F365195

General Info

Members Datasets Scaffolds Average Seq Length
254 197 183 288

Family's Representative Sequence

Representative Sequence 3300048922|Ga0496119_0014764|Ga0496119_0014764_432_1346
Length 304
Sequence MMVALAPNAPRAQPSKWQQPRIIDVDDVAASAVHCLLLEVETWPKPGLVSRVDRGSHQDMDADTFRASAAAIAPYLHALADAGARGCGMGRLRVIGLEAEAAMFAATSGINTHRGAIFGMGLLCAAAGARAGGLIDPTVSLGTIVSRLWGSDIVDGPVLLHSHGGGARRRFGAGGARMEAARGFPSVYEVGLPALLRGALAAPGDAEAARVEACFALIAAVEDTNLLHRGGLPGLQYAHRAAHRFLAKGGVGRTGWRAHAKSVHKSFVARGLSPGGSADLLAMTLFVEANERRLLMANAMKSVS

Samples

Sample ID Description Type Environment
1 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
2 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
3 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
4 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
5 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
6 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
7 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
8 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
9 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
10 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
11 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
12 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
13 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
14 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
15 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
16 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
17 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
18 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
19 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
20 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
21 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
22 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
23 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
24 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
25 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
26 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
27 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
28 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
29 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
30 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
31 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
32 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
33 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
34 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
35 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
36 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
37 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
38 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
39 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
40 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
41 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
42 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
43 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
44 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
45 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
46 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
47 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
48 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
49 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
50 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
51 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
52 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
53 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
54 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
55 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
56 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
57 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
58 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
59 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
60 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
61 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
62 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
63 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
64 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
65 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
66 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
67 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
68 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
69 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
70 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
71 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
72 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
73 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
74 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
75 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
76 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
77 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
78 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
79 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
80 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
81 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
82 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
83 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
84 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
85 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
86 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
92 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
94 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
95 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
97 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
