F364703
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 254 | 172 | 508 | 430 |
Family's Representative Sequence
| Representative Sequence | 3300005471|Ga0070698_100118573|Ga0070698_1001185731 |
| Length | 452 |
| Sequence | MPFPKWIRWNINLWFVVVTAAATIFAGVEMLLAAGPETKAPSPGMATATPASLSPIPVPDLLAQPRSLKQFGVPLLQTLAEIPTDNPQTPGRIALGEKLFFEPRLSVDRTVACASCHNPDRAFTDGKPASVGFKGRVGQRNAPTILNALYNKKQFWDGRAETLEDQAAFLITNPSEMGQPSLDAAVATIAAIPEYQQAFQQVFNRPPSALNMVRAIASYERTLVSFDSPFDHFIAGDPNAINDAAKRGWTLFNTRGHCNRCHASVNQDATYLTDFDFHNIGIGILRHNVTSLALQAMQQIENGDLPNVDRAAIQSDFSVLGRFLLTRKEADIASFKTPTLRNVLVTAPYFHDGSMETLWDAMDHYNKGDGVKDPWLDDDMQPLALTEDEIDDLVEFLASLTSAEYKELGIKELVRQRALSRISRSQRDTARAFGPKPPRPKVPDLLHNSLHP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 2 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 5 | 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 6 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 7 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 12 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 30 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 31 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 32 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 33 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 36 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 37 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 39 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 40 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 41 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 42 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 43 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 44 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 45 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 47 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 48 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 84 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 85 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 86 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 87 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 88 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 89 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 90 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 91 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 92 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 93 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 94 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 95 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 96 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 97 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 98 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 129 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 130 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 131 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 132 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 133 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 134 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 135 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 136 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 137 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 138 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 139 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 140 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 141 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 144 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 149 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 151 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 152 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 153 | 2513237098 | Bradyrhizobium elkanii WSM2783 | Isolate | Nodule |
| 154 | 2513237141 | Bradyrhizobium sp. TV2a.2 | Isolate | Nodule |
