F364714

General Info

Members Datasets Scaffolds Average Seq Length
254 213 236 512

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100006345|Ga0068853_1000063454
Length 549
Sequence LLVSFTPGKVLSMTWDELVASNAALSGEVRRSHEALKIAQLTIDKMKVELAYLRRMKYGRSSERLEQPQPQLELVGGQAAPVAGMPSAQVEPAGDEGQKSNVSSLEKERAKRQPKPRPGLREMPEHLPRRTVVHTPSGGCDCQACGAGLREIGQDVSEVLDYEPGTFHVVRHVRPKLACAGCHTITQALAPSRPVDRCLAGAGLLTHILVSKFADHTPLYRLCQIFGREDIELARSTITDWVGQAGWLLTPLAQAVGRYVLKAEKIHGDDTPIRSLGGKGKKAHTGRLWVYVRDDRPSGDKAPPAVWFQYSADRKGEHPVRHLKDFTGILQADAYAGYNALYEGGRIIEAGCWSHARRKVWDIHVKQHGLPGTLAHQALIRIGEVFKVEAEVNGRSALRRRRMRQTRTAPVLKELKDWMNQTLAQVSAKSPMALAIGYSLSNWTALTSFVNDGRIDAHNNTAERALRGVAIGRKNYLHVGSDAGGNTAAVIYTLLGTARLNGINPQRYLHYVLERIADHPSHRIDELLPWAVADKLTETTDAQVLPMAA

