F364224

General Info

Members Datasets Scaffolds Average Seq Length
253 195 229 461

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0085177|Ga0316582_0085177_86_1684
Length 532
Sequence MSHFKSIHLPIILLVFFLLLQVSPLLAQHTMEQTEPETTQVHQQHGEATHSTEHGSSLGTELPIWSVIPFIGILLSIAIFPLVAPRFWHHHFGKVSAFWALLLAIPFLIVYRGEAFYEILHIYLADYIPFIILLWALFTAAGGILVQGAPVGTPRANLVMLLIGTFLASWIGTTGAAMVLIRPMLRMNKYRKSKVHVIIFFIFLVANIGGSLTPLGDPPLFLGFLHHVPFFWTLKLFPEMLFVVVLVLSVFYVFDIILFRREGWHLKKYLKPYRYEVPEGMSEGEIKAAWEAGNLESEAGKPTSKKLSVMGLHNLLFLLGIMGGVLFSGLVKLGEVSIFGVHVAYQSMIRDAFLILMGILSLKTTAWSIREGNEFTWFPIKEVAKLFAGIFMTIVPALAMLRAGLTGELHFVIDAVKHEWHYFWITGALSSFLDNAPTYLTFLSTATGQFFAGIAEPQAVARLIAEQSLYLKAISTGAVFFGSMTYIGNAPNFMVKSIAEEQNIRMPSFFGYMIYSVLILVPIFVLVTFVFF

Samples

Sample ID Description Type Environment
1 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
2 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
3 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
4 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
5 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
6 2643221651 Afipia sp. Root123D2 Isolate Unclassified
7 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
8 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
9 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
10 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
11 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
12 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
13 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
14 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
15 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
16 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
17 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
18 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
19 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
20 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
21 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
22 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
23 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
29 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
30 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
31 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
32 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
33 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
72 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
73 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
74 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
75 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
78 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
101 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
102 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
107 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
110 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
118 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
121 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
130 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
131 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
132 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
138 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
144 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