| 155 | 2524023210 | Bradyrhizobium sp. Ai1a-2 | Isolate | Nodule |
| 156 | 2824617872 | Bradyrhizobium sp. HAMBI 2133 | Isolate | Unclassified |
| 157 | 2824626560 | Bradyrhizobium sp. HAMBI 2149 | Isolate | Unclassified |
| 158 | 2824635225 | Bradyrhizobium sp. HAMBI 2136 | Isolate | Unclassified |
| 159 | 2824644064 | Bradyrhizobium sp. HAMBI 2137 | Isolate | Unclassified |
| 160 | 2824661429 | Bradyrhizobium sp. HAMBI 2115 | Isolate | Unclassified |
| 161 | 2824723954 | Bradyrhizobium sp. HAMBI 2152 | Isolate | Unclassified |
| 162 | 2885383462 | Bradyrhizobium sp. Leo170 | Isolate | Unclassified |
| 163 | 2903768456 | Bradyrhizobium sp. Leo121 | Isolate | Unclassified |
| 164 | 2933577622 | Bradyrhizobium japonicum SEMIA 417 | Isolate | Nodule |
| 165 | 2935684952 | Bradyrhizobium sp. LA3.X | Isolate | Nodule |
| 166 | 2935713505 | Bradyrhizobium sp. LA6.12 | Isolate | Nodule |
| 167 | 2935722832 | Bradyrhizobium sp. LA6.3 | Isolate | Nodule |
| 168 | 2935732158 | Bradyrhizobium sp. LA6.4 | Isolate | Nodule |
| 169 | 2935741537 | Bradyrhizobium sp. LA6.7 | Isolate | Nodule |
| 170 | 2935750917 | Bradyrhizobium sp. LA6.8 | Isolate | Nodule |
| 171 | 2940556831 | Bradyrhizobium sp. LA8.1 | Isolate | Nodule |
| 172 | 8055742211 | Bradyrhizobium japonicum 5038 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 92.13 |
| Metatranscriptomes | 0 |
| Isolates | 7.87 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.76 |
| Nodule | 4.72 |
| Rhizoplane | 2.76 |
| Rhizosphere | 82.28 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 5.91 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070698_100118573 | 3300005471 | Unclassified | 2607 |
| 2 | JGI25153J46596_10002386 | 3300003215 | Bacteria | 10861 |
| 3 | rootL2_10089891 | 3300003322 | Bacteria | 1924 |
| 4 | JGI25160J50197_1012310 | 3300003354 | Bacteria | 2978 |
| 5 | JGI25405J52794_10000156 | 3300003911 | Bacteria | 8380 |
| 6 | Ga0065707_10020874 | 3300005295 | Bacteria | 3082 |
| 7 | Ga0070690_100010935 | 3300005330 | Bacteria | 5297 |
| 8 | Ga0070670_100172276 | 3300005331 | Bacteria | 1877 |
| 9 | Ga0070680_100047813 | 3300005336 | Bacteria | 3485 |
| 10 | Ga0070660_100195256 | 3300005339 | Bacteria | 1640 |
| 11 | Ga0070689_100084448 | 3300005340 | Bacteria | 2495 |
| 12 | Ga0070692_10011052 | 3300005345 | Bacteria | 4132 |
| 13 | Ga0070659_100023480 | 3300005366 | Bacteria | 4719 |
| 14 | Ga0070714_100206171 | 3300005435 | Bacteria | 1800 |
| 15 | Ga0070713_100274594 | 3300005436 | Bacteria | 1545 |
| 16 | Ga0070711_100046746 | 3300005439 | Bacteria | 2950 |
| 17 | Ga0070711_100152976 | 3300005439 | Bacteria | 1741 |
| 18 | Ga0070708_100007219 | 3300005445 | Bacteria | 8877 |
| 19 | Ga0070708_100081855 | 3300005445 | Bacteria | 2923 |
| 20 | Ga0070708_100202123 | 3300005445 | Bacteria | 1860 |
| 21 | Ga0070663_100009376 | 3300005455 | Bacteria | 6059 |
| 22 | Ga0070706_100001452 | 3300005467 | Bacteria | 24945 |
| 23 | Ga0070706_100011768 | 3300005467 | Bacteria | 8120 |
| 24 | Ga0070706_100012195 | 3300005467 | Bacteria | 7966 |
| 25 | Ga0070706_100012701 | 3300005467 | Bacteria | 7792 |
| 26 | Ga0070706_100024996 | 3300005467 | Bacteria | 5498 |
| 27 | Ga0070706_100048179 | 3300005467 | Bacteria | 3933 |
| 28 | Ga0070706_100069143 | 3300005467 | Bacteria | 3266 |
| 29 | Ga0070706_100095129 | 3300005467 | Bacteria | 2764 |
| 30 | Ga0070707_100002945 | 3300005468 | Bacteria | 16161 |
| 31 | Ga0070707_100019031 | 3300005468 | Bacteria | 6466 |
| 32 | Ga0070707_100020309 | 3300005468 | Bacteria | 6264 |
| 33 | Ga0070707_100032756 | 3300005468 | Bacteria | 4953 |
| 34 | Ga0070707_100096995 | 3300005468 | Bacteria | 2855 |
| 35 | Ga0070698_100000705 | 3300005471 | Bacteria | 35680 |
| 36 | Ga0070698_100012919 | 3300005471 | Bacteria | 8842 |
| 37 | Ga0070698_100015423 | 3300005471 | Bacteria | 8073 |
