F365119

General Info

Members Datasets Scaffolds Average Seq Length
254 141 508 401

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0039164|Ga0466958_0039164_90_1382
Length 430
Sequence MAVNRRKLGALLVALLATAAIAGTAAASHTGTPGVTKNQITIGGTFPFTGPANLYKTIPAAELAYYAYVNAHGGVFHRKIKDLTLDDQYDPSQTPGKTKQLVEQDHVFAIVGSLGTAPILSTWNYLNKRKIPQVLVATGDAYWGQCVHKALSVCGGKAKPWTLGWQPDYPGEAKVYAKYILKNKPHAKIGVLYQNDAYGKNYLAGLKAGLGSHKNQIVDAESYNVGDPAQVIGTHVAVLRGHGADTFVIFATPVPTIQSLVARTAIGWNPLTLVNNVSANRLFELAAANNQPGADLNGIISTAYLESSTTQANLKGMKLAKKIIDATGSQGLQQGLAEGDGNIVYGLAVGWTFVDALKHAGKHLTRAGLMRALRNLNESGKNANPFVYPGMSVKTSKSRGFPMEQLKLERWSGGKTGDWHTFGKLYTGVR

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
14 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
15 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
16 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
17 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
18 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
19 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
20 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
21 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
36 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
41 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
42 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
43 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
44 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
45 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
46 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
47 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
48 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
49 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
50 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
51 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
52 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
55 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
56 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
57 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
58 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
59 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
60 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
61 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
62 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
63 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
64 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
65 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
69 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
70 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
85 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
89 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
90 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
91 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
92 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
93 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
99 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
100 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
101 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
102 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
103 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
137 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