145 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
156 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
168 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
169 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
170 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
176 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
179 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
180 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
181 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
182 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
183 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
190 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
191 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
194 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
195 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.91
Metatranscriptomes 0
Isolates 9.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.81
Nodule 5.14
Rhizoplane 2.37
Rhizosphere 62.45
Stem 0
Stem Tuber 0
Unclassified 14.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1006485 3300002987 Bacteria 3497
2 JGI25406J46586_10009166 3300003203 Bacteria 4440
3 Ga0065165_1008050 3300005262 Bacteria 5033
4 Ga0070658_10004822 3300005327 Bacteria 10986
5 Ga0070658_10018125 3300005327 Bacteria 5632
6 Ga0070680_100002437 3300005336 Bacteria 13786
7 Ga0070680_100028400 3300005336 Bacteria 4487
8 Ga0070680_100042819 3300005336 Bacteria 3675
9 Ga0070660_100032367 3300005339 Bacteria 3934
10 Ga0070668_100026908 3300005347 Bacteria 4366
11 Ga0070668_100130456 3300005347 Bacteria 2017
12 Ga0070674_100044523 3300005356 Bacteria 3026
13 Ga0070714_100100735 3300005435 Bacteria 2545
14 Ga0070710_10080213 3300005437 Bacteria 1903
15 Ga0070711_100103752 3300005439 Bacteria 2073
16 Ga0070694_100024763 3300005444 Bacteria 3876
17 Ga0070694_100045268 3300005444 Bacteria 2949
18 Ga0070678_100205893 3300005456 Bacteria 1627
19 Ga0070681_10032062 3300005458 Bacteria 5274
20 Ga0070681_10093191 3300005458 Bacteria 2961
21 Ga0070681_10222267 3300005458 Bacteria 1804
22 Ga0070699_100000878 3300005518 Bacteria 27965
23 Ga0070699_100025405 3300005518 Bacteria 5107
24 Ga0070699_100117478 3300005518 Bacteria 2338
25 Ga0070699_100127947 3300005518 Bacteria 2237
26 Ga0070679_100003954 3300005530 Bacteria 13644
27 Ga0070679_100058383 3300005530 Bacteria 3844
28 Ga0070679_100067263 3300005530 Bacteria 3573
29 Ga0070679_100126883 3300005530 Bacteria 2533
30 Ga0070695_100000532 3300005545 Bacteria 20136
31 Ga0070695_100035918 3300005545 Bacteria 3116
32 Ga0068855_100017104 3300005563 Bacteria 8723
33 Ga0068854_100108727 3300005578 Bacteria 2089
34 Ga0068856_100054968 3300005614 Bacteria 3929
35 Ga0068852_100034536 3300005616 Bacteria 4209
36 Ga0068852_100060300 3300005616 Bacteria 3293
37 Ga0068866_10068021 3300005718 Bacteria 1872
38 Ga0068861_100017627 3300005719 Bacteria 5074
39 Ga0068863_100096559 3300005841 Bacteria 2806
40 Ga0068862_100001119 3300005844 Bacteria 25436
41 Ga0081539_10003427 3300005985 Bacteria 19507
42 Ga0075365_10005009 3300006038 Bacteria 7096
43 Ga0075365_10033886 3300006038 Bacteria 3294
44 Ga0075364_10136699 3300006051 Bacteria 1647
45 Ga0075362_10006471 3300006177 Bacteria 4370
46 Ga0075367_10036543 3300006178 Bacteria 2849