| 38 | Ga0070699_100019176 | 3300005518 | Bacteria | 5885 |
| 39 | Ga0070699_100033715 | 3300005518 | Bacteria | 4424 |
| 40 | Ga0070699_100081103 | 3300005518 | Bacteria | 2828 |
| 41 | Ga0070699_100150678 | 3300005518 | Bacteria | 2057 |
| 42 | Ga0070684_100062358 | 3300005535 | Bacteria | 3265 |
| 43 | Ga0070697_100006590 | 3300005536 | Bacteria | 9001 |
| 44 | Ga0070697_100008029 | 3300005536 | Bacteria | 8227 |
| 45 | Ga0070697_100035645 | 3300005536 | Bacteria | 4015 |
| 46 | Ga0070697_100154265 | 3300005536 | Bacteria | 1937 |
| 47 | Ga0070697_100155765 | 3300005536 | Unclassified | 1928 |
| 48 | Ga0070695_100003754 | 3300005545 | Bacteria | 8860 |
| 49 | Ga0070693_100007292 | 3300005547 | Bacteria | 5400 |
| 50 | Ga0070665_100115126 | 3300005548 | Bacteria | 2691 |
| 51 | Ga0068855_100114405 | 3300005563 | Bacteria | 3093 |
| 52 | Ga0070664_100016062 | 3300005564 | Bacteria | 6134 |
| 53 | Ga0068856_100019227 | 3300005614 | Bacteria | 6631 |
| 54 | Ga0068859_100035066 | 3300005617 | Bacteria | 5033 |
| 55 | Ga0068864_100049737 | 3300005618 | Bacteria | 3607 |
| 56 | Ga0068861_100140374 | 3300005719 | Bacteria | 1971 |
| 57 | Ga0068863_100291293 | 3300005841 | Bacteria | 1582 |
| 58 | Ga0068860_100023478 | 3300005843 | Bacteria | 5960 |
| 59 | Ga0081455_10000501 | 3300005937 | Bacteria | 50802 |
| 60 | Ga0081455_10002992 | 3300005937 | Bacteria | 19712 |
| 61 | Ga0081540_1012135 | 3300005983 | Bacteria | 5697 |
| 62 | Ga0081540_1024466 | 3300005983 | Bacteria | 3504 |
| 63 | Ga0070717_10004056 | 3300006028 | Bacteria | 10551 |
| 64 | Ga0070717_10059800 | 3300006028 | Unclassified | 3154 |
| 65 | Ga0070717_10096868 | 3300006028 | Bacteria | 2499 |
| 66 | Ga0075365_10055140 | 3300006038 | Bacteria | 2638 |
| 67 | Ga0075369_10021781 | 3300006186 | Bacteria | 2638 |
| 68 | Ga0068871_100089318 | 3300006358 | Bacteria | 2565 |
| 69 | Ga0075428_100052403 | 3300006844 | Bacteria | 4473 |
| 70 | Ga0075433_10067540 | 3300006852 | Unclassified | 3138 |
| 71 | Ga0075434_100005399 | 3300006871 | Bacteria | 11632 |
| 72 | Ga0075434_100036621 | 3300006871 | Bacteria | 4854 |
| 73 | Ga0075434_100050020 | 3300006871 | Bacteria | 4152 |
| 74 | Ga0075434_100238707 | 3300006871 | Unclassified | 1838 |
| 75 | Ga0075436_100071977 | 3300006914 | Bacteria | 2391 |
| 76 | Ga0097620_100035064 | 3300006931 | Bacteria | 5033 |
| 77 | Ga0075435_100001980 | 3300007076 | Bacteria | 13369 |
| 78 | Ga0075435_100137497 | 3300007076 | Bacteria | 2048 |
| 79 | Ga0099794_10000444 | 3300007265 | Bacteria | 13850 |
| 80 | Ga0099794_10016750 | 3300007265 | Bacteria | 3255 |
| 81 | Ga0099794_10019251 | 3300007265 | Bacteria | 3072 |
| 82 | Ga0099794_10021801 | 3300007265 | Unclassified | 2914 |
| 83 | Ga0099794_10033390 | 3300007265 | Bacteria | 2419 |
| 84 | Ga0099794_10042103 | 3300007265 | Bacteria | 2176 |
| 85 | Ga0105240_10066797 | 3300009093 | Bacteria | 4460 |
| 86 | Ga0105245_10009871 | 3300009098 | Bacteria | 8314 |
| 87 | Ga0114129_10021650 | 3300009147 | Bacteria | 9124 |
| 88 | Ga0114129_10074195 | 3300009147 | Bacteria | 4738 |
| 89 | Ga0114129_10101138 | 3300009147 | Bacteria | 3989 |
| 90 | Ga0114129_10116098 | 3300009147 | Bacteria | 3689 |
| 91 | Ga0114129_10419281 | 3300009147 | Bacteria | 1761 |
| 92 | Ga0105242_10260595 | 3300009176 | Bacteria | 1566 |
| 93 | Ga0105249_10344997 | 3300009553 | Bacteria | 1507 |
| 94 | Ga0105246_10009543 | 3300011119 | Bacteria | 5980 |
| 95 | Ga0157373_10034682 | 3300013100 | Bacteria | 3624 |
| 96 | Ga0157374_10027471 | 3300013296 | Bacteria | 5135 |
| 97 | Ga0157374_10202619 | 3300013296 | Bacteria | 1943 |
| 98 | Ga0157378_10017852 | 3300013297 | Bacteria | 6227 |
| 99 | Ga0157378_10288558 | 3300013297 | Unclassified | 1584 |
| 100 | Ga0163162_10064871 | 3300013306 | Bacteria | 3698 |
| 101 | Ga0163162_10175070 | 3300013306 | Unclassified | 2271 |
