F365005

General Info

Members Datasets Scaffolds Average Seq Length
254 147 249 526

Family's Representative Sequence

Representative Sequence 3300031911|Ga0307412_10003129|Ga0307412_100031299
Length 563
Sequence MPKRIAPVNALRALFCTHSVPPSHFGGKPMRRAVLAFTAALLASAPIAAQTIQTPATDRVIDQGTNHSEVMRIAQYLTDVIGARLTNSPGIRKAEDWTQAKFREWGLVNVHKEGFEFGRGWSNEKLAVRMVAPRPLQLIAAPLPWTPGTSGAVTGEVVLAPLADEAAFAQYKGKLQGKVVLLTEPKDIEDPTEAPFKRWSTEELAKRDFYDLPNGAEGRPFNPARLTFAAKRDAFLKAEGAIGYAIMSSRNGKLVHGQNSQFQVGQSGALPGIEIAAEDYRRLARLAKMGAKPTLEIDAVNRFDDSDTKAYNVLADIPGTDPKAGYVMAGAHLDSWAMGDGAADNAAGSAMVMEAARIIRASGIKTKRAIRFALWAGEEQGLLGSMAYVESHIAKRPVEAGATGMVRYMTWSRAFPITPGPDHGKLAAYFNLDNGSGKIRGIYAQGNTAVMPIFEQWFTPFHTMGATQVSARRTGSTDHVFFDAVGIPAFQFIQDPLDYGSMVHHTDVDTFDHLKADDMRQGALILAAFLINAANSDQPLPRMPMATAPTPADQFYNFPESAH