47 Ga0075366_10004342 3300006195 Bacteria 7601
48 Ga0075370_10029333 3300006353 Bacteria 3064
49 Ga0075428_100060660 3300006844 Bacteria 4142
50 Ga0075434_100097043 3300006871 Bacteria 2952
51 Ga0075434_100125238 3300006871 Bacteria 2587
52 Ga0068865_100010558 3300006881 Bacteria 5753
53 Ga0099794_10011810 3300007265 Bacteria 3751
54 Ga0105240_10082441 3300009093 Bacteria 3950
55 Ga0105240_10164824 3300009093 Bacteria 2629
56 Ga0111539_10008977 3300009094 Bacteria 12657
57 Ga0105245_10078087 3300009098 Bacteria 3020
58 Ga0105247_10014949 3300009101 Bacteria 4654
59 Ga0105241_10084351 3300009174 Bacteria 2494
60 Ga0105238_10087315 3300009551 Bacteria 3106
61 Ga0105238_10201193 3300009551 Bacteria 1967
62 Ga0157371_10003489 3300013102 Bacteria 14224
63 Ga0157370_10142063 3300013104 Bacteria 2237
64 Ga0157370_10148396 3300013104 Bacteria 2183
65 Ga0157378_10057183 3300013297 Bacteria 3476
66 Ga0163162_10106173 3300013306 Bacteria 2903
67 Ga0157372_10034899 3300013307 Bacteria 5535
68 Ga0157372_10344413 3300013307 Bacteria 1736
69 Ga0157377_10042575 3300014745 Bacteria 2522
70 Ga0157376_10097836 3300014969 Bacteria 2557
71 Ga0214544_1000005 3300021320 Bacteria 387675
72 Ga0214542_1000004 3300021321 Bacteria 415597
73 Ga0214545_1000005 3300021324 Bacteria 415590
74 Ga0214543_1000111 3300021327 Bacteria 106517
75 Ga0209130_1001405 3300025284 Bacteria 16093
76 Ga0209675_1000445 3300025291 Bacteria 32155
77 Ga0209675_1000922 3300025291 Bacteria 18751
78 Ga0209025_1002862 3300025294 Bacteria 17311
79 Ga0209564_1002226 3300025295 Bacteria 16043
80 Ga0207705_10024283 3300025909 Bacteria 4327
81 Ga0207707_10056394 3300025912 Bacteria 3418
82 Ga0207707_10068876 3300025912 Bacteria 3084
83 Ga0207707_10165275 3300025912 Bacteria 1934
84 Ga0207695_10061881 3300025913 Bacteria 3867
85 Ga0207695_10153131 3300025913 Bacteria 2243
86 Ga0207660_10008752 3300025917 Bacteria 6544
87 Ga0207660_10120104 3300025917 Bacteria 1989
88 Ga0207657_10016537 3300025919 Bacteria 7112
89 Ga0207646_10021670 3300025922 Bacteria 5932
90 Ga0207681_10044562 3300025923 Bacteria 2974
91 Ga0207694_10027318 3300025924 Bacteria 4346
92 Ga0207694_10199519 3300025924 Bacteria 1627
93 Ga0207687_10101004 3300025927 Bacteria 2123
94 Ga0207664_10006630 3300025929 Bacteria 7974
95 Ga0207706_10083403 3300025933 Bacteria 2810
96 Ga0207691_10050188 3300025940 Bacteria 3821
97 Ga0207667_10010593 3300025949 Bacteria 10769
98 Ga0207667_10042521 3300025949 Bacteria 4828
99 Ga0207667_10109062 3300025949 Bacteria 2855
100 Ga0207668_10025803 3300025972 Bacteria 3807
101 Ga0207703_10123710 3300026035 Bacteria 2224
102 Ga0207702_10062956 3300026078 Bacteria 3170
103 Ga0207702_10104723 3300026078 Bacteria 2504
104 Ga0207648_10121777 3300026089 Bacteria 2294
105 Ga0207674_10097642 3300026116 Bacteria 2922
106 Ga0207675_100027083 3300026118 Bacteria 5337
107 Ga0207683_10211328 3300026121 Bacteria 1766
108 Ga0207698_10011168 3300026142 Bacteria 5809
109 Ga0209389_1000086 3300027296 Bacteria 84925
110 Ga0209589_1000027 3300027357 Bacteria 155295
111 Ga0209489_100313 3300027361 Bacteria 85507
112 Ga0268265_10000467 3300028380 Bacteria 42804
113 Ga0268264_10120563 3300028381 Bacteria 2311
114 Ga0307515_10146372 3300028794 Bacteria 2499
115 Ga0265320_10055439 3300031240 Bacteria 1907
