F365707

General Info

Members Datasets Scaffolds Average Seq Length
255 180 247 718

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10084120|Ga0163163_100841202
Length 772
Sequence MAYILAGVELGLATKHIAYVAADTGSEGITIGMKLVSQHYKSGAIGLQEVAPPALKAGGILVRTHFSVVSSGTEGMKVREGRLSYFGKARARPDQVKKVLATVRQQGLVAAYQKAMNKLDSLTPLGYSLAGTVVAVGADASEFHVGQRVACAGAGYANHAEVNFVPNNLAVPIPEPVTTRHAAFATVGAIALQGYRQAEMQLGESACVIGLGLLGQLLVQILRAGGMHAIGIDLVPARCELAVQVGASAALTPSDPDLPALIKRMTDGHGVDCVFIAAGGASNAPVELAAALARDRARIVDIGKTRLDLPWNDYYLKELDVRFSRSYGPGRYDPLYEEHGIDYPIGYVRWTERRNLAAFLDLIAEGKIDLDAMTSAVRPFTEAEQVYQELAANAGGLATVFDYTAELAKPINRLLATSRAQPASARTDGRINLGLIGAGNYASSMLLPHFKGNSAVKLAAVATTSSLSAENARQKFGFGRATTDFNDVLSDPTIDAVIIATRHSSHARLVCAALRAGKATYVEKPLALTLQELRDIRLAILESGNARLMVGFNRRFAPLIGTLAERFKHAQTPLVLQYRVHAGQLSGASWYLEATEGSRFAGEAGHFFDVLAYLTRSRPVAVSATCLRPDRATRDDFDNVIATVTYENGSIGSISYLTQGGSRLPKEQLEVFGGGCAARLENFAAVEFFGDTDSRRVKSSGLDKGQGAQLHAFIEALQRGAPMPIPLESLFDTTLTTIGVAQALGTLQSTEIGELWSRLERTEPDEPLDLKK

