F365700

General Info

Members Datasets Scaffolds Average Seq Length
255 207 510 336

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10036740|Ga0163162_100367403
Length 385
Sequence MSIPVTGTDGHEVADGIRAHMNDEKAAVTTLSGLSTNADVPDIELTARPVEGSVAGKTVLVTGSDGFIGSHVVERLVADGAHVRAFCLYNSNGSTGWLDESYVFKAAVRDGQAEVVLGDIRDPEHVMATTEGVDVVLHLAALIAIPFSYVAPRSYVETNVIGTLNVLEAVRRHGTPRMVNTSTSEVYGTPESVPITEAHPLRGQSPYSATKISADKMCESYALSFETPVTTLRPFNTFGPRQSTRAVIPTVLSQLLAGAGQLKLGDLTPKRDFTFVADTADGFVRAALTDVAPGTTIQLGTGRTVSVGDVVELCRKVTGSDAEIVTESDRIRPEGSEVQILLSDPSLANEVLGWAPTVSLEEGLSATAEWLRPRVDPETAGRYHR

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
69 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
70 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
106 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
107 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
111 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
114 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
115 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
116 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
117 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
124 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
125 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
126 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
127 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
128 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
129 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
130 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
131 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
132 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
179 2643221561 Nocardioides sp. Root151 Isolate Unclassified
180 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
181 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
182 2643221696 Nocardioides sp. Root140 Isolate Unclassified
183 2643221711 Terrabacter sp. Root85 Isolate Unclassified
184 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
185 2738541307 Variovorax sp. GV008 Isolate Unclassified
186 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
187 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
188 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
189 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
190 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
191 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
192 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
193 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
194 2862574272 Streptomyces sp. AcE210 Isolate Nodule
195 2867475112 Streptomyces sp. TM32 Isolate Unclassified
196 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
197 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
198 2928037797 Variovorax sp. 1126 Isolate Unclassified
199 2928044640 Variovorax sp. 1128 Isolate Unclassified
200 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
201 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
202 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
203 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
204 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
205 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
206 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
207 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.63
Metatranscriptomes 0
Isolates 11.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.71
Nodule 1.57
Rhizoplane 9.02
Rhizosphere 75.69
Stem 0
Stem Tuber 0