116 Ga0265313_10005703 3300031595 Bacteria 9081
117 Ga0265314_10000439 3300031711 Bacteria 55613
118 Ga0265342_10000563 3300031712 Bacteria 39193
119 Ga0316576_10011643 3300031727 Bacteria 5774
120 Ga0307409_100155750 3300031995 Bacteria 1990
121 Ga0307411_10073576 3300032005 Bacteria 2325
122 Ga0373954_0001483 3300035118 Bacteria 9541
123 Ga0373927_0022016 3300035695 Bacteria 4177
124 Ga0373927_0045717 3300035695 Bacteria 2832
125 Ga0373933_0061420 3300035724 Bacteria 2267
126 Ga0373937_0003769 3300036401 Bacteria 12815
127 Ga0373937_0013947 3300036401 Bacteria 7085
128 Ga0316582_0085177 3300036647 Bacteria 2071
129 Ga0316584_0181990 3300036712 Bacteria 1556
130 Ga0395900_0031081 3300037418 Bacteria 5485
131 Ga0400491_06184 3300038727 Bacteria 2053
132 Ga0400483_071553 3300039062 Bacteria 20222
133 Ga0451577_0001625 3300042876 Bacteria 29150
134 Ga0453683_0008009 3300044673 Bacteria 7121
135 Ga0453684_0003071 3300044712 Bacteria 38643
136 Ga0451576_0006926 3300045051 Bacteria 13729
137 Ga0451576_0136632 3300045051 Bacteria 2557
138 Ga0495638_0005305 3300046460 Bacteria 9619
139 Ga0495638_0011885 3300046460 Bacteria 5985
140 Ga0495584_0035028 3300046491 Bacteria 2538
141 Ga0495610_0035712 3300046512 Bacteria 2548
142 Ga0495648_0003184 3300046524 Bacteria 14604
143 Ga0495656_0009963 3300046615 Bacteria 3439
144 Ga0495669_0005897 3300046684 Bacteria 5106
145 Ga0495672_0047164 3300047320 Bacteria 2564
146 Ga0496101_0129266 3300048904 Bacteria 1917
147 Ga0496102_0045315 3300048905 Bacteria 3993
148 Ga0496105_0133914 3300048908 Unclassified 2042
149 Ga0496106_0000743 3300048909 Bacteria 23497
150 Ga0496115_0205912 3300048918 Bacteria 1625
151 Ga0496116_0004615 3300048919 Bacteria 13063
152 Ga0496117_0009472 3300048920 Bacteria 9058
153 Ga0496117_0037528 3300048920 Bacteria 3608
154 Ga0496118_0002385 3300048921 Bacteria 25382
155 Ga0496118_0013389 3300048921 Bacteria 7763
156 Ga0496118_0047765 3300048921 Bacteria 3314
157 Ga0496118_0115534 3300048921 Bacteria 1766
158 Ga0496121_0000555 3300048924 Bacteria 70509
159 Ga0496121_0003740 3300048924 Bacteria 21314
160 Ga0496121_0021998 3300048924 Bacteria 6212
161 Ga0496121_0069480 3300048924 Bacteria 2842
162 Ga0496122_0143637 3300048925 Bacteria 1488
163 Ga0496123_0014310 3300048926 Bacteria 6586
164 Ga0496124_0001875 3300048927 Bacteria 28930
165 Ga0496125_0015904 3300048928 Bacteria 7248
166 Ga0496126_0005886 3300048929 Bacteria 13830
167 Ga0496126_0006275 3300048929 Bacteria 13277
168 Ga0501033_0026594 3300049570 Bacteria 4353
169 Ga0501034_0027118 3300049571 Bacteria 5828
170 Ga0501034_0098683 3300049571 Bacteria 2916
171 Ga0501034_0099552 3300049571 Bacteria 2901
172 Ga0501036_0012261 3300049572 Bacteria 7101
173 Ga0501036_0043149 3300049572 Bacteria 3819
174 Ga0501037_0091533 3300049573 Bacteria 2199
175 Ga0501040_0049902 3300049576 Bacteria 2862
176 Ga0501047_0010952 3300049581 Bacteria 8580
177 Ga0501048_0013854 3300049582 Bacteria 5981
178 Ga0501067_0144433 3300049583 Bacteria 1326
179 Ga0501069_0025509 3300049585 Bacteria 3232
180 Ga0501070_0007789 3300049586 Bacteria 9081
181 Ga0501070_0038951 3300049586 Bacteria 3966
182 Ga0501070_0065730 3300049586 Bacteria 3003
183 Ga0501072_0009963 3300049588 Bacteria 7228
184 Ga0501073_0043321 3300049589 Bacteria 3173
185 Ga0501074_0033197 3300049590 Bacteria 3740
