F365258

General Info

Members Datasets Scaffolds Average Seq Length
254 201 237 214

Family's Representative Sequence

Representative Sequence 3300053098|Ga0500650_0001306|Ga0500650_0001306_628_1338
Length 236
Sequence VGDSGIGVQTPLTTAGAGERLGRDGKEGTMSGRILIDLFTTLDGVSQAPGGPEEDPEGGFEFGGWQAPLIGGDGDRIIEGIRSADALLLGRRTYDIFAGYWPHQVDGRDSEIATKFDSIPKYVASRGTPALGWRDSHRVGGDLAADLAAMRERHAETHVIGSIDFARTLIAESLFDQLNLWVYPIVLGRGKRLFEADSPPRGLELVEPPVADAGAVLLRYRPTGRVPATGDMAPQG

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2643221549 Agromyces sp. Root1464 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
5 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
6 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
7 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
8 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
9 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
10 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
11 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
12 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
13 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
14 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
54 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
79 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
119 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
120 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
126 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
127 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
128 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
134 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
135 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
154 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
155 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
159 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
174 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
177 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
178 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
179 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
180 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
181 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
182 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
183 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
186 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
187 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
188 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
189 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
190 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
191 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
192 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
193 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
194 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
195 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
196 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
197 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
198 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
199 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
200 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
201 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.31
Metatranscriptomes 0
Isolates 6.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.94
Nodule 0
Rhizoplane 9.06
Rhizosphere 77.56
Stem 0
Stem Tuber 0
Unclassified 9.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10032322 3300003203 Bacteria 1945
2 rootH2_10070337 3300003320 Bacteria 10995
3 Ga0065714_10004785 3300005288 Bacteria 6134
4 Ga0070676_10016571 3300005328 Bacteria 4076
5 Ga0070683_100003578 3300005329 Bacteria 12645
6 Ga0070683_100058334 3300005329 Bacteria 3586
7 Ga0070670_100385164 3300005331 Bacteria 1236
8 Ga0068869_100006139 3300005334 Bacteria 7604
9 Ga0070666_10013972 3300005335 Bacteria 5105
10 Ga0068868_100003254 3300005338 Bacteria 11308