Unclassified 1.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10036740 3300013306 Bacteria 4884
2 JGI25152J39213_1001227 3300002773 Bacteria 11735
3 rootH2_10108652 3300003320 Bacteria 1807
4 rootH1_10368462 3300003323 Bacteria 2516
5 Ga0055534_1000554 3300003784 Bacteria 19780
6 Ga0070683_100092915 3300005329 Bacteria 2834
7 Ga0070680_100013611 3300005336 Bacteria 6340
8 Ga0070680_100308513 3300005336 Bacteria 1342
9 Ga0070668_100098395 3300005347 Bacteria 2315
10 Ga0070668_100265532 3300005347 Bacteria 1429
11 Ga0070669_100148481 3300005353 Bacteria 1813
12 Ga0070671_100001281 3300005355 Bacteria 18863
13 Ga0070674_100036434 3300005356 Bacteria 3303
14 Ga0070709_10081287 3300005434 Bacteria 2114
15 Ga0070713_100095934 3300005436 Bacteria 2559
16 Ga0070710_10058907 3300005437 Bacteria 2179
17 Ga0070701_10009553 3300005438 Bacteria 4254
18 Ga0070711_100061030 3300005439 Bacteria 2623
19 Ga0070705_100202363 3300005440 Unclassified 1362
20 Ga0070708_100225807 3300005445 Bacteria 1757
21 Ga0070662_100107306 3300005457 Bacteria 2122
22 Ga0070681_10002550 3300005458 Bacteria 16712
23 Ga0070699_100000876 3300005518 Bacteria 28011
24 Ga0070679_100012062 3300005530 Bacteria 8251
25 Ga0070679_100088226 3300005530 Bacteria 3089
26 Ga0068853_100218525 3300005539 Bacteria 1740
27 Ga0070686_100109897 3300005544 Bacteria 1876
28 Ga0070696_100026046 3300005546 Unclassified 3978
29 Ga0070696_100129689 3300005546 Bacteria 1833
30 Ga0070693_100074628 3300005547 Bacteria 2006
31 Ga0070665_100118804 3300005548 Bacteria 2646
32 Ga0070704_100130544 3300005549 Bacteria 1946
33 Ga0068855_100056050 3300005563 Bacteria 4626
34 Ga0070664_100109621 3300005564 Bacteria 2408
35 Ga0068856_100099183 3300005614 Bacteria 2903
36 Ga0068856_100427051 3300005614 Bacteria 1345
37 Ga0070702_100061773 3300005615 Bacteria 2182
38 Ga0068866_10038390 3300005718 Bacteria 2357
39 Ga0068861_100062292 3300005719 Bacteria 2865
40 Ga0068860_100030030 3300005843 Bacteria 5227
41 Ga0081540_1004902 3300005983 Bacteria 10079
42 Ga0070717_10381661 3300006028 Bacteria 1264
43 Ga0075364_10157114 3300006051 Bacteria 1534
44 Ga0070712_100048130 3300006175 Bacteria 2954
45 Ga0075367_10229234 3300006178 Bacteria 1163
46 Ga0068871_100155320 3300006358 Bacteria 1954
47 Ga0075428_100000001 3300006844 Bacteria 772630
48 Ga0075428_100002372 3300006844 Bacteria 20444
49 Ga0075431_100056983 3300006847 Bacteria 4030
50 Ga0075434_100119799 3300006871 Bacteria 2646
51 Ga0068865_100244249 3300006881 Bacteria 1414
52 Ga0075435_100209872 3300007076 Bacteria 1652
53 Ga0105240_10069208 3300009093 Bacteria 4370
54 Ga0105240_10184312 3300009093 Bacteria 2460
55 Ga0105240_10380854 3300009093 Bacteria 1593
56 Ga0105240_10489640 3300009093 Bacteria 1369
57 Ga0105247_10116174 3300009101 Bacteria 1728
58 Ga0114129_10022859 3300009147 Bacteria 8867
59 Ga0105243_10000677 3300009148 Bacteria 33243
60 Ga0105241_10157759 3300009174 Bacteria 1862
61 Ga0105248_10193443 3300009177 Bacteria 2292
62 Ga0105237_10149777 3300009545 Bacteria 2329
63 Ga0105237_10156096 3300009545 Bacteria 2279
64 Ga0105237_10244892 3300009545 Bacteria 1794
65 Ga0105249_10034508 3300009553 Bacteria 4585
66 Ga0123340_1009971 3300009763 Bacteria 8841
67 Ga0105239_10078588 3300010375 Bacteria 3631
68 Ga0105239_10161165 3300010375 Bacteria 2506
69 Ga0105239_10221368 3300010375 Bacteria 2122
70 Ga0105246_10022529 3300011119 Bacteria 4065
71 Ga0157371_10003695 3300013102 Bacteria 13739
72 Ga0157370_10174196 3300013104 Bacteria 2000
73 Ga0157374_10109772 3300013296 Bacteria 2652
74 Ga0157378_10071618 3300013297 Bacteria 3113
