F365251

General Info

Members Datasets Scaffolds Average Seq Length
254 158 508 419

Family's Representative Sequence

Representative Sequence 3300050513|nmdc:mga0rr50_24804_c1|nmdc:mga0rr50_24804_c1_993_2366
Length 457
Sequence MGEAHHVCDVLIVGAGPAGLAAAYRAAENGLHVLVVDDNPAAGGQIWRGEQAKPASREAQAWFERIRSAGIQLINGARVFQQPRAEALLAETASGIYELSYEKLILAAGARERFLPFPGWTLPNVMGAGGLQALVKTGLTIEGKRVIVAGSGPLLLAVAAYLRGRGADVLLIAEQASTGRLARFGLGVVRQRGKIGQAWALKKEISRKGAKAQRRGPRYLNGCWVVEARGEGKLESVMLVRGRKSWQVECDYLACGFHLVPNVELAELLGCTVDSSGVRVDEFQQTSVAQVYAAGEVTGIGGLELSLVEGEIAGLAAAGKHDVARKLFAVRHKQRRFARLLNETFALRDELKQLAQPQTIVCRCEDVTFERLRAHDSWRAAKLQTRCGMGPCQGRVCGSAVEFLFGWKPESVRPPVLPVRVESLFCHKEAQNTQMIERSLSNEDEMGGRDACDDHGF