98 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
114 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
119 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
124 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
128 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
129 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
132 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
151 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
160 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
161 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
162 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
163 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
164 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
165 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
166 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
167 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
168 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
169 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
172 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
173 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
174 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
175 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
176 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
177 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
178 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
179 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
180 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
181 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
182 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
183 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
184 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
185 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
186 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
187 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
188 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
189 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
190 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
191 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
192 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
193 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
194 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
195 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
196 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
197 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 72.05
Metatranscriptomes 0
Isolates 27.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.65
Nodule 20.08
Rhizoplane 7.48
Rhizosphere 31.89
Stem 0
Stem Tuber 0
Unclassified 18.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000678 3300002987 Bacteria 15023
2 JGI25153J46596_10020976 3300003215 Bacteria 2450
3 rootH1_10105078 3300003323 Bacteria 3922
4 JGI25160J50197_1000413 3300003354 Bacteria 27195
5 JGI25160J50197_1001701 3300003354 Bacteria 10676
6 JGI25160J50197_1002247 3300003354 Bacteria 9073
7 JGI25161J50226_1000905 3300003374 Bacteria 10676
8 Ga0055539_1010839 3300003752 Bacteria 1127
9 Ga0055543_1000079 3300004625 Bacteria 84916
10 Ga0055543_1002291 3300004625 Bacteria 6462
11 Ga0065165_1000342 3300005262 Bacteria 76302
12 Ga0065165_1002903 3300005262 Bacteria 13143
13 Ga0068869_100007901 3300005334 Bacteria 6830
14 Ga0070692_10185720 3300005345 Bacteria 1208
15 Ga0070659_100090736 3300005366 Bacteria 2449
16 Ga0070709_10221887 3300005434 Bacteria 1348
17 Ga0070710_10028032 3300005437 Bacteria 3009
18 Ga0070711_100020841 3300005439 Bacteria 4231
19 Ga0070663_100111921 3300005455 Bacteria 2052
20 Ga0070662_100006917 3300005457 Bacteria 7342
21 Ga0070706_100047916 3300005467 Bacteria 3944
22 Ga0070698_100224493 3300005471 Bacteria 1812
23 Ga0068853_100187665 3300005539 Bacteria 1877
24 Ga0068853_100218478 3300005539 Bacteria 1740
25 Ga0070665_100006487 3300005548 Bacteria 11901
26 Ga0070665_100009232 3300005548 Bacteria 9990
27 Ga0070665_100191641 3300005548 Bacteria 2045
28 Ga0068857_100225094 3300005577 Bacteria 1714
29 Ga0068866_10240651 3300005718 Bacteria 1102
30 Ga0068863_100273261 3300005841 Bacteria 1636
31 Ga0068860_100124052 3300005843 Bacteria 2475
32 Ga0081455_10001834 3300005937 Bacteria 25601
33 Ga0081455_10090068 3300005937 Bacteria 2488
34 Ga0081540_1009036 3300005983 Bacteria 6887
35 Ga0075365_10038343 3300006038 Bacteria 3114
36 Ga0075365_10061881 3300006038 Bacteria 2501
37 Ga0070715_10111525 3300006163 Bacteria 1291
38 Ga0070712_100006325 3300006175 Bacteria 7342
39 Ga0070712_100040761 3300006175 Bacteria 3185
40 Ga0075369_10066866 3300006186 Bacteria 1577
41 Ga0068871_100369244 3300006358 Bacteria 1272
42 Ga0099795_10007237 3300007788 Bacteria 3083
43 Ga0105250_10130273 3300009092 Bacteria 1038
44 Ga0105240_10000341 3300009093 Bacteria 87370
45 Ga0105240_10000342 3300009093 Bacteria 87277
46 Ga0105247_10068485 3300009101 Bacteria 2213
47 Ga0105239_10000041 3300010375 Bacteria 200922
48 Ga0105239_10017992 3300010375 Bacteria 7815
49 Ga0105239_10045380 3300010375 Bacteria 4816
50 Ga0163162_10028259 3300013306 Bacteria 5548
51 Ga0163162_10330971 3300013306 Bacteria 1656
52 Ga0163163_10317688 3300014325 Bacteria 1611
53 Ga0157380_10366231 3300014326 Bacteria 1354
54 Ga0157376_10090568 3300014969 Bacteria 2647
55 Ga0209563_102568 3300025230 Bacteria 4057
56 Ga0209130_1000219 3300025284 Bacteria 74906
57 Ga0209025_1038354 3300025294 Bacteria 2109
58 Ga0209564_1008457 3300025295 Bacteria 5074
59 Ga0209758_1000209 3300025297 Bacteria 128038
60 Ga0209758_1002841 3300025297 Bacteria 16832
61 Ga0209758_1004616 3300025297 Bacteria 11306
62 Ga0209758_1039977 3300025297 Bacteria 1775
