F364794

General Info

Members Datasets Scaffolds Average Seq Length
254 193 226 633

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100012928|Ga0075429_1000129288
Length 685
Sequence MTAVTGPTGTNTGVDTNSSSNPSGTTMQRPGLAPVQTTPVDASVAEPPPAPGNGGQVSEREARQVAEAARQTEWTKPSFAKELFLGRFRLDLIHPHPRPDHATVAAGEAYLRELEKFVTDEVDGARIEREDRIPDETIQGLKKLGVFGIKIPKEYGGLGLSQVYYNKALTTLGSGHPSLTALISAHQSIGVPQPLKLFGTEDQRRRYLPRLATTDISAFLLTEPDVGSDPARLATSAVPTEDGSGYLLNGVKLWATNGAIADIVVVMARVPRSAGHRGGISAFIVESDWPGVTVERRNQFMGLRGLENSVTRFHDVVVPKDNLIGAEGQGLKIALTTLNTGRLSLPAVCSAASKWCVKIAREWSQARVQWGRPVGKHEAIAKKIAFMAATSYAMEAVLELSSQLADDESADIRIEAALAKLYTSEMASLIADELLQIRGGRGYETAASLRARGERAVPVEQLVRDLRINRIFEGSTEIMHLFIAREAVDQHLSVAGALIDEQAGAFYAGWLPRLAVGKGRVPGSYREFGPLARHLRYIERSSRKLARSTFYGMARWQGRMEVKQAFLARVVNIGAELFAMSAVCVRADMQRSDDPDLGASAYELADAFCRQAGLRIEGLFTGLWTNSDGSDYRLARQVLDGRYRWQEAGVIDPSEDDLPWIAEVRPGPATGPNLRRRTNPESSAG