Samples

Sample ID Description Type Environment
1 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
2 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
3 2738543018 Massilia sp. GV045 Isolate Unclassified
4 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
5 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
6 2885266251 Ralstonia sp. SET104 Isolate Nodule
7 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
8 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
9 2928058823 Ralstonia sp. 1138 Isolate Unclassified
10 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
11 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
12 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
13 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
14 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
15 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
16 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
19 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
20 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
21 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
22 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
60 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
63 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
64 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
98 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
105 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
106 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
107 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
110 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
133 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
139 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
140 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
141 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
142 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
143 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
144 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
145 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
146 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
147 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
148 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
149 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
150 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
151 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
152 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
153 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
154 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
155 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
156 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
157 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
158 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
159 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
160 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
161 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
162 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
163 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
164 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
165 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
166 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
167 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
170 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
171 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
174 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
175 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
187 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
188 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
189 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
190 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
191 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
192 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
193 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
194 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
195 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
198 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
199 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
200 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
201 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
202 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
203 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
204 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
205 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
206 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
207 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
208 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
209 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
210 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
211 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
212 8019775933 Pseudomonas sp. PvR083 Isolate Rhizosphere
213 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.13
Metatranscriptomes 0.79
Isolates 7.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.3
Nodule 1.57
Rhizoplane 1.97
Rhizosphere 79.53
Stem 0
Stem Tuber 0
Unclassified 10.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1005042 3300001915 Bacteria 2825
2 JGI24746J21847_1002355 3300001977 Bacteria 3020
3 JGI24740J21852_10002727 3300001979 Bacteria 7899
4 JGI24744J21845_10002454 3300002077 Bacteria 3777