Samples

Sample ID Description Type Environment
1 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
75 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
115 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
122 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
130 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
142 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
145 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
146 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
147 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
148 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
149 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
150 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
151 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
152 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
153 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0.39
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.18
Rhizosphere 98.03
Stem 0
Stem Tuber 0
Unclassified 7.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0rr50_24804_c1 3300050513 Bacteria 4159
2 MBSR1b_contig_7724718 2162886012 Bacteria 1430
3 rootL2_10229967 3300003322 Bacteria 3140
4 Ga0065714_10064425 3300005288 Bacteria 189652
5 Ga0065712_10003967 3300005290 Bacteria 4271
6 Ga0065712_10067727 3300005290 Bacteria 189643
7 Ga0065715_10000520 3300005293 Bacteria 22337
8 Ga0065715_10000820 3300005293 Bacteria 8509
9 Ga0065715_10122425 3300005293 Bacteria 2205
10 Ga0065707_10012818 3300005295 Bacteria 2728
11 Ga0070683_100161645 3300005329 Bacteria 2125
12 Ga0070670_100000190 3300005331 Bacteria 56382
13 Ga0070670_100133451 3300005331 Bacteria 2145
14 Ga0068869_100071519 3300005334 Bacteria 2568
15 Ga0068869_100080959 3300005334 Bacteria 2424
16 Ga0070666_10082811 3300005335 Unclassified 2194
17 Ga0070680_100061933 3300005336 Bacteria 3063
18 Ga0070682_100123917 3300005337 Unclassified 1739
19 Ga0070689_100011690 3300005340 Bacteria 6299
20 Ga0070692_10024854 3300005345 Bacteria 2948
21 Ga0070669_100219839 3300005353 Bacteria 1501
22 Ga0070671_100006739 3300005355 Bacteria 9191
23 Ga0070667_100166526 3300005367 Bacteria 1944
24 Ga0070709_10000540 3300005434 Bacteria 22135
25 Ga0070709_10028422 3300005434 Bacteria 3335
26 Ga0070714_100105829 3300005435 Bacteria 2484
27 Ga0070714_100134522 3300005435 Bacteria 2212
28 Ga0070713_100001436 3300005436 Bacteria 15282
29 Ga0070713_100016850 3300005436 Bacteria 5505
30 Ga0070710_10078699 3300005437 Bacteria 1919
31 Ga0070711_100000291 3300005439 Bacteria 26041
32 Ga0070711_100002406 3300005439 Bacteria 10676
33 Ga0070711_100019403 3300005439 Bacteria 4362
34 Ga0070711_100108949 3300005439 Bacteria 2030
35 Ga0070705_100018895 3300005440 Bacteria 3620
36 Ga0070700_100000047 3300005441 Bacteria 90040
37 Ga0070681_10017713 3300005458 Bacteria 7119
38 Ga0068867_100046118 3300005459 Unclassified 3200
39 Ga0070706_100000305 3300005467 Bacteria 59523
40 Ga0070699_100000978 3300005518 Bacteria 26634
41 Ga0070699_100149914 3300005518 Bacteria 2062
42 Ga0070679_100072340 3300005530 Bacteria 3440
43 Ga0070684_100099843 3300005535 Bacteria 2591
44 Ga0068853_100023573 3300005539 Bacteria 5153
45 Ga0068853_100049732 3300005539 Bacteria 3603
46 Ga0070693_100023856 3300005547 Bacteria 3274
47 Ga0070693_100068658 3300005547 Bacteria 2081
48 Ga0068856_100003033 3300005614 Bacteria 17203
49 Ga0068856_100013983 3300005614 Bacteria 7760
50 Ga0070702_100003608 3300005615 Bacteria 6953
51 Ga0068859_100010222 3300005617 Bacteria 9445
52 Ga0068859_100019709 3300005617 Bacteria 6774
53 Ga0068859_100023383 3300005617 Bacteria 6202
54 Ga0068859_100026874 3300005617 Bacteria 5773
55 Ga0068859_100042207 3300005617 Bacteria 4581
56 Ga0068859_100081593 3300005617 Bacteria 3276
57 Ga0068859_100256754 3300005617 Unclassified 1838
58 Ga0068864_100004701 3300005618 Bacteria 11196