| 102 | Ga0163162_10269696 | 3300013306 | Bacteria | 1833 |
| 103 | Ga0157375_10006416 | 3300013308 | Bacteria | 10253 |
| 104 | Ga0157380_10299595 | 3300014326 | Bacteria | 1480 |
| 105 | Ga0157376_10236229 | 3300014969 | Bacteria | 1701 |
| 106 | Ga0163161_10089734 | 3300017792 | Bacteria | 2274 |
| 107 | Ga0163161_10222634 | 3300017792 | Unclassified | 1461 |
| 108 | Ga0209758_1000082 | 3300025297 | Bacteria | 258835 |
| 109 | Ga0207426_1000944 | 3300025302 | Bacteria | 28728 |
| 110 | Ga0207692_10032978 | 3300025898 | Bacteria | 2493 |
| 111 | Ga0207699_10028764 | 3300025906 | Bacteria | 3093 |
| 112 | Ga0207684_10000126 | 3300025910 | Bacteria | 140178 |
| 113 | Ga0207684_10005021 | 3300025910 | Bacteria | 12336 |
| 114 | Ga0207684_10007564 | 3300025910 | Bacteria | 9768 |
| 115 | Ga0207684_10009285 | 3300025910 | Bacteria | 8687 |
| 116 | Ga0207684_10012798 | 3300025910 | Bacteria | 7271 |
| 117 | Ga0207684_10014259 | 3300025910 | Bacteria | 6856 |
| 118 | Ga0207684_10023619 | 3300025910 | Bacteria | 5249 |
| 119 | Ga0207684_10027854 | 3300025910 | Bacteria | 4813 |
| 120 | Ga0207684_10048734 | 3300025910 | Bacteria | 3593 |
| 121 | Ga0207684_10050936 | 3300025910 | Bacteria | 3513 |
| 122 | Ga0207684_10059338 | 3300025910 | Bacteria | 3248 |
| 123 | Ga0207684_10066039 | 3300025910 | Bacteria | 3072 |
| 124 | Ga0207684_10128455 | 3300025910 | Bacteria | 2175 |
| 125 | Ga0207684_10202767 | 3300025910 | Bacteria | 1711 |
| 126 | Ga0207695_10067885 | 3300025913 | Unclassified | 3655 |
| 127 | Ga0207693_10037748 | 3300025915 | Bacteria | 3807 |
| 128 | Ga0207693_10163840 | 3300025915 | Bacteria | 1750 |
| 129 | Ga0207660_10156232 | 3300025917 | Bacteria | 1756 |
| 130 | Ga0207646_10000020 | 3300025922 | Bacteria | 272909 |
| 131 | Ga0207646_10003500 | 3300025922 | Bacteria | 17701 |
| 132 | Ga0207646_10005202 | 3300025922 | Bacteria | 13748 |
| 133 | Ga0207646_10006903 | 3300025922 | Bacteria | 11660 |
| 134 | Ga0207646_10012239 | 3300025922 | Bacteria | 8254 |
| 135 | Ga0207646_10054079 | 3300025922 | Bacteria | 3592 |
| 136 | Ga0207700_10187532 | 3300025928 | Bacteria | 1736 |
| 137 | Ga0207664_10015023 | 3300025929 | Bacteria | 5607 |
| 138 | Ga0207690_10003110 | 3300025932 | Bacteria | 9996 |
| 139 | Ga0207706_10169854 | 3300025933 | Unclassified | 1916 |
| 140 | Ga0207686_10018480 | 3300025934 | Bacteria | 3948 |
| 141 | Ga0207665_10017394 | 3300025939 | Bacteria | 4724 |
| 142 | Ga0207665_10022239 | 3300025939 | Bacteria | 4170 |
| 143 | Ga0207665_10143408 | 3300025939 | Bacteria | 1705 |
| 144 | Ga0207689_10038735 | 3300025942 | Bacteria | 3947 |
| 145 | Ga0207668_10056843 | 3300025972 | Unclassified | 2727 |
| 146 | Ga0207641_10127197 | 3300026088 | Bacteria | 2283 |
| 147 | Ga0207675_100217536 | 3300026118 | Bacteria | 1840 |
| 148 | Ga0209588_1000116 | 3300027671 | Bacteria | 23529 |
| 149 | Ga0209588_1014791 | 3300027671 | Bacteria | 2394 |
| 150 | Ga0268264_10156002 | 3300028381 | Bacteria | 2051 |
| 151 | Ga0265314_10048336 | 3300031711 | Bacteria | 2986 |
| 152 | Ga0307416_100082171 | 3300032002 | Bacteria | 2728 |
| 153 | Ga0373943_0038046 | 3300035170 | Bacteria | 2312 |
| 154 | Ga0373935_0051047 | 3300035692 | Bacteria | 2626 |
| 155 | Ga0373927_0005065 | 3300035695 | Bacteria | 9122 |
| 156 | Ga0373927_0012938 | 3300035695 | Bacteria | 5549 |
| 157 | Ga0373927_0027626 | 3300035695 | Bacteria | 3705 |
| 158 | Ga0373933_0001780 | 3300035724 | Bacteria | 12471 |
| 159 | Ga0373947_0016724 | 3300035725 | Bacteria | 4215 |
| 160 | Ga0373937_0000602 | 3300036401 | Bacteria | 31730 |
| 161 | Ga0373925_0153292 | 3300037068 | Bacteria | 1811 |
| 162 | Ga0395898_0228657 | 3300037466 | Bacteria | 1774 |
| 163 | Ga0395905_0025308 | 3300037471 | Bacteria | 5597 |
| 164 | Ga0395905_0082919 | 3300037471 | Bacteria | 3004 |
| 165 | Ga0436360_0665754 | 3300039438 | Bacteria | 1998 |