Samples

Sample ID Description Type Environment
1 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
2 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
3 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
4 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
5 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
6 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
7 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
8 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
94 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
95 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
99 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
104 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
105 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
113 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
117 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
118 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
119 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
120 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
128 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
176 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
178 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
179 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
180 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.86
Metatranscriptomes 0
Isolates 3.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.96
Nodule 0
Rhizoplane 0.78
Rhizosphere 94.9
Stem 0
Stem Tuber 0
Unclassified 2.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1001941 3300003792 Bacteria 11567
2 Ga0070676_10000247 3300005328 Bacteria 23461
3 Ga0070660_100054014 3300005339 Bacteria 3100
4 Ga0070689_100024036 3300005340 Unclassified 4569
5 Ga0070675_100003830 3300005354 Bacteria 11418
6 Ga0070675_100009734 3300005354 Bacteria 7490
7 Ga0070675_100077675 3300005354 Unclassified 2764
8 Ga0070671_100021206 3300005355 Bacteria 5305
9 Ga0070674_100000469 3300005356 Bacteria 20336
10 Ga0070674_100026531 3300005356 Unclassified 3786
11 Ga0070688_100016592 3300005365 Unclassified 4214
12 Ga0070708_100021813 3300005445 Bacteria 5423
13 Ga0070678_100016868 3300005456 Bacteria 4684
14 Ga0070678_100019489 3300005456 Unclassified 4425
15 Ga0070662_100000501 3300005457 Bacteria 23417
16 Ga0070662_100004080 3300005457 Bacteria 9176
17 Ga0068867_100001061 3300005459 Bacteria 18756
18 Ga0070685_10012668 3300005466 Bacteria 4435
19 Ga0070706_100001129 3300005467 Bacteria 28852
20 Ga0070706_100029300 3300005467 Bacteria 5072
21 Ga0070707_100045341 3300005468 Bacteria 4209
22 Ga0070698_100002010 3300005471 Bacteria 22593
23 Ga0070698_100010558 3300005471 Bacteria 9843
24 Ga0070698_100060262 3300005471 Bacteria 3830
25 Ga0070699_100040190 3300005518 Bacteria 4050
26 Ga0070697_100000681 3300005536 Bacteria 25549
27 Ga0070697_100003054 3300005536 Bacteria 12845
28 Ga0070672_100033573 3300005543 Unclassified 3887
29 Ga0070695_100019425 3300005545 Unclassified 4138
30 Ga0070693_100015345 3300005547 Unclassified 3942
31 Ga0070665_100000642 3300005548 Bacteria 47343
32 Ga0070665_100044711 3300005548 Unclassified 4447
33 Ga0070664_100007142 3300005564 Bacteria 9006
34 Ga0070664_100042519 3300005564 Bacteria 3835
35 Ga0070664_100064367 3300005564 Bacteria 3127
36 Ga0068854_100000853 3300005578 Bacteria 18241
37 Ga0070702_100003453 3300005615 Bacteria 7071
38 Ga0070702_100009428 3300005615 Unclassified 4777
39 Ga0068859_100004643 3300005617 Bacteria 13996
40 Ga0068859_100007074 3300005617 Bacteria 11390
41 Ga0068864_100003987 3300005618 Bacteria 12154
42 Ga0068864_100004590 3300005618 Bacteria 11328
43 Ga0068864_100030634 3300005618 Bacteria 4561
44 Ga0068866_10000099 3300005718 Bacteria 36476
45 Ga0068866_10001801 3300005718 Bacteria 9022
46 Ga0068861_100001341 3300005719 Bacteria 15459
47 Ga0068861_100015152 3300005719 Bacteria 5427
48 Ga0068858_100002352 3300005842 Bacteria 19106
49 Ga0068858_100013836 3300005842 Bacteria 7616
50 Ga0068862_100003460 3300005844 Bacteria 13578
51 Ga0081455_10019945 3300005937 Bacteria 6328
52 Ga0081539_10000438 3300005985 Bacteria 88645
53 Ga0081539_10001187 3300005985 Bacteria 46999
54 Ga0075365_10019394 3300006038 Bacteria 4197
55 Ga0075365_10049996 3300006038 Bacteria 2757
56 Ga0075428_100000320 3300006844 Bacteria 47481
57 Ga0075428_100010016 3300006844 Bacteria 10528
58 Ga0075428_100044949 3300006844 Bacteria 4853
59 Ga0075428_100050456 3300006844 Bacteria 4563
60 Ga0075430_100000003 3300006846 Bacteria 134093