75 Ga0157378_10243700 3300013297 Bacteria 1718
76 Ga0163163_10085196 3300014325 Bacteria 3168
77 Ga0157380_10066304 3300014326 Unclassified 2903
78 Ga0157380_10097951 3300014326 Bacteria 2435
79 Ga0157377_10056208 3300014745 Bacteria 2234
80 Ga0157379_10148143 3300014968 Bacteria 2117
81 Ga0182007_10047685 3300015262 Bacteria 1417
82 Ga0163161_10022925 3300017792 Bacteria 4399
83 Ga0213873_10018540 3300021358 Bacteria 1601
84 Ga0209129_1000028 3300025258 Bacteria 405451
85 Ga0209675_1000546 3300025291 Bacteria 27468
86 Ga0209025_1003741 3300025294 Bacteria 13949
87 Ga0209025_1004482 3300025294 Bacteria 12091
88 Ga0209050_1046795 3300025298 Bacteria 1133
89 Ga0207426_1001554 3300025302 Bacteria 18646
90 Ga0207710_10048780 3300025900 Bacteria 1896
91 Ga0207688_10018099 3300025901 Bacteria 3835
92 Ga0207647_10052420 3300025904 Bacteria 2518
93 Ga0207685_10026522 3300025905 Bacteria 2016
94 Ga0207645_10227926 3300025907 Bacteria 1229
95 Ga0207707_10031423 3300025912 Bacteria 4646
96 Ga0207671_10070313 3300025914 Bacteria 2609
97 Ga0207693_10005616 3300025915 Bacteria 10429
98 Ga0207660_10026717 3300025917 Bacteria 3933
99 Ga0207660_10079124 3300025917 Bacteria 2411
100 Ga0207657_10050742 3300025919 Bacteria 3608
101 Ga0207652_10017670 3300025921 Bacteria 5839
102 Ga0207652_10163180 3300025921 Bacteria 1998
103 Ga0207681_10104897 3300025923 Bacteria 2046
104 Ga0207687_10068529 3300025927 Bacteria 2528
105 Ga0207700_10072612 3300025928 Bacteria 2654
106 Ga0207664_10401354 3300025929 Bacteria 1219
107 Ga0207644_10012518 3300025931 Bacteria 5637
108 Ga0207644_10127667 3300025931 Bacteria 1943
109 Ga0207706_10021440 3300025933 Bacteria 5802
110 Ga0207686_10037299 3300025934 Bacteria 2932
111 Ga0207709_10000395 3300025935 Bacteria 42894
112 Ga0207665_10145463 3300025939 Bacteria 1694
113 Ga0207712_10039694 3300025961 Bacteria 3227
114 Ga0207677_10125866 3300026023 Bacteria 1936
115 Ga0207703_10004537 3300026035 Bacteria 11387
116 Ga0207678_10010298 3300026067 Bacteria 8206
117 Ga0207702_10212948 3300026078 Bacteria 1797
118 Ga0207702_10329807 3300026078 Bacteria 1455
119 Ga0207676_10179649 3300026095 Bacteria 1852
120 Ga0207674_10108363 3300026116 Bacteria 2754
121 Ga0207675_100067124 3300026118 Bacteria 3353
122 Ga0207683_10052537 3300026121 Bacteria 3571
123 Ga0268266_10117151 3300028379 Bacteria 2367
124 Ga0268264_10088927 3300028381 Bacteria 2659
125 Ga0268264_10112573 3300028381 Bacteria 2386
126 Ga0265336_10000147 3300028666 Bacteria 50015
127 Ga0316182_1026905 3300030745 Bacteria 2300
128 Ga0265325_10072625 3300031241 Bacteria 1724
129 Ga0307509_10002831 3300031507 Bacteria 27484
130 Ga0307509_10163392 3300031507 Bacteria 2120
131 Ga0307408_100074523 3300031548 Bacteria 2519
132 Ga0265313_10073596 3300031595 Bacteria 1568
133 Ga0316576_10231613 3300031727 Bacteria 1389
134 Ga0307405_10000698 3300031731 Bacteria 13009
135 Ga0307415_100023066 3300032126 Bacteria 3855
136 Ga0316583_10020646 3300032133 Bacteria 2360
137 Ga0307510_10118408 3300033180 Bacteria 2362
138 Ga0373928_0012138 3300035084 Bacteria 1715
139 Ga0373960_0004572 3300035121 Bacteria 3176
140 Ga0373931_0029641 3300035691 Bacteria 2811
141 Ga0395898_0285813 3300037466 Bacteria 1573
142 Ga0395901_0106045 3300038443 Bacteria 2949
143 Ga0436365_0423142 3300039437 Bacteria 7330
144 Ga0436360_0746024 3300039438 Bacteria 1545
145 Ga0436362_1210404 3300039453 Bacteria 16373
146 Ga0451837_0321824 3300041494 Bacteria 1252
147 Ga0451853_2357272 3300041512 Bacteria 1234
148 Ga0439442_015673 3300042002 Bacteria 1562