141 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.85
Metatranscriptomes 3.15
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.39
Nodule 0
Rhizoplane 11.02
Rhizosphere 86.22
Stem 0
Stem Tuber 0
Unclassified 9.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0039164 3300045836 Bacteria 2846
2 Ga0070658_10044999 3300005327 Bacteria 3568
3 Ga0070680_100063996 3300005336 Bacteria 3014
4 Ga0070691_10076395 3300005341 Bacteria 1633
5 Ga0070713_100059792 3300005436 Bacteria 3184
6 Ga0070713_100134764 3300005436 Bacteria 2181
7 Ga0070713_100200568 3300005436 Bacteria 1802
8 Ga0070681_10055628 3300005458 Bacteria 3939
9 Ga0070684_100045152 3300005535 Bacteria 3815
10 Ga0070684_100095202 3300005535 Bacteria 2653
11 Ga0070695_100005393 3300005545 Bacteria 7527
12 Ga0068855_100008137 3300005563 Bacteria 12674
13 Ga0068852_100078140 3300005616 Bacteria 2927
14 Ga0070717_10006676 3300006028 Bacteria 8509
15 Ga0070717_10061441 3300006028 Bacteria 3113
16 Ga0070712_100018353 3300006175 Bacteria 4543
17 Ga0105240_10031090 3300009093 Bacteria 6927
18 Ga0105240_10040113 3300009093 Bacteria 5992
19 Ga0105240_10070906 3300009093 Bacteria 4310
20 Ga0105237_10031467 3300009545 Bacteria 5380
21 Ga0157370_10018649 3300013104 Bacteria 6975
22 Ga0157369_10015107 3300013105 Bacteria 8713
23 Ga0157369_10183482 3300013105 Bacteria 2201
24 Ga0163163_10287831 3300014325 Bacteria 1695
25 Ga0197907_10130136 3300020069 Unclassified 1512
26 Ga0197907_10894318 3300020069 Bacteria 3104
27 Ga0206349_1469105 3300020075 Unclassified 1540
28 Ga0206352_10135586 3300020078 Unclassified 1542
29 Ga0206354_10229897 3300020081 Bacteria 1481
30 Ga0206354_10756903 3300020081 Bacteria 1812
31 Ga0206353_10216091 3300020082 Bacteria 3310
32 Ga0224712_10012407 3300022467 Unclassified 2680
33 Ga0207705_10009970 3300025909 Bacteria 6918
34 Ga0207707_10120484 3300025912 Unclassified 2294
35 Ga0207695_10032613 3300025913 Bacteria 5697
36 Ga0207695_10046679 3300025913 Bacteria 4590
37 Ga0207671_10202477 3300025914 Unclassified 1551
38 Ga0207693_10017613 3300025915 Bacteria 5697
39 Ga0207693_10176305 3300025915 Bacteria 1682
40 Ga0207660_10049405 3300025917 Bacteria 2982
41 Ga0207657_10069800 3300025919 Bacteria 2980
42 Ga0207700_10021944 3300025928 Bacteria 4372
43 Ga0207664_10025996 3300025929 Bacteria 4418
44 Ga0207667_10047825 3300025949 Bacteria 4526
45 Ga0265338_10013887 3300028800 Bacteria 9040
46 Ga0265320_10079820 3300031240 Bacteria 1529
47 Ga0265325_10058352 3300031241 Bacteria 1966
48 Ga0265327_10025488 3300031251 Bacteria 3446
49 Ga0265313_10004556 3300031595 Bacteria 10563
50 Ga0265314_10003428 3300031711 Bacteria 15321
51 Ga0373943_0000441 3300035170 Bacteria 17560
52 Ga0373946_0002480 3300035171 Bacteria 6515
53 Ga0373955_0134489 3300035172 Unclassified 1445
54 Ga0373935_0040923 3300035692 Bacteria 2910
55 Ga0373933_0012436 3300035724 Bacteria 4699
56 Ga0373933_0051119 3300035724 Unclassified 2469
57 Ga0373947_0004964 3300035725 Bacteria 7784
58 Ga0373937_0000190 3300036401 Bacteria 60066
59 Ga0373937_0023422 3300036401 Bacteria 5559
60 Ga0373937_0178121 3300036401 Bacteria 1996
61 Ga0373925_0001857 3300037068 Bacteria 17573
62 Ga0395899_0027381 3300037312 Bacteria 4299
63 Ga0395900_0015713 3300037418 Bacteria 7718
64 Ga0395900_0039395 3300037418 Bacteria 4869