11 Ga0070660_100036162 3300005339 Bacteria 3740
12 Ga0070660_100120547 3300005339 Bacteria 2093
13 Ga0070687_100015773 3300005343 Bacteria 3425
14 Ga0070661_100423608 3300005344 Bacteria 1055
15 Ga0070668_100034226 3300005347 Bacteria 3871
16 Ga0070669_100077739 3300005353 Bacteria 2466
17 Ga0070671_100135777 3300005355 Bacteria 2074
18 Ga0070659_100008739 3300005366 Bacteria 7413
19 Ga0070659_100330915 3300005366 Bacteria 1275
20 Ga0070667_100013812 3300005367 Bacteria 6676
21 Ga0070662_100000401 3300005457 Bacteria 25813
22 Ga0070698_100104468 3300005471 Bacteria 2803
23 Ga0070699_100194874 3300005518 Bacteria 1801
24 Ga0070684_100125006 3300005535 Bacteria 2316
25 Ga0068853_100046872 3300005539 Bacteria 3708
26 Ga0068853_100120912 3300005539 Bacteria 2336
27 Ga0070672_100003696 3300005543 Bacteria 9951
28 Ga0070693_100105458 3300005547 Bacteria 1724
29 Ga0068855_100047168 3300005563 Bacteria 5091
30 Ga0068855_100333534 3300005563 Bacteria 1674
31 Ga0070664_100101566 3300005564 Bacteria 2501
32 Ga0070664_100145266 3300005564 Bacteria 2091
33 Ga0068857_100017376 3300005577 Bacteria 6302
34 Ga0068857_100110424 3300005577 Bacteria 2471
35 Ga0068854_100012869 3300005578 Bacteria 5480
36 Ga0068854_100076744 3300005578 Bacteria 2457
37 Ga0070702_100216522 3300005615 Bacteria 1278
38 Ga0070702_100273088 3300005615 Bacteria 1157
39 Ga0068852_100010629 3300005616 Bacteria 6887
40 Ga0068852_100159996 3300005616 Bacteria 2102
41 Ga0068859_100161502 3300005617 Bacteria 2319
42 Ga0068864_100002256 3300005618 Bacteria 15941
43 Ga0068861_100027240 3300005719 Bacteria 4161
44 Ga0068851_10015816 3300005834 Bacteria 3601
45 Ga0068851_10019848 3300005834 Bacteria 3249
46 Ga0068863_100058639 3300005841 Bacteria 3643
47 Ga0068858_100003650 3300005842 Bacteria 15230
48 Ga0068858_100158485 3300005842 Bacteria 2131
49 Ga0068860_100006944 3300005843 Bacteria 11347
50 Ga0068862_100048238 3300005844 Bacteria 3636
51 Ga0081539_10000863 3300005985 Bacteria 58055
52 Ga0075364_10017144 3300006051 Bacteria 4520
53 Ga0075366_10031683 3300006195 Bacteria 3113
54 Ga0075430_100719283 3300006846 Bacteria 823
55 Ga0097620_100161501 3300006931 Bacteria 2319
56 Ga0105240_10532736 3300009093 Bacteria 1302
57 Ga0105245_10021346 3300009098 Bacteria 5679
58 Ga0105247_10449198 3300009101 Bacteria 929
59 Ga0105243_10317658 3300009148 Bacteria 1418
60 Ga0105243_10332953 3300009148 Bacteria 1387
61 Ga0105241_10082327 3300009174 Bacteria 2522
62 Ga0105248_10003707 3300009177 Bacteria 16936
63 Ga0105248_10078397 3300009177 Bacteria 3713
64 Ga0105237_10021011 3300009545 Bacteria 6718
65 Ga0105238_10019048 3300009551 Bacteria 6992
66 Ga0105249_10243425 3300009553 Bacteria 1779
67 Ga0105239_10039468 3300010375 Bacteria 5173
68 Ga0157373_10073476 3300013100 Bacteria 2413
69 Ga0157371_10177803 3300013102 Bacteria 1521
70 Ga0157371_10343253 3300013102 Bacteria 1086
71 Ga0157370_10012300 3300013104 Bacteria 8882
72 Ga0157370_10431077 3300013104 Bacteria 1213
73 Ga0157369_10000103 3300013105 Bacteria 118273
74 Ga0157369_10289037 3300013105 Bacteria 1707
75 Ga0157374_10017756 3300013296 Bacteria 6269
76 Ga0157374_10352676 3300013296 Bacteria 1462
77 Ga0163162_10010692 3300013306 Bacteria 8926
78 Ga0163162_10081729 3300013306 Bacteria 3302
79 Ga0157372_10010699 3300013307 Bacteria 9764
80 Ga0157375_10014632 3300013308 Bacteria 7008
81 Ga0157375_10065578 3300013308 Bacteria 3620
82 Ga0157380_10023678 3300014326 Bacteria 4635
83 Ga0157380_11180678 3300014326 Bacteria 808
84 Ga0157379_10004211 3300014968 Bacteria 12286
85 Ga0157379_10012937 3300014968 Bacteria 7300
86 Ga0163161_10002762 3300017792 Bacteria 12481
87 Ga0209759_1016062 3300025256 Bacteria 1906
88 Ga0207697_10103747 3300025315 Bacteria 1213
89 Ga0207656_10044121 3300025321 Bacteria 1903
90 Ga0207688_10006444 3300025901 Bacteria 6391
91 Ga0207680_10019279 3300025903 Bacteria 3645
92 Ga0207645_10016294 3300025907 Bacteria 4921
93 Ga0207695_10780645 3300025913 Bacteria 835