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2527291627 Frankia casuarinae Thr Isolate Nodule
3 2527291629 Frankia sp. BMG5.23 Isolate Nodule
4 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
5 2576861822 Frankia sp. CeD Isolate Nodule
6 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
7 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
8 2684623036 Frankia sp. CgIM4 Isolate Nodule
9 2710264753 Frankia sp. KB5 Isolate Nodule
10 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
11 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
12 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
13 2773857924 Frankia sp. CgIS1 Isolate Nodule
14 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
15 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
16 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
17 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
18 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
19 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
20 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
21 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
22 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
23 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
24 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
25 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
33 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
34 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
35 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
36 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
37 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
38 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
92 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
93 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
110 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
114 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
115 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
121 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
122 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
133 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
137 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
164 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
175 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
185 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
186 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
187 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 637000116 Frankia casuarinae CcI3 Isolate Nodule
191 8002775197 Frankia nepalensis CN7 Isolate Nodule
192 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
193 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.68
Metatranscriptomes 6.3
Isolates 11.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.57
Nodule 3.15
Rhizoplane 2.76
Rhizosphere 87.01
Stem 0
Stem Tuber 0
Unclassified 5.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1121123 3300003578 Bacteria 2160
2 Ga0070658_10001668 3300005327 Bacteria 18728
3 Ga0068869_100009642 3300005334 Bacteria 6270
4 Ga0070680_100000546 3300005336 Bacteria 25723
5 Ga0068868_100036220 3300005338 Bacteria 3818
6 Ga0070673_100004947 3300005364 Bacteria 8490
7 Ga0070659_100000066 3300005366 Bacteria 82349
8 Ga0070703_10003483 3300005406 Bacteria 4484
9 Ga0070709_10017258 3300005434 Bacteria 4137
10 Ga0070714_100004768 3300005435 Bacteria 10275
11 Ga0070714_100053832 3300005435 Bacteria 3437
12 Ga0070711_100000308 3300005439 Bacteria 25288
13 Ga0070705_100007416 3300005440 Bacteria 5393
14 Ga0070700_100015900 3300005441 Bacteria 4276
15 Ga0070708_100003634 3300005445 Bacteria 12095
16 Ga0070681_10000023 3300005458 Bacteria 112399
17 Ga0070681_10000459 3300005458 Bacteria 33341
18 Ga0070698_100006868 3300005471 Bacteria 12328
19 Ga0070679_100000004 3300005530 Bacteria 263662
20 Ga0070679_100001904 3300005530 Bacteria 18740
21 Ga0070696_100022818 3300005546 Bacteria 4254
22 Ga0068859_100005204 3300005617 Bacteria 13216
23 Ga0068858_100000010 3300005842 Bacteria 234748
24 Ga0081455_10000090 3300005937 Bacteria 97813
25 Ga0081455_10000939 3300005937 Bacteria 37256
26 Ga0081540_1001726 3300005983 Bacteria 18454
27 Ga0081539_10000509 3300005985 Bacteria 80756
28 Ga0081539_10006316 3300005985 Bacteria 11445
29 Ga0075428_100004204 3300006844 Bacteria 15860
30 Ga0075428_100006744 3300006844 Bacteria 12770
31 Ga0075428_100052247 3300006844 Bacteria 4480
32 Ga0075428_100067845 3300006844 Bacteria 3903
33 Ga0075431_100134454 3300006847 Bacteria 2549
34 Ga0075433_10023076 3300006852 Bacteria 5233