186 Ga0501076_0105546 3300049592 Bacteria 2274
187 Ga0501080_0011237 3300049742 Bacteria 8196
188 Ga0501080_0016228 3300049742 Bacteria 6875
189 Ga0501080_0206790 3300049742 Bacteria 1800
190 Ga0501081_0045223 3300049743 Bacteria 3023
191 Ga0501083_0005382 3300049744 Bacteria 9057
192 Ga0501083_0053864 3300049744 Bacteria 2700
193 Ga0501035_0156401 3300049822 Bacteria 1976
194 Ga0501044_0066251 3300049823 Bacteria 3683
195 Ga0501044_0066974 3300049823 Bacteria 3660
196 Ga0501044_0159874 3300049823 Bacteria 2230
197 Ga0501045_0131952 3300049824 Bacteria 1857
198 Ga0501045_0166502 3300049824 Bacteria 1641
199 nmdc:mga03683_30305_c1 3300050489 Bacteria 2164
200 nmdc:mga0yw44_20260_c1 3300050492 Bacteria 3687
201 nmdc:mga0yw44_27779_c1 3300050492 Bacteria 3246
202 nmdc:mga07m45_84306_c1 3300050496 Bacteria 1817
203 nmdc:mga0qj67_69529_c1 3300050509 Bacteria 2808
204 nmdc:mga08y16_29475_c1 3300050511 Bacteria 5782
205 nmdc:mga0n895_177535_c1 3300050512 Bacteria 2161
206 Ga0500610_0053889 3300053079 Bacteria 2097
207 Ga0500644_0000294 3300053088 Bacteria 26828
208 Ga0500651_0091145 3300053093 Bacteria 1876
209 Ga0500566_0001874 3300053094 Bacteria 12376
210 Ga0500641_0000636 3300053096 Bacteria 12678
211 Ga0500556_0000005 3300053104 Bacteria 581135
212 Ga0500592_000795 3300053116 Bacteria 5185
213 Ga0500595_005628 3300053119 Bacteria 5447
214 Ga0500608_000871 3300053122 Bacteria 10890
215 Ga0500642_0000009 3300053130 Bacteria 286829
216 Ga0500652_001138 3300053131 Bacteria 8538
217 Ga0500559_0000723 3300053136 Bacteria 21728
218 Ga0500568_0003913 3300053139 Bacteria 8104
219 Ga0500568_0012070 3300053139 Bacteria 3983
220 Ga0500573_0034727 3300053140 Bacteria 2908
221 Ga0500616_0000001 3300053153 Bacteria 1986011
222 Ga0500616_0000035 3300053153 Bacteria 394242
223 Ga0500616_0013430 3300053153 Bacteria 4755
224 Ga0500622_0004490 3300053156 Bacteria 8740
225 Ga0500636_0000344 3300053177 Bacteria 25582
226 Ga0500611_001230 3300053727 Bacteria 2748
227 Ga0500645_000559 3300053730 Bacteria 24493
228 Ga0501082_0001003 3300060353 Bacteria 24930
229 Ga0530510_0147011 3300061734 Bacteria 1739

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0043149 Ga0501036_0043149_280_1491 367
2 3300049583 Ga0501067_0144433 Ga0501067_0144433_121_1314 390
3 3300050496 nmdc:mga07m45_84306_c1 nmdc:mga07m45_84306_c1_22_1296 396
4 3300031240 Ga0265320_10055439 Ga0265320_100554391 403
5 3300035118 Ga0373954_0001483 Ga0373954_0001483_5818_7149 409
6 3300035695 Ga0373927_0045717 Ga0373927_0045717_1293_2624 409
7 3300035724 Ga0373933_0061420 Ga0373933_0061420_878_2209 409
8 3300036401 Ga0373937_0003769 Ga0373937_0003769_5954_7285 409
9 3300050512 nmdc:mga0n895_177535_c1 nmdc:mga0n895_177535_c1_245_1543 412
10 3300005444 Ga0070694_100045268 Ga0070694_1000452683 414
11 3300005545 Ga0070695_100000532 Ga0070695_1000005326 414
12 3300014745 Ga0157377_10042575 Ga0157377_100425752 414
13 3300007265 Ga0099794_10011810 Ga0099794_100118103 415
14 3300039062 Ga0400483_071553 Ga0400483_071553_16061_17614 415
15 3300025912 Ga0207707_10068876 Ga0207707_100688763 416
16 3300025949 Ga0207667_10042521 Ga0207667_100425212 416
17 3300005844 Ga0068862_100001119 Ga0068862_10000111912 420
18 3300028380 Ga0268265_10000467 Ga0268265_1000046728 420