65 Ga0395900_0184187 3300037418 Bacteria 2120
66 Ga0395900_0372229 3300037418 Unclassified 1398
67 Ga0395898_0013877 3300037466 Bacteria 8280
68 Ga0395898_0151976 3300037466 Unclassified 2214
69 Ga0395905_0110767 3300037471 Bacteria 2578
70 Ga0395901_0004055 3300038443 Bacteria 14747
71 Ga0395901_0019537 3300038443 Bacteria 6925
72 Ga0395901_0036520 3300038443 Bacteria 5080
73 Ga0436365_0175961 3300039437 Bacteria 4216
74 Ga0436363_0167910 3300039450 Bacteria 1600
75 Ga0451798_0052884 3300041458 Bacteria 2316
76 Ga0451800_1163797 3300041459 Bacteria 6321
77 Ga0451802_1364757 3300041460 Bacteria 3803
78 Ga0451804_0287572 3300041463 Bacteria 3791
79 Ga0451807_2145066 3300041486 Bacteria 3696
80 Ga0451835_0765434 3300041492 Bacteria 4736
81 Ga0451845_0100244 3300041501 Bacteria 3651
82 Ga0451847_0592904 3300041503 Bacteria 4099
83 Ga0451851_0164941 3300041507 Bacteria 1879
84 Ga0466969_0030006 3300044656 Bacteria 2773
85 Ga0466965_0029677 3300044683 Bacteria 2662
86 Ga0466961_0010605 3300044693 Bacteria 5880
87 Ga0466961_0031423 3300044693 Bacteria 3413
88 Ga0466963_0000646 3300044694 Bacteria 16751
89 Ga0466963_0001204 3300044694 Bacteria 13617
90 Ga0466963_0010224 3300044694 Bacteria 5675
91 Ga0466963_0019409 3300044694 Bacteria 4263
92 Ga0466963_0031425 3300044694 Bacteria 3432
93 Ga0466963_0035074 3300044694 Bacteria 3267
94 Ga0466964_0012969 3300044706 Bacteria 3157
95 Ga0466964_0090258 3300044706 Bacteria 1332
96 Ga0466971_0004290 3300044719 Bacteria 6145
97 Ga0466971_0010896 3300044719 Bacteria 3976
98 Ga0466968_0011281 3300044735 Bacteria 3479
99 Ga0466968_0023904 3300044735 Bacteria 2494
100 Ga0466968_0028675 3300044735 Bacteria 2297
101 Ga0466970_0017649 3300044765 Bacteria 3688
102 Ga0466957_0008920 3300044842 Bacteria 5715
103 Ga0466957_0045535 3300044842 Bacteria 2661
104 Ga0466957_0113823 3300044842 Bacteria 1718
105 Ga0466960_0050071 3300044901 Bacteria 2013
106 Ga0466959_0000796 3300045049 Bacteria 18577
107 Ga0466959_0012539 3300045049 Bacteria 6129
108 Ga0466959_0013801 3300045049 Bacteria 5865
109 Ga0466959_0145047 3300045049 Bacteria 1676
110 Ga0466958_0016875 3300045836 Bacteria 4213
111 Ga0466967_0002130 3300045976 Bacteria 12131
112 Ga0466967_0003863 3300045976 Bacteria 9925
113 Ga0466967_0009057 3300045976 Bacteria 7359
114 Ga0466967_0010020 3300045976 Bacteria 7078
115 Ga0466967_0012820 3300045976 Bacteria 6441
116 Ga0466967_0020783 3300045976 Bacteria 5316
117 Ga0466967_0021772 3300045976 Bacteria 5216
118 Ga0466967_0031952 3300045976 Bacteria 4439
119 Ga0466967_0057107 3300045976 Bacteria 3444
120 Ga0466967_0152326 3300045976 Bacteria 2162
121 Ga0466967_0184107 3300045976 Bacteria 1971
122 Ga0466967_0216655 3300045976 Bacteria 1817
123 Ga0466967_0359612 3300045976 Bacteria 1410
124 Ga0495592_0000206 3300046454 Bacteria 50513
125 Ga0495592_0008714 3300046454 Bacteria 7613
126 Ga0495641_0004897 3300046461 Bacteria 9276
127 Ga0495651_0000053 3300046462 Bacteria 85191
128 Ga0495651_0050443 3300046462 Bacteria 3210
129 Ga0495651_0057843 3300046462 Bacteria 2976
130 Ga0495653_0014692 3300046463 Bacteria 6388
131 Ga0495653_0023311 3300046463 Bacteria 5003
132 Ga0495653_0023822 3300046463 Bacteria 4941
133 Ga0495653_0068365 3300046463 Unclassified 2665
134 Ga0495582_0001695 3300046473 Bacteria 12433
