F364486

General Info

Members Datasets Scaffolds Average Seq Length
253 177 222 747

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221652|2644294966
Length 834
Sequence QPGAPASSAVHPSDCVADPLPPQRVELLDDPQEWLAFGRPCTPAGSPLPGGATDPATADGAATAWDSHVVLEGMHCAACALMIEDALRAVPGVLQADVSAATRRARVVWQPGRVLPSQWMEAVRHAGYRAMPAMDAFARDQRLRESRRALWRWLVAGFCMMQVMMYAWPAYVAQPGDLSGEMEQLLRWASWVITLPMVVFSCGPFFTSALRDIRLLRVSMDLPVALGMAITFVVSTAGTFDPAGIFGKEVYYDSLTMFVFFLLTGRWLELRLRDRTAGALEAVMNRLPDGVERRAADGSFTRVATRRIVVGDTIRVLPGEAFPADGRITAGSTYADEALLTGESTPVARPVGSAVTAGSYNLQAPVEVLVEGTGGQTRFAQIVALMESASLQKPRLAQLADRIARPFLVAVLLAAALAVAYWWPSDPGHALMVGVAVLIVTCPCALSLATPVAMLTAAGTLARHGVLVRNLQGLEALAQVDTMVFDKTGTLTRDGMALQAVHPAGSCSAEEALDLAAALARQSMHPASRALAAAASVQQLPVGRWKVKGLQEDAGQGLTATVEDATGAVAARTIRLGSARHAGVANDAAGAALQVVLSEQAADGALNELARFDLVEDLRAEASAVVQTLQQDGVAVQLLSGDRRGAVERVATQAGIAQAEGECTPQGKLAALQALQSQGHHVAMVGDGLNDGPVLAGAHVSFAFGRAVPLAQSRADFVVLGDSLVLVPQTVLLARRTLRVVRQNLWWAAAYNALCVPLAVLGWMPAWLAGLGMALSSLLVVLNAARLARDLPSLSGSHSSAPLPTVALPARPDPMAGSAPQPPLDLSKNPLELV