5 JGI24033J26618_1001304 3300002155 Bacteria 2455
6 rootH1_10023439 3300003316 Bacteria 3043
7 Ga0055538_1001954 3300003751 Bacteria 3373
8 Ga0055533_1000924 3300003756 Bacteria 8764
9 Ga0055542_1000627 3300003762 Bacteria 29709
10 Ga0055541_1000936 3300003841 Bacteria 6903
11 Ga0065714_10067076 3300005288 Bacteria 5915
12 Ga0070676_10047004 3300005328 Bacteria 2519
13 Ga0070670_100082107 3300005331 Bacteria 2770
14 Ga0070682_100015375 3300005337 Bacteria 4433
15 Ga0068868_100028188 3300005338 Bacteria 4291
16 Ga0070660_100003451 3300005339 Bacteria 10878
17 Ga0070661_100000020 3300005344 Bacteria 132014
18 Ga0070661_100007031 3300005344 Bacteria 7762
19 Ga0070668_100091890 3300005347 Bacteria 2393
20 Ga0070675_100023036 3300005354 Bacteria 4975
21 Ga0070663_100055957 3300005455 Bacteria 2825
22 Ga0068853_100006345 3300005539 Bacteria 9384
23 Ga0070686_100042537 3300005544 Bacteria 2846
24 Ga0068855_100081516 3300005563 Bacteria 3750
25 Ga0070664_100058046 3300005564 Bacteria 3291
26 Ga0070664_100079351 3300005564 Bacteria 2825
27 Ga0068854_100027418 3300005578 Bacteria 3926
28 Ga0068856_100000127 3300005614 Bacteria 76855
29 Ga0068856_100096611 3300005614 Bacteria 2943
30 Ga0070702_100021678 3300005615 Bacteria 3385
31 Ga0068852_100032081 3300005616 Bacteria 4345
32 Ga0068852_100076035 3300005616 Bacteria 2964
33 Ga0068861_100073177 3300005719 Bacteria 2661
34 Ga0070712_100110574 3300006175 Bacteria 2050
35 Ga0075370_10019050 3300006353 Bacteria 3730
36 Ga0068871_100070438 3300006358 Bacteria 2874
37 Ga0075428_100109809 3300006844 Bacteria 3005
38 Ga0075430_100098808 3300006846 Bacteria 2438
39 Ga0075436_100100762 3300006914 Bacteria 2011
40 Ga0075435_100078690 3300007076 Bacteria 2704
41 Ga0105240_10030891 3300009093 Bacteria 6958
42 Ga0105240_10104334 3300009093 Bacteria 3443
43 Ga0105240_10124918 3300009093 Bacteria 3094
44 Ga0105241_10045753 3300009174 Bacteria 3322
45 Ga0105237_10081647 3300009545 Bacteria 3224
46 Ga0105238_10081586 3300009551 Bacteria 3224
47 Ga0105239_10098945 3300010375 Bacteria 3224
48 Ga0157373_10000025 3300013100 Bacteria 146728
49 Ga0157371_10054973 3300013102 Bacteria 2825
50 Ga0157370_10000027 3300013104 Bacteria 146729
51 Ga0157372_10136489 3300013307 Bacteria 2825
52 Ga0163163_10075724 3300014325 Bacteria 3359
53 Ga0182007_10013631 3300015262 Bacteria 3092
54 Ga0182005_1000099 3300015265 Bacteria 65806
55 Ga0206351_10499978 3300020077 Bacteria 4735
56 Ga0154015_1022863 3300020610 Bacteria 22537
57 Ga0213873_10002864 3300021358 Plasmid 3041
58 Ga0213872_10016938 3300021361 Bacteria 3375
59 Ga0213872_10019547 3300021361 Bacteria 3118
60 Ga0213874_10007138 3300021377 Bacteria 2669
61 Ga0213874_10009120 3300021377 Bacteria 2442
62 Ga0213876_10021412 3300021384 Bacteria 3418
63 Ga0209784_101330 3300025224 Bacteria 3488
64 Ga0209566_101447 3300025225 Bacteria 6976
65 Ga0209674_103550 3300025226 Bacteria 2825
66 Ga0209677_101826 3300025253 Bacteria 8704
67 Ga0209148_1005657 3300025254 Bacteria 2825
68 Ga0207673_1000662 3300025290 Bacteria 3663
69 Ga0207697_10009077 3300025315 Bacteria 4309
70 Ga0207645_10065604 3300025907 Bacteria 2321
71 Ga0207654_10024433 3300025911 Bacteria 3249
72 Ga0207695_10021078 3300025913 Bacteria 7443
73 Ga0207695_10028067 3300025913 Bacteria 6251
74 Ga0207695_10108561 3300025913 Bacteria 2759
75 Ga0207671_10046129 3300025914 Bacteria 3224
76 Ga0207662_10027527 3300025918 Bacteria 3281
77 Ga0207657_10004467 3300025919 Bacteria 14797
78 Ga0207649_10000059 3300025920 Bacteria 99273
79 Ga0207649_10027994 3300025920 Bacteria 3314
80 Ga0207694_10003519 3300025924 Bacteria 12428
81 Ga0207650_10027353 3300025925 Bacteria 4082
82 Ga0207650_10071540 3300025925 Bacteria 2609
83 Ga0207659_10010859 3300025926 Bacteria 5735
84 Ga0207689_10052729 3300025942 Bacteria 3351
85 Ga0207679_10059952 3300025945 Bacteria 2825
86 Ga0207668_10077775 3300025972 Bacteria 2393
87 Ga0207640_10000175 3300025981 Bacteria 46495
88 Ga0207658_10120420 3300025986 Bacteria 2091
89 Ga0207677_10029315 3300026023 Bacteria 3495
90 Ga0207639_10047725 3300026041 Bacteria 3238
91 Ga0207678_10000009 3300026067 Bacteria 156690
92 Ga0207678_10036227 3300026067 Bacteria 4295
93 Ga0207678_10048038 3300026067 Bacteria 3690
94 Ga0207702_10000896 3300026078 Bacteria 30934
95 Ga0207702_10079481 3300026078 Bacteria 2843
96 Ga0207648_10080821 3300026089 Bacteria 2835
97 Ga0207675_100171589 3300026118 Bacteria 2073
98 Ga0207698_10009134 3300026142 Bacteria 6301
99 Ga0207698_10059583 3300026142 Bacteria 2965
100 Ga0265336_10000309 3300028666 Bacteria 33159
101 Ga0265336_10000324 3300028666 Bacteria 32252
102 Ga0307515_10087244 3300028794 Bacteria 3964
103 Ga0307515_10149102 3300028794 Bacteria 2456
104 Ga0265324_10000353 3300029957 Bacteria 33309
105 Ga0265328_10007082 3300031239 Bacteria 4698
106 Ga0265328_10025783 3300031239 Bacteria 2213
107 Ga0265327_10041082 3300031251 Bacteria 2496
108 Ga0265316_10041460 3300031344 Bacteria 3684
109 Ga0307513_10024878 3300031456 Bacteria 6956
110 Ga0307509_10069891 3300031507 Bacteria 3668
111 Ga0307509_10087988 3300031507 Bacteria 3189
112 Ga0307508_10058353 3300031616 Bacteria 3415
113 Ga0307508_10065028 3300031616 Bacteria 3214
114 Ga0307518_10011391 3300031838 Bacteria 6358
115 Ga0373944_0006239 3300035089 Bacteria 3161
116 Ga0373943_0017349 3300035170 Bacteria 3293
117 Ga0373946_0022339 3300035171 Bacteria 2461
118 Ga0373935_0062459 3300035692 Bacteria 2386
119 Ga0373927_0036884 3300035695 Bacteria 3178
120 Ga0373927_0038581 3300035695 Bacteria 3101