Samples

Sample ID Description Type Environment
1 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
2 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
3 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
4 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
5 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
8 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
9 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
10 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
25 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
61 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
62 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
103 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
126 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
134 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
139 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
140 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
141 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
142 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
143 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
144 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
145 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
146 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.03
Metatranscriptomes 0
Isolates 1.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.93
Nodule 0
Rhizoplane 1.57
Rhizosphere 76.77
Stem 0
Stem Tuber 0
Unclassified 4.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000658 3300001990 Bacteria 12205
2 JGI25152J39213_1000310 3300002773 Bacteria 31329
3 JGI25150J39212_1000484 3300002774 Bacteria 16815
4 JGI25150J39212_1000768 3300002774 Bacteria 11090
5 JGI25159J45721_1000415 3300002987 Bacteria 19675
6 JGI25151J46595_10007796 3300003187 Bacteria 5207
7 JGI25153J46596_10000147 3300003215 Bacteria 71745
8 JGI25153J46596_10004885 3300003215 Bacteria 7127
9 rootH2_10011343 3300003320 Bacteria 2210
10 Ga0055529_1000095 3300003763 Bacteria 134030
11 Ga0055526_1002623 3300003771 Bacteria 12026
12 Ga0055524_1000716 3300003775 Bacteria 22809
13 Ga0055540_1005268 3300003792 Bacteria 5506
14 Ga0065165_1000005 3300005262 Bacteria 370361
15 Ga0065165_1023339 3300005262 Bacteria 2100
16 Ga0070658_10008451 3300005327 Bacteria 8279
17 Ga0070658_10017540 3300005327 Bacteria 5727
18 Ga0070658_10119492 3300005327 Bacteria 2189
19 Ga0070658_10125205 3300005327 Bacteria 2138
20 Ga0070683_100004808 3300005329 Bacteria 11184
21 Ga0070683_100039119 3300005329 Bacteria 4352
22 Ga0070670_100001385 3300005331 Bacteria 19434
23 Ga0070680_100011326 3300005336 Bacteria 6897
24 Ga0068868_100112267 3300005338 Bacteria 2215
25 Ga0070660_100000699 3300005339 Bacteria 22255
26 Ga0070660_100002330 3300005339 Bacteria 13048
27 Ga0070660_100002604 3300005339 Bacteria 12387
28 Ga0070660_100003322 3300005339 Bacteria 11051
29 Ga0070661_100014189 3300005344 Bacteria 5612
30 Ga0070661_100025023 3300005344 Bacteria 4287
31 Ga0070661_100028307 3300005344 Bacteria 4041
32 Ga0070661_100033485 3300005344 Bacteria 3722
33 Ga0070692_10002855 3300005345 Bacteria 6843
34 Ga0070692_10018308 3300005345 Bacteria 3366
35 Ga0070668_100083078 3300005347 Bacteria 2514
36 Ga0070671_100001896 3300005355 Bacteria 15990
37 Ga0070659_100010242 3300005366 Bacteria 6895
38 Ga0070659_100022574 3300005366 Bacteria 4804
39 Ga0070659_100042650 3300005366 Bacteria 3547
40 Ga0070659_100084272 3300005366 Bacteria 2542
41 Ga0070663_100005267 3300005455 Bacteria 7668
42 Ga0070663_100082879 3300005455 Bacteria 2360
43 Ga0070678_100013121 3300005456 Bacteria 5181
44 Ga0070662_100020000 3300005457 Bacteria 4556
45 Ga0070662_100046695 3300005457 Bacteria 3112
46 Ga0070681_10012286 3300005458 Bacteria 8495
47 Ga0070679_100134307 3300005530 Bacteria 2455
48 Ga0070684_100001781 3300005535 Bacteria 15732
49 Ga0070684_100026673 3300005535 Bacteria 4869
50 Ga0068853_100156734 3300005539 Bacteria 2052
51 Ga0070672_100120757 3300005543 Bacteria 2144
52 Ga0070686_100000326 3300005544 Bacteria 31291
53 Ga0070665_100003716 3300005548 Bacteria 16154
54 Ga0070665_100096491 3300005548 Bacteria 2961
55 Ga0068855_100007245 3300005563 Bacteria 13450
56 Ga0070664_100000247 3300005564 Bacteria 38997
57 Ga0070664_100028332 3300005564 Bacteria 4659
58 Ga0070664_100037158 3300005564 Bacteria 4092
59 Ga0068857_100005241 3300005577 Bacteria 11038
60 Ga0068857_100022162 3300005577 Bacteria 5587
61 Ga0068857_100147663 3300005577 Bacteria 2128
62 Ga0068854_100004608 3300005578 Bacteria 8697