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
3 2547132374 Acidovorax radicis N35 Isolate Unclassified
4 2643221570 Acidovorax sp. Root568 Isolate Unclassified
5 2643221596 Acidovorax sp. Root70 Isolate Unclassified
6 2643221609 Acidovorax sp. Root217 Isolate Unclassified
7 2643221611 Acidovorax sp. Root219 Isolate Unclassified
8 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
9 2643221652 Acidovorax sp. Root402 Isolate Unclassified
10 2643221683 Variovorax sp. Root473 Isolate Unclassified
11 2643221717 Acidovorax sp. Root267 Isolate Unclassified
12 2721755523 Delftia sp. HK171 Isolate Unclassified
13 2738541277 Variovorax sp. GV051 Isolate Unclassified
14 2738543012 Acidovorax sp. CF301 Isolate Unclassified
15 2738543013 Variovorax sp. BT01 Isolate Unclassified
16 2738543019 Variovorax sp. GV040 Isolate Unclassified
17 2816332133 Acidovorax radicis 2721A Isolate Unclassified
18 2842677519 Variovorax sp. R-72495 Isolate Unclassified
19 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
20 2842733646 Variovorax sp. R-72446 Isolate Unclassified
21 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
22 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
23 2904456579 Variovorax sp. 2002 Isolate Unclassified
24 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
25 2928070936 Variovorax gossypii 1167 Isolate Unclassified
26 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
27 2929520902 Variovorax beijingensis 502 Isolate Unclassified
28 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
29 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
30 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
31 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
32 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
33 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
34 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
35 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
36 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
37 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
38 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
39 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
40 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
41 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
42 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
43 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
44 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
45 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
46 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
47 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
48 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
49 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
50 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
51 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
52 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
53 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
54 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
55 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
56 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
60 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
61 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
69 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
70 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
73 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
74 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
75 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
76 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
77 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
78 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
89 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
101 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
105 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
106 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
107 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
108 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
109 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
116 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
117 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
124 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
125 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
126 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
127 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
128 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
129 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
130 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
136 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
137 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
138 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
139 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
147 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
148 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
162 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
163 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
167 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
168 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
169 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
170 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
171 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
172 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
173 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