121 Ga0373947_0009937 3300035725 Bacteria 5466
122 Ga0373937_0052451 3300036401 Bacteria 3739
123 Ga0316584_0075447 3300036712 Bacteria 2527
124 Ga0373925_0022147 3300037068 Bacteria 4633
125 Ga0373925_0048173 3300037068 Bacteria 3174
126 Ga0373925_0122087 3300037068 Bacteria 2023
127 Ga0395899_0070111 3300037312 Bacteria 2566
128 Ga0395900_0130239 3300037418 Bacteria 2578
129 Ga0395898_0041194 3300037466 Bacteria 4562
130 Ga0395905_0109385 3300037471 Bacteria 2595
131 Ga0395905_0116988 3300037471 Bacteria 2505
132 Ga0436364_0444588 3300037853 Plasmid 3024
133 Ga0395901_0092083 3300038443 Bacteria 3173
134 Ga0400483_076297 3300039062 Bacteria 2596
135 Ga0436365_0456907 3300039437 Bacteria 1755
136 Ga0436360_0873426 3300039438 Bacteria 3568
137 Ga0436360_1078120 3300039438 Bacteria 1827
138 Ga0436361_0791731 3300039447 Bacteria 25564
139 Ga0436361_0851193 3300039447 Bacteria 3015
140 Ga0436361_1001341 3300039447 Bacteria 3168
141 Ga0436361_1085411 3300039447 Bacteria 2454
142 Ga0436363_1270630 3300039450 Unclassified 1408
143 Ga0436363_1659903 3300039450 Bacteria 3018
144 Ga0436362_0346347 3300039453 Plasmid 3380
145 Ga0436362_0349022 3300039453 Bacteria 2079
146 Ga0436362_0358018 3300039453 Bacteria 2712
147 Ga0451577_0100687 3300042876 Bacteria 2581
148 Ga0466961_0000545 3300044693 Bacteria 23967
149 Ga0466959_0128646 3300045049 Bacteria 1796
150 Ga0451576_0041678 3300045051 Bacteria 4852
151 Ga0466967_0125041 3300045976 Bacteria 2381
152 Ga0495592_0044493 3300046454 Bacteria 3316
153 Ga0495603_0008165 3300046455 Bacteria 6327
154 Ga0495629_0034948 3300046459 Bacteria 3553
155 Ga0495638_0002315 3300046460 Bacteria 15691
156 Ga0495641_0021049 3300046461 Bacteria 3290
157 Ga0495650_0020333 3300046471 Bacteria 3240
158 Ga0495580_0028836 3300046472 Bacteria 4032
159 Ga0495580_0031591 3300046472 Bacteria 3825
160 Ga0495582_0046765 3300046473 Bacteria 2383
161 Ga0495639_0009893 3300046475 Bacteria 4095
162 Ga0495664_0023340 3300046477 Bacteria 3590
163 Ga0495664_0039805 3300046477 Bacteria 2778
164 Ga0495584_0000112 3300046491 Bacteria 55586
165 Ga0495585_0039783 3300046492 Bacteria 2642
166 Ga0495594_0039433 3300046499 Bacteria 2583
167 Ga0495608_0038767 3300046511 Bacteria 3197
168 Ga0495618_0022683 3300046514 Bacteria 3877
169 Ga0495628_0051685 3300046516 Bacteria 3248
170 Ga0495630_0104458 3300046517 Bacteria 2144
171 Ga0495643_0054050 3300046522 Bacteria 2152
172 Ga0495648_0044363 3300046524 Bacteria 2776
173 Ga0495640_0039178 3300046533 Bacteria 3327
174 Ga0495586_0070600 3300046535 Bacteria 1907
175 Ga0495598_0006049 3300046537 Bacteria 2714
176 Ga0495609_0023253 3300046538 Bacteria 2849
177 Ga0495621_0003416 3300046539 Bacteria 4387
178 Ga0495621_0006653 3300046539 Bacteria 3384
179 Ga0495597_0021270 3300046542 Bacteria 3016
180 Ga0495634_0112865 3300046642 Bacteria 1746
181 Ga0495611_0020263 3300046648 Bacteria 2862
182 Ga0495635_0057816 3300046663 Bacteria 2668
183 Ga0495647_0010539 3300046681 Bacteria 3148
184 Ga0495669_0041175 3300046684 Bacteria 2051
185 Ga0495613_0018354 3300046689 Bacteria 5217
186 Ga0495624_0036184 3300046690 Bacteria 3185
187 Ga0495600_0110194 3300046809 Bacteria 1792
188 Ga0495660_0015895 3300046810 Bacteria 4343
189 Ga0495604_0136391 3300047317 Bacteria 1758
190 Ga0495674_0093611 3300047319 Bacteria 2564
191 Ga0495676_0047392 3300047321 Bacteria 3475
192 Ga0495602_0160881 3300048088 Bacteria 1753
193 Ga0495614_0021858 3300048089 Bacteria 2762
194 Ga0496105_0082295 3300048908 Bacteria 2659
195 Ga0496109_0210164 3300048912 Bacteria 1830
196 Ga0496110_0079463 3300048913 Bacteria 2920
197 Ga0496111_0059187 3300048914 Bacteria 2775
198 Ga0496121_0005550 3300048924 Bacteria 16109
199 Ga0496125_0000525 3300048928 Bacteria 66539
200 Ga0496126_0000074 3300048929 Bacteria 235643
201 Ga0501032_0044475 3300049569 Bacteria 3005
202 Ga0501034_0000372 3300049571 Bacteria 76350
203 Ga0501034_0004048 3300049571 Bacteria 16446
204 Ga0501034_0004536 3300049571 Bacteria 15433
205 Ga0501036_0059001 3300049572 Bacteria 3251
206 Ga0501039_0045599 3300049575 Bacteria 3387
207 Ga0501039_0154317 3300049575 Bacteria 1804
208 Ga0501040_0041693 3300049576 Bacteria 3126
209 Ga0501041_0023854 3300049577 Bacteria 3670
210 Ga0501042_0033218 3300049578 Bacteria 3657
211 Ga0501046_0055372 3300049580 Bacteria 3117
212 Ga0501048_0046108 3300049582 Bacteria 3112
213 Ga0501071_0038368 3300049587 Bacteria 3423
214 Ga0501072_0054329 3300049588 Bacteria 3155
215 Ga0501074_0051892 3300049590 Bacteria 2960
216 Ga0501075_0051877 3300049591 Bacteria 3084
217 Ga0501076_0041401 3300049592 Bacteria 3624
218 Ga0501077_0039713 3300049593 Bacteria 2998
219 Ga0501079_0038822 3300049741 Bacteria 3672
220 Ga0501080_0072864 3300049742 Bacteria 3195
221 Ga0501081_0041659 3300049743 Bacteria 3145
222 Ga0501083_0051584 3300049744 Bacteria 2766
223 Ga0501045_0052163 3300049824 Bacteria 2985
224 nmdc:mga08x19_89698_c1 3300050514 Unclassified 2028
225 Ga0495601_0050132 3300053077 Bacteria 2632
226 Ga0495595_0013960 3300053084 Bacteria 3401
227 Ga0495619_0042724 3300053085 Bacteria 2969
228 Ga0495619_0055496 3300053085 Bacteria 2624
229 Ga0500647_0017340 3300053091 Bacteria 3320
230 Ga0500618_008432 3300053125 Bacteria 2874
231 Ga0500573_0026508 3300053140 Bacteria 3331
232 Ga0500585_005501 3300053144 Bacteria 3258
233 Ga0500590_024513 3300053148 Bacteria 3131
234 Ga0500638_010878 3300053162 Bacteria 4009
235 Ga0501082_0053737 3300060353 Bacteria 3471
236 Ga0530510_0020843 3300061734 Bacteria 4662