59 Ga0068864_100126635 3300005618 Bacteria 2289
60 Ga0068861_100134453 3300005719 Bacteria 2011
61 Ga0068863_100052965 3300005841 Bacteria 3845
62 Ga0068858_100044248 3300005842 Bacteria 4127
63 Ga0068858_100102785 3300005842 Unclassified 2666
64 Ga0068860_100088241 3300005843 Bacteria 2952
65 Ga0068862_100300087 3300005844 Bacteria 1478
66 Ga0081539_10001529 3300005985 Bacteria 38746
67 Ga0081539_10023034 3300005985 Bacteria 4093
68 Ga0070717_10009093 3300006028 Bacteria 7459
69 Ga0070717_10060878 3300006028 Bacteria 3127
70 Ga0070717_10067707 3300006028 Bacteria 2971
71 Ga0070715_10005678 3300006163 Bacteria 4183
72 Ga0070716_100003303 3300006173 Bacteria 7581
73 Ga0070712_100002207 3300006175 Bacteria 11978
74 Ga0070712_100023342 3300006175 Bacteria 4085
75 Ga0070712_100047846 3300006175 Bacteria 2962
76 Ga0068871_100084213 3300006358 Bacteria 2639
77 Ga0075431_100324257 3300006847 Unclassified 1552
78 Ga0075433_10004469 3300006852 Bacteria 10895
79 Ga0075433_10016478 3300006852 Bacteria 6093
80 Ga0075433_10051293 3300006852 Bacteria 3592
81 Ga0075433_10259446 3300006852 Bacteria 1541
82 Ga0075434_100003010 3300006871 Bacteria 14990
83 Ga0075434_100047496 3300006871 Bacteria 4260
84 Ga0075434_100057181 3300006871 Bacteria 3876
85 Ga0075434_100189519 3300006871 Bacteria 2077
86 Ga0075436_100003351 3300006914 Bacteria 10967
87 Ga0097620_100010221 3300006931 Bacteria 9445
88 Ga0097620_100019709 3300006931 Bacteria 6774
89 Ga0097620_100023383 3300006931 Bacteria 6202
90 Ga0097620_100026873 3300006931 Bacteria 5773
91 Ga0097620_100042208 3300006931 Bacteria 4581
92 Ga0097620_100081598 3300006931 Bacteria 3276
93 Ga0097620_100256778 3300006931 Unclassified 1838
94 Ga0075435_100158079 3300007076 Bacteria 1908
95 Ga0105251_10047991 3300009011 Bacteria 2049
96 Ga0105240_10005878 3300009093 Bacteria 18173
97 Ga0111539_10025401 3300009094 Bacteria 7262
98 Ga0111539_10087530 3300009094 Bacteria 3659
99 Ga0105243_10002285 3300009148 Bacteria 16071
100 Ga0105241_10040081 3300009174 Bacteria 3535
101 Ga0105241_10070960 3300009174 Bacteria 2704
102 Ga0105241_10109493 3300009174 Bacteria 2209
103 Ga0105241_10234021 3300009174 Bacteria 1550
104 Ga0105242_10026361 3300009176 Bacteria 4607
105 Ga0105242_10179117 3300009176 Bacteria 1869
106 Ga0105248_10034742 3300009177 Bacteria 5641
107 Ga0105248_10038862 3300009177 Bacteria 5328
108 Ga0105248_10451749 3300009177 Unclassified 1448
109 Ga0105237_10000843 3300009545 Bacteria 41798
110 Ga0105237_10028407 3300009545 Bacteria 5698
111 Ga0105238_10002828 3300009551 Bacteria 17317
112 Ga0105238_10013280 3300009551 Bacteria 8312
113 Ga0105249_10057038 3300009553 Bacteria 3577
114 Ga0105249_10217847 3300009553 Bacteria 1877
115 Ga0105249_10301403 3300009553 Bacteria 1607
116 Ga0157373_10008162 3300013100 Bacteria 7783
117 Ga0157373_10053310 3300013100 Bacteria 2876
118 Ga0157373_10161618 3300013100 Bacteria 1576
119 Ga0157373_10179761 3300013100 Unclassified 1489
120 Ga0157369_10339888 3300013105 Bacteria 1560
121 Ga0157369_10382011 3300013105 Unclassified 1462
122 Ga0157378_10072303 3300013297 Bacteria 3099
123 Ga0157372_10047400 3300013307 Bacteria 4775
124 Ga0157372_10059033 3300013307 Unclassified 4290
125 Ga0157372_10095033 3300013307 Bacteria 3395
126 Ga0157372_10161943 3300013307 Bacteria 2586
127 Ga0163163_10000209 3300014325 Bacteria 60592
128 Ga0163163_10120250 3300014325 Bacteria 2660
129 Ga0163163_10130639 3300014325 Bacteria 2551
130 Ga0157380_10023612 3300014326 Bacteria 4641
131 Ga0157377_10036626 3300014745 Bacteria 2700
132 Ga0157379_10077363 3300014968 Bacteria 2979
133 Ga0157379_10341595 3300014968 Unclassified 1369
134 Ga0157376_10111678 3300014969 Bacteria 2407
135 Ga0228598_1000209 3300024227 Bacteria 10896
136 Ga0207653_10000894 3300025885 Bacteria 9903
137 Ga0207692_10061141 3300025898 Bacteria 1951
138 Ga0207692_10077920 3300025898 Bacteria 1764