149 Ga0439449_0001405 3300042007 Bacteria 9404
150 Ga0450920_002876 3300042122 Bacteria 2960
151 Ga0451577_0037601 3300042876 Bacteria 4356
152 Ga0466966_0062224 3300044684 Bacteria 2354
153 Ga0466961_0027039 3300044693 Bacteria 3688
154 Ga0466961_0191705 3300044693 Bacteria 1267
155 Ga0466967_0283741 3300045976 Bacteria 1589
156 Ga0495670_0185212 3300046691 Bacteria 1100
157 Ga0495589_0019953 3300046794 Bacteria 3427
158 Ga0495676_0019614 3300047321 Bacteria 5946
159 Ga0496101_0011076 3300048904 Bacteria 5975
160 Ga0496102_0005619 3300048905 Bacteria 10642
161 Ga0496103_0013955 3300048906 Bacteria 4769
162 Ga0496104_0004608 3300048907 Bacteria 12012
163 Ga0496104_0009960 3300048907 Bacteria 8483
164 Ga0496104_0016811 3300048907 Bacteria 6648
165 Ga0496104_0509962 3300048907 Bacteria 1114
166 Ga0496105_0001651 3300048908 Bacteria 15896
167 Ga0496105_0007815 3300048908 Bacteria 8300
168 Ga0496105_0045721 3300048908 Bacteria 3612
169 Ga0496105_0269562 3300048908 Bacteria 1375
170 Ga0496106_0172150 3300048909 Bacteria 1716
171 Ga0496108_0041463 3300048911 Bacteria 3843
172 Ga0496109_0004306 3300048912 Bacteria 11886
173 Ga0496109_0064420 3300048912 Bacteria 3354
174 Ga0496109_0146670 3300048912 Bacteria 2208
175 Ga0496110_0057019 3300048913 Bacteria 3438
176 Ga0496111_0121425 3300048914 Bacteria 1929
177 Ga0496114_0003184 3300048917 Bacteria 12580
178 Ga0496114_0005158 3300048917 Bacteria 10193
179 Ga0496114_0128922 3300048917 Bacteria 2183
180 Ga0496114_0202667 3300048917 Bacteria 1738
181 Ga0496114_0210515 3300048917 Bacteria 1705
182 Ga0496122_0030837 3300048925 Bacteria 4481
183 Ga0496123_0011860 3300048926 Bacteria 7497
184 Ga0496125_0000432 3300048928 Bacteria 77024
185 Ga0501033_0182972 3300049570 Bacteria 1502
186 Ga0501036_0030661 3300049572 Bacteria 4542
187 Ga0501036_0339353 3300049572 Bacteria 1255
188 Ga0501038_0164192 3300049574 Bacteria 1803
189 Ga0501039_0048817 3300049575 Bacteria 3272
190 Ga0501042_0175509 3300049578 Bacteria 1546
191 Ga0501046_0030973 3300049580 Bacteria 4341
192 Ga0501070_0277927 3300049586 Bacteria 1367
193 Ga0501071_0062829 3300049587 Unclassified 2691
194 Ga0501071_0074868 3300049587 Bacteria 2471
195 Ga0501074_0144897 3300049590 Bacteria 1699
196 Ga0501075_0022885 3300049591 Bacteria 4570
197 Ga0501075_0064854 3300049591 Bacteria 2755
198 Ga0501076_0055094 3300049592 Bacteria 3153
199 Ga0501077_0027698 3300049593 Bacteria 3598
200 Ga0501077_0120505 3300049593 Bacteria 1662
201 Ga0501079_0024491 3300049741 Bacteria 4632
202 Ga0501079_0142482 3300049741 Bacteria 1867
203 Ga0501080_0021448 3300049742 Bacteria 5979
204 Ga0501083_0071141 3300049744 Bacteria 2313
205 Ga0501035_0018712 3300049822 Bacteria 6380
206 Ga0501044_0063744 3300049823 Bacteria 3764
207 Ga0501044_0308173 3300049823 Bacteria 1511
208 Ga0501045_0008161 3300049824 Bacteria 7295
209 Ga0501045_0009822 3300049824 Bacteria 6697
210 Ga0501045_0057346 3300049824 Bacteria 2850
211 nmdc:mga00v17_125717_c1 3300050491 Bacteria 1636
212 nmdc:mga06z11_198778_c1 3300050494 Bacteria 1163
213 nmdc:mga05p37_439192_c1 3300050507 Bacteria 1514
214 nmdc:mga09592_83740_c1 3300050508 Bacteria 2718
215 nmdc:mga06r32_49092_c1 3300050510 Bacteria 4035
216 nmdc:mga0n895_24680_c1 3300050512 Bacteria 5668
217 nmdc:mga0rr50_132352_c1 3300050513 Bacteria 1998
218 nmdc:mga0rr50_75713_c1 3300050513 Bacteria 2581
219 nmdc:mga08x19_210191_c1 3300050514 Bacteria 1335
220 Ga0501084_0028177 3300054114 Bacteria 4694
221 Ga0501084_0151706 3300054114 Bacteria 1953
222 Ga0501082_0082797 3300060353 Bacteria 2768