63 Ga0068856_100011979 3300005614 Bacteria 8398
64 Ga0068856_100058963 3300005614 Bacteria 3791
65 Ga0068852_100045850 3300005616 Bacteria 3721
66 Ga0068851_10017604 3300005834 Bacteria 3434
67 Ga0068851_10021119 3300005834 Bacteria 3159
68 Ga0068863_100126552 3300005841 Bacteria 2438
69 Ga0068860_100002208 3300005843 Bacteria 20485
70 Ga0068862_100055324 3300005844 Bacteria 3398
71 Ga0097621_100156669 3300006237 Bacteria 1955
72 Ga0105240_10013471 3300009093 Bacteria 11231
73 Ga0105245_10146423 3300009098 Bacteria 2228
74 Ga0105237_10031108 3300009545 Bacteria 5414
75 Ga0105246_10019147 3300011119 Bacteria 4370
76 Ga0157373_10047138 3300013100 Bacteria 3075
77 Ga0157371_10016331 3300013102 Bacteria 5545
78 Ga0157371_10043126 3300013102 Bacteria 3214
79 Ga0157370_10005621 3300013104 Bacteria 14024
80 Ga0157370_10152531 3300013104 Bacteria 2150
81 Ga0157369_10014632 3300013105 Bacteria 8851
82 Ga0157369_10039412 3300013105 Bacteria 5163
83 Ga0157369_10041932 3300013105 Bacteria 4994
84 Ga0163163_10007601 3300014325 Bacteria 9573
85 Ga0209436_102599 3300025208 Bacteria 5307
86 Ga0207425_1000013 3300025245 Bacteria 497384
87 Ga0207425_1000019 3300025245 Bacteria 399942
88 Ga0209129_1000106 3300025258 Bacteria 156102
89 Ga0209565_1000062 3300025263 Bacteria 184007
90 Ga0209455_1000121 3300025272 Bacteria 173350
91 Ga0209673_1008019 3300025273 Bacteria 4756
92 Ga0209130_1000084 3300025284 Bacteria 160070
93 Ga0209676_1011153 3300025292 Bacteria 3655
94 Ga0209025_1000472 3300025294 Bacteria 78081
95 Ga0209564_1000361 3300025295 Bacteria 84398
96 Ga0209758_1000019 3300025297 Bacteria 743682
97 Ga0209758_1000031 3300025297 Bacteria 497252
98 Ga0209050_1000001 3300025298 Bacteria 3563507
99 Ga0209050_1000108 3300025298 Bacteria 222534
100 Ga0209256_1000333 3300025299 Bacteria 78935
101 Ga0207426_1012002 3300025302 Bacteria 3274
102 Ga0209051_1000109 3300025303 Bacteria 153862
103 Ga0209257_1001075 3300025304 Bacteria 35984
104 Ga0209257_1012583 3300025304 Bacteria 3890
105 Ga0207647_10001105 3300025904 Bacteria 20793
106 Ga0207647_10035847 3300025904 Bacteria 3157
107 Ga0207705_10000358 3300025909 Bacteria 41389
108 Ga0207705_10004864 3300025909 Bacteria 10083
109 Ga0207705_10030547 3300025909 Bacteria 3844
110 Ga0207705_10113021 3300025909 Bacteria 2008
111 Ga0207695_10036377 3300025913 Bacteria 5323
112 Ga0207671_10006822 3300025914 Bacteria 10089
113 Ga0207657_10002038 3300025919 Bacteria 21847
114 Ga0207657_10002527 3300025919 Bacteria 19795
115 Ga0207657_10004236 3300025919 Bacteria 15201
116 Ga0207657_10009061 3300025919 Bacteria 10049
117 Ga0207657_10039882 3300025919 Bacteria 4167
118 Ga0207657_10058816 3300025919 Bacteria 3306
119 Ga0207649_10041844 3300025920 Bacteria 2791
120 Ga0207649_10057892 3300025920 Bacteria 2425
121 Ga0207649_10058033 3300025920 Bacteria 2422
122 Ga0207652_10010347 3300025921 Bacteria 7514
123 Ga0207652_10133493 3300025921 Bacteria 2215
124 Ga0207681_10017942 3300025923 Bacteria 4451
125 Ga0207644_10002127 3300025931 Bacteria 12857
126 Ga0207690_10035869 3300025932 Bacteria 3208
127 Ga0207690_10058518 3300025932 Bacteria 2607
128 Ga0207706_10053895 3300025933 Bacteria 3550
129 Ga0207704_10069742 3300025938 Bacteria 2223
130 Ga0207661_10073427 3300025944 Bacteria 2801
131 Ga0207661_10159605 3300025944 Bacteria 1955
132 Ga0207679_10035228 3300025945 Bacteria 3539
133 Ga0207679_10080071 3300025945 Bacteria 2493
134 Ga0207667_10021018 3300025949 Bacteria 7238
135 Ga0207651_10048248 3300025960 Bacteria 2877
136 Ga0207677_10002473 3300026023 Bacteria 9698
137 Ga0207639_10049182 3300026041 Bacteria 3195
138 Ga0207678_10001327 3300026067 Bacteria 22849
139 Ga0207678_10005540 3300026067 Bacteria 11280
140 Ga0207678_10019409 3300026067 Bacteria 5972
141 Ga0207678_10023193 3300026067 Bacteria 5428
142 Ga0207678_10030867 3300026067 Bacteria 4678
143 Ga0207678_10033543 3300026067 Bacteria 4471
144 Ga0207702_10074577 3300026078 Bacteria 2929
145 Ga0207674_10000758 3300026116 Bacteria 42236
146 Ga0207674_10003891 3300026116 Bacteria 18169
147 Ga0207683_10006320 3300026121 Bacteria 10147
148 Ga0207698_10001764 3300026142 Bacteria 12618
149 Ga0207698_10046719 3300026142 Bacteria 3272
150 Ga0268266_10001503 3300028379 Bacteria 27580
151 Ga0268266_10006049 3300028379 Bacteria 11152
152 Ga0268265_10039955 3300028380 Bacteria 3461
153 Ga0268265_10042964 3300028380 Bacteria 3357
154 Ga0268264_10020676 3300028381 Bacteria 5377
155 Ga0307408_100015707 3300031548 Bacteria 5044