176 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
177 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.75
Metatranscriptomes 0
Isolates 12.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 38.34
Nodule 1.58
Rhizoplane 3.16
Rhizosphere 38.34
Stem 0
Stem Tuber 0
Unclassified 18.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000036 3300002704 Bacteria 97790
2 JGI25156J39149_1000047 3300002705 Bacteria 97697
3 JGI25154J39366_1000068 3300002738 Bacteria 97697
4 JGI25157J39369_1000066 3300002741 Bacteria 97697
5 JGI25152J39213_1000940 3300002773 Bacteria 14283
6 JGI25159J45721_1002111 3300002987 Bacteria 7804
7 JGI25151J46595_10001171 3300003187 Bacteria 18873
8 JGI25151J46595_10001722 3300003187 Bacteria 14283
9 JGI25153J46596_10001428 3300003215 Bacteria 14283
10 JGI25153J46596_10005862 3300003215 Bacteria 6361
11 rootL2_10020933 3300003322 Bacteria 3290
12 JGI25160J50197_1000331 3300003354 Bacteria 32173
13 JGI25160J50197_1000446 3300003354 Bacteria 25789
14 JGI25160J50197_1000968 3300003354 Bacteria 14991
15 JGI25161J50226_1000064 3300003374 Bacteria 99448
16 Ga0055537_1000043 3300003773 Bacteria 90816
17 Ga0055537_1000046 3300003773 Bacteria 88251
18 Ga0055537_1000068 3300003773 Bacteria 75642
19 Ga0055537_1000870 3300003773 Bacteria 14482
20 Ga0055524_1000012 3300003775 Bacteria 260384
21 Ga0055536_1003568 3300003781 Bacteria 8317
22 Ga0055534_1000080 3300003784 Bacteria 75642
23 Ga0055534_1004136 3300003784 Bacteria 4308
24 Ga0055528_1000159 3300003790 Bacteria 56331
25 Ga0055528_1001310 3300003790 Bacteria 15602
26 Ga0055530_10000015 3300003791 Bacteria 148790
27 Ga0055530_10006082 3300003791 Bacteria 5506
28 Ga0055540_1000039 3300003792 Bacteria 161844
29 Ga0055540_1000370 3300003792 Bacteria 37920
30 Ga0055540_1002351 3300003792 Bacteria 10121
31 Ga0055531_10002223 3300003794 Bacteria 13170
32 Ga0055531_10002942 3300003794 Bacteria 11083
33 Ga0055543_1000284 3300004625 Bacteria 36825
34 Ga0055543_1000876 3300004625 Bacteria 14398
35 Ga0065165_1002686 3300005262 Bacteria 14321
36 Ga0065165_1009425 3300005262 Bacteria 4379
37 Ga0070667_100005809 3300005367 Bacteria 10296
38 Ga0070662_100015991 3300005457 Bacteria 5034
39 Ga0070664_100032942 3300005564 Bacteria 4336
40 Ga0075364_10003158 3300006051 Bacteria 9324
41 Ga0075366_10000868 3300006195 Bacteria 14584
42 Ga0075366_10008999 3300006195 Bacteria 5569
43 Ga0075370_10003580 3300006353 Bacteria 7427
44 Ga0079104_1000034 3300006946 Bacteria 199368
45 Ga0099826_10000158 3300006948 Bacteria 28172
46 Ga0105244_10000730 3300009036 Bacteria 28251
47 Ga0105240_10032761 3300009093 Bacteria 6724
48 Ga0105243_10000392 3300009148 Bacteria 46166
49 Ga0105243_10002832 3300009148 Bacteria 14397
50 Ga0105243_10006138 3300009148 Bacteria 9293
51 Ga0105243_10027020 3300009148 Bacteria 4395
52 Ga0105239_10069266 3300010375 Bacteria 3876
53 Ga0157373_10029922 3300013100 Bacteria 3921
54 Ga0157373_10035080 3300013100 Bacteria 3603
55 Ga0157369_10005435 3300013105 Bacteria 14814
56 Ga0182008_10000625 3300014497 Bacteria 25949
57 Ga0182008_10002974 3300014497 Bacteria 10432
58 Ga0182008_10005901 3300014497 Bacteria 6919
59 Ga0182008_10013842 3300014497 Bacteria 4237
60 Ga0182006_1000910 3300015261 Bacteria 19716
61 Ga0182007_10003184 3300015262 Bacteria 7848
62 Ga0183362_10001 3300015683 Bacteria 2046624
63 Ga0163161_10000441 3300017792 Bacteria 34632
64 Ga0163161_10005579 3300017792 Bacteria 8723
65 Ga0209435_100001 3300025206 Bacteria 1424171
66 Ga0207425_1000440 3300025245 Bacteria 27322
67 Ga0209646_1000001 3300025246 Bacteria 3092932
68 Ga0209026_1000003 3300025250 Bacteria 1060571
69 Ga0209759_1000001 3300025256 Bacteria 2799452
70 Ga0209129_1000325 3300025258 Bacteria 42074
71 Ga0209129_1001419 3300025258 Bacteria 13384
72 Ga0209129_1005602 3300025258 Bacteria 4370
73 Ga0209565_1000004 3300025263 Bacteria 983150
74 Ga0209565_1000027 3300025263 Bacteria 360545
75 Ga0209565_1000073 3300025263 Bacteria 164695
76 Ga0209565_1001352 3300025263 Bacteria 11094
77 Ga0209673_1000031 3300025273 Bacteria 347560
78 Ga0209673_1000127 3300025273 Bacteria 164695
79 Ga0209673_1000221 3300025273 Bacteria 112739
80 Ga0209673_1008518 3300025273 Bacteria 4556
81 Ga0209130_1000025 3300025284 Bacteria 336491
82 Ga0209130_1000094 3300025284 Bacteria 145569
83 Ga0209675_1000029 3300025291 Bacteria 281053
84 Ga0209675_1000061 3300025291 Bacteria 181096
85 Ga0209675_1000157 3300025291 Bacteria 88700
86 Ga0209675_1001673 3300025291 Bacteria 12341
87 Ga0209676_1000005 3300025292 Bacteria 1076001
88 Ga0209676_1000007 3300025292 Bacteria 1029371
89 Ga0209676_1000098 3300025292 Bacteria 234305
90 Ga0209025_1000104 3300025294 Bacteria 226895
91 Ga0209025_1000977 3300025294 Bacteria 42782
92 Ga0209025_1006691 3300025294 Bacteria 8847
93 Ga0209025_1014168 3300025294 Bacteria 4937
94 Ga0209564_1000040 3300025295 Bacteria 411388
95 Ga0209564_1000681 3300025295 Bacteria 50123
96 Ga0209564_1002295 3300025295 Bacteria 15586
97 Ga0209758_1000050 3300025297 Bacteria 345008
98 Ga0209758_1006121 3300025297 Bacteria 8820
99 Ga0209050_1000003 3300025298 Bacteria 1609245
100 Ga0209050_1000007 3300025298 Bacteria 1187891
101 Ga0209256_1000001 3300025299 Bacteria 2166974
102 Ga0209256_1000023 3300025299 Bacteria 461150
103 Ga0207426_1000025 3300025302 Bacteria 532921
104 Ga0207426_1000202 3300025302 Bacteria 143712
105 Ga0207426_1003081 3300025302 Bacteria 9553
106 Ga0209051_1000003 3300025303 Bacteria 1609245
107 Ga0209051_1000036 3300025303 Bacteria 339863