223 Ga0501082_0267239 3300060353 Bacteria 1488
224 Ga0530510_0033487 3300061734 Bacteria 3699
225 Ga0530510_0221859 3300061734 Bacteria 1405
226 Ga0530510_0301269 3300061734 Unclassified 1199
227 2643824803 2643221561 Bacteria 4984412
228 2644017719 2643221601 Bacteria 7493239
229 2644173322 2643221631 Bacteria 8168043
230 2644536054 2643221696 Bacteria 5431823
231 2644611281 2643221711 Bacteria 4865335
232 2688066555 2687453257 Bacteria 6784659
233 2738882520 2738541307 Bacteria 8606193
234 2778179129 2775507266 Bacteria 7392367
235 2819424472 2818991318 Bacteria 5266538
236 2819668136 2818991458 Bacteria 4794049
237 2819745107 2818991472 Bacteria 10089953
238 2838054972 2838054893 Bacteria 7451788
239 2844849499 2844849076 Bacteria 4091819
240 2862186443 2862178590 Bacteria 8583590
241 2862292940 2862290372 Bacteria 7471434
242 2862581457 2862574272 Bacteria 10567477
243 2867478864 2867475112 Bacteria 6909112
244 2889416054 2889415604 Bacteria 8048700
245 2918508930 2918501144 Bacteria 8668083
246 2928043903 2928037797 Bacteria 7273642
247 2928048551 2928044640 Bacteria 7271509
248 2935396182 2935390628 Bacteria 7043367
249 2945914416 2945909444 Bacteria 7065066
250 2945959790 2945956166 Bacteria 5110334
251 2946026383 2946024296 Bacteria 3508095
252 2995469726 2995463766 Bacteria 8577691
253 2997452901 2997451912 Bacteria 8492419
254 8025481031 8025478263 Bacteria 8209203
255 8054166416 8054160619 Bacteria 7783213
256 Ga0163162_10036740
257 JGI25152J39213_1001227
258 rootH2_10108652
259 rootH1_10368462
260 Ga0055534_1000554
261 Ga0070683_100092915
262 Ga0070680_100013611
263 Ga0070680_100308513
264 Ga0070668_100098395
265 Ga0070668_100265532
266 Ga0070669_100148481
267 Ga0070671_100001281
268 Ga0070674_100036434
269 Ga0070709_10081287
270 Ga0070713_100095934
271 Ga0070710_10058907
272 Ga0070701_10009553
273 Ga0070711_100061030
274 Ga0070705_100202363
275 Ga0070708_100225807
276 Ga0070662_100107306
277 Ga0070681_10002550
278 Ga0070699_100000876
279 Ga0070679_100012062
280 Ga0070679_100088226
281 Ga0068853_100218525
282 Ga0070686_100109897
283 Ga0070696_100026046
284 Ga0070696_100129689
285 Ga0070693_100074628
286 Ga0070665_100118804
287 Ga0070704_100130544
288 Ga0068855_100056050
289 Ga0070664_100109621
290 Ga0068856_100099183
291 Ga0068856_100427051
292 Ga0070702_100061773
293 Ga0068866_10038390
294 Ga0068861_100062292
295 Ga0068860_100030030
296 Ga0081540_1004902
297 Ga0070717_10381661
298 Ga0075364_10157114
299 Ga0070712_100048130
300 Ga0075367_10229234
301 Ga0068871_100155320
302 Ga0075428_100000001
303 Ga0075428_100002372
304 Ga0075431_100056983
305 Ga0075434_100119799
306 Ga0068865_100244249
307 Ga0075435_100209872
308 Ga0105240_10069208
309 Ga0105240_10184312
310 Ga0105240_10380854
311 Ga0105240_10489640
312 Ga0105247_10116174
313 Ga0114129_10022859
314 Ga0105243_10000677
315 Ga0105241_10157759
316 Ga0105248_10193443
317 Ga0105237_10149777
318 Ga0105237_10156096
319 Ga0105237_10244892
320 Ga0105249_10034508
321 Ga0123340_1009971
322 Ga0105239_10078588
323 Ga0105239_10161165
324 Ga0105239_10221368
325 Ga0105246_10022529
326 Ga0157371_10003695
327 Ga0157370_10174196
328 Ga0157374_10109772
329 Ga0157378_10071618
330 Ga0157378_10243700
331 Ga0163163_10085196
332 Ga0157380_10066304
333 Ga0157380_10097951
334 Ga0157377_10056208
335 Ga0157379_10148143
336 Ga0182007_10047685
337 Ga0163161_10022925
338 Ga0213873_10018540
339 Ga0209129_1000028
340 Ga0209675_1000546
341 Ga0209025_1003741
342 Ga0209025_1004482
343 Ga0209050_1046795
344 Ga0207426_1001554
345 Ga0207710_10048780