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039450 Ga0436363_1270630 Ga0436363_1270630_80_1300 402
2 iso_pu_bacteria 2928108538 2928110697 404
3 iso_pu_bacteria 2928135762 2928140213 404
4 iso_pu_bacteria 8057132660 8057135997 411
5 3300046524 Ga0495648_0044363 Ga0495648_0044363_1420_2742 428
6 3300048929 Ga0496126_0000074 Ga0496126_0000074_234176_235570 428
7 3300046517 Ga0495630_0104458 Ga0495630_0104458_697_2094 438
8 3300046642 Ga0495634_0112865 Ga0495634_0112865_310_1707 438
9 3300037068 Ga0373925_0122087 Ga0373925_0122087_439_1860 442
10 3300039438 Ga0436360_1078120 Ga0436360_1078120_170_1606 442
11 3300009093 Ga0105240_10124918 Ga0105240_101249183 445
12 3300025913 Ga0207695_10108561 Ga0207695_101085611 445
13 3300001977 JGI24746J21847_1002355 JGI24746J21847_10023552 447
14 3300002155 JGI24033J26618_1001304 JGI24033J26618_10013041 447
15 3300025926 Ga0207659_10010859 Ga0207659_100108594 447
16 3300013307 Ga0157372_10136489 Ga0157372_101364894 449
17 3300025986 Ga0207658_10120420 Ga0207658_101204201 449
18 3300026067 Ga0207678_10036227 Ga0207678_100362273 449
19 3300042876 Ga0451577_0100687 Ga0451577_0100687_152_1705 453
20 3300039062 Ga0400483_076297 Ga0400483_076297_122_1624 456
21 3300014325 Ga0163163_10075724 Ga0163163_100757244 457
22 3300025925 Ga0207650_10071540 Ga0207650_100715403 457
23 3300026118 Ga0207675_100171589 Ga0207675_1001715892 459
24 3300021361 Ga0213872_10019547 Ga0213872_100195472 460
25 3300039447 Ga0436361_0851193 Ga0436361_0851193_1008_2543 460
26 3300007076 Ga0075435_100078690 Ga0075435_1000786902 461
27 3300031239 Ga0265328_10025783 Ga0265328_100257833 461
28 3300031344 Ga0265316_10041460 Ga0265316_100414604 461
29 iso_pu_bacteria 2513237083 2513566293 463
30 iso_pu_bacteria 8003955200 8003962501 463
31 3300005614 Ga0068856_100096611 Ga0068856_1000966111 464
32 3300026078 Ga0207702_10079481 Ga0207702_100794812 464
33 3300031239 Ga0265328_10007082 Ga0265328_100070824 465
34 3300003316 rootH1_10023439 rootH1_100234394 466
35 3300005328 Ga0070676_10047004 Ga0070676_100470042 467
36 3300005338 Ga0068868_100028188 Ga0068868_1000281883 467
37 3300025907 Ga0207645_10065604 Ga0207645_100656041 467
38 3300026023 Ga0207677_10029315 Ga0207677_100293152 467
39 3300026089 Ga0207648_10080821 Ga0207648_100808212 467
40 3300028794 Ga0307515_10149102 Ga0307515_101491022 467
41 3300031456 Ga0307513_10024878 Ga0307513_100248788 467
42 3300031838 Ga0307518_10011391 Ga0307518_100113913 467
43 3300028794 Ga0307515_10087244 Ga0307515_100872442 468
44 3300005331 Ga0070670_100082107 Ga0070670_1000821072 470
45 3300005347 Ga0070668_100091890 Ga0070668_1000918901 470
46 3300005354 Ga0070675_100023036 Ga0070675_1000230366 470
47 3300025925 Ga0207650_10027353 Ga0207650_100273532 470
48 3300025972 Ga0207668_10077775 Ga0207668_100777753 470
49 3300031251 Ga0265327_10041082 Ga0265327_100410823 471
50 3300046648 Ga0495611_0020263 Ga0495611_0020263_168_1775 471
51 3300036712 Ga0316584_0075447 Ga0316584_0075447_656_2179 472
52 3300005616 Ga0068852_100076035 Ga0068852_1000760354 474
53 3300026142 Ga0207698_10059583 Ga0207698_100595833 474
54 3300015262 Ga0182007_10013631 Ga0182007_100136313 476
55 3300015265 Ga0182005_1000099 Ga0182005_100009931 476
56 3300046522 Ga0495643_0054050 Ga0495643_0054050_218_1759 476
57 3300049572 Ga0501036_0059001 Ga0501036_0059001_984_2537 476
58 3300049575 Ga0501039_0045599 Ga0501039_0045599_660_2213 476
59 3300049576 Ga0501040_0041693 Ga0501040_0041693_536_2089 476
60 3300049577 Ga0501041_0023854 Ga0501041_0023854_1645_3198 476
61 3300049578 Ga0501042_0033218 Ga0501042_0033218_1072_2625 476
62 3300049580 Ga0501046_0055372 Ga0501046_0055372_813_2366 476
63 3300049582 Ga0501048_0046108 Ga0501048_0046108_912_2465 476
64 3300049587 Ga0501071_0038368 Ga0501071_0038368_1028_2581 476
65 3300049588 Ga0501072_0054329 Ga0501072_0054329_1110_2726 476
66 3300049590 Ga0501074_0051892 Ga0501074_0051892_441_1994 476
67 3300049591 Ga0501075_0051877 Ga0501075_0051877_959_2512 476
68 3300049592 Ga0501076_0041401 Ga0501076_0041401_1356_2909 476
69 3300049593 Ga0501077_0039713 Ga0501077_0039713_891_2444 476
70 3300049741 Ga0501079_0038822 Ga0501079_0038822_1494_3047 476
71 3300049742 Ga0501080_0072864 Ga0501080_0072864_641_2194 476
72 3300049743 Ga0501081_0041659 Ga0501081_0041659_964_2517 476
73 3300049744 Ga0501083_0051584 Ga0501083_0051584_736_2289 476
74 3300049824 Ga0501045_0052163 Ga0501045_0052163_970_2523 476
75 3300060353 Ga0501082_0053737 Ga0501082_0053737_1263_2816 476
76 3300061734 Ga0530510_0020843 Ga0530510_0020843_1408_2961 476
77 3300021377 Ga0213874_10007138 Ga0213874_100071383 477
78 3300039450 Ga0436363_1659903 Ga0436363_1659903_1044_2606 477
79 3300048928 Ga0496125_0000525 Ga0496125_0000525_23352_24842 477
80 3300053077 Ga0495601_0050132 Ga0495601_0050132_153_1637 477
81 3300053085 Ga0495619_0055496 Ga0495619_0055496_1016_2500 477
82 3300006844 Ga0075428_100109809 Ga0075428_1001098094 479
83 3300006846 Ga0075430_100098808 Ga0075430_1000988082 479
84 3300039447 Ga0436361_1001341 Ga0436361_1001341_553_2100 479
85 3300039453 Ga0436362_0358018 Ga0436362_0358018_221_1768 479