63 Ga0207426_1000075 3300025302 Bacteria 321337
64 Ga0207426_1000237 3300025302 Bacteria 124707
65 Ga0207426_1013001 3300025302 Bacteria 3104
66 Ga0207426_1030779 3300025302 Bacteria 1757
67 Ga0209257_1020705 3300025304 Bacteria 2417
68 Ga0207699_10001088 3300025906 Bacteria 12830
69 Ga0207695_10000311 3300025913 Bacteria 117484
70 Ga0207695_10005152 3300025913 Bacteria 17506
71 Ga0207693_10001127 3300025915 Bacteria 23971
72 Ga0207700_10137893 3300025928 Bacteria 2001
73 Ga0207690_10178298 3300025932 Bacteria 1598
74 Ga0207706_10013352 3300025933 Bacteria 7472
75 Ga0207706_10081877 3300025933 Bacteria 2837
76 Ga0207689_10002319 3300025942 Bacteria 17836
77 Ga0207678_10007805 3300026067 Bacteria 9447
78 Ga0207678_10040954 3300026067 Bacteria 4016
79 Ga0207708_10047003 3300026075 Bacteria 3287
80 Ga0207675_100000292 3300026118 Bacteria 48260
81 Ga0209179_1010356 3300027512 Unclassified 1624
82 Ga0268266_10005075 3300028379 Bacteria 12419
83 Ga0268266_10005250 3300028379 Bacteria 12165
84 Ga0268266_10069637 3300028379 Bacteria 3048
85 Ga0268265_10061732 3300028380 Bacteria 2877
86 Ga0268265_10287716 3300028380 Bacteria 1474
87 Ga0307405_10008191 3300031731 Bacteria 5285
88 Ga0307410_10172310 3300031852 Bacteria 1632
89 Ga0326468_10001743 3300031889 Bacteria 1862
90 Ga0307416_100187023 3300032002 Bacteria 1948
91 Ga0307415_100061922 3300032126 Bacteria 2593
92 Ga0307415_100206770 3300032126 Bacteria 1562
93 Ga0395905_0208365 3300037471 Bacteria 1832
94 Ga0451793_0280828 3300041452 Bacteria 2838
95 Ga0451807_0987190 3300041486 Bacteria 2786
96 Ga0495638_0000019 3300046460 Bacteria 384671
97 Ga0495605_0153523 3300046474 Bacteria 1026
98 Ga0495585_0090360 3300046492 Bacteria 1650
99 Ga0495606_0249244 3300046507 Bacteria 986
100 Ga0495620_0046975 3300046515 Bacteria 1861
101 Ga0495643_0121569 3300046522 Bacteria 1319
102 Ga0495663_0041157 3300046525 Bacteria 1405
103 Ga0495611_0060002 3300046648 Bacteria 1728
104 Ga0495611_0087928 3300046648 Bacteria 1434
105 Ga0495669_0047221 3300046684 Bacteria 1923
106 Ga0495636_0035771 3300047318 Bacteria 2046
107 Ga0495672_0035538 3300047320 Bacteria 3069
108 Ga0495673_0059158 3300047469 Bacteria 1648
109 Ga0495681_0149704 3300047470 Bacteria 980
110 Ga0495686_0121113 3300047472 Bacteria 1559
111 Ga0495686_0230225 3300047472 Bacteria 1050
112 Ga0496100_0011936 3300048903 Bacteria 4964
113 Ga0496102_0030791 3300048905 Bacteria 4805
114 Ga0496103_0116234 3300048906 Bacteria 1702
115 Ga0496104_0012050 3300048907 Bacteria 7761
116 Ga0496105_0016203 3300048908 Bacteria 5946
117 Ga0496105_0017660 3300048908 Bacteria 5723
118 Ga0496107_0019342 3300048910 Bacteria 4805
119 Ga0496107_0266150 3300048910 Bacteria 1276
120 Ga0496107_0442974 3300048910 Bacteria 965
121 Ga0496108_0057842 3300048911 Bacteria 3258
122 Ga0496110_0281937 3300048913 Bacteria 1513
123 Ga0496111_0126200 3300048914 Bacteria 1892
124 Ga0496112_0032045 3300048915 Bacteria 5102
125 Ga0496113_0088892 3300048916 Bacteria 2377
126 Ga0496114_0022782 3300048917 Bacteria 5105
127 Ga0496115_0176706 3300048918 Bacteria 1765
128 Ga0496116_0142276 3300048919 Bacteria 1347
129 Ga0496116_0170473 3300048919 Bacteria 1180
130 Ga0496117_0004582 3300048920 Bacteria 15118
131 Ga0496117_0020523 3300048920 Bacteria 5381
132 Ga0496118_0000994 3300048921 Bacteria 44167
133 Ga0496118_0010661 3300048921 Bacteria 9066
134 Ga0496118_0119442 3300048921 Bacteria 1724
135 Ga0496119_0000191 3300048922 Bacteria 86355
136 Ga0496119_0002194 3300048922 Bacteria 21820
137 Ga0496119_0014764 3300048922 Bacteria 6079
138 Ga0496119_0100282 3300048922 Bacteria 1627
139 Ga0496119_0129626 3300048922 Bacteria 1376
140 Ga0496120_0000321 3300048923 Bacteria 79469
141 Ga0496120_0000350 3300048923 Bacteria 75997
142 Ga0496120_0209873 3300048923 Bacteria 937
143 Ga0496121_0009992 3300048924 Bacteria 10791
144 Ga0496121_0055662 3300048924 Bacteria 3293
145 Ga0496122_0102977 3300048925 Bacteria 1901
146 Ga0496124_0007731 3300048927 Bacteria 11364
147 Ga0496124_0078781 3300048927 Bacteria 2715
148 Ga0496124_0325258 3300048927 Bacteria 1099
149 Ga0496125_0057753 3300048928 Bacteria 3140
150 Ga0496126_0001231 3300048929 Bacteria 41618
151 Ga0496126_0010532 3300048929 Bacteria 9682
152 Ga0496126_0031271 3300048929 Bacteria 5032
153 Ga0496126_0050161 3300048929 Bacteria 3805
154 Ga0496126_0106573 3300048929 Bacteria 2446
155 Ga0496126_0256218 3300048929 Bacteria 1456
156 nmdc:mga00v17_25120_c1 3300050491 Bacteria 3460
157 nmdc:mga0yw44_2128_c1 3300050492 Bacteria 8301
158 nmdc:mga0yw44_308360_c1 3300050492 Bacteria 1061
159 nmdc:mga0yw44_53070_c1 3300050492 Bacteria 2460
160 nmdc:mga0yw44_83327_c1 3300050492 Bacteria 2008
161 nmdc:mga07m45_4015_c1 3300050496 Bacteria 7162
162 Ga0500635_0074807 3300053080 Bacteria 1207
163 Ga0500578_0183862 3300053086 Bacteria 1287
164 Ga0500643_000097 3300053087 Bacteria 92120
165 Ga0500643_005357 3300053087 Bacteria 5544
166 Ga0500583_0088119 3300053092 Bacteria 1508
167 Ga0500566_0000029 3300053094 Bacteria 75384
168 Ga0500566_0117208 3300053094 Bacteria 1440
169 Ga0500569_003041 3300053109 Bacteria 3377
170 Ga0500572_002243 3300053111 Bacteria 4717
171 Ga0500595_001774 3300053119 Bacteria 11225
172 Ga0500595_018539 3300053119 Bacteria 2543
173 Ga0500608_146094 3300053122 Bacteria 1042
174 Ga0500652_041325 3300053131 Bacteria 1857
175 Ga0500568_0000082 3300053139 Bacteria 92308
176 Ga0500616_0115110 3300053153 Bacteria 1293
177 Ga0500620_006890 3300053155 Bacteria 2765
178 Ga0500636_0000420 3300053177 Bacteria 23339
179 Ga0500636_0002621 3300053177 Bacteria 9991
180 Ga0500637_0049789 3300053178 Bacteria 2385
181 Ga0500599_001049 3300053736 Bacteria 3117
182 Ga0500601_000525 3300053737 Bacteria 5772
183 Ga0500661_020509 3300055283 Bacteria 1175