19 3300046524 Ga0495648_0003184 Ga0495648_0003184_3598_4956 421
20 3300006177 Ga0075362_10006471 Ga0075362_100064712 422
21 3300006195 Ga0075366_10004342 Ga0075366_100043427 422
22 3300009093 Ga0105240_10164824 Ga0105240_101648242 422
23 3300009174 Ga0105241_10084351 Ga0105241_100843512 422
24 3300013102 Ga0157371_10003489 Ga0157371_100034897 422
25 3300013104 Ga0157370_10142063 Ga0157370_101420632 422
26 3300013307 Ga0157372_10034899 Ga0157372_100348993 422
27 3300025909 Ga0207705_10024283 Ga0207705_100242833 422
28 3300025917 Ga0207660_10008752 Ga0207660_100087523 422
29 3300026078 Ga0207702_10062956 Ga0207702_100629562 422
30 3300037418 Ga0395900_0031081 Ga0395900_0031081_488_1867 422
31 3300050489 nmdc:mga03683_30305_c1 nmdc:mga03683_30305_c1_515_1924 422
32 3300048924 Ga0496121_0021998 Ga0496121_0021998_4795_6153 423
33 3300025295 Ga0209564_1002226 Ga0209564_100222611 425
34 3300048920 Ga0496117_0037528 Ga0496117_0037528_1582_2946 426
35 3300048921 Ga0496118_0013389 Ga0496118_0013389_5659_7023 426
36 3300048925 Ga0496122_0143637 Ga0496122_0143637_51_1415 426
37 3300050492 nmdc:mga0yw44_20260_c1 nmdc:mga0yw44_20260_c1_454_1818 426
38 3300005439 Ga0070711_100103752 Ga0070711_1001037522 427
39 3300009094 Ga0111539_10008977 Ga0111539_1000897710 427
40 3300050511 nmdc:mga08y16_29475_c1 nmdc:mga08y16_29475_c1_1479_2825 427
41 iso_pu_bacteria 2885383462 2885392396 427
42 3300005518 Ga0070699_100000878 Ga0070699_1000008785 428
43 3300005518 Ga0070699_100025405 Ga0070699_1000254055 429
44 3300005518 Ga0070699_100117478 Ga0070699_1001174783 429
45 3300006871 Ga0075434_100125238 Ga0075434_1001252382 429
46 3300025922 Ga0207646_10021670 Ga0207646_100216705 429
47 3300044673 Ga0453683_0008009 Ga0453683_0008009_2598_3947 429
48 3300045051 Ga0451576_0006926 Ga0451576_0006926_8735_10084 429
49 3300049571 Ga0501034_0099552 Ga0501034_0099552_964_2373 429
50 3300049572 Ga0501036_0012261 Ga0501036_0012261_28_1437 429
51 3300049573 Ga0501037_0091533 Ga0501037_0091533_113_1522 429
52 3300049581 Ga0501047_0010952 Ga0501047_0010952_2911_4320 429
53 3300049742 Ga0501080_0016228 Ga0501080_0016228_4092_5501 429
54 3300049823 Ga0501044_0159874 Ga0501044_0159874_452_1861 429
55 3300053093 Ga0500651_0091145 Ga0500651_0091145_267_1700 429
56 3300053140 Ga0500573_0034727 Ga0500573_0034727_432_1853 429
57 3300048919 Ga0496116_0004615 Ga0496116_0004615_5543_6907 430
58 3300005437 Ga0070710_10080213 Ga0070710_100802132 431
59 3300042876 Ga0451577_0001625 Ga0451577_0001625_21080_22576 431
60 3300044712 Ga0453684_0003071 Ga0453684_0003071_25318_26814 431
61 3300049744 Ga0501083_0053864 Ga0501083_0053864_1355_2683 431
62 3300048909 Ga0496106_0000743 Ga0496106_0000743_2506_3927 432
63 3300048920 Ga0496117_0009472 Ga0496117_0009472_5956_7377 432
64 3300048921 Ga0496118_0002385 Ga0496118_0002385_22302_23723 432
65 3300048924 Ga0496121_0000555 Ga0496121_0000555_22249_23670 432
66 3300048927 Ga0496124_0001875 Ga0496124_0001875_1949_3370 432
67 3300048929 Ga0496126_0006275 Ga0496126_0006275_10862_12283 432
68 3300050509 nmdc:mga0qj67_69529_c1 nmdc:mga0qj67_69529_c1_12_1349 432
69 3300005444 Ga0070694_100024763 Ga0070694_1000247632 433
70 3300005545 Ga0070695_100035918 Ga0070695_1000359182 433
71 3300036712 Ga0316584_0181990 Ga0316584_0181990_23_1531 433