135 Ga0495582_0103925 3300046473 Bacteria 1592
136 Ga0495639_0012734 3300046475 Bacteria 3628
137 Ga0495662_0001977 3300046476 Bacteria 10283
138 Ga0495664_0002216 3300046477 Bacteria 10393
139 Ga0495608_0003105 3300046511 Bacteria 11871
140 Ga0495608_0088551 3300046511 Bacteria 2004
141 Ga0495608_0115068 3300046511 Bacteria 1727
142 Ga0495618_0013192 3300046514 Bacteria 5027
143 Ga0495618_0075961 3300046514 Unclassified 2140
144 Ga0495628_0000047 3300046516 Bacteria 97852
145 Ga0495628_0012267 3300046516 Bacteria 7223
146 Ga0495628_0171285 3300046516 Unclassified 1646
147 Ga0495630_0017737 3300046517 Bacteria 5220
148 Ga0495666_0000946 3300046526 Bacteria 13659
149 Ga0495652_0000291 3300046529 Bacteria 59608
150 Ga0495652_0026269 3300046529 Bacteria 5146
151 Ga0495652_0092071 3300046529 Bacteria 2477
152 Ga0495652_0196035 3300046529 Unclassified 1537
153 Ga0495665_0010374 3300046531 Bacteria 5040
154 Ga0495640_0008410 3300046533 Bacteria 8093
155 Ga0495586_0002035 3300046535 Bacteria 10979
156 Ga0495587_0000756 3300046536 Bacteria 21566
157 Ga0495587_0040796 3300046536 Unclassified 2772
158 Ga0495587_0070014 3300046536 Unclassified 2042
159 Ga0495645_0000302 3300046543 Bacteria 35690
160 Ga0495645_0044504 3300046543 Bacteria 3238
161 Ga0495667_0007286 3300046559 Bacteria 7507
162 Ga0495667_0018658 3300046559 Bacteria 4685
163 Ga0495634_0009238 3300046642 Bacteria 7276
164 Ga0495635_0006681 3300046663 Bacteria 8057
165 Ga0495635_0008171 3300046663 Bacteria 7308
166 Ga0495635_0011153 3300046663 Bacteria 6301
167 Ga0495635_0086163 3300046663 Unclassified 2149
168 Ga0495657_0006385 3300046675 Bacteria 9227
169 Ga0495657_0071794 3300046675 Unclassified 2259
170 Ga0495599_0000063 3300046678 Bacteria 73690
171 Ga0495599_0012445 3300046678 Bacteria 5245
172 Ga0495599_0012822 3300046678 Bacteria 5173
173 Ga0495623_0000132 3300046679 Bacteria 45369
174 Ga0495623_0019887 3300046679 Bacteria 4341
175 Ga0495646_0000560 3300046680 Bacteria 20144
176 Ga0495646_0064279 3300046680 Bacteria 2176
177 Ga0495646_0137191 3300046680 Bacteria 1371
178 Ga0495647_0000087 3300046681 Bacteria 22819
179 Ga0495658_0002917 3300046683 Bacteria 8584
180 Ga0495613_0025530 3300046689 Bacteria 4402
181 Ga0495624_0002054 3300046690 Bacteria 15334
182 Ga0495600_0007877 3300046809 Bacteria 6525
183 Ga0495600_0011461 3300046809 Bacteria 5525
184 Ga0495581_0006550 3300047315 Bacteria 6748
185 Ga0495604_0000004 3300047317 Bacteria 456385
186 Ga0495604_0012176 3300047317 Bacteria 6837
187 Ga0495604_0112720 3300047317 Unclassified 1981
188 Ga0495674_0015821 3300047319 Bacteria 7043
189 Ga0495674_0030863 3300047319 Bacteria 4870
190 Ga0495674_0047030 3300047319 Bacteria 3827
191 Ga0495676_0010402 3300047321 Bacteria 8440
192 Ga0495680_0008102 3300047322 Bacteria 9575
193 Ga0495680_0009215 3300047322 Bacteria 8898
194 Ga0495680_0021491 3300047322 Bacteria 5400
195 Ga0495680_0248904 3300047322 Bacteria 1260
196 Ga0495675_0000075 3300047444 Bacteria 69347
197 Ga0495675_0016939 3300047444 Bacteria 4612
198 Ga0495684_0015778 3300047471 Bacteria 5813
199 Ga0495684_0019676 3300047471 Bacteria 5201
200 Ga0495684_0046150 3300047471 Unclassified 3333
201 Ga0495684_0161609 3300047471 Bacteria 1670
202 Ga0495593_0006225 3300047673 Bacteria 7013
203 Ga0495602_0000524 3300048088 Bacteria 35765