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003323 rootH1_10105078 rootH1_101050783 229
2 3300005937 Ga0081455_10001834 Ga0081455_100018349 233
3 iso_pu_bacteria 2824653114 2824656091 235
4 iso_pu_bacteria 2888419890 2888421633 235
5 3300046474 Ga0495605_0153523 Ga0495605_0153523_131_907 239
6 3300046522 Ga0495643_0121569 Ga0495643_0121569_524_1300 239
7 3300046525 Ga0495663_0041157 Ga0495663_0041157_93_869 239
8 3300046648 Ga0495611_0087928 Ga0495611_0087928_596_1372 239
9 3300047318 Ga0495636_0035771 Ga0495636_0035771_1190_1966 239
10 3300047470 Ga0495681_0149704 Ga0495681_0149704_15_791 239
11 3300048910 Ga0496107_0266150 Ga0496107_0266150_227_1003 239
12 3300048929 Ga0496126_0106573 Ga0496126_0106573_60_836 239
13 3300053119 Ga0500595_001774 Ga0500595_001774_7400_8176 239
14 3300053178 Ga0500637_0049789 Ga0500637_0049789_668_1444 239
15 3300047320 Ga0495672_0035538 Ga0495672_0035538_2031_2813 240
16 iso_pu_bacteria 2874628541 2874633809 246
17 3300005434 Ga0070709_10221887 Ga0070709_102218872 249
18 3300005467 Ga0070706_100047916 Ga0070706_1000479166 249
19 3300005841 Ga0068863_100273261 Ga0068863_1002732612 249
20 3300006175 Ga0070712_100040761 Ga0070712_1000407613 249
21 3300014325 Ga0163163_10317688 Ga0163163_103176882 251
22 3300041452 Ga0451793_0280828 Ga0451793_0280828_468_1376 254
23 3300048922 Ga0496119_0129626 Ga0496119_0129626_228_1079 257
24 3300048923 Ga0496120_0209873 Ga0496120_0209873_32_883 257
25 3300053177 Ga0500636_0002621 Ga0500636_0002621_2588_3445 260
26 3300048919 Ga0496116_0170473 Ga0496116_0170473_105_986 261
27 3300048924 Ga0496121_0009992 Ga0496121_0009992_8745_9626 261
28 3300053139 Ga0500568_0000082 Ga0500568_0000082_67126_68001 261
29 iso_pu_bacteria 2513237095 2513651974 262
30 iso_pu_bacteria 2816332527 2818239178 262
31 iso_pu_bacteria 2849076700 2849078868 262
32 iso_pu_bacteria 2888378607 2888379186 262
33 3300003354 JGI25160J50197_1002247 JGI25160J50197_10022474 263
34 3300005937 Ga0081455_10090068 Ga0081455_100900682 263
35 3300006038 Ga0075365_10061881 Ga0075365_100618812 263
36 3300025302 Ga0207426_1013001 Ga0207426_10130012 263
37 3300048915 Ga0496112_0032045 Ga0496112_0032045_1105_1983 263
38 3300048922 Ga0496119_0100282 Ga0496119_0100282_514_1392 263
39 3300050492 nmdc:mga0yw44_53070_c1 nmdc:mga0yw44_53070_c1_777_1655 263
40 iso_pu_bacteria 2513237102 2513702770 263
41 iso_pu_bacteria 2517093001 2517101009 263
42 iso_pu_bacteria 2824600985 2824604844 263
43 iso_pu_bacteria 2824609381 2824611404 263
44 iso_pu_bacteria 2824617872 2824620242 263
45 iso_pu_bacteria 2824626560 2824629507 263
46 iso_pu_bacteria 2824635225 2824635827 263
47 iso_pu_bacteria 2824644064 2824646129 263
48 iso_pu_bacteria 2824714736 2824716673 263
49 iso_pu_bacteria 2824723954 2824726630 263
50 iso_pu_bacteria 2824753945 2824757891 263
51 iso_pu_bacteria 2824763712 2824766977 263
52 iso_pu_bacteria 2857509624 2857512495 263
53 iso_pu_bacteria 2874612657 2874617380 263
54 iso_pu_bacteria 2885366525 2885369735 263
55 iso_pu_bacteria 2888388044 2888389482 263
56 iso_pu_bacteria 2904711408 2904712505 263
57 iso_pu_bacteria 2929615660 2929620801 263
58 iso_pu_bacteria 2929624759 2929626695 263
59 iso_pu_bacteria 2932784394 2932784440 263
60 iso_pu_bacteria 2932828146 2932828210 263
61 iso_pu_bacteria 2933577622 2933582715 263
62 iso_pu_bacteria 2935616580 2935617184 263
63 iso_pu_bacteria 2935638405 2935639335 263
64 iso_pu_bacteria 2935665750 2935665814 263
65 iso_pu_bacteria 2935675223 2935675460 263
66 iso_pu_bacteria 2935694250 2935698778 263
67 iso_pu_bacteria 2935703347 2935704342 263
68 iso_pu_bacteria 2935769743 2935776875 263