94 Ga0207671_10039490 3300025914 Bacteria 3494
95 Ga0207662_10091447 3300025918 Bacteria 1872
96 Ga0207657_10031091 3300025919 Bacteria 4840
97 Ga0207649_10027677 3300025920 Bacteria 3329
98 Ga0207694_10045897 3300025924 Bacteria 3376
99 Ga0207659_10011475 3300025926 Bacteria 5599
100 Ga0207687_10015758 3300025927 Bacteria 4961
101 Ga0207644_10725720 3300025931 Bacteria 829
102 Ga0207690_10265954 3300025932 Bacteria 1330
103 Ga0207706_10001117 3300025933 Bacteria 27298
104 Ga0207709_10024053 3300025935 Bacteria 3474
105 Ga0207709_10252197 3300025935 Bacteria 1289
106 Ga0207691_10024332 3300025940 Bacteria 5695
107 Ga0207711_10028299 3300025941 Bacteria 4715
108 Ga0207711_10080443 3300025941 Bacteria 2846
109 Ga0207689_10000207 3300025942 Bacteria 52064
110 Ga0207661_10184425 3300025944 Bacteria 1825
111 Ga0207661_10541222 3300025944 Bacteria 1066
112 Ga0207679_10024624 3300025945 Bacteria 4128
113 Ga0207679_10215079 3300025945 Bacteria 1614
114 Ga0207712_10261779 3300025961 Bacteria 1403
115 Ga0207668_10090895 3300025972 Bacteria 2242
116 Ga0207658_10015106 3300025986 Bacteria 5295
117 Ga0207658_10099134 3300025986 Bacteria 2278
118 Ga0207677_11094409 3300026023 Bacteria 726
119 Ga0207703_10011588 3300026035 Bacteria 6855
120 Ga0207639_10017291 3300026041 Bacteria 5112
121 Ga0207639_10038755 3300026041 Bacteria 3547
122 Ga0207639_10048633 3300026041 Bacteria 3211
123 Ga0207702_10109760 3300026078 Bacteria 2450
124 Ga0207641_10014443 3300026088 Bacteria 6470
125 Ga0207641_10074787 3300026088 Bacteria 2923
126 Ga0207676_10008757 3300026095 Bacteria 7198
127 Ga0207674_10021617 3300026116 Bacteria 6926
128 Ga0207674_10033792 3300026116 Bacteria 5351
129 Ga0207674_10355969 3300026116 Bacteria 1415
130 Ga0207675_100000939 3300026118 Bacteria 29113
131 Ga0207683_10088908 3300026121 Bacteria 2749
132 Ga0207698_10004772 3300026142 Bacteria 8296
133 Ga0207698_10060743 3300026142 Bacteria 2941
134 Ga0268265_10047333 3300028380 Bacteria 3222
135 Ga0268265_10359528 3300028380 Bacteria 1332
136 Ga0268264_10004780 3300028381 Bacteria 11495
137 Ga0307508_10213475 3300031616 Bacteria 1530
138 Ga0307406_10017737 3300031901 Bacteria 4149
139 Ga0307414_10181831 3300032004 Bacteria 1692
140 Ga0373952_0029143 3300035092 Bacteria 1215
141 Ga0373931_0022898 3300035691 Bacteria 3148
142 Ga0373927_0094085 3300035695 Bacteria 1947
143 Ga0373925_0342727 3300037068 Bacteria 1212
144 Ga0395905_0006995 3300037471 Bacteria 11277
145 Ga0395901_0138683 3300038443 Bacteria 2556
146 Ga0451793_1395209 3300041452 Bacteria 4357
147 Ga0451797_0251710 3300041453 Bacteria 1070
148 Ga0451843_1332343 3300041509 Bacteria 1177
149 Ga0451853_0983041 3300041512 Bacteria 905
150 Ga0466965_0232384 3300044683 Bacteria 985
151 Ga0453684_0156114 3300044712 Bacteria 2705
152 Ga0466970_0091366 3300044765 Bacteria 1652
153 Ga0451576_0064632 3300045051 Bacteria 3811
154 Ga0451576_0173277 3300045051 Bacteria 2252
155 Ga0495627_001410 3300046453 Bacteria 14202
156 Ga0495650_0085124 3300046471 Bacteria 1212
157 Ga0495580_0221805 3300046472 Bacteria 1299
158 Ga0495586_0048581 3300046535 Bacteria 2293
159 Ga0495613_0236939 3300046689 Bacteria 1277
160 Ga0495686_0433159 3300047472 Bacteria 701
161 Ga0496102_0092619 3300048905 Bacteria 2799
162 Ga0496102_0260529 3300048905 Bacteria 1635
163 Ga0496103_0141371 3300048906 Bacteria 1539
164 Ga0496104_0078158 3300048907 Bacteria 3153
165 Ga0496104_0273057 3300048907 Bacteria 1603
166 Ga0496104_0452876 3300048907 Bacteria 1195
167 Ga0496105_0093170 3300048908 Bacteria 2487
168 Ga0496106_0001420 3300048909 Bacteria 17964
169 Ga0496107_0032349 3300048910 Bacteria 3738
170 Ga0496108_0023598 3300048911 Bacteria 5063
171 Ga0496109_0019481 3300048912 Bacteria 5987
172 Ga0496109_0237094 3300048912 Bacteria 1716
173 Ga0496110_0018062 3300048913 Bacteria 5907
174 Ga0496111_0347861 3300048914 Bacteria 1097
175 Ga0496112_0004827 3300048915 Bacteria 11511
176 Ga0496112_0047212 3300048915 Bacteria 4225