35 Ga0075434_100031801 3300006871 Bacteria 5203
36 Ga0075429_100012928 3300006880 Bacteria 7240
37 Ga0097620_100005204 3300006931 Bacteria 13216
38 Ga0075435_100072564 3300007076 Bacteria 2812
39 Ga0111539_10003823 3300009094 Bacteria 19821
40 Ga0111539_10020966 3300009094 Bacteria 8047
41 Ga0111539_10023034 3300009094 Bacteria 7649
42 Ga0105245_10033291 3300009098 Bacteria 4566
43 Ga0114129_10000031 3300009147 Bacteria 111827
44 Ga0114129_10009274 3300009147 Bacteria 14031
45 Ga0114129_10031581 3300009147 Bacteria 7485
46 Ga0114129_10328888 3300009147 Bacteria 2030
47 Ga0105243_10001305 3300009148 Bacteria 22267
48 Ga0157369_10000322 3300013105 Bacteria 64249
49 Ga0163163_10166556 3300014325 Bacteria 2250
50 Ga0157379_10002476 3300014968 Bacteria 15459
51 Ga0197907_10988765 3300020069 Bacteria 5029
52 Ga0197907_11115341 3300020069 Bacteria 2456
53 Ga0206356_10215075 3300020070 Bacteria 3468
54 Ga0206349_1492174 3300020075 Bacteria 2308
55 Ga0206351_10815575 3300020077 Bacteria 2883
56 Ga0206352_10968942 3300020078 Bacteria 2595
57 Ga0206350_10446000 3300020080 Bacteria 2716
58 Ga0206354_11550388 3300020081 Bacteria 7117
59 Ga0206353_10067470 3300020082 Bacteria 21907
60 Ga0206353_11824137 3300020082 Bacteria 3954
61 Ga0154015_1263368 3300020610 Bacteria 2084
62 Ga0213876_10001241 3300021384 Bacteria 16095
63 Ga0224712_10009709 3300022467 Bacteria 2913
64 Ga0224712_10011458 3300022467 Bacteria 2753
65 Ga0207710_10000048 3300025900 Bacteria 189597
66 Ga0207705_10001031 3300025909 Bacteria 22641
67 Ga0207707_10000029 3300025912 Bacteria 162223
68 Ga0207707_10001077 3300025912 Bacteria 26132
69 Ga0207693_10049078 3300025915 Bacteria 3314
70 Ga0207663_10000182 3300025916 Bacteria 28003
71 Ga0207660_10000689 3300025917 Bacteria 22591
72 Ga0207660_10004914 3300025917 Bacteria 8707
73 Ga0207652_10000049 3300025921 Bacteria 123521
74 Ga0207652_10000130 3300025921 Bacteria 81049
75 Ga0207646_10055445 3300025922 Bacteria 3543
76 Ga0207664_10001650 3300025929 Bacteria 14692
77 Ga0207690_10070242 3300025932 Bacteria 2412
78 Ga0207665_10025192 3300025939 Bacteria 3924
79 Ga0207651_10003022 3300025960 Bacteria 8152
80 Ga0207703_10000002 3300026035 Bacteria 600711
81 Ga0207708_10003950 3300026075 Bacteria 10917
82 Ga0207708_10007239 3300026075 Bacteria 8202
83 Ga0207698_10080413 3300026142 Bacteria 2625
84 Ga0207428_10013128 3300027907 Bacteria 7252
85 Ga0265338_10031641 3300028800 Bacteria 5182
86 Ga0265338_10068149 3300028800 Bacteria 3068
87 Ga0265325_10002035 3300031241 Bacteria 13901
88 Ga0265340_10000376 3300031247 Bacteria 23718
89 Ga0265339_10003571 3300031249 Bacteria 10873
90 Ga0265313_10008603 3300031595 Bacteria 6752
91 Ga0265314_10005626 3300031711 Bacteria 11255
92 Ga0265342_10015578 3300031712 Bacteria 4997
93 Ga0316576_10000437 3300031727 Bacteria 19400
94 Ga0316577_10001712 3300031733 Bacteria 10535
95 Ga0307406_10043666 3300031901 Bacteria 2804
96 Ga0307416_100132524 3300032002 Bacteria 2247
97 Ga0307416_100135820 3300032002 Bacteria 2224
98 Ga0307411_10051657 3300032005 Bacteria 2683
99 Ga0307415_100000631 3300032126 Bacteria 15450
100 Ga0316592_1004400 3300033524 Bacteria 2616
101 Ga0316588_1009723 3300033528 Bacteria 2011
102 Ga0316584_0002398 3300036712 Bacteria 11843
103 Ga0395900_0124655 3300037418 Bacteria 2642
104 Ga0436364_0031986 3300037853 Bacteria 2978
105 Ga0436364_0489157 3300037853 Bacteria 2546
106 Ga0395901_0007102 3300038443 Bacteria 11318
107 Ga0436365_1100103 3300039437 Bacteria 58847
108 Ga0439449_0017683 3300042007 Bacteria 2677
109 Ga0466969_0003927 3300044656 Bacteria 7895
110 Ga0466969_0007562 3300044656 Bacteria 5774
111 Ga0466969_0027474 3300044656 Bacteria 2914
112 Ga0466966_0031211 3300044684 Bacteria 3456
113 Ga0466966_0036036 3300044684 Bacteria 3195
114 Ga0466966_0045319 3300044684 Bacteria 2812
115 Ga0466966_0047485 3300044684 Bacteria 2737
116 Ga0466966_0061833 3300044684 Bacteria 2361
117 Ga0466961_0008669 3300044693 Bacteria 6483
118 Ga0466961_0031612 3300044693 Bacteria 3403
119 Ga0466961_0036104 3300044693 Bacteria 3172
120 Ga0466961_0040671 3300044693 Bacteria 2980
121 Ga0466963_0007425 3300044694 Bacteria 6532
122 Ga0466963_0037010 3300044694 Bacteria 3185
123 Ga0466963_0077204 3300044694 Bacteria 2250
124 Ga0466964_0016351 3300044706 Bacteria 2832
125 Ga0466971_0024468 3300044719 Bacteria 2694
126 Ga0466970_0015128 3300044765 Bacteria 3968
127 Ga0466957_0003178 3300044842 Bacteria 8967
128 Ga0466957_0020272 3300044842 Bacteria 3912
129 Ga0466957_0024102 3300044842 Bacteria 3601
130 Ga0466960_0002854 3300044901 Bacteria 6549