69 iso_pu_bacteria 2935785616 2935792867 263
70 iso_pu_bacteria 2935793552 2935800991 263
71 iso_pu_bacteria 2935801545 2935802424 263
72 iso_pu_bacteria 2935827899 2935828830 263
73 iso_pu_bacteria 2935837841 2935840204 263
74 iso_pu_bacteria 2935855204 2935855809 263
75 iso_pu_bacteria 2935864058 2935866248 263
76 iso_pu_bacteria 2935873716 2935877426 263
77 iso_pu_bacteria 2935992306 2935992371 263
78 iso_pu_bacteria 2936002035 2936002243 263
79 iso_pu_bacteria 2941538514 2941540455 263
80 iso_pu_bacteria 8016511872 8016521326 263
81 iso_pu_bacteria 8016522445 8016529831 263
82 iso_pu_bacteria 8016530956 8016535065 263
83 iso_pu_bacteria 8016539877 8016548271 263
84 iso_pu_bacteria 8016548790 8016553854 263
85 iso_pu_bacteria 8016557553 8016562229 263
86 iso_pu_bacteria 8016566248 8016573408 263
87 iso_pu_bacteria 8016595262 8016600045 263
88 iso_pu_bacteria 8016613128 8016614213 263
89 iso_pu_bacteria 8016622563 8016626771 263
90 iso_pu_bacteria 8017057580 8017064295 263
91 iso_pu_bacteria 8019530166 8019534820 263
92 iso_pu_bacteria 8019538911 8019544655 263
93 iso_pu_bacteria 8019547302 8019553882 263
94 iso_pu_bacteria 8019576017 8019583639 263
95 iso_pu_bacteria 8019586578 8019591453 263
96 iso_pu_bacteria 8019597564 8019599888 263
97 iso_pu_bacteria 8019608314 8019618657 263
98 iso_pu_bacteria 8019648815 8019659075 263
99 iso_pu_bacteria 8055742211 8055745662 263
100 3300003215 JGI25153J46596_10020976 JGI25153J46596_100209762 264
101 3300003354 JGI25160J50197_1000413 JGI25160J50197_100041312 264
102 3300003752 Ga0055539_1010839 Ga0055539_10108392 264
103 3300004625 Ga0055543_1002291 Ga0055543_10022913 264
104 3300005262 Ga0065165_1000342 Ga0065165_100034253 264
105 3300005334 Ga0068869_100007901 Ga0068869_1000079012 264
106 3300005345 Ga0070692_10185720 Ga0070692_101857201 264
107 3300005366 Ga0070659_100090736 Ga0070659_1000907363 264
108 3300005437 Ga0070710_10028032 Ga0070710_100280322 264
109 3300005439 Ga0070711_100020841 Ga0070711_1000208412 264
110 3300005455 Ga0070663_100111921 Ga0070663_1001119212 264
111 3300005457 Ga0070662_100006917 Ga0070662_1000069179 264
112 3300005471 Ga0070698_100224493 Ga0070698_1002244932 264
113 3300005539 Ga0068853_100187665 Ga0068853_1001876652 264
114 3300005539 Ga0068853_100218478 Ga0068853_1002184782 264
115 3300005548 Ga0070665_100006487 Ga0070665_1000064873 264
116 3300005548 Ga0070665_100191641 Ga0070665_1001916411 264
117 3300005718 Ga0068866_10240651 Ga0068866_102406511 264
118 3300005843 Ga0068860_100124052 Ga0068860_1001240522 264
119 3300005983 Ga0081540_1009036 Ga0081540_10090364 264
120 3300006038 Ga0075365_10038343 Ga0075365_100383432 264
121 3300006163 Ga0070715_10111525 Ga0070715_101115252 264
122 3300006175 Ga0070712_100006325 Ga0070712_1000063254 264
123 3300006186 Ga0075369_10066866 Ga0075369_100668662 264
124 3300009092 Ga0105250_10130273 Ga0105250_101302732 264
125 3300009101 Ga0105247_10068485 Ga0105247_100684853 264
126 3300010375 Ga0105239_10017992 Ga0105239_100179927 264
127 3300010375 Ga0105239_10045380 Ga0105239_100453804 264
128 3300013306 Ga0163162_10028259 Ga0163162_100282595 264
129 3300014326 Ga0157380_10366231 Ga0157380_103662312 264
130 3300014969 Ga0157376_10090568 Ga0157376_100905683 264
131 3300025230 Ga0209563_102568 Ga0209563_1025684 264
132 3300025295 Ga0209564_1008457 Ga0209564_10084573 264
133 3300025297 Ga0209758_1000209 Ga0209758_100020956 264
134 3300025297 Ga0209758_1002841 Ga0209758_100284114 264
135 3300025297 Ga0209758_1004616 Ga0209758_10046167 264
136 3300025297 Ga0209758_1039977 Ga0209758_10399772 264
137 3300025302 Ga0207426_1000237 Ga0207426_100023745 264