177 Ga0496113_0013259 3300048916 Bacteria 5577
178 Ga0496113_0249954 3300048916 Bacteria 1415
179 Ga0496113_0428087 3300048916 Bacteria 1063
180 Ga0496114_0061508 3300048917 Bacteria 3141
181 Ga0496115_0002991 3300048918 Bacteria 12136
182 Ga0496117_0000254 3300048920 Bacteria 101006
183 Ga0496117_0000808 3300048920 Bacteria 48592
184 Ga0496118_0008340 3300048921 Bacteria 10729
185 Ga0496122_0013900 3300048925 Bacteria 7831
186 Ga0496122_0045795 3300048925 Bacteria 3395
187 Ga0496125_0001828 3300048928 Bacteria 29377
188 Ga0496125_0011945 3300048928 Bacteria 8649
189 Ga0496125_0017472 3300048928 Bacteria 6834
190 Ga0496125_0034149 3300048928 Bacteria 4487
191 Ga0496125_0037943 3300048928 Bacteria 4181
192 Ga0496126_0000912 3300048929 Bacteria 51111
193 Ga0496126_0168344 3300048929 Bacteria 1869
194 Ga0501294_001105 3300049517 Bacteria 2817
195 Ga0501031_0025899 3300049568 Bacteria 3826
196 Ga0501032_0011157 3300049569 Bacteria 6456
197 Ga0501034_0121733 3300049571 Bacteria 2595
198 Ga0501034_0256950 3300049571 Bacteria 1690
199 Ga0501036_0001791 3300049572 Bacteria 16674
200 Ga0501036_0004996 3300049572 Bacteria 10730
201 Ga0501038_0010213 3300049574 Bacteria 8592
202 Ga0501039_0002491 3300049575 Bacteria 13709
203 Ga0501040_0005300 3300049576 Bacteria 8338
204 Ga0501041_0002264 3300049577 Bacteria 10879
205 Ga0501043_0106034 3300049579 Bacteria 2207
206 Ga0501046_0017182 3300049580 Bacteria 6045
207 Ga0501047_0031496 3300049581 Bacteria 5114
208 Ga0501048_0022103 3300049582 Bacteria 4654
209 Ga0501069_0003761 3300049585 Bacteria 7803
210 Ga0501069_0142433 3300049585 Bacteria 1375
211 Ga0501070_0009840 3300049586 Bacteria 8084
212 Ga0501071_0022722 3300049587 Bacteria 4374
213 Ga0501072_0014139 3300049588 Bacteria 6115
214 Ga0501074_0013463 3300049590 Bacteria 5947
215 Ga0501075_0010374 3300049591 Bacteria 6546
216 Ga0501076_0091116 3300049592 Bacteria 2453
217 Ga0501077_0004701 3300049593 Bacteria 8302
218 Ga0501199_033663 3300049650 Bacteria 641
219 Ga0501079_0005156 3300049741 Bacteria 9712
220 Ga0501080_0080253 3300049742 Bacteria 3032
221 Ga0501083_0261258 3300049744 Bacteria 1126
222 Ga0501035_0456026 3300049822 Bacteria 1057
223 Ga0501044_0171987 3300049823 Bacteria 2137
224 Ga0501045_0008339 3300049824 Bacteria 7217
225 nmdc:mga00v17_9251_c1 3300050491 Bacteria 5325
226 nmdc:mga0k408_110998_c1 3300050493 Unclassified 1621
227 nmdc:mga0qj67_206516_c1 3300050509 Bacteria 1235
228 nmdc:mga0rr50_176659_c1 3300050513 Bacteria 1743
229 Ga0500650_0001306 3300053098 Bacteria 7400
230 Ga0500559_0000435 3300053136 Bacteria 29604
231 Ga0500573_0067185 3300053140 Bacteria 2049
232 Ga0500577_0001521 3300053142 Bacteria 5905
233 Ga0500577_0008224 3300053142 Bacteria 2964
234 Ga0500616_0000079 3300053153 Bacteria 200717
235 Ga0501084_0268508 3300054114 Bacteria 1440
236 Ga0501082_0008263 3300060353 Bacteria 8976
237 Ga0530510_0003661 3300061734 Bacteria 10584

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0156114 Ga0453684_0156114_2155_2694 158
2 3300049742 Ga0501080_0080253 Ga0501080_0080253_126_674 169
3 3300049822 Ga0501035_0456026 Ga0501035_0456026_25_663 176
4 3300054114 Ga0501084_0268508 Ga0501084_0268508_761_1399 176
5 3300025935 Ga0207709_10252197 Ga0207709_102521971 179
6 3300005471 Ga0070698_100104468 Ga0070698_1001044684 181
7 3300005335 Ga0070666_10013972 Ga0070666_100139724 182
8 3300005343 Ga0070687_100015773 Ga0070687_1000157733 182
9 3300005366 Ga0070659_100330915 Ga0070659_1003309152 182
10 3300005367 Ga0070667_100013812 Ga0070667_1000138126 182
11 3300005543 Ga0070672_100003696 Ga0070672_1000036962 182
12 3300005615 Ga0070702_100273088 Ga0070702_1002730882 182
13 3300005616 Ga0068852_100159996 Ga0068852_1001599962 182
14 3300005617 Ga0068859_100161502 Ga0068859_1001615023 182
15 3300005842 Ga0068858_100003650 Ga0068858_1000036507 182
16 3300005843 Ga0068860_100006944 Ga0068860_1000069448 182
17 3300006931 Ga0097620_100161501 Ga0097620_1001615013 182