61 Ga0075431_100013425 3300006847 Bacteria 8274
62 Ga0075431_100109417 3300006847 Bacteria 2852
63 Ga0075433_10000182 3300006852 Bacteria 35216
64 Ga0075433_10014497 3300006852 Bacteria 6442
65 Ga0075434_100053248 3300006871 Bacteria 4021
66 Ga0075429_100001811 3300006880 Bacteria 17700
67 Ga0075436_100003498 3300006914 Bacteria 10765
68 Ga0097620_100004643 3300006931 Bacteria 13996
69 Ga0097620_100007074 3300006931 Bacteria 11390
70 Ga0075435_100000275 3300007076 Bacteria 31967
71 Ga0111539_10001452 3300009094 Bacteria 31649
72 Ga0111539_10036576 3300009094 Bacteria 5934
73 Ga0105245_10002521 3300009098 Bacteria 16515
74 Ga0114129_10000073 3300009147 Bacteria 92359
75 Ga0114129_10003523 3300009147 Bacteria 22022
76 Ga0114129_10016882 3300009147 Bacteria 10393
77 Ga0114129_10027567 3300009147 Bacteria 8043
78 Ga0114129_10063234 3300009147 Bacteria 5169
79 Ga0114129_10214111 3300009147 Bacteria 2603
80 Ga0105242_10000203 3300009176 Bacteria 46299
81 Ga0105248_10000272 3300009177 Bacteria 60906
82 Ga0105249_10003948 3300009553 Bacteria 12805
83 Ga0105239_10002712 3300010375 Bacteria 22274
84 Ga0105246_10009127 3300011119 Bacteria 6106
85 Ga0157378_10000159 3300013297 Bacteria 64253
86 Ga0157372_10126897 3300013307 Bacteria 2934
87 Ga0157375_10002744 3300013308 Bacteria 15217
88 Ga0157375_10054316 3300013308 Bacteria 3945
89 Ga0157375_10127382 3300013308 Unclassified 2663
90 Ga0163163_10012311 3300014325 Bacteria 7791
91 Ga0163163_10084120 3300014325 Bacteria 3187
92 Ga0163163_10164101 3300014325 Bacteria 2267
93 Ga0157380_10040090 3300014326 Bacteria 3645
94 Ga0157379_10001403 3300014968 Bacteria 19740
95 Ga0157379_10038947 3300014968 Unclassified 4240
96 Ga0209051_1000457 3300025303 Bacteria 53817
97 Ga0207688_10016348 3300025901 Bacteria 4024
98 Ga0207643_10007494 3300025908 Bacteria 5859
99 Ga0207684_10000999 3300025910 Bacteria 31726
100 Ga0207657_10017611 3300025919 Bacteria 6844
101 Ga0207646_10013411 3300025922 Bacteria 7839
102 Ga0207646_10042187 3300025922 Bacteria 4100
103 Ga0207650_10002084 3300025925 Bacteria 13985
104 Ga0207659_10000964 3300025926 Bacteria 17174
105 Ga0207659_10001762 3300025926 Bacteria 12815
106 Ga0207687_10000300 3300025927 Bacteria 33911
107 Ga0207664_10033599 3300025929 Bacteria 3942
108 Ga0207706_10007246 3300025933 Bacteria 10252
109 Ga0207686_10000086 3300025934 Bacteria 78087
110 Ga0207669_10003207 3300025937 Bacteria 7066
111 Ga0207691_10023329 3300025940 Bacteria 5824
112 Ga0207691_10041288 3300025940 Archaea 4260
113 Ga0207689_10002243 3300025942 Bacteria 18107
114 Ga0207689_10034282 3300025942 Bacteria 4216
115 Ga0207679_10010049 3300025945 Bacteria 6082
116 Ga0207651_10021902 3300025960 Unclassified 3894
117 Ga0207712_10027284 3300025961 Unclassified 3812
118 Ga0207703_10000583 3300026035 Bacteria 37176
119 Ga0207703_10009723 3300026035 Bacteria 7546
120 Ga0207678_10015403 3300026067 Bacteria 6725
121 Ga0207678_10017406 3300026067 Bacteria 6312
122 Ga0207708_10037984 3300026075 Unclassified 3668
123 Ga0207648_10000008 3300026089 Bacteria 208822
124 Ga0207674_10002546 3300026116 Bacteria 22963
125 Ga0207674_10024168 3300026116 Bacteria 6497
126 Ga0207675_100000067 3300026118 Bacteria 78814
127 Ga0207675_100001045 3300026118 Bacteria 27413
128 Ga0207675_100016599 3300026118 Bacteria 6877
129 Ga0207683_10022894 3300026121 Bacteria 5368
130 Ga0207683_10022934 3300026121 Bacteria 5365
131 Ga0207683_10033734 3300026121 Unclassified 4448
132 Ga0207428_10001156 3300027907 Bacteria 28544
133 Ga0268266_10044974 3300028379 Bacteria 3775
134 Ga0268264_10019975 3300028381 Bacteria 5472
135 Ga0265337_1000388 3300028556 Bacteria 23718
136 Ga0265319_1000653 3300028563 Bacteria 22880
137 Ga0265334_10000336 3300028573 Bacteria 25150
138 Ga0307515_10084262 3300028794 Bacteria 4085
139 Ga0265338_10000125 3300028800 Bacteria 141151
140 Ga0265338_10034763 3300028800 Bacteria 4862
141 Ga0265324_10002007 3300029957 Bacteria 10855
142 Ga0265330_10019590 3300031235 Bacteria 3097
143 Ga0265332_10013787 3300031238 Bacteria 3578
144 Ga0265325_10001231 3300031241 Bacteria 18246
145 Ga0307408_100022545 3300031548 Bacteria 4280
146 Ga0265313_10023506 3300031595 Bacteria 3318
147 Ga0316579_10003489 3300031691 Bacteria 6143
148 Ga0265342_10038837 3300031712 Bacteria 2896
149 Ga0316578_10001397 3300031728 Bacteria 9752
150 Ga0316577_10011875 3300031733 Bacteria 4730
151 Ga0307413_10000628 3300031824 Bacteria 11927
152 Ga0307406_10029856 3300031901 Bacteria 3305
153 Ga0307414_10007055 3300032004 Bacteria 6299