346 Ga0207688_10018099
347 Ga0207647_10052420
348 Ga0207685_10026522
349 Ga0207645_10227926
350 Ga0207707_10031423
351 Ga0207671_10070313
352 Ga0207693_10005616
353 Ga0207660_10026717
354 Ga0207660_10079124
355 Ga0207657_10050742
356 Ga0207652_10017670
357 Ga0207652_10163180
358 Ga0207681_10104897
359 Ga0207687_10068529
360 Ga0207700_10072612
361 Ga0207664_10401354
362 Ga0207644_10012518
363 Ga0207644_10127667
364 Ga0207706_10021440
365 Ga0207686_10037299
366 Ga0207709_10000395
367 Ga0207665_10145463
368 Ga0207712_10039694
369 Ga0207677_10125866
370 Ga0207703_10004537
371 Ga0207678_10010298
372 Ga0207702_10212948
373 Ga0207702_10329807
374 Ga0207676_10179649
375 Ga0207674_10108363
376 Ga0207675_100067124
377 Ga0207683_10052537
378 Ga0268266_10117151
379 Ga0268264_10088927
380 Ga0268264_10112573
381 Ga0265336_10000147
382 Ga0316182_1026905
383 Ga0265325_10072625
384 Ga0307509_10002831
385 Ga0307509_10163392
386 Ga0307408_100074523
387 Ga0265313_10073596
388 Ga0316576_10231613
389 Ga0307405_10000698
390 Ga0307415_100023066
391 Ga0316583_10020646
392 Ga0307510_10118408
393 Ga0373928_0012138
394 Ga0373960_0004572
395 Ga0373931_0029641
396 Ga0395898_0285813
397 Ga0395901_0106045
398 Ga0436365_0423142
399 Ga0436360_0746024
400 Ga0436362_1210404
401 Ga0451837_0321824
402 Ga0451853_2357272
403 Ga0439442_015673
404 Ga0439449_0001405
405 Ga0450920_002876
406 Ga0451577_0037601
407 Ga0466966_0062224
408 Ga0466961_0027039
409 Ga0466961_0191705
410 Ga0466967_0283741
411 Ga0495670_0185212
412 Ga0495589_0019953
413 Ga0495676_0019614
414 Ga0496101_0011076
415 Ga0496102_0005619
416 Ga0496103_0013955
417 Ga0496104_0004608
418 Ga0496104_0009960
419 Ga0496104_0016811
420 Ga0496104_0509962
421 Ga0496105_0001651
422 Ga0496105_0007815
423 Ga0496105_0045721
424 Ga0496105_0269562
425 Ga0496106_0172150
426 Ga0496108_0041463
427 Ga0496109_0004306
428 Ga0496109_0064420
429 Ga0496109_0146670
430 Ga0496110_0057019
431 Ga0496111_0121425
432 Ga0496114_0003184
433 Ga0496114_0005158
434 Ga0496114_0128922
435 Ga0496114_0202667
436 Ga0496114_0210515
437 Ga0496122_0030837
438 Ga0496123_0011860
439 Ga0496125_0000432
440 Ga0501033_0182972
441 Ga0501036_0030661
442 Ga0501036_0339353
443 Ga0501038_0164192
444 Ga0501039_0048817
445 Ga0501042_0175509
446 Ga0501046_0030973
447 Ga0501070_0277927
448 Ga0501071_0062829
449 Ga0501071_0074868
450 Ga0501074_0144897
451 Ga0501075_0022885
452 Ga0501075_0064854
453 Ga0501076_0055094
454 Ga0501077_0027698
455 Ga0501077_0120505
456 Ga0501079_0024491
457 Ga0501079_0142482
458 Ga0501080_0021448
459 Ga0501083_0071141
460 Ga0501035_0018712
461 Ga0501044_0063744
462 Ga0501044_0308173
463 Ga0501045_0008161
464 Ga0501045_0009822
465 Ga0501045_0057346
466 nmdc:mga00v17_125717_c1
467 nmdc:mga06z11_198778_c1
468 nmdc:mga05p37_439192_c1
469 nmdc:mga09592_83740_c1
470 nmdc:mga06r32_49092_c1
471 nmdc:mga0n895_24680_c1
472 nmdc:mga0rr50_132352_c1
473 nmdc:mga0rr50_75713_c1
474 nmdc:mga08x19_210191_c1
475 Ga0501084_0028177
476 Ga0501084_0151706
477 Ga0501082_0082797
478 Ga0501082_0267239
479 Ga0530510_0033487
480 Ga0530510_0221859
481 Ga0530510_0301269
482 2643824803
483 2644017719
484 2644173322
485 2644536054
486 2644611281
487 2688066555
488 2738882520
489 2778179129
490 2819424472
491 2819668136
492 2819745107
493 2838054972
494 2844849499
495 2862186443
496 2862292940
497 2862581457
498 2867478864
499 2889416054
500 2918508930
501 2928043903
502 2928048551
503 2935396182
504 2945914416
505 2945959790
506 2946026383
507 2995469726
508 2997452901
509 8025481031
510 8054166416