156 Ga0307516_10025678 3300031730 Bacteria 5996
157 Ga0307405_10007163 3300031731 Bacteria 5549
158 Ga0307405_10087939 3300031731 Bacteria 2049
159 Ga0307413_10002695 3300031824 Bacteria 7281
160 Ga0307413_10003770 3300031824 Bacteria 6456
161 Ga0307413_10007453 3300031824 Bacteria 5083
162 Ga0307413_10094253 3300031824 Bacteria 1959
163 Ga0307406_10000523 3300031901 Bacteria 22089
164 Ga0307412_10003129 3300031911 Bacteria 9193
165 Ga0307412_10027733 3300031911 Bacteria 3535
166 Ga0307409_100101558 3300031995 Bacteria 2387
167 Ga0307416_100001639 3300032002 Bacteria 12337
168 Ga0307414_10025695 3300032004 Bacteria 3777
169 Ga0307411_10004407 3300032005 Bacteria 6735
170 Ga0307411_10004560 3300032005 Bacteria 6659
171 Ga0307411_10009325 3300032005 Bacteria 5153
172 Ga0307411_10077673 3300032005 Bacteria 2273
173 Ga0307415_100003563 3300032126 Bacteria 7947
174 Ga0373937_0018477 3300036401 Bacteria 6228
175 Ga0395899_0000296 3300037312 Bacteria 64048
176 Ga0395899_0004902 3300037312 Bacteria 10405
177 Ga0395899_0022439 3300037312 Bacteria 4787
178 Ga0395899_0033793 3300037312 Bacteria 3841
179 Ga0395899_0038806 3300037312 Bacteria 3566
180 Ga0395899_0045890 3300037312 Bacteria 3255
181 Ga0395900_0000036 3300037418 Bacteria 250619
182 Ga0395900_0000693 3300037418 Bacteria 44924
183 Ga0395900_0001457 3300037418 Bacteria 28209
184 Ga0395900_0002121 3300037418 Bacteria 22192
185 Ga0395900_0003419 3300037418 Bacteria 17161
186 Ga0395900_0010742 3300037418 Bacteria 9366
187 Ga0395900_0051063 3300037418 Bacteria 4260
188 Ga0395900_0063847 3300037418 Bacteria 3785
189 Ga0395900_0072483 3300037418 Bacteria 3541
190 Ga0395898_0002010 3300037466 Bacteria 25526
191 Ga0395898_0018361 3300037466 Bacteria 7133
192 Ga0395898_0020283 3300037466 Bacteria 6751
193 Ga0395898_0025969 3300037466 Bacteria 5898
194 Ga0395905_0000264 3300037471 Bacteria 78482
195 Ga0395905_0005418 3300037471 Bacteria 13038
196 Ga0395905_0010164 3300037471 Bacteria 9171
197 Ga0395905_0012199 3300037471 Bacteria 8277
198 Ga0395905_0017721 3300037471 Bacteria 6761
199 Ga0395905_0078291 3300037471 Bacteria 3098
200 Ga0395905_0084516 3300037471 Bacteria 2973
201 Ga0395901_0000036 3300038443 Bacteria 214274
202 Ga0395901_0000188 3300038443 Bacteria 78908
203 Ga0395901_0000507 3300038443 Bacteria 45109
204 Ga0395901_0001944 3300038443 Bacteria 21267
205 Ga0395901_0005266 3300038443 Bacteria 13062
206 Ga0395901_0007867 3300038443 Bacteria 10750
207 Ga0395901_0016737 3300038443 Bacteria 7471
208 Ga0395901_0031570 3300038443 Bacteria 5461
209 Ga0395901_0049516 3300038443 Bacteria 4366
210 Ga0395901_0056210 3300038443 Bacteria 4094
211 Ga0395901_0058143 3300038443 Bacteria 4022
212 Ga0395901_0104989 3300038443 Bacteria 2965
213 Ga0436365_0347548 3300039437 Bacteria 6549
214 Ga0451577_0000082 3300042876 Bacteria 214418
215 Ga0466964_0009601 3300044706 Bacteria 3644
216 Ga0453684_0001652 3300044712 Bacteria 60494
217 Ga0453684_0049524 3300044712 Bacteria 5539
218 Ga0453684_0058276 3300044712 Bacteria 4989
219 Ga0466968_0010291 3300044735 Bacteria 3624
220 Ga0466959_0004576 3300045049 Bacteria 9286
221 Ga0466967_0056006 3300045976 Bacteria 3475
222 Ga0495606_0000594 3300046507 Bacteria 57221
223 Ga0495668_0000093 3300046616 Bacteria 142565
224 Ga0495670_0000025 3300046691 Bacteria 91556
225 Ga0495660_0012659 3300046810 Bacteria 4897
226 Ga0495686_0000501 3300047472 Bacteria 57359
227 Ga0495686_0001465 3300047472 Bacteria 25695
228 Ga0495686_0001944 3300047472 Bacteria 20572
229 Ga0496114_0000019 3300048917 Bacteria 244365
230 Ga0496115_0000315 3300048918 Bacteria 41080
231 Ga0496115_0004377 3300048918 Bacteria 10231
232 Ga0496121_0000017 3300048924 Bacteria 546415
233 Ga0496122_0001855 3300048925 Bacteria 32228
234 Ga0496123_0000111 3300048926 Bacteria 164592
235 Ga0496123_0029575 3300048926 Bacteria 4028
236 Ga0496124_0000761 3300048927 Bacteria 52586
237 Ga0496124_0006370 3300048927 Bacteria 12874
238 Ga0496126_0036574 3300048929 Bacteria 4589
239 Ga0501047_0088810 3300049581 Bacteria 2968
240 Ga0500643_002010 3300053087 Bacteria 10950
241 Ga0500566_0007129 3300053094 Bacteria 6621
242 Ga0500554_000226 3300053102 Bacteria 12069
243 Ga0500595_001639 3300053119 Bacteria 11759
244 Ga0500608_050347 3300053122 Bacteria 2002
245 Ga0500614_000023 3300053123 Bacteria 36107
246 Ga0500618_000566 3300053125 Bacteria 22946
247 Ga0500559_0007692 3300053136 Bacteria 4758
248 Ga0500604_0000002 3300053151 Bacteria 165603
249 Ga0500616_0014370 3300053153 Bacteria 4551