| 166 | Ga0436360_0951768 | 3300039438 | Bacteria | 2024 |
| 167 | Ga0436361_0244495 | 3300039447 | Bacteria | 2406 |
| 168 | Ga0451577_0128058 | 3300042876 | Bacteria | 2276 |
| 169 | Ga0453683_0000812 | 3300044673 | Bacteria | 30553 |
| 170 | Ga0495603_0000422 | 3300046455 | Bacteria | 23371 |
| 171 | Ga0495651_0000757 | 3300046462 | Bacteria | 24981 |
| 172 | Ga0495653_0028462 | 3300046463 | Bacteria | 4467 |
| 173 | Ga0495582_0048649 | 3300046473 | Bacteria | 2335 |
| 174 | Ga0495639_0029802 | 3300046475 | Bacteria | 2423 |
| 175 | Ga0495594_0018048 | 3300046499 | Bacteria | 3735 |
| 176 | Ga0495608_0000259 | 3300046511 | Bacteria | 38365 |
| 177 | Ga0495618_0002343 | 3300046514 | Bacteria | 12221 |
| 178 | Ga0495628_0010235 | 3300046516 | Bacteria | 7979 |
| 179 | Ga0495630_0025005 | 3300046517 | Bacteria | 4415 |
| 180 | Ga0495644_0000037 | 3300046523 | Bacteria | 64819 |
| 181 | Ga0495648_0003895 | 3300046524 | Bacteria | 12938 |
| 182 | Ga0495642_0007264 | 3300046528 | Bacteria | 4253 |
| 183 | Ga0495652_0006112 | 3300046529 | Bacteria | 11259 |
| 184 | Ga0495640_0002589 | 3300046533 | Bacteria | 14532 |
| 185 | Ga0495586_0105391 | 3300046535 | Bacteria | 1567 |
| 186 | Ga0495587_0002157 | 3300046536 | Bacteria | 13168 |
| 187 | Ga0495609_0014378 | 3300046538 | Bacteria | 3721 |
| 188 | Ga0495667_0000140 | 3300046559 | Bacteria | 49325 |
| 189 | Ga0495634_0012377 | 3300046642 | Bacteria | 6177 |
| 190 | Ga0495625_0014102 | 3300046660 | Bacteria | 6395 |
| 191 | Ga0495635_0006151 | 3300046663 | Bacteria | 8371 |
| 192 | Ga0495657_0034178 | 3300046675 | Bacteria | 3533 |
| 193 | Ga0495658_0015992 | 3300046683 | Bacteria | 3859 |
| 194 | Ga0495669_0001645 | 3300046684 | Bacteria | 9193 |
| 195 | Ga0495670_0027631 | 3300046691 | Bacteria | 2812 |
| 196 | Ga0495600_0002384 | 3300046809 | Bacteria | 10755 |
| 197 | Ga0495604_0000433 | 3300047317 | Bacteria | 37353 |
| 198 | Ga0495680_0012829 | 3300047322 | Bacteria | 7343 |
| 199 | Ga0495602_0001651 | 3300048088 | Bacteria | 22197 |
| 200 | Ga0496100_0078626 | 3300048903 | Bacteria | 2220 |
| 201 | Ga0496104_0126564 | 3300048907 | Bacteria | 2453 |
| 202 | Ga0496104_0222772 | 3300048907 | Bacteria | 1799 |
| 203 | Ga0496105_0008436 | 3300048908 | Bacteria | 8008 |
| 204 | Ga0496106_0026337 | 3300048909 | Bacteria | 4329 |
| 205 | Ga0496110_0111265 | 3300048913 | Bacteria | 2461 |
| 206 | Ga0496113_0035340 | 3300048916 | Bacteria | 3653 |
| 207 | Ga0496117_0000220 | 3300048920 | Bacteria | 109644 |
| 208 | Ga0496118_0000028 | 3300048921 | Bacteria | 366490 |
| 209 | Ga0496119_0001148 | 3300048922 | Bacteria | 33259 |
| 210 | Ga0496119_0008869 | 3300048922 | Bacteria | 8748 |
| 211 | Ga0496119_0016426 | 3300048922 | Bacteria | 5635 |
| 212 | Ga0496120_0000086 | 3300048923 | Bacteria | 154099 |
| 213 | Ga0496121_0022124 | 3300048924 | Bacteria | 6185 |
| 214 | Ga0496125_0004197 | 3300048928 | Bacteria | 16783 |
| 215 | Ga0496126_0012291 | 3300048929 | Bacteria | 8784 |
| 216 | Ga0496126_0048336 | 3300048929 | Bacteria | 3889 |
| 217 | nmdc:mga05p37_20123_c1 | 3300050507 | Bacteria | 8076 |
| 218 | nmdc:mga05p37_267727_c1 | 3300050507 | Bacteria | 2043 |
| 219 | nmdc:mga05p37_3215_c1 | 3300050507 | Bacteria | 19027 |
| 220 | nmdc:mga05p37_387826_c1 | 3300050507 | Bacteria | 1635 |
| 221 | nmdc:mga05p37_415949_c1 | 3300050507 | Unclassified | 1566 |
| 222 | nmdc:mga09592_64707_c1 | 3300050508 | Bacteria | 3096 |
| 223 | nmdc:mga06r32_43699_c1 | 3300050510 | Unclassified | 4265 |
| 224 | nmdc:mga0n895_99700_c1 | 3300050512 | Bacteria | 2913 |
| 225 | nmdc:mga0rr50_110032_c1 | 3300050513 | Bacteria | 2179 |
| 226 | nmdc:mga08x19_181391_c1 | 3300050514 | Bacteria | 1437 |
| 227 | nmdc:mga0a205_46012_c1 | 3300050515 | Bacteria | 4208 |
| 228 | nmdc:mga0a205_57844_c1 | 3300050515 | Unclassified | 3744 |