131 Ga0466959_0034369 3300045049 Bacteria 3749
132 Ga0466959_0070193 3300045049 Bacteria 2538
133 Ga0466958_0007951 3300045836 Bacteria 5860
134 Ga0466958_0008467 3300045836 Bacteria 5709
135 Ga0466958_0058255 3300045836 Bacteria 2349
136 Ga0466967_0009475 3300045976 Bacteria 7227
137 Ga0495592_0015699 3300046454 Bacteria 5746
138 Ga0495651_0003284 3300046462 Bacteria 12413
139 Ga0495580_0032141 3300046472 Bacteria 3788
140 Ga0495662_0001200 3300046476 Bacteria 12793
141 Ga0495664_0007850 3300046477 Bacteria 5938
142 Ga0495608_0012059 3300046511 Bacteria 6007
143 Ga0495628_0031290 3300046516 Bacteria 4304
144 Ga0495630_0077862 3300046517 Bacteria 2499
145 Ga0495666_0023834 3300046526 Bacteria 3026
146 Ga0495665_0002581 3300046531 Bacteria 9784
147 Ga0495640_0003027 3300046533 Bacteria 13530
148 Ga0495586_0005124 3300046535 Bacteria 7014
149 Ga0495645_0005447 3300046543 Bacteria 8737
150 Ga0495667_0007975 3300046559 Bacteria 7182
151 Ga0495599_0012089 3300046678 Bacteria 5312
152 Ga0495646_0036253 3300046680 Bacteria 3055
153 Ga0495613_0003372 3300046689 Bacteria 11937
154 Ga0495581_0003111 3300047315 Bacteria 9502
155 Ga0495604_0007102 3300047317 Bacteria 8878
156 Ga0495674_0006907 3300047319 Bacteria 10858
157 Ga0495683_0001233 3300047323 Bacteria 17406
158 Ga0495675_0012511 3300047444 Bacteria 5341
159 Ga0495593_0009261 3300047673 Bacteria 5713
160 Ga0496106_0007131 3300048909 Bacteria 8256
161 Ga0496106_0154429 3300048909 Bacteria 1812
162 Ga0496109_0001274 3300048912 Bacteria 20900
163 Ga0496109_0004186 3300048912 Bacteria 12037
164 Ga0496110_0064759 3300048913 Bacteria 3231
165 Ga0496113_0024170 3300048916 Bacteria 4315
166 Ga0501031_0016056 3300049568 Bacteria 4862
167 Ga0501032_0011670 3300049569 Bacteria 6299
168 Ga0501032_0017262 3300049569 Bacteria 5066
169 Ga0501033_0009205 3300049570 Bacteria 7605
170 Ga0501034_0043972 3300049571 Bacteria 4518
171 Ga0501036_0022177 3300049572 Bacteria 5341
172 Ga0501036_0070245 3300049572 Bacteria 2961
173 Ga0501037_0004807 3300049573 Bacteria 9820
174 Ga0501039_0007002 3300049575 Bacteria 8585
175 Ga0501040_0013787 3300049576 Bacteria 5320
176 Ga0501040_0046080 3300049576 Bacteria 2976
177 Ga0501041_0035290 3300049577 Bacteria 3030
178 Ga0501042_0029986 3300049578 Bacteria 3839
179 Ga0501042_0049722 3300049578 Bacteria 2991
180 Ga0501043_0025949 3300049579 Bacteria 4597
181 Ga0501043_0051737 3300049579 Bacteria 3227
182 Ga0501046_0005590 3300049580 Bacteria 11225
183 Ga0501047_0000139 3300049581 Bacteria 88281
184 Ga0501047_0074642 3300049581 Bacteria 3265
185 Ga0501047_0117368 3300049581 Bacteria 2542
186 Ga0501048_0005764 3300049582 Bacteria 9415
187 Ga0501068_0008974 3300049584 Bacteria 5579
188 Ga0501068_0025826 3300049584 Bacteria 3457
189 Ga0501069_0002472 3300049585 Bacteria 9431
190 Ga0501070_0009485 3300049586 Bacteria 8228
191 Ga0501070_0011957 3300049586 Bacteria 7330
192 Ga0501072_0020910 3300049588 Bacteria 5073
193 Ga0501072_0024973 3300049588 Bacteria 4653
194 Ga0501072_0060168 3300049588 Bacteria 2996
195 Ga0501073_0015596 3300049589 Bacteria 5512
196 Ga0501074_0000832 3300049590 Bacteria 19586
197 Ga0501076_0022641 3300049592 Bacteria 4831
198 Ga0501076_0028604 3300049592 Bacteria 4329
199 Ga0501076_0042248 3300049592 Bacteria 3588
200 Ga0501079_0002205 3300049741 Bacteria 14043
201 Ga0501079_0052597 3300049741 Bacteria 3143
202 Ga0501080_0008700 3300049742 Bacteria 9215
203 Ga0501080_0015655 3300049742 Bacteria 6992
204 Ga0501080_0058960 3300049742 Bacteria 3572
205 Ga0501035_0004716 3300049822 Bacteria 12948
206 Ga0501035_0037351 3300049822 Bacteria 4398
207 Ga0501044_0028671 3300049823 Bacteria 5873
208 Ga0501045_0020547 3300049824 Bacteria 4719
209 nmdc:mga03n38_8015_c1 3300050490 Bacteria 3768
210 nmdc:mga05p37_18665_c1 3300050507 Bacteria 8382
211 nmdc:mga05p37_57498_c1 3300050507 Bacteria 4791
212 nmdc:mga05p37_6553_c1 3300050507 Bacteria 13722
213 nmdc:mga09592_11_c1 3300050508 Bacteria 73718
214 nmdc:mga0qj67_46_c1 3300050509 Bacteria 72974
215 nmdc:mga06r32_5_c1 3300050510 Bacteria 79813
216 nmdc:mga08y16_12243_c1 3300050511 Bacteria 9014
217 nmdc:mga08y16_53249_c1 3300050511 Bacteria 4232
218 nmdc:mga0n895_85059_c1 3300050512 Bacteria 3157
219 nmdc:mga0a205_58395_c1 3300050515 Bacteria 3727
220 Ga0495601_0003135 3300053077 Bacteria 9458
221 Ga0495619_0012394 3300053085 Bacteria 5368
222 Ga0500556_0000934 3300053104 Bacteria 15796
223 Ga0500616_0017314 3300053153 Bacteria 4089
224 Ga0500645_007666 3300053730 Bacteria 3739
225 Ga0501084_0021036 3300054114 Bacteria 5442
226 Ga0501082_0038710 3300060353 Bacteria 4112