139 Ga0207647_10030140 3300025904 Bacteria 3503
140 Ga0207699_10001190 3300025906 Bacteria 12317
141 Ga0207643_10054776 3300025908 Bacteria 2267
142 Ga0207684_10000053 3300025910 Bacteria 225260
143 Ga0207654_10069610 3300025911 Unclassified 2086
144 Ga0207707_10010168 3300025912 Bacteria 8166
145 Ga0207695_10009484 3300025913 Bacteria 12037
146 Ga0207671_10001210 3300025914 Bacteria 30665
147 Ga0207693_10000065 3300025915 Bacteria 91476
148 Ga0207693_10000241 3300025915 Bacteria 50544
149 Ga0207693_10040304 3300025915 Bacteria 3678
150 Ga0207693_10131218 3300025915 Bacteria 1970
151 Ga0207663_10000935 3300025916 Bacteria 13320
152 Ga0207663_10005184 3300025916 Bacteria 6555
153 Ga0207663_10076238 3300025916 Bacteria 2178
154 Ga0207662_10101456 3300025918 Bacteria 1783
155 Ga0207657_10139008 3300025919 Unclassified 1985
156 Ga0207694_10025335 3300025924 Bacteria 4508
157 Ga0207650_10000007 3300025925 Bacteria 530810
158 Ga0207650_10035572 3300025925 Bacteria 3618
159 Ga0207650_10103377 3300025925 Bacteria 2196
160 Ga0207659_10064626 3300025926 Unclassified 2649
161 Ga0207700_10001772 3300025928 Bacteria 12238
162 Ga0207700_10070177 3300025928 Bacteria 2692
163 Ga0207700_10129692 3300025928 Bacteria 2057
164 Ga0207700_10215610 3300025928 Bacteria 1625
165 Ga0207644_10002902 3300025931 Bacteria 11043
166 Ga0207690_10105443 3300025932 Bacteria 2021
167 Ga0207686_10055438 3300025934 Bacteria 2487
168 Ga0207670_10001523 3300025936 Bacteria 12188
169 Ga0207691_10014923 3300025940 Bacteria 7402
170 Ga0207711_10090566 3300025941 Bacteria 2689
171 Ga0207689_10038574 3300025942 Bacteria 3956
172 Ga0207689_10083170 3300025942 Bacteria 2632
173 Ga0207679_10290042 3300025945 Bacteria 1406
174 Ga0207712_10067809 3300025961 Bacteria 2554
175 Ga0207640_10047401 3300025981 Bacteria 2772
176 Ga0207703_10036835 3300026035 Bacteria 3895
177 Ga0207703_10159264 3300026035 Bacteria 1976
178 Ga0207703_10211339 3300026035 Bacteria 1730
179 Ga0207678_10002856 3300026067 Bacteria 15675
180 Ga0207708_10000113 3300026075 Bacteria 62692
181 Ga0207708_10033466 3300026075 Bacteria 3905
182 Ga0207702_10002870 3300026078 Bacteria 16118
183 Ga0207641_10126464 3300026088 Bacteria 2289
184 Ga0207641_10293667 3300026088 Bacteria 1533
185 Ga0207648_10073244 3300026089 Bacteria 2986
186 Ga0207676_10014396 3300026095 Bacteria 5690
187 Ga0207676_10125081 3300026095 Bacteria 2176
188 Ga0207674_10001248 3300026116 Bacteria 33233
189 Ga0207674_10056973 3300026116 Bacteria 3964
190 Ga0207674_10197246 3300026116 Bacteria 1963
191 Ga0207675_100006726 3300026118 Bacteria 10871
192 Ga0207675_100119484 3300026118 Bacteria 2493
193 Ga0207675_100129568 3300026118 Bacteria 2392
194 Ga0207428_10009063 3300027907 Bacteria 8949
195 Ga0268265_10073172 3300028380 Bacteria 2676
196 Ga0265338_10004213 3300028800 Bacteria 19601
197 Ga0265762_1000702 3300030760 Bacteria 5920
198 Ga0307408_100182997 3300031548 Bacteria 1682
199 Ga0307406_10000949 3300031901 Bacteria 16238
200 Ga0307416_100018088 3300032002 Bacteria 4954
201 Ga0307414_10036796 3300032004 Bacteria 3271
202 Ga0307414_10056296 3300032004 Bacteria 2758
203 Ga0307414_10201350 3300032004 Unclassified 1620
204 Ga0307415_100027870 3300032126 Bacteria 3585
205 Ga0373939_0020088 3300035114 Bacteria 1810
206 Ga0373931_0019667 3300035691 Bacteria 3372
207 Ga0373935_0112184 3300035692 Bacteria 1811
208 Ga0373947_0138739 3300035725 Bacteria 1558
209 Ga0373937_0187119 3300036401 Bacteria 1945
210 Ga0373925_0010038 3300037068 Bacteria 6878
211 Ga0395900_0101090 3300037418 Bacteria 2961
212 Ga0395901_0225882 3300038443 Bacteria 1956
213 Ga0436365_1617806 3300039437 Unclassified 2955
214 Ga0439458_0015265 3300042157 Bacteria 1739
215 Ga0466959_0137645 3300045049 Bacteria 1728
216 Ga0466967_0269452 3300045976 Bacteria 1631
217 Ga0495580_0033793 3300046472 Bacteria 3683
218 Ga0495639_0013516 3300046475 Bacteria 3527
219 Ga0495664_0080038 3300046477 Bacteria 1958