108 Ga0209051_1000098 3300025303 Bacteria 165284
109 Ga0209051_1000298 3300025303 Bacteria 78777
110 Ga0209051_1006413 3300025303 Bacteria 6630
111 Ga0209257_1000011 3300025304 Bacteria 1112630
112 Ga0209257_1000018 3300025304 Bacteria 836016
113 Ga0209257_1003238 3300025304 Bacteria 14321
114 Ga0207655_1001409 3300025728 Bacteria 22356
115 Ga0207706_10011593 3300025933 Bacteria 8030
116 Ga0207709_10000019 3300025935 Bacteria 402225
117 Ga0207709_10000130 3300025935 Bacteria 110843
118 Ga0207709_10002008 3300025935 Bacteria 13202
119 Ga0207709_10013377 3300025935 Bacteria 4527
120 Ga0207691_10042718 3300025940 Bacteria 4178
121 Ga0207679_10019883 3300025945 Bacteria 4523
122 Ga0207667_10019879 3300025949 Bacteria 7482
123 Ga0207651_10037824 3300025960 Bacteria 3165
124 Ga0207658_10009556 3300025986 Bacteria 6582
125 Ga0207648_10043586 3300026089 Bacteria 3938
126 Ga0209281_1000005 3300027111 Bacteria 1242284
127 Ga0209970_1000733 3300027614 Bacteria 5680
128 Ga0209974_10001315 3300027876 Bacteria 8931
129 Ga0307515_10000736 3300028794 Bacteria 75689
130 Ga0307515_10001095 3300028794 Bacteria 62092
131 Ga0307515_10066511 3300028794 Bacteria 4992
132 Ga0316177_1178318 3300030731 Bacteria 2645
133 Ga0314311_1027294 3300030733 Bacteria 14166
134 Ga0316180_1073198 3300030736 Bacteria 3874
135 Ga0265330_10000032 3300031235 Bacteria 130592
136 Ga0265332_10000001 3300031238 Bacteria 863783
137 Ga0265332_10000003 3300031238 Bacteria 482849
138 Ga0265328_10000027 3300031239 Bacteria 114609
139 Ga0265325_10003737 3300031241 Bacteria 9830
140 Ga0265331_10000851 3300031250 Bacteria 24815
141 Ga0265327_10000307 3300031251 Bacteria 95145
142 Ga0265327_10001075 3300031251 Bacteria 38065
143 Ga0307513_10005965 3300031456 Bacteria 15987
144 Ga0307408_100001814 3300031548 Bacteria 15559
145 Ga0307408_100054177 3300031548 Bacteria 2899
146 Ga0307514_10000528 3300031649 Bacteria 74778
147 Ga0307514_10054081 3300031649 Bacteria 3095
148 Ga0265314_10000022 3300031711 Bacteria 297299
149 Ga0307405_10038944 3300031731 Bacteria 2869
150 Ga0307406_10001092 3300031901 Bacteria 15102
151 Ga0307406_10015267 3300031901 Bacteria 4440
152 Ga0307416_100024837 3300032002 Bacteria 4382
153 Ga0395900_0019249 3300037418 Bacteria 6960
154 Ga0395898_0036701 3300037466 Bacteria 4865
155 Ga0395901_0113987 3300038443 Bacteria 2839
156 Ga0439466_0001768 3300041411 Bacteria 8448
157 Ga0439466_0007207 3300041411 Bacteria 4208
158 Ga0439442_005650 3300042002 Bacteria 2503
159 Ga0439445_0000625 3300042004 Bacteria 7280
160 Ga0439445_0002478 3300042004 Bacteria 4113
161 Ga0439432_008067 3300042006 Bacteria 3709
162 Ga0439452_002959 3300042010 Bacteria 6049
163 Ga0439462_0000866 3300042015 Bacteria 6353
164 Ga0450911_000110 3300042115 Bacteria 33959
165 Ga0439434_0000355 3300042435 Bacteria 13126
166 Ga0439434_0008665 3300042435 Bacteria 2988
167 Ga0451577_0000728 3300042876 Bacteria 51004
168 Ga0453683_0001936 3300044673 Bacteria 16847
169 Ga0453684_0000121 3300044712 Bacteria 341067
170 Ga0453684_0075135 3300044712 Bacteria 4249
171 Ga0451576_0003962 3300045051 Bacteria 19723
172 Ga0451576_0010625 3300045051 Bacteria 10544
173 Ga0495627_014357 3300046453 Bacteria 2765
174 Ga0495639_0026748 3300046475 Bacteria 2551
175 Ga0495637_0016532 3300046520 Bacteria 3448
176 Ga0495642_0009099 3300046528 Bacteria 3801
177 Ga0495597_0002478 3300046542 Bacteria 11652
178 Ga0495668_0018436 3300046616 Bacteria 4033
179 Ga0495625_0000301 3300046660 Bacteria 76108
180 Ga0495625_0061766 3300046660 Bacteria 2650
181 Ga0495588_0014105 3300046674 Bacteria 3820
182 Ga0495658_0002021 3300046683 Bacteria 10319
183 Ga0495671_0002197 3300046692 Bacteria 12422
184 Ga0495676_0001586 3300047321 Bacteria 19725
185 Ga0495593_0009621 3300047673 Bacteria 5610
186 Ga0495614_0000554 3300048089 Bacteria 15475
187 Ga0496100_0033179 3300048903 Bacteria 3228
188 Ga0496101_0002818 3300048904 Bacteria 10685
189 Ga0496102_0012048 3300048905 Bacteria 7473
190 Ga0496103_0015125 3300048906 Bacteria 4587
191 Ga0496104_0004837 3300048907 Bacteria 11739
192 Ga0496105_0008982 3300048908 Bacteria 7796
193 Ga0496106_0008519 3300048909 Bacteria 7584
194 Ga0496110_0010548 3300048913 Bacteria 7522
195 Ga0496116_0035800 3300048919 Bacteria 3483
196 Ga0496118_0019623 3300048921 Bacteria 6034
197 Ga0496121_0002061 3300048924 Bacteria 31811
198 Ga0496122_0005495 3300048925 Bacteria 15080
199 Ga0496122_0024103 3300048925 Bacteria 5335
200 Ga0496123_0001126 3300048926 Bacteria 39890
201 Ga0496125_0002287 3300048928 Bacteria 25337
202 Ga0496125_0003783 3300048928 Bacteria 17994
203 Ga0496125_0015362 3300048928 Bacteria 7411
204 Ga0496125_0048069 3300048928 Bacteria 3561
205 Ga0501031_0001710 3300049568 Bacteria 13785
206 nmdc:mga03683_1615_c1 3300050489 Bacteria 6754
207 nmdc:mga0k408_26053_c1 3300050493 Bacteria 3314
208 nmdc:mga07m45_18163_c1 3300050496 Bacteria 3790
209 nmdc:mga07m45_2775_c1 3300050496 Bacteria 8275
210 Ga0500610_0000205 3300053079 Bacteria 18114
211 Ga0500610_0002029 3300053079 Bacteria 7257
212 Ga0500562_006310 3300053108 Bacteria 2989
213 Ga0500571_000523 3300053110 Bacteria 15774
214 Ga0500593_010981 3300053117 Bacteria 3813
215 Ga0500607_002118 3300053121 Bacteria 16516
216 Ga0500608_004721 3300053122 Bacteria 5309
217 Ga0500658_0000018 3300053134 Bacteria 141217
218 Ga0500559_0004366 3300053136 Bacteria 6739
219 Ga0500568_0005015 3300053139 Bacteria 6937
220 Ga0500627_0000384 3300053158 Bacteria 11946
221 Ga0500636_0028727 3300053177 Bacteria 3284
222 Ga0500645_000155 3300053730 Bacteria 53212