72 3300038727 Ga0400491_06184 Ga0400491_06184_301_1839 433
73 3300005347 Ga0070668_100130456 Ga0070668_1001304562 434
74 3300048924 Ga0496121_0069480 Ga0496121_0069480_205_1563 434
75 3300025291 Ga0209675_1000922 Ga0209675_100092214 436
76 3300003203 JGI25406J46586_10009166 JGI25406J46586_100091662 438
77 3300005985 Ga0081539_10003427 Ga0081539_1000342710 438
78 3300006871 Ga0075434_100097043 Ga0075434_1000970432 438
79 3300009551 Ga0105238_10201193 Ga0105238_102011933 438
80 3300025924 Ga0207694_10199519 Ga0207694_101995191 438
81 3300048918 Ga0496115_0205912 Ga0496115_0205912_70_1425 438
82 3300049586 Ga0501070_0065730 Ga0501070_0065730_1381_2742 438
83 3300049744 Ga0501083_0005382 Ga0501083_0005382_4253_5614 438
84 3300005336 Ga0070680_100002437 Ga0070680_10000243711 439
85 3300005458 Ga0070681_10032062 Ga0070681_100320624 439
86 3300005530 Ga0070679_100003954 Ga0070679_10000395415 439
87 3300005578 Ga0068854_100108727 Ga0068854_1001087271 439
88 3300009093 Ga0105240_10082441 Ga0105240_100824412 439
89 3300013104 Ga0157370_10148396 Ga0157370_101483961 439
90 3300013307 Ga0157372_10344413 Ga0157372_103444132 439
91 3300025912 Ga0207707_10056394 Ga0207707_100563941 439
92 3300025913 Ga0207695_10153131 Ga0207695_101531312 439
93 3300025917 Ga0207660_10120104 Ga0207660_101201042 439
94 3300053096 Ga0500641_0000636 Ga0500641_0000636_4906_6390 441
95 3300006038 Ga0075365_10005009 Ga0075365_100050095 442
96 3300006178 Ga0075367_10036543 Ga0075367_100365432 442
97 3300006353 Ga0075370_10029333 Ga0075370_100293332 442
98 3300009101 Ga0105247_10014949 Ga0105247_100149491 442
99 3300048908 Ga0496105_0133914 Ga0496105_0133914_23_1378 442
100 3300006844 Ga0075428_100060660 Ga0075428_1000606602 443
101 3300031727 Ga0316576_10011643 Ga0316576_100116435 443
102 3300049588 Ga0501072_0009963 Ga0501072_0009963_3582_5003 443
103 3300049742 Ga0501080_0206790 Ga0501080_0206790_373_1776 443
104 3300005327 Ga0070658_10004822 Ga0070658_100048223 444
105 3300005563 Ga0068855_100017104 Ga0068855_1000171046 444
106 3300005614 Ga0068856_100054968 Ga0068856_1000549682 444
107 3300005616 Ga0068852_100034536 Ga0068852_1000345364 444
108 3300009551 Ga0105238_10087315 Ga0105238_100873152 444
109 3300025913 Ga0207695_10061881 Ga0207695_100618812 444
110 3300025924 Ga0207694_10027318 Ga0207694_100273183 444
111 3300025949 Ga0207667_10010593 Ga0207667_100105935 444
112 3300026078 Ga0207702_10104723 Ga0207702_101047232 444
113 3300026116 Ga0207674_10097642 Ga0207674_100976423 444
114 3300026142 Ga0207698_10011168 Ga0207698_100111686 444
115 3300049571 Ga0501034_0098683 Ga0501034_0098683_431_1870 445
116 3300049822 Ga0501035_0156401 Ga0501035_0156401_204_1643 445
117 3300049823 Ga0501044_0066251 Ga0501044_0066251_900_2339 445
118 3300060353 Ga0501082_0001003 Ga0501082_0001003_12576_14015 446
119 3300005435 Ga0070714_100100735 Ga0070714_1001007352 447
120 3300005616 Ga0068852_100060300 Ga0068852_1000603002 447
121 3300025949 Ga0207667_10109062 Ga0207667_101090623 447
122 iso_pu_bacteria 2824617872 2824623783 447
123 iso_pu_bacteria 2824626560 2824632156 447
124 iso_pu_bacteria 2824635225 2824643580 447
125 iso_pu_bacteria 2824644064 2824649071 447
126 iso_pu_bacteria 2824714736 2824720904 447
127 iso_pu_bacteria 2824723954 2824731077 447
128 3300045051 Ga0451576_0136632 Ga0451576_0136632_354_1859 448