18 3300009101 Ga0105247_10449198 Ga0105247_104491982 182
19 3300009148 Ga0105243_10317658 Ga0105243_103176582 182
20 3300009177 Ga0105248_10078397 Ga0105248_100783971 182
21 3300013306 Ga0163162_10081729 Ga0163162_100817292 182
22 3300013308 Ga0157375_10014632 Ga0157375_100146323 182
23 3300014326 Ga0157380_10023678 Ga0157380_100236784 182
24 3300014968 Ga0157379_10012937 Ga0157379_100129374 182
25 3300025903 Ga0207680_10019279 Ga0207680_100192794 182
26 3300025918 Ga0207662_10091447 Ga0207662_100914472 182
27 3300025940 Ga0207691_10024332 Ga0207691_100243324 182
28 3300025941 Ga0207711_10080443 Ga0207711_100804432 182
29 3300025986 Ga0207658_10015106 Ga0207658_100151065 182
30 3300026035 Ga0207703_10011588 Ga0207703_100115886 182
31 3300026041 Ga0207639_10048633 Ga0207639_100486333 182
32 3300026142 Ga0207698_10060743 Ga0207698_100607434 182
33 3300028381 Ga0268264_10004780 Ga0268264_100047808 182
34 3300045051 Ga0451576_0173277 Ga0451576_0173277_731_1402 182
35 3300049650 Ga0501199_033663 Ga0501199_033663_20_628 182
36 3300031616 Ga0307508_10213475 Ga0307508_102134752 183
37 3300025315 Ga0207697_10103747 Ga0207697_101037471 191
38 3300035691 Ga0373931_0022898 Ga0373931_0022898_2460_3128 192
39 3300046453 Ga0495627_001410 Ga0495627_001410_10830_11483 192
40 3300037471 Ga0395905_0006995 Ga0395905_0006995_4903_5571 193
41 3300046535 Ga0495586_0048581 Ga0495586_0048581_271_915 193
42 iso_pu_bacteria 8046352972 8046355437 194
43 3300025256 Ga0209759_1016062 Ga0209759_10160623 195
44 iso_pu_bacteria 2515154155 2515857448 195
45 iso_pu_bacteria 2643221549 2643766251 195
46 iso_pu_bacteria 2996221748 2996221934 195
47 iso_pu_bacteria 8003830390 8003835425 195
48 3300009093 Ga0105240_10532736 Ga0105240_105327362 196
49 3300025913 Ga0207695_10780645 Ga0207695_107806452 196
50 3300049569 Ga0501032_0011157 Ga0501032_0011157_204_815 196
51 3300049571 Ga0501034_0256950 Ga0501034_0256950_32_643 196
52 3300049572 Ga0501036_0001791 Ga0501036_0001791_7059_7670 196
53 3300049574 Ga0501038_0010213 Ga0501038_0010213_6140_6751 196
54 3300049579 Ga0501043_0106034 Ga0501043_0106034_1113_1724 196
55 3300049580 Ga0501046_0017182 Ga0501046_0017182_1542_2153 196
56 3300049581 Ga0501047_0031496 Ga0501047_0031496_32_643 196
57 3300049582 Ga0501048_0022103 Ga0501048_0022103_1020_1631 196
58 3300049585 Ga0501069_0003761 Ga0501069_0003761_5081_5692 196
59 3300049590 Ga0501074_0013463 Ga0501074_0013463_3202_3813 196
60 iso_pu_bacteria 2939660829 2939663081 196
61 3300013104 Ga0157370_10012300 Ga0157370_100123003 197
62 3300014326 Ga0157380_11180678 Ga0157380_111806782 197
63 3300044683 Ga0466965_0232384 Ga0466965_0232384_148_756 197
64 3300044765 Ga0466970_0091366 Ga0466970_0091366_806_1414 197
65 3300046471 Ga0495650_0085124 Ga0495650_0085124_422_1036 197
66 3300047472 Ga0495686_0433159 Ga0495686_0433159_28_642 197
67 3300049568 Ga0501031_0025899 Ga0501031_0025899_1600_2301 197
68 3300049572 Ga0501036_0004996 Ga0501036_0004996_1501_2202 197
69 3300049575 Ga0501039_0002491 Ga0501039_0002491_4514_5215 197
70 3300049576 Ga0501040_0005300 Ga0501040_0005300_3263_3964 197
71 3300049577 Ga0501041_0002264 Ga0501041_0002264_7617_8318 197
72 3300049587 Ga0501071_0022722 Ga0501071_0022722_2509_3210 197
73 3300049588 Ga0501072_0014139 Ga0501072_0014139_754_1455 197
74 3300049591 Ga0501075_0010374 Ga0501075_0010374_4490_5191 197
75 3300049592 Ga0501076_0091116 Ga0501076_0091116_644_1345 197
76 3300049593 Ga0501077_0004701 Ga0501077_0004701_2355_3056 197
77 3300049741 Ga0501079_0005156 Ga0501079_0005156_4704_5405 197
78 3300049744 Ga0501083_0261258 Ga0501083_0261258_517_1116 197
79 3300049824 Ga0501045_0008339 Ga0501045_0008339_1649_2350 197
80 3300053098 Ga0500650_0001306 Ga0500650_0001306_628_1338 197
81 3300053140 Ga0500573_0067185 Ga0500573_0067185_518_1135 197
82 3300053142 Ga0500577_0001521 Ga0500577_0001521_1591_2301 197
83 3300060353 Ga0501082_0008263 Ga0501082_0008263_7678_8379 197