154 Ga0307411_10030626 3300032005 Bacteria 3300
155 Ga0316574_0008972 3300035398 Bacteria 5583
156 Ga0316582_0009648 3300036647 Bacteria 5246
157 Ga0316584_0024165 3300036712 Bacteria 4446
158 Ga0395905_0000002 3300037471 Bacteria 1356358
159 Ga0436364_1058557 3300037853 Bacteria 5265
160 Ga0400483_245665 3300039062 Bacteria 10836
161 Ga0439446_0003584 3300042156 Bacteria 3866
162 Ga0439434_0000126 3300042435 Bacteria 20487
163 Ga0439435_0000020 3300042436 Bacteria 17347
164 Ga0451577_0002194 3300042876 Bacteria 23787
165 Ga0466972_0000680 3300044658 Bacteria 16338
166 Ga0466965_0001941 3300044683 Bacteria 8636
167 Ga0453684_0009918 3300044712 Bacteria 16439
168 Ga0466968_0000098 3300044735 Bacteria 25762
169 Ga0466970_0012525 3300044765 Bacteria 4339
170 Ga0466957_0000354 3300044842 Bacteria 22541
171 Ga0466957_0041418 3300044842 Bacteria 2785
172 Ga0466960_0000642 3300044901 Bacteria 12095
173 Ga0451576_0008176 3300045051 Bacteria 12317
174 Ga0466967_0002750 3300045976 Bacteria 11127
175 Ga0495630_0000331 3300046517 Bacteria 37728
176 Ga0495586_0000680 3300046535 Bacteria 19376
177 Ga0495586_0020355 3300046535 Bacteria 3533
178 Ga0495659_0000108 3300046664 Bacteria 36730
179 Ga0495674_0011167 3300047319 Bacteria 8482
180 Ga0495687_002660 3300047443 Bacteria 13922
181 Ga0496106_0015095 3300048909 Bacteria 5718
182 Ga0496106_0064538 3300048909 Unclassified 2786
183 Ga0496126_0002703 3300048929 Bacteria 23440
184 Ga0501031_0000747 3300049568 Bacteria 19535
185 Ga0501031_0004158 3300049568 Bacteria 9347
186 Ga0501031_0084892 3300049568 Bacteria 2064
187 Ga0501034_0036682 3300049571 Bacteria 4965
188 Ga0501036_0020439 3300049572 Bacteria 5562
189 Ga0501036_0052755 3300049572 Bacteria 3444
190 Ga0501037_0004066 3300049573 Bacteria 10603
191 Ga0501037_0045036 3300049573 Bacteria 3239
192 Ga0501038_0086133 3300049574 Bacteria 2640
193 Ga0501039_0015467 3300049575 Bacteria 5842
194 Ga0501040_0000120 3300049576 Bacteria 41531
195 Ga0501040_0015467 3300049576 Bacteria 5043
196 Ga0501040_0058338 3300049576 Unclassified 2651
197 Ga0501041_0002710 3300049577 Bacteria 10102
198 Ga0501042_0000324 3300049578 Bacteria 23827
199 Ga0501043_0004469 3300049579 Bacteria 11357
200 Ga0501046_0001233 3300049580 Bacteria 24759
201 Ga0501047_0031153 3300049581 Bacteria 5144
202 Ga0501048_0000688 3300049582 Bacteria 24569
203 Ga0501048_0044036 3300049582 Bacteria 3193
204 Ga0501048_0047597 3300049582 Bacteria 3060
205 Ga0501071_0017645 3300049587 Bacteria 4927
206 Ga0501072_0011582 3300049588 Bacteria 6739
207 Ga0501072_0017019 3300049588 Bacteria 5585
208 Ga0501072_0020603 3300049588 Bacteria 5110
209 Ga0501074_0003494 3300049590 Bacteria 11157
210 Ga0501075_0003578 3300049591 Bacteria 10409
211 Ga0501076_0040849 3300049592 Bacteria 3646
212 Ga0501076_0085035 3300049592 Bacteria 2541
213 Ga0501077_0027501 3300049593 Bacteria 3612
214 Ga0501079_0018924 3300049741 Bacteria 5262
215 Ga0501080_0051585 3300049742 Bacteria 3828
216 Ga0501081_0001432 3300049743 Bacteria 14589
217 Ga0501081_0046053 3300049743 Bacteria 2997
218 Ga0501083_0051413 3300049744 Bacteria 2771
219 Ga0501035_0016940 3300049822 Bacteria 6716
220 Ga0501035_0050833 3300049822 Bacteria 3713
221 Ga0501044_0012964 3300049823 Bacteria 9025
222 Ga0501045_0001422 3300049824 Bacteria 15956
223 Ga0501045_0008050 3300049824 Bacteria 7344
224 nmdc:mga05p37_17326_c1 3300050507 Bacteria 8691
225 nmdc:mga05p37_19362_c1 3300050507 Bacteria 8233
226 nmdc:mga05p37_20_c1 3300050507 Bacteria 127415
227 nmdc:mga09592_1530_c1 3300050508 Bacteria 18632
228 nmdc:mga0qj67_5098_c1 3300050509 Bacteria 9560
229 nmdc:mga0qj67_5_c1 3300050509 Bacteria 160703
230 nmdc:mga0qj67_80328_c1 3300050509 Bacteria 2612
231 nmdc:mga06r32_3313_c2 3300050510 Bacteria 5780
232 nmdc:mga06r32_7065_c1 3300050510 Bacteria 10102
233 nmdc:mga08y16_30329_c1 3300050511 Bacteria 5692
234 nmdc:mga0n895_95150_c1 3300050512 Bacteria 2983
235 nmdc:mga0rr50_1695_c1 3300050513 Bacteria 12174
236 nmdc:mga08x19_5878_c1 3300050514 Bacteria 7257
237 nmdc:mga0a205_2905_c1 3300050515 Bacteria 15159
238 nmdc:mga0a205_4481_c1 3300050515 Bacteria 12538
239 nmdc:mga0a205_79474_c1 3300050515 Bacteria 3169
240 Ga0500568_0000139 3300053139 Bacteria 65345
241 Ga0501084_0000327 3300054114 Bacteria 36348
242 Ga0590071_000175 3300059421 Bacteria 18493
243 Ga0590074_001765 3300059423 Bacteria 3530
244 Ga0590075_000082 3300059424 Bacteria 24320
245 Ga0501082_0014537 3300060353 Bacteria 6778
246 Ga0501082_0025459 3300060353 Bacteria 5098
247 Ga0530510_0005438 3300061734 Bacteria 8815