204 Ga0495602_0081555 3300048088 Bacteria 2719
205 Ga0495602_0106997 3300048088 Bacteria 2281
206 Ga0495614_0000404 3300048089 Bacteria 17590
207 Ga0496100_0029211 3300048903 Bacteria 3408
208 Ga0496101_0034498 3300048904 Bacteria 3574
209 Ga0496101_0042268 3300048904 Bacteria 3253
210 Ga0496102_0011993 3300048905 Bacteria 7488
211 Ga0496102_0031591 3300048905 Bacteria 4751
212 Ga0496103_0017586 3300048906 Bacteria 4279
213 Ga0496104_0004691 3300048907 Bacteria 11902
214 Ga0496104_0031791 3300048907 Bacteria 4910
215 Ga0496104_0417666 3300048907 Bacteria 1254
216 Ga0496105_0018951 3300048908 Bacteria 5544
217 Ga0496105_0021364 3300048908 Bacteria 5238
218 Ga0496105_0103304 3300048908 Unclassified 2353
219 Ga0496106_0144201 3300048909 Bacteria 1875
220 Ga0496107_0010949 3300048910 Bacteria 6310
221 Ga0496108_0002918 3300048911 Bacteria 13747
222 Ga0496108_0091873 3300048911 Bacteria 2580
223 Ga0496109_0036267 3300048912 Bacteria 4450
224 Ga0496111_0009369 3300048914 Bacteria 6531
225 Ga0496112_0020352 3300048915 Bacteria 6289
226 Ga0496112_0024997 3300048915 Bacteria 5731
227 Ga0496114_0052921 3300048917 Bacteria 3383
228 Ga0496114_0080156 3300048917 Bacteria 2757
229 Ga0496115_0019971 3300048918 Bacteria 5162
230 Ga0501047_0163777 3300049581 Bacteria 2095
231 Ga0501067_0038170 3300049583 Bacteria 2667
232 Ga0501069_0037873 3300049585 Bacteria 2661
233 Ga0501070_0000389 3300049586 Bacteria 40369
234 Ga0501070_0061037 3300049586 Bacteria 3124
235 Ga0501070_0224613 3300049586 Bacteria 1539
236 Ga0501070_0251680 3300049586 Bacteria 1445
237 Ga0501044_0194840 3300049823 Bacteria 1987
238 Ga0495601_0000148 3300053077 Bacteria 40030
239 Ga0495601_0019933 3300053077 Bacteria 4093
240 Ga0495601_0058582 3300053077 Bacteria 2441
241 Ga0495601_0086403 3300053077 Unclassified 2015
242 Ga0495601_0093362 3300053077 Bacteria 1938
243 Ga0495612_0001636 3300053078 Bacteria 9219
244 Ga0495612_0013215 3300053078 Bacteria 3325
245 Ga0495595_0004679 3300053084 Bacteria 5506
246 Ga0495619_0002671 3300053085 Bacteria 11665
247 Ga0495619_0006045 3300053085 Bacteria 7670
248 Ga0495619_0008120 3300053085 Bacteria 6643
249 Ga0495619_0012862 3300053085 Bacteria 5271
250 Ga0495619_0016977 3300053085 Bacteria 4612
251 Ga0495619_0067181 3300053085 Bacteria 2393
252 Ga0495619_0125104 3300053085 Unclassified 1764
253 Ga0500566_0076309 3300053094 Unclassified 1873
254 Ga0466962_0001710 3300061719 Bacteria 10307
255 Ga0466958_0039164
256 Ga0070658_10044999
257 Ga0070680_100063996
258 Ga0070691_10076395
259 Ga0070713_100059792
260 Ga0070713_100134764
261 Ga0070713_100200568
262 Ga0070681_10055628
263 Ga0070684_100045152
264 Ga0070684_100095202
265 Ga0070695_100005393
266 Ga0068855_100008137
267 Ga0068852_100078140
268 Ga0070717_10006676
269 Ga0070717_10061441
270 Ga0070712_100018353
271 Ga0105240_10031090
272 Ga0105240_10040113
273 Ga0105240_10070906
274 Ga0105237_10031467
275 Ga0157370_10018649
276 Ga0157369_10015107
277 Ga0157369_10183482
278 Ga0163163_10287831
279 Ga0197907_10130136
280 Ga0197907_10894318
281 Ga0206349_1469105
282 Ga0206352_10135586
283 Ga0206354_10229897
284 Ga0206354_10756903
285 Ga0206353_10216091
286 Ga0224712_10012407
287 Ga0207705_10009970
288 Ga0207707_10120484
289 Ga0207695_10032613
290 Ga0207695_10046679
291 Ga0207671_10202477
292 Ga0207693_10017613
293 Ga0207693_10176305