84 3300061734 Ga0530510_0003661 Ga0530510_0003661_1371_2072 197
85 iso_pu_bacteria 2643221553 2643784717 197
86 iso_pu_bacteria 2808606368 2808884063 197
87 iso_pu_bacteria 2870622029 2870622398 197
88 iso_pu_bacteria 2939657138 2939658435 197
89 iso_pu_bacteria 2977264416 2977265400 197
90 iso_pu_bacteria 8057345674 8057348008 197
91 3300013105 Ga0157369_10000103 Ga0157369_1000010336 198
92 3300041452 Ga0451793_1395209 Ga0451793_1395209_30_659 198
93 3300041453 Ga0451797_0251710 Ga0451797_0251710_58_687 198
94 3300048921 Ga0496118_0008340 Ga0496118_0008340_177_821 198
95 3300048928 Ga0496125_0034149 Ga0496125_0034149_3437_4069 198
96 3300049517 Ga0501294_001105 Ga0501294_001105_864_1532 198
97 3300053136 Ga0500559_0000435 Ga0500559_0000435_22632_23249 198
98 iso_pu_bacteria 8004212874 8004214984 198
99 3300003320 rootH2_10070337 rootH2_100703375 199
100 3300005288 Ga0065714_10004785 Ga0065714_100047855 199
101 3300005339 Ga0070660_100120547 Ga0070660_1001205472 199
102 3300005539 Ga0068853_100120912 Ga0068853_1001209124 199
103 3300005563 Ga0068855_100333534 Ga0068855_1003335342 199
104 3300006051 Ga0075364_10017144 Ga0075364_100171442 199
105 3300009148 Ga0105243_10332953 Ga0105243_103329532 199
106 3300013102 Ga0157371_10343253 Ga0157371_103432532 199
107 3300013296 Ga0157374_10352676 Ga0157374_103526762 199
108 3300025935 Ga0207709_10024053 Ga0207709_100240532 199
109 3300025986 Ga0207658_10099134 Ga0207658_100991342 199
110 3300026116 Ga0207674_10355969 Ga0207674_103559692 199
111 3300031901 Ga0307406_10017737 Ga0307406_100177374 199
112 3300038443 Ga0395901_0138683 Ga0395901_0138683_80_700 199
113 3300041509 Ga0451843_1332343 Ga0451843_1332343_120_746 199
114 3300046472 Ga0495580_0221805 Ga0495580_0221805_418_1044 199
115 3300048905 Ga0496102_0092619 Ga0496102_0092619_802_1428 199
116 3300048906 Ga0496103_0141371 Ga0496103_0141371_263_889 199
117 3300048915 Ga0496112_0004827 Ga0496112_0004827_2512_3138 199
118 3300048916 Ga0496113_0428087 Ga0496113_0428087_137_763 199
119 3300048920 Ga0496117_0000254 Ga0496117_0000254_40823_41461 199
120 3300048920 Ga0496117_0000808 Ga0496117_0000808_17417_18067 199
121 3300048925 Ga0496122_0013900 Ga0496122_0013900_3684_4331 199
122 3300048925 Ga0496122_0045795 Ga0496122_0045795_1564_2220 199
123 3300048928 Ga0496125_0001828 Ga0496125_0001828_4972_5598 199
124 3300048928 Ga0496125_0011945 Ga0496125_0011945_4039_4686 199
125 3300048928 Ga0496125_0017472 Ga0496125_0017472_3887_4537 199
126 3300048928 Ga0496125_0037943 Ga0496125_0037943_2300_2956 199
127 3300048929 Ga0496126_0000912 Ga0496126_0000912_4137_4787 199
128 3300048929 Ga0496126_0168344 Ga0496126_0168344_840_1487 199
129 3300049571 Ga0501034_0121733 Ga0501034_0121733_1145_1762 199
130 3300049585 Ga0501069_0142433 Ga0501069_0142433_252_869 199
131 3300049586 Ga0501070_0009840 Ga0501070_0009840_3680_4297 199
132 3300050491 nmdc:mga00v17_9251_c1 nmdc:mga00v17_9251_c1_2696_3346 199
133 3300053142 Ga0500577_0008224 Ga0500577_0008224_1134_1772 199
134 3300053153 Ga0500616_0000079 Ga0500616_0000079_151338_152018 199
135 iso_pu_bacteria 2852663356 2852663639 199
136 iso_pu_bacteria 2857723135 2857726442 199
137 iso_pu_bacteria 2946080515 2946083609 199
138 3300005329 Ga0070683_100003578 Ga0070683_1000035783 200
139 3300005331 Ga0070670_100385164 Ga0070670_1003851642 200
140 3300005344 Ga0070661_100423608 Ga0070661_1004236082 200
141 3300005535 Ga0070684_100125006 Ga0070684_1001250063 200
142 3300005547 Ga0070693_100105458 Ga0070693_1001054582 200
143 3300005564 Ga0070664_100101566 Ga0070664_1001015663 200
144 3300005577 Ga0068857_100110424 Ga0068857_1001104243 200
145 3300005578 Ga0068854_100012869 Ga0068854_1000128697 200
146 3300005616 Ga0068852_100010629 Ga0068852_1000106295 200
147 3300005834 Ga0068851_10015816 Ga0068851_100158162 200
148 3300006195 Ga0075366_10031683 Ga0075366_100316836 200
149 3300013100 Ga0157373_10073476 Ga0157373_100734762 200
150 3300013102 Ga0157371_10177803 Ga0157371_101778032 200