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005564 Ga0070664_100028332 Ga0070664_1000283325 422
2 3300003320 rootH2_10011343 rootH2_100113433 447
3 3300044712 Ga0453684_0058276 Ga0453684_0058276_1020_2516 450
4 3300044712 Ga0453684_0049524 Ga0453684_0049524_356_1849 465
5 3300042876 Ga0451577_0000082 Ga0451577_0000082_154926_156422 467
6 3300044712 Ga0453684_0001652 Ga0453684_0001652_41433_42929 467
7 3300053153 Ga0500616_0014370 Ga0500616_0014370_1232_2839 481
8 3300037471 Ga0395905_0017721 Ga0395905_0017721_1324_2826 484
9 3300048917 Ga0496114_0000019 Ga0496114_0000019_81817_83409 491
10 3300005544 Ga0070686_100000326 Ga0070686_10000032614 493
11 3300048918 Ga0496115_0004377 Ga0496115_0004377_1950_3518 495
12 3300002773 JGI25152J39213_1000310 JGI25152J39213_100031017 497
13 3300002774 JGI25150J39212_1000768 JGI25150J39212_10007687 497
14 3300003215 JGI25153J46596_10004885 JGI25153J46596_100048852 497
15 3300003775 Ga0055524_1000716 Ga0055524_100071617 497
16 3300025245 Ga0207425_1000013 Ga0207425_1000013310 497
17 3300025258 Ga0209129_1000106 Ga0209129_100010641 497
18 3300025297 Ga0209758_1000031 Ga0209758_1000031154 497
19 3300025299 Ga0209256_1000333 Ga0209256_100033349 497
20 3300031548 Ga0307408_100015707 Ga0307408_1000157073 498
21 3300031731 Ga0307405_10007163 Ga0307405_100071636 498
22 3300031824 Ga0307413_10007453 Ga0307413_100074532 498
23 3300031901 Ga0307406_10000523 Ga0307406_1000052320 498
24 3300031911 Ga0307412_10027733 Ga0307412_100277332 498
25 3300032002 Ga0307416_100001639 Ga0307416_1000016398 498
26 3300032126 Ga0307415_100003563 Ga0307415_1000035637 498
27 3300005548 Ga0070665_100003716 Ga0070665_10000371610 499
28 3300028379 Ga0268266_10001503 Ga0268266_1000150323 499
29 3300037418 Ga0395900_0010742 Ga0395900_0010742_3650_5251 500
30 3300037471 Ga0395905_0005418 Ga0395905_0005418_1392_2993 500
31 3300038443 Ga0395901_0007867 Ga0395901_0007867_911_2512 500
32 3300048918 Ga0496115_0000315 Ga0496115_0000315_10055_11677 501
33 3300037418 Ga0395900_0051063 Ga0395900_0051063_511_2070 503
34 3300049581 Ga0501047_0088810 Ga0501047_0088810_135_1739 504
35 3300002774 JGI25150J39212_1000484 JGI25150J39212_10004844 507
36 3300003187 JGI25151J46595_10007796 JGI25151J46595_100077963 507
37 3300003215 JGI25153J46596_10000147 JGI25153J46596_1000014720 507
38 3300003792 Ga0055540_1005268 Ga0055540_10052683 507
39 3300025245 Ga0207425_1000019 Ga0207425_100001967 507
40 3300025263 Ga0209565_1000062 Ga0209565_100006212 507
41 3300025273 Ga0209673_1008019 Ga0209673_10080192 507
42 3300025292 Ga0209676_1011153 Ga0209676_10111534 507
43 3300025294 Ga0209025_1000472 Ga0209025_100047275 507
44 3300025297 Ga0209758_1000019 Ga0209758_1000019520 507
45 3300025298 Ga0209050_1000001 Ga0209050_10000011716 507
46 3300025298 Ga0209050_1000108 Ga0209050_10001084 507
47 3300025303 Ga0209051_1000109 Ga0209051_100010972 507
48 3300025304 Ga0209257_1001075 Ga0209257_100107524 507
49 3300025304 Ga0209257_1012583 Ga0209257_10125832 507
50 3300003771 Ga0055526_1002623 Ga0055526_100262310 508
51 3300025295 Ga0209564_1000361 Ga0209564_100036155 508
52 3300005530 Ga0070679_100134307 Ga0070679_1001343072 511
53 3300047472 Ga0495686_0001465 Ga0495686_0001465_22944_24545 511
54 3300013105 Ga0157369_10041932 Ga0157369_100419324 512
55 3300038443 Ga0395901_0016737 Ga0395901_0016737_3438_5024 513
56 3300005347 Ga0070668_100083078 Ga0070668_1000830782 515
57 3300046507 Ga0495606_0000594 Ga0495606_0000594_53394_55001 515
58 3300036401 Ga0373937_0018477 Ga0373937_0018477_1754_3361 516
59 iso_pu_bacteria 2599185359 2600225695 517
60 iso_pu_bacteria 2818991466 2819714129 517
61 iso_pu_bacteria 2928526807 2928528687 517
62 iso_pu_bacteria 2928968154 2928970238 517
63 3300005577 Ga0068857_100005241 Ga0068857_1000052413 518
64 3300005841 Ga0068863_100126552 Ga0068863_1001265522 518
65 3300011119 Ga0105246_10019147 Ga0105246_100191474 518
66 3300014325 Ga0163163_10007601 Ga0163163_100076012 518
67 3300026116 Ga0207674_10000758 Ga0207674_1000075838 518
68 3300031995 Ga0307409_100101558 Ga0307409_1001015582 518
69 3300037418 Ga0395900_0072483 Ga0395900_0072483_345_1946 518
70 3300037471 Ga0395905_0078291 Ga0395905_0078291_1115_2713 518
71 3300038443 Ga0395901_0031570 Ga0395901_0031570_308_1909 518
72 3300038443 Ga0395901_0104989 Ga0395901_0104989_881_2479 518
73 3300046691 Ga0495670_0000025 Ga0495670_0000025_67913_69538 518
74 3300053122 Ga0500608_050347 Ga0500608_050347_283_1887 518
75 3300053151 Ga0500604_0000002 Ga0500604_0000002_163198_164808 518
76 iso_pu_bacteria 2879163058 2879165789 518
77 3300005834 Ga0068851_10017604 Ga0068851_100176042 519
78 3300025919 Ga0207657_10039882 Ga0207657_100398824 519
79 3300025933 Ga0207706_10053895 Ga0207706_100538952 519
80 3300026067 Ga0207678_10033543 Ga0207678_100335432 519
81 3300053125 Ga0500618_000566 Ga0500618_000566_16768_18372 519
82 3300005345 Ga0070692_10018308 Ga0070692_100183081 520
83 3300005455 Ga0070663_100082879 Ga0070663_1000828792 520
84 3300009098 Ga0105245_10146423 Ga0105245_101464232 520
85 3300026023 Ga0207677_10002473 Ga0207677_100024732 520
86 3300026067 Ga0207678_10023193 Ga0207678_100231933 520