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049568 Ga0501031_0084892 Ga0501031_0084892_14_1867 600
2 3300037853 Ga0436364_1058557 Ga0436364_1058557_83_2098 620
3 3300005339 Ga0070660_100054014 Ga0070660_1000540142 644
4 3300044842 Ga0466957_0041418 Ga0466957_0041418_17_2017 647
5 3300048909 Ga0496106_0064538 Ga0496106_0064538_17_2008 651
6 3300025929 Ga0207664_10033599 Ga0207664_100335992 653
7 3300049576 Ga0501040_0058338 Ga0501040_0058338_618_2633 654
8 3300025919 Ga0207657_10017611 Ga0207657_100176114 656
9 3300050512 nmdc:mga0n895_95150_c1 nmdc:mga0n895_95150_c1_919_2973 663
10 3300028556 Ga0265337_1000388 Ga0265337_100038815 669
11 3300028563 Ga0265319_1000653 Ga0265319_100065311 669
12 3300028573 Ga0265334_10000336 Ga0265334_100003361 669
13 3300028800 Ga0265338_10000125 Ga0265338_1000012526 669
14 3300029957 Ga0265324_10002007 Ga0265324_100020074 669
15 3300031238 Ga0265332_10013787 Ga0265332_100137872 669
16 3300031241 Ga0265325_10001231 Ga0265325_100012316 669
17 3300031712 Ga0265342_10038837 Ga0265342_100388371 669
18 3300009147 Ga0114129_10214111 Ga0114129_102141112 670
19 3300053139 Ga0500568_0000139 Ga0500568_0000139_32106_34253 673
20 3300014968 Ga0157379_10001403 Ga0157379_1000140314 674
21 3300006871 Ga0075434_100053248 Ga0075434_1000532482 678
22 3300050515 nmdc:mga0a205_79474_c1 nmdc:mga0a205_79474_c1_518_2725 678
23 3300005536 Ga0070697_100000681 Ga0070697_10000068115 680
24 3300025960 Ga0207651_10021902 Ga0207651_100219022 680
25 3300037471 Ga0395905_0000002 Ga0395905_0000002_1003317_1005449 682
26 3300005719 Ga0068861_100001341 Ga0068861_1000013416 684
27 3300026118 Ga0207675_100000067 Ga0207675_10000006752 684
28 3300028800 Ga0265338_10034763 Ga0265338_100347631 684
29 3300005354 Ga0070675_100003830 Ga0070675_1000038303 685
30 3300014326 Ga0157380_10040090 Ga0157380_100400902 685
31 3300025940 Ga0207691_10041288 Ga0207691_100412882 685
32 3300013307 Ga0157372_10126897 Ga0157372_101268972 686
33 3300005445 Ga0070708_100021813 Ga0070708_1000218133 687
34 3300005618 Ga0068864_100003987 Ga0068864_1000039875 687
35 3300005548 Ga0070665_100000642 Ga0070665_1000006428 688
36 3300049568 Ga0501031_0004158 Ga0501031_0004158_5900_8089 689
37 3300049572 Ga0501036_0020439 Ga0501036_0020439_3285_5474 689
38 3300049573 Ga0501037_0045036 Ga0501037_0045036_463_2652 689
39 3300049574 Ga0501038_0086133 Ga0501038_0086133_300_2489 689
40 3300049575 Ga0501039_0015467 Ga0501039_0015467_345_2534 689
41 3300049576 Ga0501040_0000120 Ga0501040_0000120_23471_25660 689
42 3300049577 Ga0501041_0002710 Ga0501041_0002710_1334_3523 689
43 3300049578 Ga0501042_0000324 Ga0501042_0000324_4223_6412 689
44 3300049580 Ga0501046_0001233 Ga0501046_0001233_1226_3415 689
45 3300049581 Ga0501047_0031153 Ga0501047_0031153_2918_5107 689
46 3300049582 Ga0501048_0000688 Ga0501048_0000688_8179_10368 689
47 3300049588 Ga0501072_0020603 Ga0501072_0020603_1723_3912 689
48 3300049590 Ga0501074_0003494 Ga0501074_0003494_6753_8942 689
49 3300049741 Ga0501079_0018924 Ga0501079_0018924_1736_3925 689
50 3300049742 Ga0501080_0051585 Ga0501080_0051585_645_2834 689
51 3300049743 Ga0501081_0001432 Ga0501081_0001432_11890_14079 689
52 3300049744 Ga0501083_0051413 Ga0501083_0051413_453_2642 689
53 3300049822 Ga0501035_0050833 Ga0501035_0050833_1383_3572 689
54 3300049824 Ga0501045_0001422 Ga0501045_0001422_169_2358 689
55 3300054114 Ga0501084_0000327 Ga0501084_0000327_25169_27358 689
56 3300060353 Ga0501082_0025459 Ga0501082_0025459_2665_4854 689
57 3300025922 Ga0207646_10013411 Ga0207646_100134116 691
58 3300031901 Ga0307406_10029856 Ga0307406_100298561 691
59 3300039062 Ga0400483_245665 Ga0400483_245665_7884_10073 691
60 3300048929 Ga0496126_0002703 Ga0496126_0002703_15376_17553 691
61 3300031548 Ga0307408_100022545 Ga0307408_1000225452 692
62 3300032004 Ga0307414_10007055 Ga0307414_100070552 692
63 3300032005 Ga0307411_10030626 Ga0307411_100306262 692
64 3300046664 Ga0495659_0000108 Ga0495659_0000108_13184_15418 693
65 3300049573 Ga0501037_0004066 Ga0501037_0004066_6146_8266 694
66 3300049579 Ga0501043_0004469 Ga0501043_0004469_4494_6614 694
67 3300049822 Ga0501035_0016940 Ga0501035_0016940_1935_4055 694
68 3300049823 Ga0501044_0012964 Ga0501044_0012964_2951_5071 694
69 3300046517 Ga0495630_0000331 Ga0495630_0000331_34588_36783 696
70 3300046535 Ga0495586_0020355 Ga0495586_0020355_222_2417 696
71 3300005564 Ga0070664_100064367 Ga0070664_1000643672 697
72 3300025926 Ga0207659_10000964 Ga0207659_100009645 697
73 3300042876 Ga0451577_0002194 Ga0451577_0002194_2550_4727 698
74 3300045051 Ga0451576_0008176 Ga0451576_0008176_5247_7424 698
75 3300005467 Ga0070706_100001129 Ga0070706_10000112919 699
76 3300005468 Ga0070707_100045341 Ga0070707_1000453412 699
77 3300005471 Ga0070698_100002010 Ga0070698_10000201017 699
78 3300005536 Ga0070697_100003054 Ga0070697_1000030545 699
79 3300025901 Ga0207688_10016348 Ga0207688_100163482 699
80 3300025910 Ga0207684_10000999 Ga0207684_1000099919 699
81 3300025922 Ga0207646_10042187 Ga0207646_100421872 699
82 3300026067 Ga0207678_10015403 Ga0207678_100154032 699
83 3300005617 Ga0068859_100004643 Ga0068859_1000046436 700
84 3300005842 Ga0068858_100002352 Ga0068858_1000023526 700