138 3300025302 Ga0207426_1030779 Ga0207426_10307792 264
139 3300025304 Ga0209257_1020705 Ga0209257_10207052 264
140 3300025906 Ga0207699_10001088 Ga0207699_100010889 264
141 3300025915 Ga0207693_10001127 Ga0207693_1000112721 264
142 3300025928 Ga0207700_10137893 Ga0207700_101378931 264
143 3300025932 Ga0207690_10178298 Ga0207690_101782982 264
144 3300025933 Ga0207706_10013352 Ga0207706_100133526 264
145 3300025933 Ga0207706_10081877 Ga0207706_100818774 264
146 3300025942 Ga0207689_10002319 Ga0207689_100023197 264
147 3300026067 Ga0207678_10007805 Ga0207678_100078058 264
148 3300026067 Ga0207678_10040954 Ga0207678_100409544 264
149 3300026075 Ga0207708_10047003 Ga0207708_100470034 264
150 3300026118 Ga0207675_100000292 Ga0207675_10000029221 264
151 3300028379 Ga0268266_10005075 Ga0268266_100050755 264
152 3300028379 Ga0268266_10069637 Ga0268266_100696373 264
153 3300028380 Ga0268265_10061732 Ga0268265_100617323 264
154 3300028380 Ga0268265_10287716 Ga0268265_102877162 264
155 3300031852 Ga0307410_10172310 Ga0307410_101723101 264
156 3300031889 Ga0326468_10001743 Ga0326468_100017432 264
157 3300032002 Ga0307416_100187023 Ga0307416_1001870232 264
158 3300032126 Ga0307415_100061922 Ga0307415_1000619223 264
159 3300032126 Ga0307415_100206770 Ga0307415_1002067702 264
160 3300041486 Ga0451807_0987190 Ga0451807_0987190_1012_1893 264
161 3300046492 Ga0495585_0090360 Ga0495585_0090360_190_1071 264
162 3300046507 Ga0495606_0249244 Ga0495606_0249244_72_953 264
163 3300046515 Ga0495620_0046975 Ga0495620_0046975_515_1396 264
164 3300046648 Ga0495611_0060002 Ga0495611_0060002_836_1717 264
165 3300046684 Ga0495669_0047221 Ga0495669_0047221_206_1087 264
166 3300047469 Ga0495673_0059158 Ga0495673_0059158_645_1526 264
167 3300047472 Ga0495686_0121113 Ga0495686_0121113_377_1258 264
168 3300048905 Ga0496102_0030791 Ga0496102_0030791_1505_2386 264
169 3300048906 Ga0496103_0116234 Ga0496103_0116234_123_1004 264
170 3300048908 Ga0496105_0017660 Ga0496105_0017660_1027_1908 264
171 3300048910 Ga0496107_0019342 Ga0496107_0019342_438_1319 264
172 3300048911 Ga0496108_0057842 Ga0496108_0057842_1027_1908 264
173 3300048913 Ga0496110_0281937 Ga0496110_0281937_346_1227 264
174 3300048914 Ga0496111_0126200 Ga0496111_0126200_172_1053 264
175 3300048916 Ga0496113_0088892 Ga0496113_0088892_123_1004 264
176 3300048917 Ga0496114_0022782 Ga0496114_0022782_1636_2517 264
177 3300048918 Ga0496115_0176706 Ga0496115_0176706_316_1197 264
178 3300048927 Ga0496124_0078781 Ga0496124_0078781_593_1474 264
179 3300048927 Ga0496124_0325258 Ga0496124_0325258_73_954 264
180 3300048929 Ga0496126_0031271 Ga0496126_0031271_2367_3248 264
181 3300050491 nmdc:mga00v17_25120_c1 nmdc:mga00v17_25120_c1_1618_2499 264
182 3300050492 nmdc:mga0yw44_2128_c1 nmdc:mga0yw44_2128_c1_3494_4375 264
183 3300050492 nmdc:mga0yw44_308360_c1 nmdc:mga0yw44_308360_c1_79_960 264
184 3300050492 nmdc:mga0yw44_83327_c1 nmdc:mga0yw44_83327_c1_507_1388 264
185 3300050496 nmdc:mga07m45_4015_c1 nmdc:mga07m45_4015_c1_579_1460 264
186 3300053080 Ga0500635_0074807 Ga0500635_0074807_297_1178 264
187 3300053086 Ga0500578_0183862 Ga0500578_0183862_116_997 264
188 3300053087 Ga0500643_000097 Ga0500643_000097_38295_39176 264
189 3300053092 Ga0500583_0088119 Ga0500583_0088119_19_900 264
190 3300053094 Ga0500566_0000029 Ga0500566_0000029_64115_64996 264
191 3300053094 Ga0500566_0117208 Ga0500566_0117208_274_1155 264
192 3300053109 Ga0500569_003041 Ga0500569_003041_1836_2717 264
193 3300053111 Ga0500572_002243 Ga0500572_002243_3689_4570 264
194 3300053119 Ga0500595_018539 Ga0500595_018539_1513_2394 264
195 3300053122 Ga0500608_146094 Ga0500608_146094_46_927 264