87 3300037466 Ga0395898_0025969 Ga0395898_0025969_495_2096 520
88 3300005262 Ga0065165_1023339 Ga0065165_10233392 521
89 3300005327 Ga0070658_10125205 Ga0070658_101252051 521
90 3300005345 Ga0070692_10002855 Ga0070692_100028552 521
91 3300005457 Ga0070662_100046695 Ga0070662_1000466952 521
92 3300005548 Ga0070665_100096491 Ga0070665_1000964912 521
93 3300005577 Ga0068857_100147663 Ga0068857_1001476633 521
94 3300005578 Ga0068854_100004608 Ga0068854_10000460813 521
95 3300009545 Ga0105237_10031108 Ga0105237_100311086 521
96 3300025909 Ga0207705_10113021 Ga0207705_101130212 521
97 3300025914 Ga0207671_10006822 Ga0207671_100068229 521
98 3300025919 Ga0207657_10002527 Ga0207657_1000252712 521
99 3300026142 Ga0207698_10046719 Ga0207698_100467193 521
100 3300028379 Ga0268266_10006049 Ga0268266_100060498 521
101 3300037312 Ga0395899_0000296 Ga0395899_0000296_11036_12637 521
102 3300037418 Ga0395900_0000036 Ga0395900_0000036_202274_203875 521
103 3300037466 Ga0395898_0018361 Ga0395898_0018361_5469_7070 521
104 3300037471 Ga0395905_0010164 Ga0395905_0010164_640_2223 521
105 3300038443 Ga0395901_0000036 Ga0395901_0000036_16023_17624 521
106 3300039437 Ga0436365_0347548 Ga0436365_0347548_1192_2775 521
107 3300048926 Ga0496123_0029575 Ga0496123_0029575_941_2545 521
108 3300048927 Ga0496124_0000761 Ga0496124_0000761_39598_41202 521
109 3300048927 Ga0496124_0006370 Ga0496124_0006370_11047_12651 521
110 3300005331 Ga0070670_100001385 Ga0070670_10000138519 522
111 3300005344 Ga0070661_100033485 Ga0070661_1000334853 522
112 3300005355 Ga0070671_100001896 Ga0070671_1000018965 522
113 3300005456 Ga0070678_100013121 Ga0070678_1000131213 522
114 3300005457 Ga0070662_100020000 Ga0070662_1000200002 522
115 3300005543 Ga0070672_100120757 Ga0070672_1001207572 522
116 3300005564 Ga0070664_100000247 Ga0070664_10000024722 522
117 3300025920 Ga0207649_10058033 Ga0207649_100580332 522
118 3300025931 Ga0207644_10002127 Ga0207644_1000212711 522
119 3300026121 Ga0207683_10006320 Ga0207683_100063204 522
120 3300031730 Ga0307516_10025678 Ga0307516_100256784 523
121 3300046810 Ga0495660_0012659 Ga0495660_0012659_2245_3855 523
122 3300047472 Ga0495686_0000501 Ga0495686_0000501_47898_49505 523
123 3300053094 Ga0500566_0007129 Ga0500566_0007129_4457_6064 523
124 3300053102 Ga0500554_000226 Ga0500554_000226_5414_7021 523
125 3300053119 Ga0500595_001639 Ga0500595_001639_4730_6337 523
126 3300053123 Ga0500614_000023 Ga0500614_000023_29058_30665 523
127 3300053136 Ga0500559_0007692 Ga0500559_0007692_2295_3902 523
128 3300002987 JGI25159J45721_1000415 JGI25159J45721_100041512 524
129 3300005262 Ga0065165_1000005 Ga0065165_1000005316 524
130 3300005327 Ga0070658_10119492 Ga0070658_101194921 524
131 3300005339 Ga0070660_100003322 Ga0070660_1000033222 524
132 3300005344 Ga0070661_100025023 Ga0070661_1000250234 524
133 3300013102 Ga0157371_10043126 Ga0157371_100431262 524
134 3300013104 Ga0157370_10152531 Ga0157370_101525312 524
135 3300025208 Ga0209436_102599 Ga0209436_1025993 524
136 3300025284 Ga0209130_1000084 Ga0209130_1000084108 524
137 3300025302 Ga0207426_1012002 Ga0207426_10120022 524
138 3300025909 Ga0207705_10000358 Ga0207705_1000035838 524
139 3300025919 Ga0207657_10009061 Ga0207657_100090613 524
140 3300025921 Ga0207652_10133493 Ga0207652_101334931 524
141 3300026067 Ga0207678_10005540 Ga0207678_100055408 524
142 3300031911 Ga0307412_10003129 Ga0307412_100031299 524
143 3300046616 Ga0495668_0000093 Ga0495668_0000093_121666_123279 524
144 3300047472 Ga0495686_0001944 Ga0495686_0001944_15401_17014 524
145 3300048925 Ga0496122_0001855 Ga0496122_0001855_14566_16161 524
146 3300048926 Ga0496123_0000111 Ga0496123_0000111_66173_67768 524
147 3300048929 Ga0496126_0036574 Ga0496126_0036574_2625_4235 524
148 3300053087 Ga0500643_002010 Ga0500643_002010_2414_4009 524
149 3300003763 Ga0055529_1000095 Ga0055529_10000955 525
150 3300005327 Ga0070658_10008451 Ga0070658_100084512 525
151 3300005329 Ga0070683_100039119 Ga0070683_1000391193 525
152 3300005336 Ga0070680_100011326 Ga0070680_1000113262 525
153 3300005344 Ga0070661_100014189 Ga0070661_1000141894 525
154 3300005535 Ga0070684_100001781 Ga0070684_10000178111 525
155 3300005577 Ga0068857_100022162 Ga0068857_1000221625 525
156 3300005614 Ga0068856_100058963 Ga0068856_1000589633 525
157 3300009093 Ga0105240_10013471 Ga0105240_100134713 525
158 3300013102 Ga0157371_10016331 Ga0157371_100163313 525
159 3300013105 Ga0157369_10014632 Ga0157369_100146323 525
160 3300025272 Ga0209455_1000121 Ga0209455_1000121145 525
161 3300025904 Ga0207647_10001105 Ga0207647_1000110511 525
162 3300025909 Ga0207705_10030547 Ga0207705_100305471 525
163 3300025913 Ga0207695_10036377 Ga0207695_100363772 525
164 3300025944 Ga0207661_10159605 Ga0207661_101596052 525
165 3300025945 Ga0207679_10035228 Ga0207679_100352282 525
166 3300026116 Ga0207674_10003891 Ga0207674_100038917 525
167 3300026142 Ga0207698_10001764 Ga0207698_100017643 525
168 3300031731 Ga0307405_10087939 Ga0307405_100879392 525
169 3300031824 Ga0307413_10002695 Ga0307413_100026952 525
170 3300031824 Ga0307413_10094253 Ga0307413_100942531 525