86 3300046809 Ga0495600_0110194 Ga0495600_0110194_215_1780 479
87 3300046538 Ga0495609_0023253 Ga0495609_0023253_451_1992 480
88 3300046472 Ga0495580_0028836 Ga0495580_0028836_176_1768 482
89 3300048924 Ga0496121_0005550 Ga0496121_0005550_42_1634 482
90 iso_pu_bacteria 2908446538 2908449549 482
91 iso_pu_bacteria 8019775933 8019781310 482
92 3300021358 Ga0213873_10002864 Ga0213873_100028642 483
93 3300037471 Ga0395905_0116988 Ga0395905_0116988_539_2131 483
94 3300039453 Ga0436362_0346347 Ga0436362_0346347_859_2427 483
95 3300039453 Ga0436362_0349022 Ga0436362_0349022_93_1661 483
96 3300050514 nmdc:mga08x19_89698_c1 nmdc:mga08x19_89698_c1_59_1627 483
97 iso_pu_bacteria 2899259804 2899261386 483
98 iso_pu_bacteria 2899259804 2899262905 483
99 3300006914 Ga0075436_100100762 Ga0075436_1001007621 484
100 3300039438 Ga0436360_0873426 Ga0436360_0873426_975_2543 484
101 3300049569 Ga0501032_0044475 Ga0501032_0044475_576_2075 485
102 3300049571 Ga0501034_0000372 Ga0501034_0000372_57424_58923 485
103 3300049571 Ga0501034_0004048 Ga0501034_0004048_711_2210 485
104 3300049571 Ga0501034_0004536 Ga0501034_0004536_12964_14463 485
105 3300005288 Ga0065714_10067076 Ga0065714_100670765 486
106 3300046460 Ga0495638_0002315 Ga0495638_0002315_2432_3958 486
107 3300046542 Ga0495597_0021270 Ga0495597_0021270_862_2388 486
108 3300049575 Ga0501039_0154317 Ga0501039_0154317_90_1598 487
109 3300021377 Ga0213874_10009120 Ga0213874_100091203 488
110 3300045049 Ga0466959_0128646 Ga0466959_0128646_196_1746 488
111 iso_pu_bacteria 2513237166 2514055188 489
112 iso_pu_bacteria 2842849001 2842849509 489
113 3300045976 Ga0466967_0125041 Ga0466967_0125041_39_1562 490
114 3300046537 Ga0495598_0006049 Ga0495598_0006049_752_2353 490
115 3300046539 Ga0495621_0003416 Ga0495621_0003416_977_2578 490
116 3300046684 Ga0495669_0041175 Ga0495669_0041175_279_1880 490
117 3300006353 Ga0075370_10019050 Ga0075370_100190502 491
118 3300021361 Ga0213872_10016938 Ga0213872_100169384 491
119 3300028666 Ga0265336_10000309 Ga0265336_100003095 491
120 3300029957 Ga0265324_10000353 Ga0265324_1000035321 491
121 3300031507 Ga0307509_10069891 Ga0307509_100698914 491
122 3300031507 Ga0307509_10087988 Ga0307509_100879883 491
123 3300031616 Ga0307508_10065028 Ga0307508_100650283 491
124 3300037471 Ga0395905_0109385 Ga0395905_0109385_296_1894 491
125 3300046472 Ga0495580_0031591 Ga0495580_0031591_1255_2859 491
126 3300048912 Ga0496109_0210164 Ga0496109_0210164_131_1753 491
127 3300048913 Ga0496110_0079463 Ga0496110_0079463_1046_2668 491
128 3300048914 Ga0496111_0059187 Ga0496111_0059187_229_1851 491
129 3300002077 JGI24744J21845_10002454 JGI24744J21845_100024544 492
130 3300005539 Ga0068853_100006345 Ga0068853_1000063454 492
131 3300005544 Ga0070686_100042537 Ga0070686_1000425372 492
132 3300005563 Ga0068855_100081516 Ga0068855_1000815164 492
133 3300005615 Ga0070702_100021678 Ga0070702_1000216784 492
134 3300005616 Ga0068852_100032081 Ga0068852_1000320813 492
135 3300005719 Ga0068861_100073177 Ga0068861_1000731772 492
136 3300006358 Ga0068871_100070438 Ga0068871_1000704382 492
137 3300009093 Ga0105240_10030891 Ga0105240_100308913 492
138 3300009174 Ga0105241_10045753 Ga0105241_100457532 492
139 3300009545 Ga0105237_10081647 Ga0105237_100816472 492
140 3300009551 Ga0105238_10081586 Ga0105238_100815862 492
141 3300010375 Ga0105239_10098945 Ga0105239_100989452 492
142 3300025290 Ga0207673_1000662 Ga0207673_10006625 492
143 3300025315 Ga0207697_10009077 Ga0207697_100090776 492
144 3300025911 Ga0207654_10024433 Ga0207654_100244332 492
145 3300025913 Ga0207695_10021078 Ga0207695_100210785 492
146 3300025914 Ga0207671_10046129 Ga0207671_100461292 492
147 3300025918 Ga0207662_10027527 Ga0207662_100275273 492
148 3300025924 Ga0207694_10003519 Ga0207694_100035193 492
149 3300025942 Ga0207689_10052729 Ga0207689_100527293 492
150 3300026041 Ga0207639_10047725 Ga0207639_100477253 492
151 3300026067 Ga0207678_10048038 Ga0207678_100480383 492
152 3300026142 Ga0207698_10009134 Ga0207698_100091344 492
153 3300028666 Ga0265336_10000324 Ga0265336_1000032421 492
154 3300031616 Ga0307508_10058353 Ga0307508_100583534 492
155 3300035089 Ga0373944_0006239 Ga0373944_0006239_486_2093 492
156 3300035170 Ga0373943_0017349 Ga0373943_0017349_997_2604 492
157 3300035171 Ga0373946_0022339 Ga0373946_0022339_692_2299 492
158 3300035692 Ga0373935_0062459 Ga0373935_0062459_679_2286 492
159 3300035695 Ga0373927_0036884 Ga0373927_0036884_1436_3043 492
160 3300035695 Ga0373927_0038581 Ga0373927_0038581_559_2166 492
161 3300035725 Ga0373947_0009937 Ga0373947_0009937_1040_2647 492
162 3300036401 Ga0373937_0052451 Ga0373937_0052451_524_2131 492
163 3300037068 Ga0373925_0022147 Ga0373925_0022147_614_2221 492
164 3300037068 Ga0373925_0048173 Ga0373925_0048173_943_2550 492
165 3300037853 Ga0436364_0444588 Ga0436364_0444588_455_2023 492
166 3300039447 Ga0436361_0791731 Ga0436361_0791731_4584_6206 492
167 3300045051 Ga0451576_0041678 Ga0451576_0041678_1627_3255 492
168 3300046454 Ga0495592_0044493 Ga0495592_0044493_598_2226 492
169 3300046455 Ga0495603_0008165 Ga0495603_0008165_4197_5804 492