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

59

300

0.95

PF04321

RmlD_sub_bind

RmlD substrate binding domain

57

228

0.93

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

60

367

0.89

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

60

298

0.82

PF00106

adh_short

short chain dehydrogenase

57

231

0.81

PF07993

NAD_binding_4

Male sterility protein

61

286

0.79

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

59

337

0.78

PF13460

NAD_binding_10

NAD(P)H-binding

63

248

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kv9-assembly1.cif.gz_A-2 moee5 in complex with udp-glucuronic acid and nad 0.934 10 323
6kv9-assembly1.cif.gz_A-2 moee5 in complex with udp-glucuronic acid and nad 0.9249 10 323
4lw8-assembly1.cif.gz_B crystal structure of a putative epimerase from burkholderia cenocepacia j2315 0.9244 7 322
6dnt-assembly1.cif.gz_A-2 udp-n-acetylglucosamine 4-epimerase from methanobrevibacter ruminantium m1 in complex with udp-n-acetylmuramic acid 0.9233 7 324
6kvc-assembly1.cif.gz_A-2 moee5 in complex with udp-glucose and nad 0.9217 10 323
ID Description Score Start End Superfamily
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9401 7 249 3.40.50.720
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9312 7 249 3.40.50.720
af_Q0DDZ4_1_298_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9224 66 323 3.40.50.720
af_Q4CM81_7_150_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.921 9 148 3.40.50.720
4zrnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9143 10 249 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A357VSV2-F1-model_v4 NAD-dependent dehydratase 0.9846 10 251 GO:0016831
AF-A0A612BD84-F1-model_v4 deleted 0.979 9 254
AF-A0A357VSV2-F1-model_v4 NAD-dependent dehydratase 0.9765 10 251 GO:0016831
AF-A0A496U4I3-F1-model_v4 NAD-dependent dehydratase 0.9761 1 322
AF-A0A849GSL6-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9731 75 335

Map