85 3300006931 Ga0097620_100004643 Ga0097620_1000046437 700
86 3300026035 Ga0207703_10000583 Ga0207703_1000058313 700
87 3300005456 Ga0070678_100016868 Ga0070678_1000168682 701
88 3300005466 Ga0070685_10012668 Ga0070685_100126682 701
89 3300005618 Ga0068864_100030634 Ga0068864_1000306342 701
90 3300013308 Ga0157375_10054316 Ga0157375_100543162 701
91 3300025908 Ga0207643_10007494 Ga0207643_100074942 701
92 3300025942 Ga0207689_10034282 Ga0207689_100342822 701
93 3300026116 Ga0207674_10024168 Ga0207674_100241684 701
94 3300026121 Ga0207683_10022934 Ga0207683_100229343 701
95 3300049572 Ga0501036_0052755 Ga0501036_0052755_1139_3301 701
96 3300049576 Ga0501040_0015467 Ga0501040_0015467_2031_4193 701
97 3300049582 Ga0501048_0044036 Ga0501048_0044036_957_3119 701
98 3300049588 Ga0501072_0011582 Ga0501072_0011582_2975_5137 701
99 3300049592 Ga0501076_0040849 Ga0501076_0040849_1015_3177 701
100 3300006852 Ga0075433_10014497 Ga0075433_100144974 702
101 3300009094 Ga0111539_10001452 Ga0111539_1000145211 702
102 3300009147 Ga0114129_10027567 Ga0114129_100275675 702
103 3300009147 Ga0114129_10063234 Ga0114129_100632343 702
104 3300050507 nmdc:mga05p37_19362_c1 nmdc:mga05p37_19362_c1_4902_7109 702
105 3300050515 nmdc:mga0a205_2905_c1 nmdc:mga0a205_2905_c1_4871_7078 702
106 iso_pu_bacteria 8054160619 8054165288 702
107 3300005471 Ga0070698_100010558 Ga0070698_1000105582 703
108 3300044712 Ga0453684_0009918 Ga0453684_0009918_9627_11786 703
109 iso_pu_bacteria 2954380949 2954382373 703
110 3300005356 Ga0070674_100026531 Ga0070674_1000265312 704
111 3300005467 Ga0070706_100029300 Ga0070706_1000293004 704
112 3300005718 Ga0068866_10001801 Ga0068866_1000180111 704
113 3300006844 Ga0075428_100000320 Ga0075428_1000003206 704
114 3300006846 Ga0075430_100000003 Ga0075430_100000003107 704
115 3300006880 Ga0075429_100001811 Ga0075429_1000018117 704
116 3300009147 Ga0114129_10000073 Ga0114129_1000007352 704
117 3300049587 Ga0501071_0017645 Ga0501071_0017645_1896_4061 704
118 3300049588 Ga0501072_0017019 Ga0501072_0017019_616_2781 704
119 3300049591 Ga0501075_0003578 Ga0501075_0003578_3447_5612 704
120 3300049592 Ga0501076_0085035 Ga0501076_0085035_26_2191 704
121 3300049593 Ga0501077_0027501 Ga0501077_0027501_444_2609 704
122 3300049824 Ga0501045_0008050 Ga0501045_0008050_3355_5520 704
123 3300050507 nmdc:mga05p37_20_c1 nmdc:mga05p37_20_c1_65018_67177 704
124 3300050508 nmdc:mga09592_1530_c1 nmdc:mga09592_1530_c1_1353_3512 704
125 3300050509 nmdc:mga0qj67_5_c1 nmdc:mga0qj67_5_c1_13072_15231 704
126 3300050510 nmdc:mga06r32_7065_c1 nmdc:mga06r32_7065_c1_3927_6086 704
127 3300060353 Ga0501082_0014537 Ga0501082_0014537_3335_5500 704
128 3300061734 Ga0530510_0005438 Ga0530510_0005438_3076_5241 704
129 iso_pu_bacteria 2808606982 2811846484 704
130 iso_pu_bacteria 2862178590 2862182133 704
131 iso_pu_bacteria 2935390628 2935393737 704
132 iso_pu_bacteria 2947224130 2947226365 704
133 3300006844 Ga0075428_100044949 Ga0075428_1000449492 705
134 3300027907 Ga0207428_10001156 Ga0207428_100011567 705
135 3300049568 Ga0501031_0000747 Ga0501031_0000747_8299_10479 705
136 3300049571 Ga0501034_0036682 Ga0501034_0036682_1059_3239 705
137 3300006852 Ga0075433_10000182 Ga0075433_1000018226 706
138 3300006914 Ga0075436_100003498 Ga0075436_1000034982 706
139 3300007076 Ga0075435_100000275 Ga0075435_1000002753 706
140 3300031824 Ga0307413_10000628 Ga0307413_100006286 706
141 3300050513 nmdc:mga0rr50_1695_c1 nmdc:mga0rr50_1695_c1_9464_11641 706
142 3300050514 nmdc:mga08x19_5878_c1 nmdc:mga08x19_5878_c1_3812_5989 706
143 3300050515 nmdc:mga0a205_4481_c1 nmdc:mga0a205_4481_c1_444_2621 706
144 3300009147 Ga0114129_10003523 Ga0114129_100035231 708
145 3300028794 Ga0307515_10084262 Ga0307515_100842622 708
146 3300047319 Ga0495674_0011167 Ga0495674_0011167_249_2444 708
147 3300006038 Ga0075365_10019394 Ga0075365_100193942 709
148 3300009147 Ga0114129_10016882 Ga0114129_100168827 709
149 3300047443 Ga0495687_002660 Ga0495687_002660_4988_7177 709
150 3300005355 Ga0070671_100021206 Ga0070671_1000212063 710
151 3300005564 Ga0070664_100042519 Ga0070664_1000425192 710
152 3300005985 Ga0081539_10001187 Ga0081539_1000118736 710
153 3300006038 Ga0075365_10049996 Ga0075365_100499962 710
154 3300014325 Ga0163163_10164101 Ga0163163_101641011 710
155 3300026067 Ga0207678_10017406 Ga0207678_100174061 710
156 3300026121 Ga0207683_10022894 Ga0207683_100228942 710
157 3300059421 Ga0590071_000175 Ga0590071_000175_739_2901 710
158 3300059423 Ga0590074_001765 Ga0590074_001765_1147_3309 710
159 3300059424 Ga0590075_000082 Ga0590075_000082_14165_16327 710
160 3300005985 Ga0081539_10000438 Ga0081539_1000043885 711
161 3300046535 Ga0495586_0000680 Ga0495586_0000680_12528_14717 711
162 3300049582 Ga0501048_0047597 Ga0501048_0047597_53_2251 711
163 3300049743 Ga0501081_0046053 Ga0501081_0046053_145_2304 711
164 3300005615 Ga0070702_100003453 Ga0070702_1000034535 712
165 3300005937 Ga0081455_10019945 Ga0081455_100199452 712
166 3300025925 Ga0207650_10002084 Ga0207650_100020842 712
167 3300026116 Ga0207674_10002546 Ga0207674_1000254613 712
168 3300042156 Ga0439446_0003584 Ga0439446_0003584_343_2508 712
169 3300042435 Ga0439434_0000126 Ga0439434_0000126_9505_11670 712