| 229 | nmdc:mga0a205_62738_c1 | 3300050515 | Bacteria | 3590 |
| 230 | nmdc:mga0sz30_1966_c1 | 3300050516 | Bacteria | 7351 |
| 231 | Ga0495601_0010542 | 3300053077 | Bacteria | 5503 |
| 232 | Ga0495612_0001790 | 3300053078 | Bacteria | 8803 |
| 233 | Ga0495595_0004908 | 3300053084 | Bacteria | 5395 |
| 234 | Ga0495619_0000779 | 3300053085 | Bacteria | 20872 |
| 235 | 2513674550 | 2513237098 | Bacteria | 9902361 |
| 236 | 2513894598 | 2513237141 | Bacteria | 8496279 |
| 237 | 2524463721 | 2524023210 | Bacteria | 9029266 |
| 238 | 2824624041 | 2824617872 | Bacteria | 8814715 |
| 239 | 2824632711 | 2824626560 | Bacteria | 8813858 |
| 240 | 2824639599 | 2824635225 | Bacteria | 8785348 |
| 241 | 2824648689 | 2824644064 | Bacteria | 8743947 |
| 242 | 2824670463 | 2824661429 | Bacteria | 9877870 |
| 243 | 2824728949 | 2824723954 | Bacteria | 8758240 |
| 244 | 2885383476 | 2885383462 | Bacteria | 9473874 |
| 245 | 2903769356 | 2903768456 | Bacteria | 9749579 |
| 246 | 2933582482 | 2933577622 | Bacteria | 9116884 |
| 247 | 2935694094 | 2935684952 | Bacteria | 9590419 |
| 248 | 2935722587 | 2935713505 | Bacteria | 9608509 |
| 249 | 2935731982 | 2935722832 | Bacteria | 9608746 |
| 250 | 2935741311 | 2935732158 | Bacteria | 9706831 |
| 251 | 2935750686 | 2935741537 | Bacteria | 9707219 |
| 252 | 2935760161 | 2935750917 | Bacteria | 9590372 |
| 253 | 2940565980 | 2940556831 | Bacteria | 9590747 |
| 254 | 8055745426 | 8055742211 | Bacteria | 9226248 |
| 255 | Ga0070698_100118573 | |||
| 256 | JGI25153J46596_10002386 | |||
| 257 | rootL2_10089891 | |||
| 258 | JGI25160J50197_1012310 | |||
| 259 | JGI25405J52794_10000156 | |||
| 260 | Ga0065707_10020874 | |||
| 261 | Ga0070690_100010935 | |||
| 262 | Ga0070670_100172276 | |||
| 263 | Ga0070680_100047813 | |||
| 264 | Ga0070660_100195256 | |||
| 265 | Ga0070689_100084448 | |||
| 266 | Ga0070692_10011052 | |||
| 267 | Ga0070659_100023480 | |||
| 268 | Ga0070714_100206171 | |||
| 269 | Ga0070713_100274594 | |||
| 270 | Ga0070711_100046746 | |||
| 271 | Ga0070711_100152976 | |||
| 272 | Ga0070708_100007219 | |||
| 273 | Ga0070708_100081855 | |||
| 274 | Ga0070708_100202123 | |||
| 275 | Ga0070663_100009376 | |||
| 276 | Ga0070706_100001452 | |||
| 277 | Ga0070706_100011768 | |||
| 278 | Ga0070706_100012195 | |||
| 279 | Ga0070706_100012701 | |||
| 280 | Ga0070706_100024996 | |||
| 281 | Ga0070706_100048179 | |||
| 282 | Ga0070706_100069143 | |||
| 283 | Ga0070706_100095129 | |||
| 284 | Ga0070707_100002945 | |||
| 285 | Ga0070707_100019031 | |||
| 286 | Ga0070707_100020309 | |||
| 287 | Ga0070707_100032756 | |||
| 288 | Ga0070707_100096995 | |||
| 289 | Ga0070698_100000705 | |||
| 290 | Ga0070698_100012919 | |||
| 291 | Ga0070698_100015423 | |||
| 292 | Ga0070699_100019176 | |||
| 293 | Ga0070699_100033715 | |||
| 294 | Ga0070699_100081103 | |||
| 295 | Ga0070699_100150678 | |||
| 296 | Ga0070684_100062358 | |||
| 297 | Ga0070697_100006590 | |||
| 298 | Ga0070697_100008029 | |||
| 299 | Ga0070697_100035645 | |||
| 300 | Ga0070697_100154265 | |||
| 301 | Ga0070697_100155765 | |||
| 302 | Ga0070695_100003754 | |||
| 303 | Ga0070693_100007292 | |||
| 304 | Ga0070665_100115126 | |||
| 305 | Ga0068855_100114405 | |||
| 306 | Ga0070664_100016062 | |||
| 307 | Ga0068856_100019227 | |||
| 308 | Ga0068859_100035066 | |||
| 309 | Ga0068864_100049737 | |||
| 310 | Ga0068861_100140374 | |||
| 311 | Ga0068863_100291293 | |||
| 312 | Ga0068860_100023478 | |||
| 313 | Ga0081455_10000501 | |||
| 314 | Ga0081455_10002992 | |||
| 315 | Ga0081540_1012135 | |||
| 316 | Ga0081540_1024466 | |||
| 317 | Ga0070717_10004056 | |||
| 318 | Ga0070717_10059800 | |||
| 319 | Ga0070717_10096868 | |||
| 320 | Ga0075365_10055140 | |||
| 321 | Ga0075369_10021781 | |||
| 322 | Ga0068871_100089318 | |||
| 323 | Ga0075428_100052403 | |||
| 324 | Ga0075433_10067540 | |||