171 3300032005 Ga0307411_10009325 Ga0307411_100093253 525
172 3300032005 Ga0307411_10077673 Ga0307411_100776731 525
173 3300037312 Ga0395899_0033793 Ga0395899_0033793_1505_3106 525
174 3300037312 Ga0395899_0038806 Ga0395899_0038806_298_1902 525
175 3300037312 Ga0395899_0045890 Ga0395899_0045890_896_2497 525
176 3300037418 Ga0395900_0001457 Ga0395900_0001457_21960_23561 525
177 3300037418 Ga0395900_0002121 Ga0395900_0002121_6967_8568 525
178 3300037418 Ga0395900_0003419 Ga0395900_0003419_6734_8338 525
179 3300037466 Ga0395898_0020283 Ga0395898_0020283_1992_3593 525
180 3300037471 Ga0395905_0000264 Ga0395905_0000264_21666_23270 525
181 3300037471 Ga0395905_0084516 Ga0395905_0084516_486_2087 525
182 3300038443 Ga0395901_0000188 Ga0395901_0000188_58952_60553 525
183 3300038443 Ga0395901_0001944 Ga0395901_0001944_9658_11262 525
184 3300038443 Ga0395901_0005266 Ga0395901_0005266_8303_9904 525
185 3300038443 Ga0395901_0056210 Ga0395901_0056210_2005_3606 525
186 3300044706 Ga0466964_0009601 Ga0466964_0009601_767_2368 525
187 3300044735 Ga0466968_0010291 Ga0466968_0010291_1630_3231 525
188 3300045049 Ga0466959_0004576 Ga0466959_0004576_1510_3111 525
189 3300045976 Ga0466967_0056006 Ga0466967_0056006_1276_2877 525
190 3300005329 Ga0070683_100004808 Ga0070683_1000048082 526
191 3300005339 Ga0070660_100002330 Ga0070660_1000023307 526
192 3300005344 Ga0070661_100028307 Ga0070661_1000283072 526
193 3300005366 Ga0070659_100022574 Ga0070659_1000225743 526
194 3300005455 Ga0070663_100005267 Ga0070663_1000052673 526
195 3300005458 Ga0070681_10012286 Ga0070681_100122865 526
196 3300005535 Ga0070684_100026673 Ga0070684_1000266733 526
197 3300005563 Ga0068855_100007245 Ga0068855_1000072459 526
198 3300005614 Ga0068856_100011979 Ga0068856_1000119797 526
199 3300005616 Ga0068852_100045850 Ga0068852_1000458502 526
200 3300005834 Ga0068851_10021119 Ga0068851_100211193 526
201 3300013104 Ga0157370_10005621 Ga0157370_100056215 526
202 3300013105 Ga0157369_10039412 Ga0157369_100394122 526
203 3300025919 Ga0207657_10002038 Ga0207657_100020386 526
204 3300025919 Ga0207657_10058816 Ga0207657_100588162 526
205 3300025920 Ga0207649_10041844 Ga0207649_100418442 526
206 3300025921 Ga0207652_10010347 Ga0207652_100103472 526
207 3300025944 Ga0207661_10073427 Ga0207661_100734272 526
208 3300025949 Ga0207667_10021018 Ga0207667_100210187 526
209 3300026067 Ga0207678_10001327 Ga0207678_100013278 526
210 3300026067 Ga0207678_10019409 Ga0207678_100194091 526
211 3300026078 Ga0207702_10074577 Ga0207702_100745772 526
212 3300031824 Ga0307413_10003770 Ga0307413_100037703 526
213 3300032004 Ga0307414_10025695 Ga0307414_100256953 526
214 3300032005 Ga0307411_10004560 Ga0307411_100045605 526
215 3300037312 Ga0395899_0004902 Ga0395899_0004902_152_1759 526
216 3300037312 Ga0395899_0022439 Ga0395899_0022439_388_1986 526
217 3300037418 Ga0395900_0000693 Ga0395900_0000693_28128_29735 526
218 3300037418 Ga0395900_0063847 Ga0395900_0063847_764_2362 526
219 3300037466 Ga0395898_0002010 Ga0395898_0002010_8968_10575 526
220 3300037471 Ga0395905_0012199 Ga0395905_0012199_1318_2919 526
221 3300038443 Ga0395901_0000507 Ga0395901_0000507_15190_16797 526
222 3300038443 Ga0395901_0049516 Ga0395901_0049516_2020_3618 526
223 3300038443 Ga0395901_0058143 Ga0395901_0058143_1953_3551 526
224 3300048924 Ga0496121_0000017 Ga0496121_0000017_253303_254952 526
225 3300001990 JGI24737J22298_10000658 JGI24737J22298_1000065810 527
226 3300005327 Ga0070658_10017540 Ga0070658_100175406 527
227 3300005338 Ga0068868_100112267 Ga0068868_1001122672 527
228 3300005339 Ga0070660_100000699 Ga0070660_1000006999 527
229 3300005339 Ga0070660_100002604 Ga0070660_10000260411 527
230 3300005366 Ga0070659_100010242 Ga0070659_1000102423 527
231 3300005366 Ga0070659_100042650 Ga0070659_1000426503 527
232 3300005366 Ga0070659_100084272 Ga0070659_1000842722 527
233 3300005539 Ga0068853_100156734 Ga0068853_1001567342 527
234 3300005564 Ga0070664_100037158 Ga0070664_1000371583 527
235 3300005843 Ga0068860_100002208 Ga0068860_10000220811 527
236 3300005844 Ga0068862_100055324 Ga0068862_1000553242 527
237 3300006237 Ga0097621_100156669 Ga0097621_1001566692 527
238 3300013100 Ga0157373_10047138 Ga0157373_100471381 527
239 3300025904 Ga0207647_10035847 Ga0207647_100358473 527
240 3300025909 Ga0207705_10004864 Ga0207705_100048648 527
241 3300025919 Ga0207657_10004236 Ga0207657_1000423611 527
242 3300025920 Ga0207649_10057892 Ga0207649_100578922 527
243 3300025923 Ga0207681_10017942 Ga0207681_100179424 527
244 3300025932 Ga0207690_10035869 Ga0207690_100358694 527
245 3300025932 Ga0207690_10058518 Ga0207690_100585182 527
246 3300025938 Ga0207704_10069742 Ga0207704_100697421 527
247 3300025945 Ga0207679_10080071 Ga0207679_100800713 527
248 3300025960 Ga0207651_10048248 Ga0207651_100482483 527
249 3300026041 Ga0207639_10049182 Ga0207639_100491823 527
250 3300026067 Ga0207678_10030867 Ga0207678_100308674 527
251 3300028380 Ga0268265_10039955 Ga0268265_100399551 527
252 3300028380 Ga0268265_10042964 Ga0268265_100429643 527
253 3300028381 Ga0268264_10020676 Ga0268264_100206765 527
254 3300032005 Ga0307411_10004407 Ga0307411_100044073 527