196 3300053131 Ga0500652_041325 Ga0500652_041325_121_1002 264
197 3300053153 Ga0500616_0115110 Ga0500616_0115110_169_1050 264
198 3300053155 Ga0500620_006890 Ga0500620_006890_316_1197 264
199 3300053177 Ga0500636_0000420 Ga0500636_0000420_9886_10767 264
200 3300053736 Ga0500599_001049 Ga0500599_001049_1295_2176 264
201 3300053737 Ga0500601_000525 Ga0500601_000525_2906_3787 264
202 3300055283 Ga0500661_020509 Ga0500661_020509_36_917 264
203 iso_pu_bacteria 2513237098 2513672159 264
204 iso_pu_bacteria 2524023210 2524464655 264
205 iso_pu_bacteria 2765235802 2765469229 264
206 3300009093 Ga0105240_10000341 Ga0105240_1000034151 265
207 3300025913 Ga0207695_10005152 Ga0207695_100051529 265
208 3300037471 Ga0395905_0208365 Ga0395905_0208365_387_1274 265
209 iso_pu_bacteria 2885383462 2885386246 265
210 3300006358 Ga0068871_100369244 Ga0068871_1003692442 266
211 3300007788 Ga0099795_10007237 Ga0099795_100072372 266
212 3300009093 Ga0105240_10000342 Ga0105240_1000034233 266
213 3300010375 Ga0105239_10000041 Ga0105239_1000004133 266
214 3300013306 Ga0163162_10330971 Ga0163162_103309712 266
215 3300025913 Ga0207695_10000311 Ga0207695_1000031194 266
216 3300027512 Ga0209179_1010356 Ga0209179_10103562 266
217 3300031731 Ga0307405_10008191 Ga0307405_100081917 266
218 3300046460 Ga0495638_0000019 Ga0495638_0000019_219025_219906 266
219 3300047472 Ga0495686_0230225 Ga0495686_0230225_109_999 266
220 3300048903 Ga0496100_0011936 Ga0496100_0011936_2221_3105 266
221 3300048907 Ga0496104_0012050 Ga0496104_0012050_1509_2393 266
222 3300048908 Ga0496105_0016203 Ga0496105_0016203_3108_3992 266
223 3300048910 Ga0496107_0442974 Ga0496107_0442974_38_922 266
224 3300048919 Ga0496116_0142276 Ga0496116_0142276_347_1231 266
225 3300048920 Ga0496117_0004582 Ga0496117_0004582_41_925 266
226 3300048920 Ga0496117_0020523 Ga0496117_0020523_4457_5341 266
227 3300048921 Ga0496118_0000994 Ga0496118_0000994_7616_8500 266
228 3300048921 Ga0496118_0010661 Ga0496118_0010661_6118_7002 266
229 3300048922 Ga0496119_0000191 Ga0496119_0000191_83527_84411 266
230 3300048922 Ga0496119_0014764 Ga0496119_0014764_432_1346 266
231 3300048923 Ga0496120_0000321 Ga0496120_0000321_59771_60655 266
232 3300048925 Ga0496122_0102977 Ga0496122_0102977_539_1429 266
233 3300048927 Ga0496124_0007731 Ga0496124_0007731_4858_5748 266
234 3300048929 Ga0496126_0001231 Ga0496126_0001231_38803_39687 266
235 3300048929 Ga0496126_0010532 Ga0496126_0010532_8096_8986 266
236 3300048929 Ga0496126_0256218 Ga0496126_0256218_361_1251 266
237 3300053087 Ga0500643_005357 Ga0500643_005357_2230_3117 266
238 3300005577 Ga0068857_100225094 Ga0068857_1002250942 267
239 3300048922 Ga0496119_0002194 Ga0496119_0002194_5839_6708 267
240 3300048923 Ga0496120_0000350 Ga0496120_0000350_26350_27219 267
241 3300048924 Ga0496121_0055662 Ga0496121_0055662_1327_2196 267
242 3300048929 Ga0496126_0050161 Ga0496126_0050161_852_1721 267
243 3300002987 JGI25159J45721_1000678 JGI25159J45721_100067816 268
244 3300003354 JGI25160J50197_1001701 JGI25160J50197_10017014 268
245 3300003374 JGI25161J50226_1000905 JGI25161J50226_10009054 268
246 3300004625 Ga0055543_1000079 Ga0055543_10000794 268
247 3300005262 Ga0065165_1002903 Ga0065165_100290311 268
248 3300005548 Ga0070665_100009232 Ga0070665_1000092323 268
249 3300025284 Ga0209130_1000219 Ga0209130_10002192 268
250 3300025294 Ga0209025_1038354 Ga0209025_10383543 268
251 3300025302 Ga0207426_1000075 Ga0207426_1000075212 268
252 3300028379 Ga0268266_10005250 Ga0268266_1000525013 268
253 3300048921 Ga0496118_0119442 Ga0496118_0119442_539_1390 268
254 3300048928 Ga0496125_0057753 Ga0496125_0057753_1983_2834 268