170 3300042436 Ga0439435_0000020 Ga0439435_0000020_5371_7536 712
171 3300005328 Ga0070676_10000247 Ga0070676_1000024712 713
172 3300005356 Ga0070674_100000469 Ga0070674_1000004695 713
173 3300005456 Ga0070678_100019489 Ga0070678_1000194892 713
174 3300005457 Ga0070662_100000501 Ga0070662_10000050118 713
175 3300005459 Ga0068867_100001061 Ga0068867_1000010619 713
176 3300005545 Ga0070695_100019425 Ga0070695_1000194252 713
177 3300005547 Ga0070693_100015345 Ga0070693_1000153452 713
178 3300005578 Ga0068854_100000853 Ga0068854_10000085310 713
179 3300005615 Ga0070702_100009428 Ga0070702_1000094282 713
180 3300005718 Ga0068866_10000099 Ga0068866_100000999 713
181 3300005842 Ga0068858_100013836 Ga0068858_1000138365 713
182 3300009094 Ga0111539_10036576 Ga0111539_100365764 713
183 3300009176 Ga0105242_10000203 Ga0105242_100002032 713
184 3300009177 Ga0105248_10000272 Ga0105248_1000027216 713
185 3300009553 Ga0105249_10003948 Ga0105249_100039483 713
186 3300010375 Ga0105239_10002712 Ga0105239_1000271212 713
187 3300013297 Ga0157378_10000159 Ga0157378_1000015921 713
188 3300013308 Ga0157375_10127382 Ga0157375_101273822 713
189 3300014968 Ga0157379_10038947 Ga0157379_100389472 713
190 3300025934 Ga0207686_10000086 Ga0207686_1000008644 713
191 3300025937 Ga0207669_10003207 Ga0207669_100032074 713
192 3300025942 Ga0207689_10002243 Ga0207689_100022433 713
193 3300025961 Ga0207712_10027284 Ga0207712_100272842 713
194 3300026035 Ga0207703_10009723 Ga0207703_100097235 713
195 3300026075 Ga0207708_10037984 Ga0207708_100379842 713
196 3300026089 Ga0207648_10000008 Ga0207648_1000000830 713
197 3300026121 Ga0207683_10033734 Ga0207683_100337342 713
198 3300028381 Ga0268264_10019975 Ga0268264_100199753 713
199 3300048909 Ga0496106_0015095 Ga0496106_0015095_1493_3658 713
200 3300050511 nmdc:mga08y16_30329_c1 nmdc:mga08y16_30329_c1_2739_4904 713
201 3300005471 Ga0070698_100060262 Ga0070698_1000602622 714
202 3300031235 Ga0265330_10019590 Ga0265330_100195902 714
203 3300031595 Ga0265313_10023506 Ga0265313_100235063 714
204 3300006844 Ga0075428_100050456 Ga0075428_1000504564 716
205 3300006847 Ga0075431_100013425 Ga0075431_10001342510 716
206 3300050509 nmdc:mga0qj67_5098_c1 nmdc:mga0qj67_5098_c1_4743_6926 716
207 3300005518 Ga0070699_100040190 Ga0070699_1000401902 717
208 3300031691 Ga0316579_10003489 Ga0316579_100034893 717
209 3300031728 Ga0316578_10001397 Ga0316578_100013975 717
210 3300031733 Ga0316577_10011875 Ga0316577_100118752 717
211 3300035398 Ga0316574_0008972 Ga0316574_0008972_2226_4436 717
212 3300036647 Ga0316582_0009648 Ga0316582_0009648_2935_5145 717
213 3300036712 Ga0316584_0024165 Ga0316584_0024165_1147_3357 717
214 3300044658 Ga0466972_0000680 Ga0466972_0000680_6273_8429 717
215 3300044683 Ga0466965_0001941 Ga0466965_0001941_241_2397 717
216 3300044735 Ga0466968_0000098 Ga0466968_0000098_15655_17811 717
217 3300044765 Ga0466970_0012525 Ga0466970_0012525_1218_3374 717
218 3300044842 Ga0466957_0000354 Ga0466957_0000354_18236_20392 717
219 3300044901 Ga0466960_0000642 Ga0466960_0000642_2057_4213 717
220 3300045976 Ga0466967_0002750 Ga0466967_0002750_1963_4119 717
221 3300050507 nmdc:mga05p37_17326_c1 nmdc:mga05p37_17326_c1_36_2234 717
222 3300050509 nmdc:mga0qj67_80328_c1 nmdc:mga0qj67_80328_c1_325_2523 717
223 3300005354 Ga0070675_100077675 Ga0070675_1000776752 718
224 3300005457 Ga0070662_100004080 Ga0070662_1000040809 718
225 3300006844 Ga0075428_100010016 Ga0075428_1000100167 718
226 3300009098 Ga0105245_10002521 Ga0105245_100025212 718
227 3300011119 Ga0105246_10009127 Ga0105246_100091274 718
228 3300013308 Ga0157375_10002744 Ga0157375_100027447 718
229 3300025927 Ga0207687_10000300 Ga0207687_1000030032 718
230 3300025933 Ga0207706_10007246 Ga0207706_100072461 718
231 3300026118 Ga0207675_100001045 Ga0207675_1000010457 718
232 iso_pu_bacteria 2791354901 2791913852 721
233 3300006847 Ga0075431_100109417 Ga0075431_1001094172 723
234 3300050510 nmdc:mga06r32_3313_c2 nmdc:mga06r32_3313_c2_2102_4519 723
235 3300014325 Ga0163163_10084120 Ga0163163_100841202 724
236 3300028379 Ga0268266_10044974 Ga0268266_100449742 725
237 3300005340 Ga0070689_100024036 Ga0070689_1000240362 727
238 3300005354 Ga0070675_100009734 Ga0070675_1000097344 727
239 3300005365 Ga0070688_100016592 Ga0070688_1000165921 727
240 3300005543 Ga0070672_100033573 Ga0070672_1000335732 727
241 3300005548 Ga0070665_100044711 Ga0070665_1000447112 727
242 3300005564 Ga0070664_100007142 Ga0070664_1000071425 727
243 3300005617 Ga0068859_100007074 Ga0068859_1000070745 727
244 3300005618 Ga0068864_100004590 Ga0068864_1000045907 727
245 3300005719 Ga0068861_100015152 Ga0068861_1000151522 727
246 3300005844 Ga0068862_100003460 Ga0068862_1000034607 727
247 3300006931 Ga0097620_100007074 Ga0097620_1000070745 727
248 3300014325 Ga0163163_10012311 Ga0163163_100123114 727
249 3300025926 Ga0207659_10001762 Ga0207659_100017629 727
250 3300025940 Ga0207691_10023329 Ga0207691_100233293 727
251 3300025945 Ga0207679_10010049 Ga0207679_100100493 727
252 3300026118 Ga0207675_100016599 Ga0207675_1000165993 727
253 iso_pu_bacteria 2643221715 2644639746 734
254 3300003792 Ga0055540_1001941 Ga0055540_10019414 740
255 3300025303 Ga0209051_1000457 Ga0209051_100045711 740