294 Ga0207660_10049405
295 Ga0207657_10069800
296 Ga0207700_10021944
297 Ga0207664_10025996
298 Ga0207667_10047825
299 Ga0265338_10013887
300 Ga0265320_10079820
301 Ga0265325_10058352
302 Ga0265327_10025488
303 Ga0265313_10004556
304 Ga0265314_10003428
305 Ga0373943_0000441
306 Ga0373946_0002480
307 Ga0373955_0134489
308 Ga0373935_0040923
309 Ga0373933_0012436
310 Ga0373933_0051119
311 Ga0373947_0004964
312 Ga0373937_0000190
313 Ga0373937_0023422
314 Ga0373937_0178121
315 Ga0373925_0001857
316 Ga0395899_0027381
317 Ga0395900_0015713
318 Ga0395900_0039395
319 Ga0395900_0184187
320 Ga0395900_0372229
321 Ga0395898_0013877
322 Ga0395898_0151976
323 Ga0395905_0110767
324 Ga0395901_0004055
325 Ga0395901_0019537
326 Ga0395901_0036520
327 Ga0436365_0175961
328 Ga0436363_0167910
329 Ga0451798_0052884
330 Ga0451800_1163797
331 Ga0451802_1364757
332 Ga0451804_0287572
333 Ga0451807_2145066
334 Ga0451835_0765434
335 Ga0451845_0100244
336 Ga0451847_0592904
337 Ga0451851_0164941
338 Ga0466969_0030006
339 Ga0466965_0029677
340 Ga0466961_0010605
341 Ga0466961_0031423
342 Ga0466963_0000646
343 Ga0466963_0001204
344 Ga0466963_0010224
345 Ga0466963_0019409
346 Ga0466963_0031425
347 Ga0466963_0035074
348 Ga0466964_0012969
349 Ga0466964_0090258
350 Ga0466971_0004290
351 Ga0466971_0010896
352 Ga0466968_0011281
353 Ga0466968_0023904
354 Ga0466968_0028675
355 Ga0466970_0017649
356 Ga0466957_0008920
357 Ga0466957_0045535
358 Ga0466957_0113823
359 Ga0466960_0050071
360 Ga0466959_0000796
361 Ga0466959_0012539
362 Ga0466959_0013801
363 Ga0466959_0145047
364 Ga0466958_0016875
365 Ga0466967_0002130
366 Ga0466967_0003863
367 Ga0466967_0009057
368 Ga0466967_0010020
369 Ga0466967_0012820
370 Ga0466967_0020783
371 Ga0466967_0021772
372 Ga0466967_0031952
373 Ga0466967_0057107
374 Ga0466967_0152326
375 Ga0466967_0184107
376 Ga0466967_0216655
377 Ga0466967_0359612
378 Ga0495592_0000206
379 Ga0495592_0008714
380 Ga0495641_0004897
381 Ga0495651_0000053
382 Ga0495651_0050443
383 Ga0495651_0057843
384 Ga0495653_0014692
385 Ga0495653_0023311
386 Ga0495653_0023822
387 Ga0495653_0068365
388 Ga0495582_0001695
389 Ga0495582_0103925
390 Ga0495639_0012734
391 Ga0495662_0001977
392 Ga0495664_0002216
393 Ga0495608_0003105
394 Ga0495608_0088551
395 Ga0495608_0115068
396 Ga0495618_0013192
397 Ga0495618_0075961
398 Ga0495628_0000047
399 Ga0495628_0012267
400 Ga0495628_0171285
401 Ga0495630_0017737
402 Ga0495666_0000946
403 Ga0495652_0000291
404 Ga0495652_0026269
405 Ga0495652_0092071
406 Ga0495652_0196035
407 Ga0495665_0010374
408 Ga0495640_0008410
409 Ga0495586_0002035
410 Ga0495587_0000756
411 Ga0495587_0040796
412 Ga0495587_0070014
413 Ga0495645_0000302
414 Ga0495645_0044504
415 Ga0495667_0007286
416 Ga0495667_0018658
417 Ga0495634_0009238
418 Ga0495635_0006681
419 Ga0495635_0008171
420 Ga0495635_0011153
421 Ga0495635_0086163
422 Ga0495657_0006385
423 Ga0495657_0071794
424 Ga0495599_0000063
425 Ga0495599_0012445
426 Ga0495599_0012822
427 Ga0495623_0000132
428 Ga0495623_0019887
429 Ga0495646_0000560
430 Ga0495646_0064279
431 Ga0495646_0137191
432 Ga0495647_0000087
433 Ga0495658_0002917
434 Ga0495613_0025530
435 Ga0495624_0002054
436 Ga0495600_0007877
437 Ga0495600_0011461
438 Ga0495581_0006550
439 Ga0495604_0000004
440 Ga0495604_0012176
441 Ga0495604_0112720
442 Ga0495674_0015821