170 3300046459 Ga0495629_0034948 Ga0495629_0034948_1116_2723 492
171 3300046461 Ga0495641_0021049 Ga0495641_0021049_996_2603 492
172 3300046473 Ga0495582_0046765 Ga0495582_0046765_640_2247 492
173 3300046475 Ga0495639_0009893 Ga0495639_0009893_620_2248 492
174 3300046477 Ga0495664_0039805 Ga0495664_0039805_696_2303 492
175 3300046499 Ga0495594_0039433 Ga0495594_0039433_487_2094 492
176 3300046511 Ga0495608_0038767 Ga0495608_0038767_656_2284 492
177 3300046514 Ga0495618_0022683 Ga0495618_0022683_722_2350 492
178 3300046516 Ga0495628_0051685 Ga0495628_0051685_651_2279 492
179 3300046533 Ga0495640_0039178 Ga0495640_0039178_673_2301 492
180 3300046535 Ga0495586_0070600 Ga0495586_0070600_46_1653 492
181 3300046539 Ga0495621_0006653 Ga0495621_0006653_1110_2717 492
182 3300046663 Ga0495635_0057816 Ga0495635_0057816_680_2287 492
183 3300046681 Ga0495647_0010539 Ga0495647_0010539_618_2225 492
184 3300046689 Ga0495613_0018354 Ga0495613_0018354_717_2345 492
185 3300046690 Ga0495624_0036184 Ga0495624_0036184_553_2160 492
186 3300047319 Ga0495674_0093611 Ga0495674_0093611_82_1689 492
187 3300047321 Ga0495676_0047392 Ga0495676_0047392_603_2210 492
188 3300048089 Ga0495614_0021858 Ga0495614_0021858_481_2088 492
189 3300048908 Ga0496105_0082295 Ga0496105_0082295_174_1781 492
190 3300053084 Ga0495595_0013960 Ga0495595_0013960_829_2436 492
191 3300053085 Ga0495619_0042724 Ga0495619_0042724_975_2582 492
192 3300053091 Ga0500647_0017340 Ga0500647_0017340_712_2340 492
193 3300053140 Ga0500573_0026508 Ga0500573_0026508_672_2303 492
194 3300053144 Ga0500585_005501 Ga0500585_005501_1030_2658 492
195 3300053148 Ga0500590_024513 Ga0500590_024513_907_2535 492
196 3300053162 Ga0500638_010878 Ga0500638_010878_1168_2796 492
197 3300021384 Ga0213876_10021412 Ga0213876_100214123 493
198 3300039437 Ga0436365_0456907 Ga0436365_0456907_69_1640 493
199 3300037312 Ga0395899_0070111 Ga0395899_0070111_941_2521 494
200 3300037418 Ga0395900_0130239 Ga0395900_0130239_648_2228 494
201 3300037466 Ga0395898_0041194 Ga0395898_0041194_1541_3121 494
202 3300038443 Ga0395901_0092083 Ga0395901_0092083_674_2254 494
203 3300039447 Ga0436361_1085411 Ga0436361_1085411_127_1677 494
204 3300047317 Ga0495604_0136391 Ga0495604_0136391_56_1687 494
205 3300048088 Ga0495602_0160881 Ga0495602_0160881_98_1729 494
206 3300046491 Ga0495584_0000112 Ga0495584_0000112_9631_11268 495
207 iso_pu_bacteria 2738543018 2739277203 495
208 3300053125 Ga0500618_008432 Ga0500618_008432_101_1642 498
209 3300046810 Ga0495660_0015895 Ga0495660_0015895_496_2067 499
210 iso_pu_bacteria 642555113 642923264 499
211 3300006175 Ga0070712_100110574 Ga0070712_1001105742 500
212 3300005339 Ga0070660_100003451 Ga0070660_1000034511 501
213 3300005344 Ga0070661_100007031 Ga0070661_1000070314 501
214 3300005564 Ga0070664_100058046 Ga0070664_1000580463 501
215 3300025919 Ga0207657_10004467 Ga0207657_100044673 501
216 3300025920 Ga0207649_10027994 Ga0207649_100279942 501
217 iso_pu_bacteria 2870068957 2870073034 501
218 iso_pu_bacteria 2870068957 2870076372 501
219 iso_pu_bacteria 2928058823 2928063984 502
220 iso_pu_bacteria 641736151 642427004 502
221 3300046492 Ga0495585_0039783 Ga0495585_0039783_196_1761 504
222 3300044693 Ga0466961_0000545 Ga0466961_0000545_21197_22759 505
223 3300046471 Ga0495650_0020333 Ga0495650_0020333_1060_2631 506
224 3300046477 Ga0495664_0023340 Ga0495664_0023340_337_1929 506
225 iso_pu_bacteria 2885266251 2885267819 507
226 3300001915 JGI24741J21665_1005042 JGI24741J21665_10050423 511
227 3300001979 JGI24740J21852_10002727 JGI24740J21852_100027274 511
228 3300003751 Ga0055538_1001954 Ga0055538_10019543 511
229 3300003756 Ga0055533_1000924 Ga0055533_10009245 511
230 3300003762 Ga0055542_1000627 Ga0055542_100062742 511
231 3300003841 Ga0055541_1000936 Ga0055541_10009367 511
232 3300005337 Ga0070682_100015375 Ga0070682_1000153754 511
233 3300005344 Ga0070661_100000020 Ga0070661_10000002089 511
234 3300005455 Ga0070663_100055957 Ga0070663_1000559573 511
235 3300005564 Ga0070664_100079351 Ga0070664_1000793513 511
236 3300005578 Ga0068854_100027418 Ga0068854_1000274188 511
237 3300005614 Ga0068856_100000127 Ga0068856_1000001272 511
238 3300009093 Ga0105240_10104334 Ga0105240_101043345 511
239 3300013100 Ga0157373_10000025 Ga0157373_1000002567 511
240 3300013102 Ga0157371_10054973 Ga0157371_100549733 511
241 3300013104 Ga0157370_10000027 Ga0157370_1000002767 511
242 3300020077 Ga0206351_10499978 Ga0206351_104999785 511
243 3300020610 Ga0154015_1022863 Ga0154015_102286313 511
244 3300025224 Ga0209784_101330 Ga0209784_1013303 511
245 3300025225 Ga0209566_101447 Ga0209566_1014472 511
246 3300025226 Ga0209674_103550 Ga0209674_1035502 511
247 3300025253 Ga0209677_101826 Ga0209677_1018265 511
248 3300025254 Ga0209148_1005657 Ga0209148_10056572 511
249 3300025913 Ga0207695_10028067 Ga0207695_100280675 511
250 3300025920 Ga0207649_10000059 Ga0207649_1000005917 511
251 3300025945 Ga0207679_10059952 Ga0207679_100599523 511
252 3300025981 Ga0207640_10000175 Ga0207640_1000017538 511
253 3300026067 Ga0207678_10000009 Ga0207678_10000009140 511
254 3300026078 Ga0207702_10000896 Ga0207702_100008962 511