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

214

338

0.94

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

431

552

0.9

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

573

676

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8764 396 710
4h3v-assembly1.cif.gz_B crystal structure of oxidoreductase domain protein from kribbella flavida 0.869 396 718
7bvj-assembly3.cif.gz_C udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8655 396 710
7bvk-assembly2.cif.gz_B udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p212121) 0.8642 396 710
3uuw-assembly1.cif.gz_D 1.63 angstrom resolution crystal structure of dehydrogenase (mvim) from clostridium difficile. 0.8636 399 710
ID Description Score Start End Superfamily
af_O15229_1_369_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9404 171 202 3.50.50.60
af_Q54H99_9_164_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9381 171 204 3.50.50.60
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9275 399 518 3.40.50.720
2glxE01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.924 400 517 3.40.50.720
af_P77503_5_146_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9234 397 532 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A519CNF1-F1-model_v4 Oxidoreductase 0.9619 1 718 GO:0000166
GO:0016491
AF-A0A519CNF1-F1-model_v4 Oxidoreductase 0.9605 1 718 GO:0000166
GO:0016491
AF-A0A2S8G0T9-F1-model_v4 Alcohol dehydrogenase 0.9568 1 717 GO:0000166
GO:0016491
AF-A0A2V9WVW5-F1-model_v4 Oxidoreductase 0.9533 1 664 GO:0000166
GO:0016491
AF-A0A7V0ZIW6-F1-model_v4 Zinc-binding alcohol dehydrogenase 0.9532 1 278 GO:0016491

Feature Viewer

pLDDT pTM Quality
86.78 0.82 High
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Predicted Structure (AlphaFold2)

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