| 325 | Ga0075434_100005399 | |||
| 326 | Ga0075434_100036621 | |||
| 327 | Ga0075434_100050020 | |||
| 328 | Ga0075434_100238707 | |||
| 329 | Ga0075436_100071977 | |||
| 330 | Ga0097620_100035064 | |||
| 331 | Ga0075435_100001980 | |||
| 332 | Ga0075435_100137497 | |||
| 333 | Ga0099794_10000444 | |||
| 334 | Ga0099794_10016750 | |||
| 335 | Ga0099794_10019251 | |||
| 336 | Ga0099794_10021801 | |||
| 337 | Ga0099794_10033390 | |||
| 338 | Ga0099794_10042103 | |||
| 339 | Ga0105240_10066797 | |||
| 340 | Ga0105245_10009871 | |||
| 341 | Ga0114129_10021650 | |||
| 342 | Ga0114129_10074195 | |||
| 343 | Ga0114129_10101138 | |||
| 344 | Ga0114129_10116098 | |||
| 345 | Ga0114129_10419281 | |||
| 346 | Ga0105242_10260595 | |||
| 347 | Ga0105249_10344997 | |||
| 348 | Ga0105246_10009543 | |||
| 349 | Ga0157373_10034682 | |||
| 350 | Ga0157374_10027471 | |||
| 351 | Ga0157374_10202619 | |||
| 352 | Ga0157378_10017852 | |||
| 353 | Ga0157378_10288558 | |||
| 354 | Ga0163162_10064871 | |||
| 355 | Ga0163162_10175070 | |||
| 356 | Ga0163162_10269696 | |||
| 357 | Ga0157375_10006416 | |||
| 358 | Ga0157380_10299595 | |||
| 359 | Ga0157376_10236229 | |||
| 360 | Ga0163161_10089734 | |||
| 361 | Ga0163161_10222634 | |||
| 362 | Ga0209758_1000082 | |||
| 363 | Ga0207426_1000944 | |||
| 364 | Ga0207692_10032978 | |||
| 365 | Ga0207699_10028764 | |||
| 366 | Ga0207684_10000126 | |||
| 367 | Ga0207684_10005021 | |||
| 368 | Ga0207684_10007564 | |||
| 369 | Ga0207684_10009285 | |||
| 370 | Ga0207684_10012798 | |||
| 371 | Ga0207684_10014259 | |||
| 372 | Ga0207684_10023619 | |||
| 373 | Ga0207684_10027854 | |||
| 374 | Ga0207684_10048734 | |||
| 375 | Ga0207684_10050936 | |||
| 376 | Ga0207684_10059338 | |||
| 377 | Ga0207684_10066039 | |||
| 378 | Ga0207684_10128455 | |||
| 379 | Ga0207684_10202767 | |||
| 380 | Ga0207695_10067885 | |||
| 381 | Ga0207693_10037748 | |||
| 382 | Ga0207693_10163840 | |||
| 383 | Ga0207660_10156232 | |||
| 384 | Ga0207646_10000020 | |||
| 385 | Ga0207646_10003500 | |||
| 386 | Ga0207646_10005202 | |||
| 387 | Ga0207646_10006903 | |||
| 388 | Ga0207646_10012239 | |||
| 389 | Ga0207646_10054079 | |||
| 390 | Ga0207700_10187532 | |||
| 391 | Ga0207664_10015023 | |||
| 392 | Ga0207690_10003110 | |||
| 393 | Ga0207706_10169854 | |||
| 394 | Ga0207686_10018480 | |||
| 395 | Ga0207665_10017394 | |||
| 396 | Ga0207665_10022239 | |||
| 397 | Ga0207665_10143408 | |||
| 398 | Ga0207689_10038735 | |||
| 399 | Ga0207668_10056843 | |||
| 400 | Ga0207641_10127197 | |||
| 401 | Ga0207675_100217536 | |||
| 402 | Ga0209588_1000116 | |||
| 403 | Ga0209588_1014791 | |||
| 404 | Ga0268264_10156002 | |||
| 405 | Ga0265314_10048336 | |||
| 406 | Ga0307416_100082171 | |||
| 407 | Ga0373943_0038046 | |||
| 408 | Ga0373935_0051047 | |||
| 409 | Ga0373927_0005065 | |||
| 410 | Ga0373927_0012938 | |||
| 411 | Ga0373927_0027626 | |||
| 412 | Ga0373933_0001780 | |||
| 413 | Ga0373947_0016724 | |||
| 414 | Ga0373937_0000602 | |||
| 415 | Ga0373925_0153292 | |||
| 416 | Ga0395898_0228657 | |||
| 417 | Ga0395905_0025308 | |||
| 418 | Ga0395905_0082919 | |||
| 419 | Ga0436360_0665754 | |||
| 420 | Ga0436360_0951768 | |||
| 421 | Ga0436361_0244495 | |||
| 422 | Ga0451577_0128058 | |||
| 423 | Ga0453683_0000812 | |||
| 424 | Ga0495603_0000422 | |||
| 425 | Ga0495651_0000757 | |||
| 426 | Ga0495653_0028462 | |||
| 427 | Ga0495582_0048649 | |||
| 428 | Ga0495639_0029802 | |||
| 429 | Ga0495594_0018048 | |||
| 430 | Ga0495608_0000259 | |||
| 431 | Ga0495618_0002343 | |||
| 432 | Ga0495628_0010235 | |||
| 433 | Ga0495630_0025005 | |||
| 434 | Ga0495644_0000037 | |||
| 435 | Ga0495648_0003895 | |||
| 436 | Ga0495642_0007264 | |||
| 437 | Ga0495652_0006112 | |||
| 438 | Ga0495640_0002589 | |||
| 439 | Ga0495586_0105391 | |||
| 440 | Ga0495587_0002157 | |||
| 441 | Ga0495609_0014378 | |||
| 442 | Ga0495667_0000140 | |||