151 3300013104 Ga0157370_10431077 Ga0157370_104310772 200
152 3300025924 Ga0207694_10045897 Ga0207694_100458971 200
153 3300025932 Ga0207690_10265954 Ga0207690_102659542 200
154 3300025944 Ga0207661_10184425 Ga0207661_101844251 200
155 3300025945 Ga0207679_10024624 Ga0207679_100246244 200
156 3300026041 Ga0207639_10038755 Ga0207639_100387554 200
157 3300026078 Ga0207702_10109760 Ga0207702_101097602 200
158 3300026088 Ga0207641_10074787 Ga0207641_100747872 200
159 3300026116 Ga0207674_10033792 Ga0207674_100337924 200
160 3300032004 Ga0307414_10181831 Ga0307414_101818312 200
161 3300041512 Ga0451853_0983041 Ga0451853_0983041_117_770 200
162 3300046689 Ga0495613_0236939 Ga0495613_0236939_368_982 200
163 3300048907 Ga0496104_0273057 Ga0496104_0273057_920_1573 200
164 3300048907 Ga0496104_0452876 Ga0496104_0452876_449_1102 200
165 3300048908 Ga0496105_0093170 Ga0496105_0093170_1065_1718 200
166 3300048912 Ga0496109_0237094 Ga0496109_0237094_860_1513 200
167 3300048914 Ga0496111_0347861 Ga0496111_0347861_221_886 200
168 3300048916 Ga0496113_0249954 Ga0496113_0249954_37_690 200
169 3300049823 Ga0501044_0171987 Ga0501044_0171987_969_1595 200
170 3300050493 nmdc:mga0k408_110998_c1 nmdc:mga0k408_110998_c1_693_1310 200
171 iso_pu_bacteria 2833709550 2833712707 200
172 3300003203 JGI25406J46586_10032322 JGI25406J46586_100323222 201
173 3300005328 Ga0070676_10016571 Ga0070676_100165714 201
174 3300005329 Ga0070683_100058334 Ga0070683_1000583343 201
175 3300005334 Ga0068869_100006139 Ga0068869_1000061393 201
176 3300005338 Ga0068868_100003254 Ga0068868_10000325411 201
177 3300005339 Ga0070660_100036162 Ga0070660_1000361624 201
178 3300005347 Ga0070668_100034226 Ga0070668_1000342264 201
179 3300005353 Ga0070669_100077739 Ga0070669_1000777393 201
180 3300005355 Ga0070671_100135777 Ga0070671_1001357773 201
181 3300005366 Ga0070659_100008739 Ga0070659_1000087397 201
182 3300005457 Ga0070662_100000401 Ga0070662_10000040119 201
183 3300005518 Ga0070699_100194874 Ga0070699_1001948742 201
184 3300005539 Ga0068853_100046872 Ga0068853_1000468723 201
185 3300005563 Ga0068855_100047168 Ga0068855_1000471684 201
186 3300005564 Ga0070664_100145266 Ga0070664_1001452663 201
187 3300005577 Ga0068857_100017376 Ga0068857_1000173762 201
188 3300005578 Ga0068854_100076744 Ga0068854_1000767443 201
189 3300005615 Ga0070702_100216522 Ga0070702_1002165222 201
190 3300005618 Ga0068864_100002256 Ga0068864_10000225613 201
191 3300005719 Ga0068861_100027240 Ga0068861_1000272404 201
192 3300005834 Ga0068851_10019848 Ga0068851_100198485 201
193 3300005841 Ga0068863_100058639 Ga0068863_1000586392 201
194 3300005842 Ga0068858_100158485 Ga0068858_1001584853 201
195 3300005844 Ga0068862_100048238 Ga0068862_1000482382 201
196 3300005985 Ga0081539_10000863 Ga0081539_1000086344 201
197 3300006846 Ga0075430_100719283 Ga0075430_1007192832 201
198 3300009098 Ga0105245_10021346 Ga0105245_100213465 201
199 3300009174 Ga0105241_10082327 Ga0105241_100823273 201
200 3300009177 Ga0105248_10003707 Ga0105248_100037075 201
201 3300009545 Ga0105237_10021011 Ga0105237_100210113 201
202 3300009551 Ga0105238_10019048 Ga0105238_100190487 201
203 3300009553 Ga0105249_10243425 Ga0105249_102434252 201
204 3300010375 Ga0105239_10039468 Ga0105239_100394682 201
205 3300013105 Ga0157369_10289037 Ga0157369_102890372 201
206 3300013296 Ga0157374_10017756 Ga0157374_100177564 201
207 3300013306 Ga0163162_10010692 Ga0163162_100106925 201
208 3300013307 Ga0157372_10010699 Ga0157372_100106992 201
209 3300013308 Ga0157375_10065578 Ga0157375_100655785 201
210 3300014968 Ga0157379_10004211 Ga0157379_1000421112 201
211 3300017792 Ga0163161_10002762 Ga0163161_100027627 201
212 3300025321 Ga0207656_10044121 Ga0207656_100441212 201
213 3300025901 Ga0207688_10006444 Ga0207688_100064446 201
214 3300025907 Ga0207645_10016294 Ga0207645_100162944 201
215 3300025914 Ga0207671_10039490 Ga0207671_100394903 201
216 3300025919 Ga0207657_10031091 Ga0207657_100310915 201