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13817

DDE_Tnp_IS66_C

IS66 C-terminal element

493

530

0.99

PF03050

DDE_Tnp_IS66

Transposase IS66 family

197

487

0.98

PF13005

zf-IS66

zinc-finger binding domain of transposase IS66

140

183

0.95

PF13007

LZ_Tnp_IS66

Transposase C of IS166 homeodomain

45

132

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xgx-assembly1.cif.gz_B iscth4 transposase, strand transfer complex 1, stc1 0.6753 176 470
6xg8-assembly1.cif.gz_B iscth4 transposase, pre-cleaved complex, pcc 0.6707 176 469
7nhm-assembly1.cif.gz_f 70s ribosome from staphylococcus aureus 0.5982 240 284
6xgw-assembly1.cif.gz_B iscth4 transposase, pre-reaction complex, prc 0.5841 176 467
3gft-assembly5.cif.gz_E human k-ras (q61h) in complex with a gtp analogue 0.5839 96 144
ID Description Score Start End Superfamily
4ebkB01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.6891 121 144 3.30.460.10
af_B7EIH2_1_91_2.40.330.10 Mainly Beta;Beta Barrel;At1g16640 B3 domain;DNA-binding pseudobarrel domain 0.6805 121 144 2.40.330.10
af_O06367_1_380_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6737 125 458 3.30.420.10
af_P96354_1_380_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6568 110 460 3.30.420.10
af_E7F0M0_148_296_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6477 237 322 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A095CPB4-F1-model_v4 deleted 0.9869 174 500
AF-A0A3W4K7D7-F1-model_v4 deleted 0.9855 91 500
AF-A0A1G7HH17-F1-model_v4 IS66 C-terminal element 0.9837 183 499
AF-E7SSP0-F1-model_v4 deleted 0.9832 212 500
AF-A0A089NYX5-F1-model_v4 Putative transposase 0.9824 128 226

Feature Viewer

pLDDT pTM Quality
84.78 0.76 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map