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04389

Peptidase_M28

Peptidase family M28

312

530

0.85

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

327

532

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4n4p-assembly1.cif.gz_C crystal structure of n-acetylneuraminate lyase from mycoplasma synoviae, crystal form i 0.8096 196 218
6esl-assembly1.cif.gz_A crystal structure of the legionella pneumoppila lapa 0.7804 280 506
7ebf-assembly1.cif.gz_A cryo-em structure of isocitrate lyase-1 from candida albicans 0.7791 196 223
6esl-assembly1.cif.gz_B crystal structure of the legionella pneumoppila lapa 0.7772 280 506
1oy0-assembly1.cif.gz_A the crystal structure of the first enzyme of pantothenate biosynthetic pathway, ketopantoate hydroxymethyltransferase from mycobacterium tuberculosis shows a decameric assembly and terminal helix-swapping 0.7771 194 217
ID Description Score Start End Superfamily
3iibA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8555 22 514 3.40.630.10
3iibA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8387 22 514 3.40.630.10
af_Q55DP8_2_191_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8133 280 349 3.40.630.10
af_Q54MN6_157_296_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.795 94 270 3.40.630.10
af_Q2FWN8_3_180_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7902 281 361 3.40.630.10
ID Description Score Start End GO Terms
AF-W0AER0-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9755 16 504 GO:0004180
GO:0005576
GO:0005764
GO:0070573
AF-A0A3M1A610-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9629 23 517 GO:0004180
GO:0005576
GO:0005764
GO:0070573
AF-A0A1M3DA02-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9625 16 525 GO:0004180
GO:0005576
GO:0005764
GO:0070573
AF-A0A5J4PG69-F1-model_v4 Aminopeptidase S (EC 3.4.11.24) 0.9623 390 514 GO:0004177
AF-A0A7X4FUV2-F1-model_v4 Carboxypeptidase Q (Plasma glutamate carboxypeptidase) 0.9557 282 517 GO:0004180
GO:0005576
GO:0005764
GO:0070573

Feature Viewer

pLDDT pTM Quality
89.53 0.89 High
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Predicted Structure (AlphaFold2)

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