443 Ga0495674_0030863
444 Ga0495674_0047030
445 Ga0495676_0010402
446 Ga0495680_0008102
447 Ga0495680_0009215
448 Ga0495680_0021491
449 Ga0495680_0248904
450 Ga0495675_0000075
451 Ga0495675_0016939
452 Ga0495684_0015778
453 Ga0495684_0019676
454 Ga0495684_0046150
455 Ga0495684_0161609
456 Ga0495593_0006225
457 Ga0495602_0000524
458 Ga0495602_0081555
459 Ga0495602_0106997
460 Ga0495614_0000404
461 Ga0496100_0029211
462 Ga0496101_0034498
463 Ga0496101_0042268
464 Ga0496102_0011993
465 Ga0496102_0031591
466 Ga0496103_0017586
467 Ga0496104_0004691
468 Ga0496104_0031791
469 Ga0496104_0417666
470 Ga0496105_0018951
471 Ga0496105_0021364
472 Ga0496105_0103304
473 Ga0496106_0144201
474 Ga0496107_0010949
475 Ga0496108_0002918
476 Ga0496108_0091873
477 Ga0496109_0036267
478 Ga0496111_0009369
479 Ga0496112_0020352
480 Ga0496112_0024997
481 Ga0496114_0052921
482 Ga0496114_0080156
483 Ga0496115_0019971
484 Ga0501047_0163777
485 Ga0501067_0038170
486 Ga0501069_0037873
487 Ga0501070_0000389
488 Ga0501070_0061037
489 Ga0501070_0224613
490 Ga0501070_0251680
491 Ga0501044_0194840
492 Ga0495601_0000148
493 Ga0495601_0019933
494 Ga0495601_0058582
495 Ga0495601_0086403
496 Ga0495601_0093362
497 Ga0495612_0001636
498 Ga0495612_0013215
499 Ga0495595_0004679
500 Ga0495619_0002671
501 Ga0495619_0006045
502 Ga0495619_0008120
503 Ga0495619_0012862
504 Ga0495619_0016977
505 Ga0495619_0067181
506 Ga0495619_0125104
507 Ga0500566_0076309
508 Ga0466962_0001710

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13458

Peripla_BP_6

Periplasmic binding protein

39

415

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lop-assembly1.cif.gz_A crystal structure of substrate-binding periplasmic protein (pbp) from ralstonia solanacearum 0.909 19 369
4evr-assembly1.cif.gz_A crystal structure of abc transporter from r. palustris - solute binding protein (rpa0668) in complex with benzoate 0.8824 19 384
3lop-assembly1.cif.gz_A crystal structure of substrate-binding periplasmic protein (pbp) from ralstonia solanacearum 0.8822 19 369
3lkb-assembly1.cif.gz_A crystal structure of a branched chain amino acid abc transporter from thermus thermophilus with bound valine 0.8699 15 383
4kv7-assembly1.cif.gz_A the crystal structure of a possible leucine/isoleucine/valine-binding protein from rhodopirellula baltica sh 1 0.8538 9 379
ID Description Score Start End Superfamily
3sg0A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8885 144 270 3.40.50.2300
4evqB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8748 141 269 3.40.50.2300
1usiA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.872 141 268 3.40.50.2300
4n0qA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8606 141 268 3.40.50.2300
3lopA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8552 19 358 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A1M7UAQ2-F1-model_v4 Amino acid/amide ABC transporter substrate-binding protein, HAAT family 0.9692 17 383
AF-A0A845IZF7-F1-model_v4 deleted 0.966 11 384
AF-A0A535LJ55-F1-model_v4 Branched-chain amino acid ABC transporter substrate-binding protein 0.963 133 383
AF-A0A538J8B4-F1-model_v4 Branched-chain amino acid ABC transporter substrate-binding protein 0.9626 15 384
AF-A0A538JJ64-F1-model_v4 ABC transporter substrate-binding protein 0.9609 2 386 GO:0016020

Map