200320
320 Ga0068862_100025273
321 Ga0068862_100108907
322 Ga0081539_10002022
323 Ga0070715_10000039
324 Ga0070716_100000014
325 Ga0097621_100008451
326 Ga0097621_100011178
327 Ga0097621_100062863
328 Ga0097621_100163000
329 Ga0068871_100004387
330 Ga0068871_100066503
331 Ga0068871_100156896
332 Ga0075434_100133518
333 Ga0068865_100021817
334 Ga0075436_100000747
335 Ga0097620_100000581
336 Ga0097620_100015448
337 Ga0097620_100022748
338 Ga0105240_10122849
339 Ga0111539_10012290
340 Ga0111539_10023482
341 Ga0111539_10059778
342 Ga0111539_10371646
343 Ga0105247_10080267
344 Ga0105241_10033134
345 Ga0105242_10011040
346 Ga0105242_10085365
347 Ga0105248_10000381
348 Ga0105248_10025269
349 Ga0157369_10024146
350 Ga0157369_10117967
351 Ga0157374_10010363
352 Ga0157374_10057460
353 Ga0157378_10003138
354 Ga0157378_10004774
355 Ga0157378_10025138
356 Ga0157378_10032409
357 Ga0163162_10002421
358 Ga0163162_10005311
359 Ga0163162_10012891
360 Ga0163162_10154141
361 Ga0157372_10023816
362 Ga0157372_10026746
363 Ga0157372_10028412
364 Ga0157372_10071478
365 Ga0157372_10128395
366 Ga0157375_10000440
367 Ga0157375_10002713
368 Ga0157375_10228676
369 Ga0157375_10243328
370 Ga0163163_10008738
371 Ga0163163_10030496
372 Ga0163163_10165651
373 Ga0163163_10375312
374 Ga0157380_10089289
375 Ga0157380_10214292
376 Ga0157377_10099971
377 Ga0157379_10000263
378 Ga0157376_10010683
379 Ga0157376_10051747
380 Ga0163161_10000899
381 Ga0163161_10013657
382 Ga0213876_10014131
383 Ga0207710_10031238
384 Ga0207680_10018148
385 Ga0207680_10125792
386 Ga0207685_10000024
387 Ga0207705_10031862
388 Ga0207707_10025004
389 Ga0207663_10000037
390 Ga0207662_10012425
391 Ga0207650_10010436
392 Ga0207650_10014143
393 Ga0207650_10089327
394 Ga0207650_10090004
395 Ga0207659_10000432
396 Ga0207659_10003603
397 Ga0207659_10004454
398 Ga0207659_10009724
399 Ga0207690_10069596
400 Ga0207686_10106738
401 Ga0207709_10012951
402 Ga0207665_10000029
403 Ga0207691_10000304
404 Ga0207691_10007814
405 Ga0207691_10061338
406 Ga0207691_10187297
407 Ga0207711_10002621
408 Ga0207711_10004330
409 Ga0207711_10006063
410 Ga0207689_10026231
411 Ga0207667_10188659
412 Ga0207651_10019038
413 Ga0207651_10115088
414 Ga0207712_10123450
415 Ga0207658_10045574
416 Ga0207677_10001502
417 Ga0207639_10005145
418 Ga0207639_10048521
419 Ga0207678_10168139
420 Ga0207641_10001650
421 Ga0207641_10029064
422 Ga0207641_10037595
423 Ga0207648_10073442
424 Ga0207676_10002231
425 Ga0207676_10044995
426 Ga0207674_10011032
427 Ga0207675_100005354
428 Ga0268266_10147440
429 Ga0268265_10157543
430 Ga0268264_10011013
431 Ga0268264_10015315
432 Ga0268264_10060005
433 Ga0268264_10069822
434 Ga0265316_10000230
435 Ga0265316_10002847
436 Ga0265316_10024069
437 Ga0307513_10005293
438 Ga0307408_100090342
439 Ga0307408_100103939
440 Ga0307405_10004813
441 Ga0307405_10007212
442 Ga0307413_10102535
443 Ga0307410_10006647
444 Ga0307410_10023145
445 Ga0307410_10055901
446 Ga0307410_10083839
447 Ga0307406_10034688
448 Ga0307406_10042030
449 Ga0307407_10005942
450 Ga0307412_10012897
451 Ga0307409_100010405
452 Ga0307409_100011531
453 Ga0307409_100012652
454 Ga0307411_10026640
455 Ga0307411_10035065
456 Ga0307415_100000335
457 Ga0307415_100013524
458 Ga0307415_100072917
459 Ga0373937_0073234
460 Ga0436365_1351609
461 Ga0436365_1648350
462 Ga0453684_0002337
463 Ga0451576_0049419
464 Ga0495592_0004147
465 Ga0495608_0016364
466 Ga0495618_0132989
467 Ga0495630_0183389
468 Ga0495667_0001427
469 Ga0495668_0004924
470 Ga0495657_0003412
471 Ga0495674_0066762
472 Ga0496109_0203978
473 Ga0496114_0026603
474 Ga0496116_0000535
475 Ga0496116_0003910
476 Ga0496117_0000177
477 Ga0496119_0000019
478 Ga0496119_0059963
479 Ga0496120_0000258
480 Ga0496120_0001283
481 Ga0496120_0010737
482 Ga0496122_0000028
483 Ga0496123_0032181
484 Ga0496125_0000004
485 Ga0496126_0000002
486 Ga0496126_0002789
487 Ga0501033_0088202
488 Ga0501046_0149886
489 Ga0501048_0100364
490 Ga0501069_0088654
491 Ga0501071_0034788
492 Ga0501072_0060295
493 Ga0501072_0088865
494 Ga0501074_0063560
495 Ga0501075_0007491
496 Ga0501076_0013248
497 Ga0501076_0025841
498 Ga0501076_0129001
499 Ga0501247_001059
500 Ga0501249_001700
501 Ga0501221_005046
502 Ga0501079_0188773
503 Ga0501268_000316
504 nmdc:mga08y16_8250_c1
505 nmdc:mga08x19_68_c1
506 Ga0500577_0002461
507 Ga0500616_0002718
508 Ga0501082_0011836
509 Ga0501082_0016388
510 Ga0501082_0130791

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

356

464

0.93

PF08245

Mur_ligase_M

Mur ligase middle domain

156

334

0.87

PF21799

MurD-like_N

Mur ligase MurD-like, N-terminal domain

48

140

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4h2p-assembly1.cif.gz_A tetrameric form of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase (mhpco) 0.9901 32 63
7c4a-assembly1.cif.gz_B nica2 with cofactor fad 0.9846 33 63
5x6r-assembly2.cif.gz_B crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9769 32 64
8gsm-assembly1.cif.gz_G crystal structure of vibmo1 0.9576 32 64
4h2n-assembly1.cif.gz_A crystal structure of mhpco, y270f mutant 0.9563 30 63
ID Description Score Start End Superfamily
5ttkA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9814 33 63 3.50.50.60
af_A0A1D6E3F3_39_301_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9771 32 63 3.50.50.60
3lk7A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9703 126 335 3.40.1190.10
af_P9WNY9_4_366_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.97 34 64 3.50.50.60
af_P37631_5_390_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9677 34 62 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A5C7V4G3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9767 345 481 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A1G1LUG2-F1-model_v4 Mur ligase C-terminal domain-containing protein 0.9753 382 483 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A359E2J3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.971 347 477 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A2V9G1D3-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) 0.9692 45 487 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
GO:0071555
AF-X1KLX4-F1-model_v4 Mur ligase central domain-containing protein 0.9685 200 293 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301

Map