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300042002 Ga0439442_005650 Ga0439442_005650_11_2044 603
2 3300046528 Ga0495642_0009099 Ga0495642_0009099_1023_3452 629
3 3300006195 Ga0075366_10000868 Ga0075366_100008686 651
4 3300049568 Ga0501031_0001710 Ga0501031_0001710_5178_7406 652
5 3300044712 Ga0453684_0075135 Ga0453684_0075135_1077_3347 653
6 3300003322 rootL2_10020933 rootL2_100209333 654
7 3300048913 Ga0496110_0010548 Ga0496110_0010548_5033_7342 655
8 3300053108 Ga0500562_006310 Ga0500562_006310_624_2903 657
9 3300042004 Ga0439445_0002478 Ga0439445_0002478_141_2489 658
10 3300042115 Ga0450911_000110 Ga0450911_000110_23565_25913 658
11 3300048928 Ga0496125_0015362 Ga0496125_0015362_297_2645 658
12 3300045051 Ga0451576_0003962 Ga0451576_0003962_16187_18457 659
13 3300025960 Ga0207651_10037824 Ga0207651_100378242 660
14 3300006051 Ga0075364_10003158 Ga0075364_100031583 665
15 3300031250 Ga0265331_10000851 Ga0265331_1000085115 666
16 3300031251 Ga0265327_10000307 Ga0265327_1000030765 666
17 3300037418 Ga0395900_0019249 Ga0395900_0019249_642_2858 666
18 3300037466 Ga0395898_0036701 Ga0395898_0036701_2186_4402 666
19 3300038443 Ga0395901_0113987 Ga0395901_0113987_446_2662 666
20 3300048925 Ga0496122_0005495 Ga0496122_0005495_11847_14213 667
21 3300048926 Ga0496123_0001126 Ga0496123_0001126_36190_38556 667
22 3300031901 Ga0307406_10015267 Ga0307406_100152673 668
23 3300046475 Ga0495639_0026748 Ga0495639_0026748_77_2383 668
24 3300046674 Ga0495588_0014105 Ga0495588_0014105_658_2964 668
25 3300005367 Ga0070667_100005809 Ga0070667_10000580911 669
26 3300025986 Ga0207658_10009556 Ga0207658_100095567 669
27 3300031238 Ga0265332_10000003 Ga0265332_10000003250 669
28 3300048903 Ga0496100_0033179 Ga0496100_0033179_298_2607 669
29 3300048905 Ga0496102_0012048 Ga0496102_0012048_701_3010 669
30 3300048906 Ga0496103_0015125 Ga0496103_0015125_1335_3644 669
31 3300048907 Ga0496104_0004837 Ga0496104_0004837_1280_3589 669
32 3300048908 Ga0496105_0008982 Ga0496105_0008982_4471_6780 669
33 3300048909 Ga0496106_0008519 Ga0496106_0008519_4026_6335 669
34 3300025940 Ga0207691_10042718 Ga0207691_100427183 670
35 3300046542 Ga0495597_0002478 Ga0495597_0002478_8066_10597 670
36 3300048928 Ga0496125_0003783 Ga0496125_0003783_14552_16915 670
37 iso_pu_bacteria 2547132374 2548498324 670
38 iso_pu_bacteria 2643221628 2644159703 670
39 iso_pu_bacteria 2643221717 2644648863 670
40 3300028794 Ga0307515_10000736 Ga0307515_1000073652 671
41 3300027614 Ga0209970_1000733 Ga0209970_10007332 672
42 3300030731 Ga0316177_1178318 Ga0316177_11783181 672
43 3300042876 Ga0451577_0000728 Ga0451577_0000728_47672_49942 673
44 3300044712 Ga0453684_0000121 Ga0453684_0000121_304353_306623 673
45 3300006353 Ga0075370_10003580 Ga0075370_100035803 674
46 3300025273 Ga0209673_1008518 Ga0209673_10085184 674
47 3300006195 Ga0075366_10008999 Ga0075366_100089994 675
48 3300028794 Ga0307515_10066511 Ga0307515_100665113 675
49 3300031239 Ga0265328_10000027 Ga0265328_1000002730 675
50 3300050493 nmdc:mga0k408_26053_c1 nmdc:mga0k408_26053_c1_921_3218 675
51 3300050496 nmdc:mga07m45_18163_c1 nmdc:mga07m45_18163_c1_357_2654 675
52 3300026089 Ga0207648_10043586 Ga0207648_100435863 676
53 3300031649 Ga0307514_10054081 Ga0307514_100540813 676
54 3300042015 Ga0439462_0000866 Ga0439462_0000866_2835_5165 676
55 3300041411 Ga0439466_0001768 Ga0439466_0001768_4781_7111 677
56 3300042004 Ga0439445_0000625 Ga0439445_0000625_861_3191 677
57 3300042010 Ga0439452_002959 Ga0439452_002959_3022_5352 677
58 3300042435 Ga0439434_0000355 Ga0439434_0000355_10053_12383 677
59 iso_pu_bacteria 2842677519 2842678552 677
60 3300006946 Ga0079104_1000034 Ga0079104_1000034167 678
61 3300009148 Ga0105243_10006138 Ga0105243_100061389 678
62 3300025935 Ga0207709_10000019 Ga0207709_1000001936 678
63 3300027111 Ga0209281_1000005 Ga0209281_1000005165 678
64 iso_pu_bacteria 2721755523 2722884587 678
65 iso_pu_bacteria 2842718218 2842720259 678
66 3300017792 Ga0163161_10000441 Ga0163161_100004417 679
67 3300025303 Ga0209051_1000298 Ga0209051_100029853 679
68 3300030733 Ga0314311_1027294 Ga0314311_102729410 679
69 3300030736 Ga0316180_1073198 Ga0316180_10731983 679
70 3300031251 Ga0265327_10001075 Ga0265327_1000107518 679
71 iso_pu_bacteria 2738543013 2739249079 679
72 3300003773 Ga0055537_1000068 Ga0055537_100006844 680
73 3300003784 Ga0055534_1000080 Ga0055534_100008044 680
74 3300003790 Ga0055528_1000159 Ga0055528_100015931 680
75 3300006948 Ga0099826_10000158 Ga0099826_1000015826 680
76 3300025263 Ga0209565_1000073 Ga0209565_1000073131 680
77 3300025273 Ga0209673_1000127 Ga0209673_100012736 680
78 3300025291 Ga0209675_1000029 Ga0209675_100002936 680
79 3300048925 Ga0496122_0024103 Ga0496122_0024103_1837_4281 680
80 3300048928 Ga0496125_0002287 Ga0496125_0002287_21976_24420 680
81 3300046660 Ga0495625_0000301 Ga0495625_0000301_42244_44565 682
82 iso_pu_bacteria 2643221570 2643867598 682
83 iso_pu_bacteria 2643221596 2643990519 682