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042007 Ga0439449_0017683 Ga0439449_0017683_21_1667 538
2 3300048909 Ga0496106_0154429 Ga0496106_0154429_13_1710 560
3 3300050512 nmdc:mga0n895_85059_c1 nmdc:mga0n895_85059_c1_1028_2902 596
4 3300032126 Ga0307415_100000631 Ga0307415_10000063118 598
5 3300044694 Ga0466963_0077204 Ga0466963_0077204_261_2162 598
6 3300007076 Ga0075435_100072564 Ga0075435_1000725642 603
7 3300009147 Ga0114129_10031581 Ga0114129_100315813 603
8 3300025922 Ga0207646_10055445 Ga0207646_100554453 603
9 3300050507 nmdc:mga05p37_57498_c1 nmdc:mga05p37_57498_c1_2508_4382 603
10 3300044842 Ga0466957_0024102 Ga0466957_0024102_207_2132 604
11 3300053153 Ga0500616_0017314 Ga0500616_0017314_1529_3403 604
12 3300049568 Ga0501031_0016056 Ga0501031_0016056_158_2029 605
13 3300049569 Ga0501032_0017262 Ga0501032_0017262_2972_4843 605
14 3300049570 Ga0501033_0009205 Ga0501033_0009205_2500_4371 605
15 3300049572 Ga0501036_0022177 Ga0501036_0022177_3291_5162 605
16 3300049573 Ga0501037_0004807 Ga0501037_0004807_6321_8192 605
17 3300049575 Ga0501039_0007002 Ga0501039_0007002_3498_5369 605
18 3300049578 Ga0501042_0029986 Ga0501042_0029986_970_2841 605
19 3300049579 Ga0501043_0051737 Ga0501043_0051737_351_2222 605
20 3300049580 Ga0501046_0005590 Ga0501046_0005590_7588_9459 605
21 3300049581 Ga0501047_0117368 Ga0501047_0117368_22_1893 605
22 3300049582 Ga0501048_0005764 Ga0501048_0005764_3756_5627 605
23 3300049584 Ga0501068_0008974 Ga0501068_0008974_924_2795 605
24 3300049585 Ga0501069_0002472 Ga0501069_0002472_4384_6258 605
25 3300049586 Ga0501070_0011957 Ga0501070_0011957_5109_6980 605
26 3300049588 Ga0501072_0024973 Ga0501072_0024973_99_1970 605
27 3300049589 Ga0501073_0015596 Ga0501073_0015596_1203_3074 605
28 3300049742 Ga0501080_0015655 Ga0501080_0015655_1254_3125 605
29 3300049822 Ga0501035_0004716 Ga0501035_0004716_7647_9518 605
30 3300049823 Ga0501044_0028671 Ga0501044_0028671_3058_4929 605
31 3300053104 Ga0500556_0000934 Ga0500556_0000934_1753_3627 605
32 3300054114 Ga0501084_0021036 Ga0501084_0021036_1361_3232 605
33 3300060353 Ga0501082_0038710 Ga0501082_0038710_1969_3840 605
34 3300009147 Ga0114129_10009274 Ga0114129_100092745 606
35 3300049572 Ga0501036_0070245 Ga0501036_0070245_386_2272 606
36 3300049576 Ga0501040_0013787 Ga0501040_0013787_709_2595 606
37 3300049577 Ga0501041_0035290 Ga0501041_0035290_397_2283 606
38 3300049578 Ga0501042_0049722 Ga0501042_0049722_427_2313 606
39 3300049588 Ga0501072_0060168 Ga0501072_0060168_186_2072 606
40 3300050507 nmdc:mga05p37_6553_c1 nmdc:mga05p37_6553_c1_11314_13203 606
41 3300048912 Ga0496109_0001274 Ga0496109_0001274_8130_10019 608
42 3300005937 Ga0081455_10000090 Ga0081455_1000009024 612
43 3300005434 Ga0070709_10017258 Ga0070709_100172582 613
44 3300005439 Ga0070711_100000308 Ga0070711_10000030819 613
45 3300025916 Ga0207663_10000182 Ga0207663_1000018213 613
46 3300050490 nmdc:mga03n38_8015_c1 nmdc:mga03n38_8015_c1_885_2741 613
47 3300050511 nmdc:mga08y16_12243_c1 nmdc:mga08y16_12243_c1_4058_5953 613
48 3300005364 Ga0070673_100004947 Ga0070673_1000049473 617
49 3300005406 Ga0070703_10003483 Ga0070703_100034834 617
50 3300005445 Ga0070708_100003634 Ga0070708_1000036348 617
51 3300005617 Ga0068859_100005204 Ga0068859_1000052045 617
52 3300006844 Ga0075428_100004204 Ga0075428_1000042048 617
53 3300006852 Ga0075433_10023076 Ga0075433_100230763 617
54 3300006871 Ga0075434_100031801 Ga0075434_1000318013 617
55 3300006931 Ga0097620_100005204 Ga0097620_1000052048 617
56 3300009094 Ga0111539_10020966 Ga0111539_100209665 617
57 3300020069 Ga0197907_10988765 Ga0197907_109887653 617
58 3300025960 Ga0207651_10003022 Ga0207651_100030227 617
59 3300050515 nmdc:mga0a205_58395_c1 nmdc:mga0a205_58395_c1_686_2599 617
60 3300005458 Ga0070681_10000023 Ga0070681_1000002344 618
61 3300005530 Ga0070679_100000004 Ga0070679_100000004234 618
62 3300020077 Ga0206351_10815575 Ga0206351_108155752 618
63 3300020610 Ga0154015_1263368 Ga0154015_12633682 618
64 3300025912 Ga0207707_10000029 Ga0207707_10000029125 618
65 3300025917 Ga0207660_10004914 Ga0207660_100049145 618
66 3300025921 Ga0207652_10000049 Ga0207652_1000004944 618
67 3300005366 Ga0070659_100000066 Ga0070659_10000006611 619
68 3300013105 Ga0157369_10000322 Ga0157369_1000032233 619
69 3300025932 Ga0207690_10070242 Ga0207690_100702421 619
70 3300031733 Ga0316577_10001712 Ga0316577_100017126 619
71 3300036712 Ga0316584_0002398 Ga0316584_0002398_6017_7900 619
72 3300044694 Ga0466963_0037010 Ga0466963_0037010_913_2784 619
73 3300044706 Ga0466964_0016351 Ga0466964_0016351_655_2526 619
74 3300044842 Ga0466957_0003178 Ga0466957_0003178_6213_8084 619
75 3300045836 Ga0466958_0007951 Ga0466958_0007951_537_2408 619
76 3300049581 Ga0501047_0000139 Ga0501047_0000139_73037_74908 619
77 3300049592 Ga0501076_0042248 Ga0501076_0042248_13_1899 619
78 3300006844 Ga0075428_100067845 Ga0075428_1000678452 620
79 3300022467 Ga0224712_10009709 Ga0224712_100097091 620
80 3300005985 Ga0081539_10006316 Ga0081539_100063162 621
81 3300009094 Ga0111539_10023034 Ga0111539_100230346 621
82 3300028800 Ga0265338_10031641 Ga0265338_100316415 621