217 3300025920 Ga0207649_10027677 Ga0207649_100276774 201
218 3300025926 Ga0207659_10011475 Ga0207659_100114755 201
219 3300025927 Ga0207687_10015758 Ga0207687_100157585 201
220 3300025931 Ga0207644_10725720 Ga0207644_107257201 201
221 3300025933 Ga0207706_10001117 Ga0207706_1000111714 201
222 3300025941 Ga0207711_10028299 Ga0207711_100282993 201
223 3300025942 Ga0207689_10000207 Ga0207689_1000020716 201
224 3300025944 Ga0207661_10541222 Ga0207661_105412221 201
225 3300025945 Ga0207679_10215079 Ga0207679_102150793 201
226 3300025961 Ga0207712_10261779 Ga0207712_102617793 201
227 3300025972 Ga0207668_10090895 Ga0207668_100908952 201
228 3300026023 Ga0207677_11094409 Ga0207677_110944091 201
229 3300026041 Ga0207639_10017291 Ga0207639_100172914 201
230 3300026088 Ga0207641_10014443 Ga0207641_100144437 201
231 3300026095 Ga0207676_10008757 Ga0207676_100087574 201
232 3300026116 Ga0207674_10021617 Ga0207674_100216175 201
233 3300026118 Ga0207675_100000939 Ga0207675_10000093913 201
234 3300026121 Ga0207683_10088908 Ga0207683_100889083 201
235 3300026142 Ga0207698_10004772 Ga0207698_100047725 201
236 3300028380 Ga0268265_10047333 Ga0268265_100473332 201
237 3300028380 Ga0268265_10359528 Ga0268265_103595282 201
238 3300035092 Ga0373952_0029143 Ga0373952_0029143_24_692 201
239 3300035695 Ga0373927_0094085 Ga0373927_0094085_496_1164 201
240 3300037068 Ga0373925_0342727 Ga0373925_0342727_380_1048 201
241 3300045051 Ga0451576_0064632 Ga0451576_0064632_2634_3302 201
242 3300048905 Ga0496102_0260529 Ga0496102_0260529_629_1297 201
243 3300048907 Ga0496104_0078158 Ga0496104_0078158_794_1462 201
244 3300048909 Ga0496106_0001420 Ga0496106_0001420_2873_3541 201
245 3300048910 Ga0496107_0032349 Ga0496107_0032349_2398_3066 201
246 3300048911 Ga0496108_0023598 Ga0496108_0023598_2035_2703 201
247 3300048912 Ga0496109_0019481 Ga0496109_0019481_3898_4566 201
248 3300048913 Ga0496110_0018062 Ga0496110_0018062_1553_2221 201
249 3300048915 Ga0496112_0047212 Ga0496112_0047212_2832_3500 201
250 3300048916 Ga0496113_0013259 Ga0496113_0013259_3302_3970 201
251 3300048917 Ga0496114_0061508 Ga0496114_0061508_2271_2939 201
252 3300048918 Ga0496115_0002991 Ga0496115_0002991_4396_5064 201
253 3300050509 nmdc:mga0qj67_206516_c1 nmdc:mga0qj67_206516_c1_90_758 201
254 3300050513 nmdc:mga0rr50_176659_c1 nmdc:mga0rr50_176659_c1_363_1031 201

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

33

217

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gd9-assembly1.cif.gz_B crystal structure of a putative dihydrofolate reductase (bsu40760, yyap) from bacillus subtilis at 2.30 a resolution 0.8373 2 189
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8243 1 189
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8187 1 189
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8112 1 189
7myl-assembly2.cif.gz_C crystal structure of dfra1 dihydrofolate reductase in complex with trimethoprim 0.8103 3 190
ID Description Score Start End Superfamily
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8357 2 188 3.40.430.10
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8308 2 188 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8125 1 189 3.40.430.10
1cz3B00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8022 3 195 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7994 1 189 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A530GKI4-F1-model_v4 Dihydrofolate reductase 0.9735 55 188 GO:0008703
GO:0009231
AF-A0A4R6J3A5-F1-model_v4 RibD domain-containing protein 0.9648 79 195 GO:0008703
GO:0009231
AF-A0A1G2VXK8-F1-model_v4 Riboflavin biosynthesis protein RibD 0.9635 71 190 GO:0008703
GO:0009231
AF-A0A2V7WAC4-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9609 79 192 GO:0008703
GO:0009231
AF-A0A535B5C6-F1-model_v4 Dihydrofolate reductase 0.9593 1 179 GO:0008703
GO:0009231

Feature Viewer

pLDDT pTM Quality
90.35 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map