220 Ga0495586_0058678 3300046535 Bacteria 2090
221 Ga0495645_0084737 3300046543 Bacteria 2269
222 Ga0496102_0105025 3300048905 Bacteria 2628
223 Ga0496103_0064413 3300048906 Bacteria 2285
224 Ga0496107_0074668 3300048910 Bacteria 2467
225 Ga0501298_014540 3300049521 Bacteria 1407
226 Ga0501299_004362 3300049522 Bacteria 2109
227 Ga0501038_0019127 3300049574 Bacteria 6177
228 Ga0501198_004759 3300049649 Bacteria 1893
229 Ga0501199_001363 3300049650 Bacteria 2199
230 Ga0501209_004302 3300049656 Bacteria 2456
231 Ga0501217_006130 3300049661 Bacteria 2542
232 Ga0501223_007645 3300049663 Bacteria 2211
233 Ga0501227_003485 3300049665 Bacteria 3414
234 Ga0501247_001301 3300049677 Bacteria 2362
235 Ga0501225_0008318 3300049705 Bacteria 2982
236 Ga0501234_001166 3300049707 Bacteria 4145
237 Ga0501279_006252 3300049775 Bacteria 1573
238 nmdc:mga06r32_354332_c1 3300050510 Bacteria 1452
239 nmdc:mga08y16_2741_c1 3300050511 Bacteria 18062
240 nmdc:mga0n895_17724_c1 3300050512 Bacteria 6571
241 nmdc:mga0n895_21279_c1 3300050512 Bacteria 6061
242 nmdc:mga0n895_86932_c1 3300050512 Bacteria 3123
243 nmdc:mga0n895_99848_c1 3300050512 Bacteria 2911
244 nmdc:mga0rr50_155782_c1 3300050513 Bacteria 1850
245 nmdc:mga08x19_119845_c1 3300050514 Unclassified 1763
246 nmdc:mga08x19_3217_c1 3300050514 Bacteria 9793
247 nmdc:mga08x19_488_c1 3300050514 Bacteria 26373
248 nmdc:mga0a205_108836_c1 3300050515 Bacteria 2670
249 nmdc:mga0a205_122679_c1 3300050515 Bacteria 2498
250 nmdc:mga0a205_147164_c1 3300050515 Bacteria 2256
251 nmdc:mga0a205_16387_c1 3300050515 Bacteria 6943
252 nmdc:mga0a205_167817_c1 3300050515 Bacteria 2090
253 nmdc:mga0a205_30536_c1 3300050515 Bacteria 2618
254 nmdc:mga0a205_5488_c1 3300050515 Bacteria 11420
255 nmdc:mga0rr50_24804_c1
256 MBSR1b_contig_7724718
257 rootL2_10229967
258 Ga0065714_10064425
259 Ga0065712_10003967
260 Ga0065712_10067727
261 Ga0065715_10000520
262 Ga0065715_10000820
263 Ga0065715_10122425
264 Ga0065707_10012818
265 Ga0070683_100161645
266 Ga0070670_100000190
267 Ga0070670_100133451
268 Ga0068869_100071519
269 Ga0068869_100080959
270 Ga0070666_10082811
271 Ga0070680_100061933
272 Ga0070682_100123917
273 Ga0070689_100011690
274 Ga0070692_10024854
275 Ga0070669_100219839
276 Ga0070671_100006739
277 Ga0070667_100166526
278 Ga0070709_10000540
279 Ga0070709_10028422
280 Ga0070714_100105829
281 Ga0070714_100134522
282 Ga0070713_100001436
283 Ga0070713_100016850
284 Ga0070710_10078699
285 Ga0070711_100000291
286 Ga0070711_100002406
287 Ga0070711_100019403
288 Ga0070711_100108949
289 Ga0070705_100018895
290 Ga0070700_100000047
291 Ga0070681_10017713
292 Ga0068867_100046118
293 Ga0070706_100000305
294 Ga0070699_100000978
295 Ga0070699_100149914
296 Ga0070679_100072340
297 Ga0070684_100099843
298 Ga0068853_100023573
299 Ga0068853_100049732
300 Ga0070693_100023856
301 Ga0070693_100068658
302 Ga0068856_100003033
303 Ga0068856_100013983
304 Ga0070702_100003608
305 Ga0068859_100010222
306 Ga0068859_100019709
307 Ga0068859_100023383
308 Ga0068859_100026874
309 Ga0068859_100042207
310 Ga0068859_100081593
311 Ga0068859_100256754
312 Ga0068864_100004701
313 Ga0068864_100126635
314 Ga0068861_100134453
315 Ga0068863_100052965
316 Ga0068858_100044248
317 Ga0068858_100102785
318 Ga0068860_100088241
319 Ga0068862_100300087
320 Ga0081539_10001529
321 Ga0081539_10023034
322 Ga0070717_10009093
323 Ga0070717_10060878
324 Ga0070717_10067707
325 Ga0070715_10005678
326 Ga0070716_100003303
327 Ga0070712_100002207
328 Ga0070712_100023342
329 Ga0070712_100047846
330 Ga0068871_100084213
331 Ga0075431_100324257
332 Ga0075433_10004469
333 Ga0075433_10016478
334 Ga0075433_10051293
335 Ga0075433_10259446
336 Ga0075434_100003010
337 Ga0075434_100047496
338 Ga0075434_100057181
339 Ga0075434_100189519
340 Ga0075436_100003351
341 Ga0097620_100010221
342 Ga0097620_100019709
343 Ga0097620_100023383