83 3300028800 Ga0265338_10068149 Ga0265338_100681491 621
84 3300031241 Ga0265325_10002035 Ga0265325_100020358 621
85 3300031247 Ga0265340_10000376 Ga0265340_100003766 621
86 3300031249 Ga0265339_10003571 Ga0265339_100035718 621
87 3300031595 Ga0265313_10008603 Ga0265313_100086034 621
88 3300031711 Ga0265314_10005626 Ga0265314_100056261 621
89 3300031712 Ga0265342_10015578 Ga0265342_100155782 621
90 3300006847 Ga0075431_100134454 Ga0075431_1001344542 622
91 3300049586 Ga0501070_0009485 Ga0501070_0009485_4263_6143 622
92 3300049590 Ga0501074_0000832 Ga0501074_0000832_2759_4639 622
93 3300049741 Ga0501079_0002205 Ga0501079_0002205_8561_10441 622
94 3300049742 Ga0501080_0008700 Ga0501080_0008700_3500_5380 622
95 3300049742 Ga0501080_0058960 Ga0501080_0058960_1153_3033 622
96 3300050511 nmdc:mga08y16_53249_c1 nmdc:mga08y16_53249_c1_209_2092 622
97 3300005327 Ga0070658_10001668 Ga0070658_1000166814 623
98 3300005336 Ga0070680_100000546 Ga0070680_1000005469 623
99 3300005441 Ga0070700_100015900 Ga0070700_1000159003 623
100 3300005458 Ga0070681_10000459 Ga0070681_100004597 623
101 3300005530 Ga0070679_100001904 Ga0070679_1000019046 623
102 3300006844 Ga0075428_100052247 Ga0075428_1000522473 623
103 3300009094 Ga0111539_10003823 Ga0111539_100038235 623
104 3300014325 Ga0163163_10166556 Ga0163163_101665561 623
105 3300020069 Ga0197907_11115341 Ga0197907_111153411 623
106 3300020070 Ga0206356_10215075 Ga0206356_102150753 623
107 3300020075 Ga0206349_1492174 Ga0206349_14921742 623
108 3300020078 Ga0206352_10968942 Ga0206352_109689422 623
109 3300020080 Ga0206350_10446000 Ga0206350_104460002 623
110 3300020081 Ga0206354_11550388 Ga0206354_115503884 623
111 3300020082 Ga0206353_10067470 Ga0206353_1006747019 623
112 3300021384 Ga0213876_10001241 Ga0213876_1000124113 623
113 3300022467 Ga0224712_10011458 Ga0224712_100114583 623
114 3300025909 Ga0207705_10001031 Ga0207705_100010316 623
115 3300025912 Ga0207707_10001077 Ga0207707_1000107710 623
116 3300025917 Ga0207660_10000689 Ga0207660_100006896 623
117 3300025921 Ga0207652_10000130 Ga0207652_1000013066 623
118 3300026075 Ga0207708_10007239 Ga0207708_100072394 623
119 3300027907 Ga0207428_10013128 Ga0207428_100131282 623
120 3300037853 Ga0436364_0489157 Ga0436364_0489157_347_2248 623
121 3300039437 Ga0436365_1100103 Ga0436365_1100103_25286_27169 623
122 3300048912 Ga0496109_0004186 Ga0496109_0004186_9058_10950 623
123 3300048916 Ga0496113_0024170 Ga0496113_0024170_366_2258 623
124 3300053730 Ga0500645_007666 Ga0500645_007666_648_2549 623
125 iso_pu_bacteria 2527291627 2528205173 623
126 iso_pu_bacteria 2527291629 2528212270 623
127 iso_pu_bacteria 2546825537 2546948928 623
128 iso_pu_bacteria 2576861822 2579749060 623
129 iso_pu_bacteria 2684623035 2686539013 623
130 iso_pu_bacteria 2684623036 2686541131 623
131 iso_pu_bacteria 2710264753 2710602803 623
132 iso_pu_bacteria 2773857924 2774864928 623
133 iso_pu_bacteria 637000116 637880362 623
134 iso_pu_bacteria 8002775197 8002778466 623
135 3300005440 Ga0070705_100007416 Ga0070705_1000074163 624
136 3300005546 Ga0070696_100022818 Ga0070696_1000228183 624
137 3300009147 Ga0114129_10328888 Ga0114129_103288881 624
138 3300047323 Ga0495683_0001233 Ga0495683_0001233_8588_10543 624
139 3300049569 Ga0501032_0011670 Ga0501032_0011670_3386_5308 624
140 3300049579 Ga0501043_0025949 Ga0501043_0025949_120_2042 624
141 iso_pu_bacteria 2895880812 2895885561 624
142 3300005471 Ga0070698_100006868 Ga0070698_1000068688 625
143 3300020082 Ga0206353_11824137 Ga0206353_118241375 625
144 3300025939 Ga0207665_10025192 Ga0207665_100251922 625
145 3300032005 Ga0307411_10051657 Ga0307411_100516571 625
146 3300044656 Ga0466969_0027474 Ga0466969_0027474_819_2765 625
147 3300044684 Ga0466966_0036036 Ga0466966_0036036_43_1989 625
148 3300044684 Ga0466966_0061833 Ga0466966_0061833_452_2350 625
149 3300049581 Ga0501047_0074642 Ga0501047_0074642_372_2306 625
150 3300049822 Ga0501035_0037351 Ga0501035_0037351_149_2071 625
151 3300005435 Ga0070714_100004768 Ga0070714_1000047687 626
152 3300005937 Ga0081455_10000939 Ga0081455_100009397 626
153 3300025929 Ga0207664_10001650 Ga0207664_1000165011 626
154 3300049741 Ga0501079_0052597 Ga0501079_0052597_587_2500 626
155 iso_pu_bacteria 2887443736 2887446859 627
156 3300005338 Ga0068868_100036220 Ga0068868_1000362202 628
157 3300009098 Ga0105245_10033291 Ga0105245_100332913 628
158 3300025915 Ga0207693_10049078 Ga0207693_100490782 628
159 3300026075 Ga0207708_10003950 Ga0207708_100039502 628
160 3300048913 Ga0496110_0064759 Ga0496110_0064759_145_2046 628
161 3300032002 Ga0307416_100132524 Ga0307416_1001325241 629
162 3300044694 Ga0466963_0007425 Ga0466963_0007425_1900_3846 629
163 3300045049 Ga0466959_0070193 Ga0466959_0070193_146_2065 629
164 3300045976 Ga0466967_0009475 Ga0466967_0009475_3324_5255 629
165 3300005842 Ga0068858_100000010 Ga0068858_10000001033 630
166 3300014968 Ga0157379_10002476 Ga0157379_100024764 630
167 3300025900 Ga0207710_10000048 Ga0207710_10000048127 630
168 3300026035 Ga0207703_10000002 Ga0207703_10000002232 630
169 3300031901 Ga0307406_10043666 Ga0307406_100436661 630