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01874

CitG

ATP:dephospho-CoA triphosphoribosyl transferase

29

288

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h9p-assembly2.cif.gz_C-2 crystal structure of putative triphosphoribosyl-dephospho-coa synthase from archaeoglobus fulgidus 0.5827 60 265
3h9p-assembly2.cif.gz_C-2 crystal structure of putative triphosphoribosyl-dephospho-coa synthase from archaeoglobus fulgidus 0.5508 60 265
7udo-assembly1.cif.gz_A crystal structure of designed helical repeat protein rpb_lrp2_r4 (proteolysis fragment?), forming pseudopolymeric filaments 0.2825 59 265
4mc0-assembly1.cif.gz_A hedycaryol apo 0.2803 53 266
7udo-assembly1.cif.gz_A crystal structure of designed helical repeat protein rpb_lrp2_r4 (proteolysis fragment?), forming pseudopolymeric filaments 0.2771 59 265
ID Description Score Start End Superfamily
af_P77231_46_292_1.10.4200.10 Mainly Alpha;Orthogonal Bundle;Triphosphoribosyl-dephospho-CoA protein;Triphosphoribosyl-dephospho-CoA protein 0.8952 48 263 1.10.4200.10
af_P77231_46_292_1.10.4200.10 Mainly Alpha;Orthogonal Bundle;Triphosphoribosyl-dephospho-CoA protein;Triphosphoribosyl-dephospho-CoA protein 0.785 48 263 1.10.4200.10
af_Q57680_40_300_1.10.4200.10 Mainly Alpha;Orthogonal Bundle;Triphosphoribosyl-dephospho-CoA protein;Triphosphoribosyl-dephospho-CoA protein 0.5921 40 266 1.10.4200.10
3h9pC00 Mainly Alpha;Orthogonal Bundle;Triphosphoribosyl-dephospho-CoA protein;Triphosphoribosyl-dephospho-CoA protein 0.5907 60 265 1.10.4200.10
3h9pC00 Mainly Alpha;Orthogonal Bundle;Triphosphoribosyl-dephospho-CoA protein;Triphosphoribosyl-dephospho-CoA protein 0.5707 60 265 1.10.4200.10
ID Description Score Start End GO Terms
AF-F0GEA0-F1-model_v4 triphosphoribosyl-dephospho-CoA synthase (EC 2.4.2.52) 1.001 17 122 GO:0005524
GO:0046917
GO:0051191
AF-A0A5C8RUP5-F1-model_v4 triphosphoribosyl-dephospho-CoA synthase (EC 2.4.2.52) 0.9851 165 265 GO:0005524
GO:0046917
GO:0051191
AF-W7VWF1-F1-model_v4 triphosphoribosyl-dephospho-CoA synthase (EC 2.4.2.52) 0.9695 182 266 GO:0005524
GO:0016757
GO:0046917
GO:0051191
AF-A0A7W5N1A6-F1-model_v4 deleted 0.9645 17 262
AF-A0A645DWM0-F1-model_v4 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.4.2.52) 0.9616 179 268 GO:0005524
GO:0016757
GO:0046917
GO:0051191

Feature Viewer

pLDDT pTM Quality
89.17 0.87 High
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Predicted Structure (AlphaFold2)

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