344 Ga0097620_100026873
345 Ga0097620_100042208
346 Ga0097620_100081598
347 Ga0097620_100256778
348 Ga0075435_100158079
349 Ga0105251_10047991
350 Ga0105240_10005878
351 Ga0111539_10025401
352 Ga0111539_10087530
353 Ga0105243_10002285
354 Ga0105241_10040081
355 Ga0105241_10070960
356 Ga0105241_10109493
357 Ga0105241_10234021
358 Ga0105242_10026361
359 Ga0105242_10179117
360 Ga0105248_10034742
361 Ga0105248_10038862
362 Ga0105248_10451749
363 Ga0105237_10000843
364 Ga0105237_10028407
365 Ga0105238_10002828
366 Ga0105238_10013280
367 Ga0105249_10057038
368 Ga0105249_10217847
369 Ga0105249_10301403
370 Ga0157373_10008162
371 Ga0157373_10053310
372 Ga0157373_10161618
373 Ga0157373_10179761
374 Ga0157369_10339888
375 Ga0157369_10382011
376 Ga0157378_10072303
377 Ga0157372_10047400
378 Ga0157372_10059033
379 Ga0157372_10095033
380 Ga0157372_10161943
381 Ga0163163_10000209
382 Ga0163163_10120250
383 Ga0163163_10130639
384 Ga0157380_10023612
385 Ga0157377_10036626
386 Ga0157379_10077363
387 Ga0157379_10341595
388 Ga0157376_10111678
389 Ga0228598_1000209
390 Ga0207653_10000894
391 Ga0207692_10061141
392 Ga0207692_10077920
393 Ga0207647_10030140
394 Ga0207699_10001190
395 Ga0207643_10054776
396 Ga0207684_10000053
397 Ga0207654_10069610
398 Ga0207707_10010168
399 Ga0207695_10009484
400 Ga0207671_10001210
401 Ga0207693_10000065
402 Ga0207693_10000241
403 Ga0207693_10040304
404 Ga0207693_10131218
405 Ga0207663_10000935
406 Ga0207663_10005184
407 Ga0207663_10076238
408 Ga0207662_10101456
409 Ga0207657_10139008
410 Ga0207694_10025335
411 Ga0207650_10000007
412 Ga0207650_10035572
413 Ga0207650_10103377
414 Ga0207659_10064626
415 Ga0207700_10001772
416 Ga0207700_10070177
417 Ga0207700_10129692
418 Ga0207700_10215610
419 Ga0207644_10002902
420 Ga0207690_10105443
421 Ga0207686_10055438
422 Ga0207670_10001523
423 Ga0207691_10014923
424 Ga0207711_10090566
425 Ga0207689_10038574
426 Ga0207689_10083170
427 Ga0207679_10290042
428 Ga0207712_10067809
429 Ga0207640_10047401
430 Ga0207703_10036835
431 Ga0207703_10159264
432 Ga0207703_10211339
433 Ga0207678_10002856
434 Ga0207708_10000113
435 Ga0207708_10033466
436 Ga0207702_10002870
437 Ga0207641_10126464
438 Ga0207641_10293667
439 Ga0207648_10073244
440 Ga0207676_10014396
441 Ga0207676_10125081
442 Ga0207674_10001248
443 Ga0207674_10056973
444 Ga0207674_10197246
445 Ga0207675_100006726
446 Ga0207675_100119484
447 Ga0207675_100129568
448 Ga0207428_10009063
449 Ga0268265_10073172
450 Ga0265338_10004213
451 Ga0265762_1000702
452 Ga0307408_100182997
453 Ga0307406_10000949
454 Ga0307416_100018088
455 Ga0307414_10036796
456 Ga0307414_10056296
457 Ga0307414_10201350
458 Ga0307415_100027870
459 Ga0373939_0020088
460 Ga0373931_0019667
461 Ga0373935_0112184
462 Ga0373947_0138739
463 Ga0373937_0187119
464 Ga0373925_0010038
465 Ga0395900_0101090
466 Ga0395901_0225882
467 Ga0436365_1617806
468 Ga0439458_0015265
469 Ga0466959_0137645
470 Ga0466967_0269452
471 Ga0495580_0033793
472 Ga0495639_0013516
473 Ga0495664_0080038
474 Ga0495586_0058678
475 Ga0495645_0084737
476 Ga0496102_0105025
477 Ga0496103_0064413
478 Ga0496107_0074668
479 Ga0501298_014540
480 Ga0501299_004362
481 Ga0501038_0019127
482 Ga0501198_004759
483 Ga0501199_001363
484 Ga0501209_004302
485 Ga0501217_006130
486 Ga0501223_007645
487 Ga0501227_003485
488 Ga0501247_001301
489 Ga0501225_0008318
490 Ga0501234_001166
491 Ga0501279_006252
492 nmdc:mga06r32_354332_c1
493 nmdc:mga08y16_2741_c1
494 nmdc:mga0n895_17724_c1
495 nmdc:mga0n895_21279_c1
496 nmdc:mga0n895_86932_c1
497 nmdc:mga0n895_99848_c1
498 nmdc:mga0rr50_155782_c1
499 nmdc:mga08x19_119845_c1
500 nmdc:mga08x19_3217_c1
501 nmdc:mga08x19_488_c1
502 nmdc:mga0a205_108836_c1
503 nmdc:mga0a205_122679_c1
504 nmdc:mga0a205_147164_c1
505 nmdc:mga0a205_16387_c1
506 nmdc:mga0a205_167817_c1
507 nmdc:mga0a205_30536_c1
508 nmdc:mga0a205_5488_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01266