170 3300044765 Ga0466970_0015128 Ga0466970_0015128_1487_3424 630
171 iso_pu_bacteria 2866612099 2866615872 630
172 iso_pu_bacteria 2928142448 2928143885 630
173 3300006844 Ga0075428_100006744 Ga0075428_1000067441 631
174 3300009147 Ga0114129_10000031 Ga0114129_1000003139 631
175 3300050507 nmdc:mga05p37_18665_c1 nmdc:mga05p37_18665_c1_614_2539 631
176 3300050508 nmdc:mga09592_11_c1 nmdc:mga09592_11_c1_31506_33431 631
177 3300050509 nmdc:mga0qj67_46_c1 nmdc:mga0qj67_46_c1_12633_14558 631
178 3300050510 nmdc:mga06r32_5_c1 nmdc:mga06r32_5_c1_66774_68699 631
179 iso_pu_bacteria 2515154155 2515854554 631
180 iso_pu_bacteria 2675903058 2676473382 631
181 iso_pu_bacteria 2738543005 2739206114 631
182 iso_pu_bacteria 2738543011 2739239611 631
183 iso_pu_bacteria 2827628540 2827631892 631
184 iso_pu_bacteria 2889300758 2889304712 631
185 iso_pu_bacteria 2899359706 2899362602 631
186 iso_pu_bacteria 2939743619 2939744902 631
187 3300006880 Ga0075429_100012928 Ga0075429_1000129288 633
188 3300044684 Ga0466966_0045319 Ga0466966_0045319_786_2744 633
189 3300049571 Ga0501034_0043972 Ga0501034_0043972_115_2037 633
190 3300049592 Ga0501076_0028604 Ga0501076_0028604_1487_3445 633
191 iso_pu_bacteria 2744054611 2744956800 633
192 iso_pu_bacteria 2919713450 2919715013 633
193 3300026142 Ga0207698_10080413 Ga0207698_100804131 634
194 3300044693 Ga0466961_0040671 Ga0466961_0040671_300_2237 634
195 3300045836 Ga0466958_0058255 Ga0466958_0058255_69_2006 634
196 3300005435 Ga0070714_100053832 Ga0070714_1000538322 635
197 3300009148 Ga0105243_10001305 Ga0105243_100013055 635
198 3300037853 Ga0436364_0031986 Ga0436364_0031986_850_2787 635
199 3300044684 Ga0466966_0047485 Ga0466966_0047485_760_2697 635
200 3300044842 Ga0466957_0020272 Ga0466957_0020272_1790_3727 635
201 iso_pu_bacteria 2868088558 2868092097 635
202 3300037418 Ga0395900_0124655 Ga0395900_0124655_564_2564 636
203 3300038443 Ga0395901_0007102 Ga0395901_0007102_3884_5884 636
204 3300031727 Ga0316576_10000437 Ga0316576_100004379 637
205 3300033524 Ga0316592_1004400 Ga0316592_10044002 637
206 3300033528 Ga0316588_1009723 Ga0316588_10097231 637
207 3300044901 Ga0466960_0002854 Ga0466960_0002854_2708_4672 637
208 3300044656 Ga0466969_0007562 Ga0466969_0007562_362_2353 638
209 3300044693 Ga0466961_0036104 Ga0466961_0036104_298_2289 638
210 3300044719 Ga0466971_0024468 Ga0466971_0024468_347_2338 638
211 iso_pu_bacteria 2995463766 2995468314 638
212 iso_pu_bacteria 8033684223 8033687658 638
213 iso_pu_bacteria 8046352972 8046355362 639
214 3300005985 Ga0081539_10000509 Ga0081539_1000050918 641
215 3300045836 Ga0466958_0008467 Ga0466958_0008467_643_2610 641
216 3300005334 Ga0068869_100009642 Ga0068869_1000096424 642
217 3300044656 Ga0466969_0003927 Ga0466969_0003927_747_2708 642
218 3300044684 Ga0466966_0031211 Ga0466966_0031211_784_2745 642
219 3300044693 Ga0466961_0031612 Ga0466961_0031612_469_2430 642
220 3300045049 Ga0466959_0034369 Ga0466959_0034369_695_2656 642
221 3300046454 Ga0495592_0015699 Ga0495592_0015699_3438_5429 642
222 3300046462 Ga0495651_0003284 Ga0495651_0003284_2664_4655 642
223 3300046472 Ga0495580_0032141 Ga0495580_0032141_387_2378 642
224 3300046476 Ga0495662_0001200 Ga0495662_0001200_7089_9080 642
225 3300046477 Ga0495664_0007850 Ga0495664_0007850_3757_5748 642
226 3300046511 Ga0495608_0012059 Ga0495608_0012059_1916_3907 642
227 3300046516 Ga0495628_0031290 Ga0495628_0031290_657_2648 642
228 3300046517 Ga0495630_0077862 Ga0495630_0077862_191_2182 642
229 3300046526 Ga0495666_0023834 Ga0495666_0023834_593_2584 642
230 3300046531 Ga0495665_0002581 Ga0495665_0002581_7217_9208 642
231 3300046533 Ga0495640_0003027 Ga0495640_0003027_3223_5214 642
232 3300046535 Ga0495586_0005124 Ga0495586_0005124_2599_4590 642
233 3300046543 Ga0495645_0005447 Ga0495645_0005447_1129_3120 642
234 3300046559 Ga0495667_0007975 Ga0495667_0007975_3789_5780 642
235 3300046678 Ga0495599_0012089 Ga0495599_0012089_142_2133 642
236 3300046680 Ga0495646_0036253 Ga0495646_0036253_631_2622 642
237 3300046689 Ga0495613_0003372 Ga0495613_0003372_8536_10527 642
238 3300047315 Ga0495581_0003111 Ga0495581_0003111_4482_6473 642
239 3300047317 Ga0495604_0007102 Ga0495604_0007102_1330_3321 642
240 3300047319 Ga0495674_0006907 Ga0495674_0006907_8550_10541 642
241 3300047444 Ga0495675_0012511 Ga0495675_0012511_1948_3939 642
242 3300047673 Ga0495593_0009261 Ga0495593_0009261_1186_3177 642
243 3300053077 Ga0495601_0003135 Ga0495601_0003135_1915_3906 642
244 3300053085 Ga0495619_0012394 Ga0495619_0012394_1308_3299 642
245 3300032002 Ga0307416_100135820 Ga0307416_1001358201 643
246 3300049576 Ga0501040_0046080 Ga0501040_0046080_645_2594 643
247 3300049588 Ga0501072_0020910 Ga0501072_0020910_2820_4769 643
248 3300049592 Ga0501076_0022641 Ga0501076_0022641_566_2515 643
249 3300049824 Ga0501045_0020547 Ga0501045_0020547_552_2501 643
250 3300044693 Ga0466961_0008669 Ga0466961_0008669_4177_6153 644
251 3300048909 Ga0496106_0007131 Ga0496106_0007131_4795_6819 644
252 3300049584 Ga0501068_0025826 Ga0501068_0025826_959_2983 644
253 3300005983 Ga0081540_1001726 Ga0081540_10017263 645
254 3300003578 Ga0006562J51391_1121123 Ga0006562J51391_11211231 649