84 iso_pu_bacteria 2643221652 2644294966 682
85 iso_pu_bacteria 2842733646 2842735527 682
86 iso_pu_bacteria 2894023352 2894026640 682
87 iso_pu_bacteria 2990710928 2990713087 682
88 iso_pu_bacteria 2954767861 2954772195 683
89 3300017792 Ga0163161_10005579 Ga0163161_100055793 684
90 iso_pu_bacteria 2513020051 2513228569 684
91 iso_pu_bacteria 2643221683 2644464795 684
92 3300009093 Ga0105240_10032761 Ga0105240_100327613 685
93 3300010375 Ga0105239_10069266 Ga0105239_100692662 685
94 3300013100 Ga0157373_10029922 Ga0157373_100299223 685
95 3300013105 Ga0157369_10005435 Ga0157369_1000543516 685
96 3300025949 Ga0207667_10019879 Ga0207667_100198793 685
97 3300031548 Ga0307408_100001814 Ga0307408_10000181413 685
98 3300031901 Ga0307406_10001092 Ga0307406_1000109213 685
99 3300048924 Ga0496121_0002061 Ga0496121_0002061_28551_30887 685
100 3300048928 Ga0496125_0048069 Ga0496125_0048069_230_2566 685
101 iso_pu_bacteria 2643221609 2644062907 685
102 iso_pu_bacteria 2643221611 2644070590 685
103 iso_pu_bacteria 2904449895 2904454287 685
104 iso_pu_bacteria 2904456579 2904462717 685
105 iso_pu_bacteria 2928070936 2928073388 685
106 iso_pu_bacteria 2928115317 2928116232 685
107 3300025294 Ga0209025_1014168 Ga0209025_10141683 686
108 3300027876 Ga0209974_10001315 Ga0209974_100013158 686
109 3300046453 Ga0495627_014357 Ga0495627_014357_211_2529 686
110 3300046692 Ga0495671_0002197 Ga0495671_0002197_9735_12053 686
111 3300053121 Ga0500607_002118 Ga0500607_002118_1133_3451 686
112 3300053122 Ga0500608_004721 Ga0500608_004721_1037_3346 686
113 iso_pu_bacteria 2738543012 2739243778 686
114 iso_pu_bacteria 2816332133 2816472618 686
115 iso_pu_bacteria 2929520902 2929527165 686
116 iso_pu_bacteria 2974320154 2974322762 686
117 3300053079 Ga0500610_0000205 Ga0500610_0000205_291_2612 687
118 iso_pu_bacteria 2738541277 2738722277 687
119 iso_pu_bacteria 2738543019 2739282641 687
120 iso_pu_bacteria 2919462493 2919465033 687
121 iso_pu_bacteria 2939631187 2939636510 687
122 3300002773 JGI25152J39213_1000940 JGI25152J39213_10009403 688
123 3300003187 JGI25151J46595_10001171 JGI25151J46595_100011713 688
124 3300003187 JGI25151J46595_10001722 JGI25151J46595_100017223 688
125 3300003215 JGI25153J46596_10001428 JGI25153J46596_1000142810 688
126 3300003215 JGI25153J46596_10005862 JGI25153J46596_100058623 688
127 3300003354 JGI25160J50197_1000968 JGI25160J50197_10009684 688
128 3300003773 Ga0055537_1000870 Ga0055537_10008703 688
129 3300003781 Ga0055536_1003568 Ga0055536_10035685 688
130 3300003791 Ga0055530_10006082 Ga0055530_100060823 688
131 3300003792 Ga0055540_1000370 Ga0055540_10003703 688
132 3300003792 Ga0055540_1002351 Ga0055540_10023518 688
133 3300003794 Ga0055531_10002223 Ga0055531_100022233 688
134 3300003794 Ga0055531_10002942 Ga0055531_100029423 688
135 3300004625 Ga0055543_1000876 Ga0055543_10008763 688
136 3300005262 Ga0065165_1002686 Ga0065165_10026863 688
137 3300005457 Ga0070662_100015991 Ga0070662_1000159913 688
138 3300005564 Ga0070664_100032942 Ga0070664_1000329423 688
139 3300009036 Ga0105244_10000730 Ga0105244_1000073018 688
140 3300009148 Ga0105243_10000392 Ga0105243_100003927 688
141 3300009148 Ga0105243_10002832 Ga0105243_1000283213 688
142 3300009148 Ga0105243_10027020 Ga0105243_100270202 688
143 3300014497 Ga0182008_10000625 Ga0182008_100006254 688
144 3300014497 Ga0182008_10005901 Ga0182008_100059014 688
145 3300015261 Ga0182006_1000910 Ga0182006_100091016 688
146 3300015262 Ga0182007_10003184 Ga0182007_100031844 688
147 3300025245 Ga0207425_1000440 Ga0207425_100044017 688
148 3300025258 Ga0209129_1000325 Ga0209129_100032536 688
149 3300025258 Ga0209129_1001419 Ga0209129_10014197 688
150 3300025258 Ga0209129_1005602 Ga0209129_10056023 688
151 3300025263 Ga0209565_1000027 Ga0209565_1000027305 688
152 3300025273 Ga0209673_1000031 Ga0209673_1000031295 688
153 3300025284 Ga0209130_1000025 Ga0209130_1000025346 688
154 3300025291 Ga0209675_1000157 Ga0209675_100015753 688
155 3300025292 Ga0209676_1000005 Ga0209676_1000005953 688
156 3300025292 Ga0209676_1000098 Ga0209676_1000098103 688
157 3300025294 Ga0209025_1000104 Ga0209025_100010467 688
158 3300025294 Ga0209025_1000977 Ga0209025_100097736 688
159 3300025295 Ga0209564_1000040 Ga0209564_1000040388 688
160 3300025297 Ga0209758_1000050 Ga0209758_100005053 688
161 3300025297 Ga0209758_1006121 Ga0209758_10061216 688
162 3300025298 Ga0209050_1000007 Ga0209050_1000007144 688
163 3300025299 Ga0209256_1000023 Ga0209256_100002353 688
164 3300025302 Ga0207426_1000202 Ga0207426_1000202103 688
165 3300025303 Ga0209051_1000036 Ga0209051_1000036304 688
166 3300025303 Ga0209051_1000098 Ga0209051_1000098103 688
167 3300025303 Ga0209051_1006413 Ga0209051_10064133 688
168 3300025304 Ga0209257_1000011 Ga0209257_1000011927 688
169 3300025304 Ga0209257_1003238 Ga0209257_100323810 688
170 3300025728 Ga0207655_1001409 Ga0207655_100140912 688
171 3300025933 Ga0207706_10011593 Ga0207706_100115933 688
172 3300025935 Ga0207709_10000130 Ga0207709_1000013036 688