| 443 | Ga0495634_0012377 | |||
| 444 | Ga0495625_0014102 | |||
| 445 | Ga0495635_0006151 | |||
| 446 | Ga0495657_0034178 | |||
| 447 | Ga0495658_0015992 | |||
| 448 | Ga0495669_0001645 | |||
| 449 | Ga0495670_0027631 | |||
| 450 | Ga0495600_0002384 | |||
| 451 | Ga0495604_0000433 | |||
| 452 | Ga0495680_0012829 | |||
| 453 | Ga0495602_0001651 | |||
| 454 | Ga0496100_0078626 | |||
| 455 | Ga0496104_0126564 | |||
| 456 | Ga0496104_0222772 | |||
| 457 | Ga0496105_0008436 | |||
| 458 | Ga0496106_0026337 | |||
| 459 | Ga0496110_0111265 | |||
| 460 | Ga0496113_0035340 | |||
| 461 | Ga0496117_0000220 | |||
| 462 | Ga0496118_0000028 | |||
| 463 | Ga0496119_0001148 | |||
| 464 | Ga0496119_0008869 | |||
| 465 | Ga0496119_0016426 | |||
| 466 | Ga0496120_0000086 | |||
| 467 | Ga0496121_0022124 | |||
| 468 | Ga0496125_0004197 | |||
| 469 | Ga0496126_0012291 | |||
| 470 | Ga0496126_0048336 | |||
| 471 | nmdc:mga05p37_20123_c1 | |||
| 472 | nmdc:mga05p37_267727_c1 | |||
| 473 | nmdc:mga05p37_3215_c1 | |||
| 474 | nmdc:mga05p37_387826_c1 | |||
| 475 | nmdc:mga05p37_415949_c1 | |||
| 476 | nmdc:mga09592_64707_c1 | |||
| 477 | nmdc:mga06r32_43699_c1 | |||
| 478 | nmdc:mga0n895_99700_c1 | |||
| 479 | nmdc:mga0rr50_110032_c1 | |||
| 480 | nmdc:mga08x19_181391_c1 | |||
| 481 | nmdc:mga0a205_46012_c1 | |||
| 482 | nmdc:mga0a205_57844_c1 | |||
| 483 | nmdc:mga0a205_62738_c1 | |||
| 484 | nmdc:mga0sz30_1966_c1 | |||
| 485 | Ga0495601_0010542 | |||
| 486 | Ga0495612_0001790 | |||
| 487 | Ga0495595_0004908 | |||
| 488 | Ga0495619_0000779 | |||
| 489 | 2513674550 | |||
| 490 | 2513894598 | |||
| 491 | 2524463721 | |||
| 492 | 2824624041 | |||
| 493 | 2824632711 | |||
| 494 | 2824639599 | |||
| 495 | 2824648689 | |||
| 496 | 2824670463 | |||
| 497 | 2824728949 | |||
| 498 | 2885383476 | |||
| 499 | 2903769356 | |||
| 500 | 2933582482 | |||
| 501 | 2935694094 | |||
| 502 | 2935722587 | |||
| 503 | 2935731982 | |||
| 504 | 2935741311 | |||
| 505 | 2935750686 | |||
| 506 | 2935760161 | |||
| 507 | 2940565980 | |||
| 508 | 8055745426 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4aam-assembly1.cif.gz_A | maca wild-type mixed-valence | 0.7386 | 77 | 396 |
| 3o5c-assembly2.cif.gz_D | cytochrome c peroxidase bccp of shewanella oneidensis | 0.7358 | 73 | 395 |
| 1iqc-assembly2.cif.gz_D | crystal structure of di-heme peroxidase from nitrosomonas europaea | 0.7324 | 73 | 395 |
| 3o5c-assembly2.cif.gz_C | cytochrome c peroxidase bccp of shewanella oneidensis | 0.7315 | 73 | 395 |
| 6fu3-assembly1.cif.gz_B | structure of the mixed-valence, active form, of cytochrome c peroxidase from obligate human pathogenic bacterium neisseria gonorrhoeae | 0.6898 | 66 | 395 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 6fu3B02 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8804 | 80 | 214 | 1.10.760.10 |
| 4aanA02 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8577 | 78 | 214 | 1.10.760.10 |
| 3o5cD02 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8538 | 83 | 233 | 1.10.760.10 |
| 3sleA01 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8285 | 82 | 214 | 1.10.760.10 |
| 3o5cD02 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8283 | 83 | 233 | 1.10.760.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A5L5Q4-F1-model_v4 | Cytochrome c peroxidase | 0.8887 | 80 | 244 |
GO:0004130
GO:0009055 GO:0020037 |
| AF-A0A353FD04-F1-model_v4 | Cytochrome c domain-containing protein | 0.8852 | 80 | 224 |
GO:0004130
GO:0009055 GO:0020037 GO:0046872 |
| AF-A0A7Y3A6B5-F1-model_v4 | Cytochrome-c peroxidase | 0.8822 | 80 | 245 |
GO:0004130
GO:0009055 GO:0020037 |
| AF-A0A350C7D9-F1-model_v4 | Cytochrome-c peroxidase | 0.8815 | 80 | 245 |
GO:0004130
GO:0009055 GO:0020037 |
| AF-A0A7C2PIT3-F1-model_v4 | Cytochrome-c peroxidase | 0.8805 | 73 | 244 |
GO:0004130
GO:0009055 GO:0020037 GO:0046872 |