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

328

488

0.97

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

106

215

0.95

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

218

316

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lnx-assembly2.cif.gz_E crystal structure of mmgc, an acyl-coa dehydrogenase from bacillus subtilis. 0.936 68 445
4kto-assembly1.cif.gz_D crystal structure of a putative isovaleryl-coa dehydrogenase (psi-nysgrc-012251) from sinorhizobium meliloti 1021 0.9352 66 443
4kto-assembly1.cif.gz_C crystal structure of a putative isovaleryl-coa dehydrogenase (psi-nysgrc-012251) from sinorhizobium meliloti 1021 0.9348 66 448
3nf4-assembly1.cif.gz_A-2 crystal structure of acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to flavin adenine dinucleotide 0.934 57 443
7xp7-assembly2.cif.gz_C crystal structure of the flavoprotein colb1 catalyzing assembly line-tethered cysteine dehydrogenation 0.9337 66 441
ID Description Score Start End Superfamily
af_P96397_240_357_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9578 292 402 1.20.140.10
af_Q9VSL9_273_416_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9561 292 443 1.20.140.10
af_G5EEH6_270_413_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9557 292 443 1.20.140.10
3b96A01 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9548 285 450 1.20.140.10
af_Q8AW60_270_413_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9531 292 443 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A6B3FJ00-F1-model_v4 Acyl-CoA dehydrogenase 0.993 20 429 GO:0003995
GO:0050660
AF-A0A6B3FJ00-F1-model_v4 Acyl-CoA dehydrogenase 0.9905 20 429 GO:0003995
GO:0050660
AF-L8EGY0-F1-model_v4 Acyl-CoA dehydrogenase 0.9884 9 649 GO:0003995
GO:0050660
AF-L8EGY0-F1-model_v4 Acyl-CoA dehydrogenase 0.9853 9 649 GO:0003995
GO:0050660
AF-A0A101STG6-F1-model_v4 Acyl-CoA dehydrogenase 0.9789 1 649 GO:0003995
GO:0005737
GO:0033539
GO:0050660

Feature Viewer

pLDDT pTM Quality
91.41 0.91 High
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Predicted Structure (AlphaFold2)

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