173 3300025935 Ga0207709_10002008 Ga0207709_100020088 688
174 3300025935 Ga0207709_10013377 Ga0207709_100133773 688
175 3300025945 Ga0207679_10019883 Ga0207679_100198833 688
176 3300031235 Ga0265330_10000032 Ga0265330_1000003234 688
177 3300031238 Ga0265332_10000001 Ga0265332_1000000193 688
178 3300031241 Ga0265325_10003737 Ga0265325_100037377 688
179 3300031711 Ga0265314_10000022 Ga0265314_1000002293 688
180 3300031731 Ga0307405_10038944 Ga0307405_100389442 688
181 3300048919 Ga0496116_0035800 Ga0496116_0035800_784_3111 688
182 3300048921 Ga0496118_0019623 Ga0496118_0019623_147_2474 688
183 3300050496 nmdc:mga07m45_2775_c1 nmdc:mga07m45_2775_c1_5743_8061 688
184 3300053079 Ga0500610_0002029 Ga0500610_0002029_291_2609 688
185 3300053158 Ga0500627_0000384 Ga0500627_0000384_818_3136 688
186 3300015683 Ga0183362_10001 Ga0183362_100011037 689
187 3300028794 Ga0307515_10001095 Ga0307515_1000109529 689
188 3300031548 Ga0307408_100054177 Ga0307408_1000541773 689
189 3300031649 Ga0307514_10000528 Ga0307514_1000052835 689
190 3300041411 Ga0439466_0007207 Ga0439466_0007207_1848_4178 689
191 3300042006 Ga0439432_008067 Ga0439432_008067_153_2483 689
192 3300042435 Ga0439434_0008665 Ga0439434_0008665_389_2719 689
193 3300044673 Ga0453683_0001936 Ga0453683_0001936_7932_10319 689
194 3300045051 Ga0451576_0010625 Ga0451576_0010625_7522_9909 689
195 3300046616 Ga0495668_0018436 Ga0495668_0018436_620_2935 689
196 3300046660 Ga0495625_0061766 Ga0495625_0061766_135_2450 689
197 3300048904 Ga0496101_0002818 Ga0496101_0002818_7775_10117 689
198 3300050489 nmdc:mga03683_1615_c1 nmdc:mga03683_1615_c1_1339_3669 689
199 3300013100 Ga0157373_10035080 Ga0157373_100350803 690
200 3300014497 Ga0182008_10002974 Ga0182008_1000297410 690
201 3300014497 Ga0182008_10013842 Ga0182008_100138424 690
202 3300031456 Ga0307513_10005965 Ga0307513_100059651 690
203 3300046520 Ga0495637_0016532 Ga0495637_0016532_386_2704 690
204 3300046683 Ga0495658_0002021 Ga0495658_0002021_533_2851 690
205 3300047321 Ga0495676_0001586 Ga0495676_0001586_5367_7685 690
206 3300047673 Ga0495593_0009621 Ga0495593_0009621_2541_4859 690
207 3300048089 Ga0495614_0000554 Ga0495614_0000554_12828_15146 690
208 3300053110 Ga0500571_000523 Ga0500571_000523_994_3312 690
209 3300053134 Ga0500658_0000018 Ga0500658_0000018_133864_136182 690
210 3300053136 Ga0500559_0004366 Ga0500559_0004366_4309_6627 690
211 3300053139 Ga0500568_0005015 Ga0500568_0005015_2242_4560 690
212 3300053177 Ga0500636_0028727 Ga0500636_0028727_98_2416 690
213 3300053730 Ga0500645_000155 Ga0500645_000155_36536_38812 690
214 3300032002 Ga0307416_100024837 Ga0307416_1000248373 693
215 3300003773 Ga0055537_1000043 Ga0055537_100004377 695
216 3300003773 Ga0055537_1000046 Ga0055537_100004639 695
217 3300003775 Ga0055524_1000012 Ga0055524_1000012190 695
218 3300003784 Ga0055534_1004136 Ga0055534_10041362 695
219 3300003790 Ga0055528_1001310 Ga0055528_10013103 695
220 3300003791 Ga0055530_10000015 Ga0055530_1000001540 695
221 3300003792 Ga0055540_1000039 Ga0055540_1000039102 695
222 3300025263 Ga0209565_1000004 Ga0209565_1000004445 695
223 3300025273 Ga0209673_1000221 Ga0209673_100022176 695
224 3300025291 Ga0209675_1000061 Ga0209675_100006145 695
225 3300025292 Ga0209676_1000007 Ga0209676_1000007980 695
226 3300025294 Ga0209025_1006691 Ga0209025_10066916 695
227 3300025295 Ga0209564_1000681 Ga0209564_100068110 695
228 3300025298 Ga0209050_1000003 Ga0209050_1000003527 695
229 3300025299 Ga0209256_1000001 Ga0209256_1000001522 695
230 3300025302 Ga0207426_1003081 Ga0207426_10030816 695
231 3300025303 Ga0209051_1000003 Ga0209051_1000003527 695
232 3300025304 Ga0209257_1000018 Ga0209257_1000018527 695
233 3300053117 Ga0500593_010981 Ga0500593_010981_675_2978 695
234 3300025263 Ga0209565_1001352 Ga0209565_10013524 696
235 3300025291 Ga0209675_1001673 Ga0209675_100167311 696
236 3300025295 Ga0209564_1002295 Ga0209564_100229510 696
237 iso_pu_bacteria 2511231002 2511243825 697
238 3300002987 JGI25159J45721_1002111 JGI25159J45721_10021118 700
239 3300003354 JGI25160J50197_1000331 JGI25160J50197_100033123 700
240 3300003354 JGI25160J50197_1000446 JGI25160J50197_100044623 700
241 3300003374 JGI25161J50226_1000064 JGI25161J50226_100006487 700
242 3300004625 Ga0055543_1000284 Ga0055543_100028419 700
243 3300005262 Ga0065165_1009425 Ga0065165_10094251 700
244 3300025284 Ga0209130_1000094 Ga0209130_1000094126 700
245 3300025302 Ga0207426_1000025 Ga0207426_1000025433 700
246 3300002704 JGI25155J39150_1000036 JGI25155J39150_100003631 701
247 3300002705 JGI25156J39149_1000047 JGI25156J39149_100004757 701
248 3300002738 JGI25154J39366_1000068 JGI25154J39366_100006857 701
249 3300002741 JGI25157J39369_1000066 JGI25157J39369_100006657 701
250 3300025206 Ga0209435_100001 Ga0209435_100001771 701
251 3300025246 Ga0209646_1000001 Ga0209646_10000011140 701
252 3300025250 Ga0209026_1000003 Ga0209026_1000003771 701
253 3300025256 Ga0209759_1000001 Ga0209759_1000001771 701