DAO

FAD dependent oxidoreductase

9

57

0.92

PF01946

Thi4

Thi4 family

3

106

0.92

PF13454

NAD_binding_9

FAD-NAD(P)-binding

11

57

0.91

PF12831

FAD_oxidored

FAD dependent oxidoreductase

9

88

0.9

PF01134

GIDA

Glucose inhibited division protein A

9

51

0.89

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

12

92

0.87

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

8

318

0.83

PF00890

FAD_binding_2

FAD binding domain

9

131

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mig-assembly1.cif.gz_B pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9904 15 46
3hdq-assembly1.cif.gz_A crystal structure of udp-galactopyranose mutase (oxidized form) in complex with substrate 0.9859 15 52
4mig-assembly1.cif.gz_C pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9858 15 46
1i8t-assembly1.cif.gz_B structure of udp-galactopyranose mutase from e.coli 0.966 15 52
1wam-assembly1.cif.gz_A structure of udp-galactopyranose mutase from klebsiella pneumoniae with fadh- 0.9502 15 52
ID Description Score Start End Superfamily
af_Q2FZ31_2_179_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9361 15 47 3.50.50.60
af_P0A6S7_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9309 13 47 3.40.50.720
af_Q58883_2_383_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.929 17 52 3.50.50.60
af_Q8LLD4_13_381_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8889 13 52 3.50.50.60
af_P9WP27_7_319_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8621 16 52 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A516SES4-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9672 13 431 GO:0016491
AF-A0A7W1FM06-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9663 11 431 GO:0016491
AF-A0A7V3ELZ1-F1-model_v4 FAD-dependent oxidoreductase 0.966 12 428 GO:0016491
AF-A0A7Y2JU59-F1-model_v4 FAD-dependent oxidoreductase 0.9639 11 428 GO:0016491
AF-A0A522PET3-F1-model_v4 FAD-dependent oxidoreductase 0.9638 9 419 GO:0016491

Map