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00403

HMA

Heavy-metal-associated domain

69

129

0.96

PF00122

E1-E2_ATPase

E1-E2 ATPase

285

464

0.95

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

480

699

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
1osd-assembly2.cif.gz_B crystal structure of oxidized merp from ralstonia metallidurans ch34 0.9631 34 100
2l3m-assembly1.cif.gz_A solution structure of the putative copper-ion-binding protein from bacillus anthracis str. ames 0.954 34 99
4a48-assembly1.cif.gz_A crosstalk between cu(i) and zn(ii) homeostasis 0.9516 34 100
3dxs-assembly1.cif.gz_X crystal structure of a copper binding domain from hma7, a p-type atpase 0.9505 34 100
4a4j-assembly1.cif.gz_A crosstalk between cu(i) and zn(ii) homeostasis 0.9412 34 100
ID Description Score Start End Superfamily
af_Q557B5_1074_1224_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9788 522 651 3.40.50.1000
af_Q54Q77_94_172_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9712 34 100 3.30.70.100
af_Q9VYT4_1008_1079_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9685 569 634 3.40.50.1000
af_Q4DIX9_393_509_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9665 244 357 2.70.150.10
af_I1MGV5_128_193_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9651 36 99 3.30.70.100
ID Description Score Start End GO Terms
AF-A0A432JR33-F1-model_v4 deleted 0.9853 271 350
AF-A0A7C5WIA2-F1-model_v4 Copper chaperone 0.9717 34 102 GO:0046872
AF-A0A4U9DE26-F1-model_v4 P-type Cu(+) transporter (EC 7.2.2.8) 0.9714 522 650 GO:0005507
GO:0005524
GO:0005886
GO:0016887
GO:0043682
GO:0055070
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9593 522 655 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9457 522 655 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003

Feature Viewer

pLDDT pTM Quality
71.75 0.52 Medium
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Predicted Structure (AlphaFold2)

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