129 3300049571 Ga0501034_0027118 Ga0501034_0027118_2855_4288 448
130 3300053104 Ga0500556_0000005 Ga0500556_0000005_533358_534794 448
131 3300028794 Ga0307515_10146372 Ga0307515_101463722 450
132 3300048924 Ga0496121_0003740 Ga0496121_0003740_9700_11136 450
133 3300048928 Ga0496125_0015904 Ga0496125_0015904_552_1988 450
134 3300053116 Ga0500592_000795 Ga0500592_000795_872_2308 450
135 3300053156 Ga0500622_0004490 Ga0500622_0004490_4178_5614 450
136 3300006038 Ga0075365_10033886 Ga0075365_100338863 451
137 3300021320 Ga0214544_1000005 Ga0214544_100000596 451
138 3300021321 Ga0214542_1000004 Ga0214542_1000004100 451
139 3300021324 Ga0214545_1000005 Ga0214545_1000005297 451
140 3300021327 Ga0214543_1000111 Ga0214543_10001118 451
141 3300027296 Ga0209389_1000086 Ga0209389_100008618 451
142 3300027357 Ga0209589_1000027 Ga0209589_100002767 451
143 3300027361 Ga0209489_100313 Ga0209489_10031318 451
144 3300046512 Ga0495610_0035712 Ga0495610_0035712_269_1705 451
145 3300050492 nmdc:mga0yw44_27779_c1 nmdc:mga0yw44_27779_c1_1206_2642 451
146 3300053130 Ga0500642_0000009 Ga0500642_0000009_21428_22864 451
147 3300053139 Ga0500568_0003913 Ga0500568_0003913_4829_6265 451
148 iso_pu_bacteria 2513237098 2513677212 451
149 3300005336 Ga0070680_100028400 Ga0070680_1000284003 452
150 3300005458 Ga0070681_10222267 Ga0070681_102222671 452
151 3300005530 Ga0070679_100126883 Ga0070679_1001268833 452
152 3300025912 Ga0207707_10165275 Ga0207707_101652752 452
153 3300049586 Ga0501070_0007789 Ga0501070_0007789_5845_7224 452
154 3300049590 Ga0501074_0033197 Ga0501074_0033197_1826_3205 452
155 3300049742 Ga0501080_0011237 Ga0501080_0011237_4337_5716 452
156 3300053119 Ga0500595_005628 Ga0500595_005628_1570_2982 452
157 3300031711 Ga0265314_10000439 Ga0265314_1000043944 453
158 iso_pu_bacteria 8056689827 8056696119 453
159 3300005841 Ga0068863_100096559 Ga0068863_1000965593 454
160 3300036647 Ga0316582_0085177 Ga0316582_0085177_86_1684 454
161 3300046491 Ga0495584_0035028 Ga0495584_0035028_1015_2436 454
162 3300053153 Ga0500616_0013430 Ga0500616_0013430_1627_3045 454
163 iso_pu_bacteria 2728368998 2728755396 454
164 3300046460 Ga0495638_0005305 Ga0495638_0005305_4004_5425 455
165 3300046460 Ga0495638_0011885 Ga0495638_0011885_1863_3284 455
166 3300047320 Ga0495672_0047164 Ga0495672_0047164_202_1653 455
167 3300049576 Ga0501040_0049902 Ga0501040_0049902_252_1643 455
168 3300049582 Ga0501048_0013854 Ga0501048_0013854_3628_5019 455
169 3300049592 Ga0501076_0105546 Ga0501076_0105546_38_1429 455
170 3300049743 Ga0501081_0045223 Ga0501081_0045223_338_1729 455
171 3300049824 Ga0501045_0131952 Ga0501045_0131952_338_1729 455
172 3300053079 Ga0500610_0053889 Ga0500610_0053889_183_1604 455
173 3300061734 Ga0530510_0147011 Ga0530510_0147011_319_1710 455
174 3300005327 Ga0070658_10018125 Ga0070658_100181254 456
175 3300005336 Ga0070680_100042819 Ga0070680_1000428193 456
176 3300005339 Ga0070660_100032367 Ga0070660_1000323672 456
177 3300005458 Ga0070681_10093191 Ga0070681_100931912 456
178 3300005530 Ga0070679_100058383 Ga0070679_1000583833 456
179 3300005530 Ga0070679_100067263 Ga0070679_1000672632 456
180 3300025919 Ga0207657_10016537 Ga0207657_100165372 456
181 3300031595 Ga0265313_10005703 Ga0265313_100057036 456
182 3300031712 Ga0265342_10000563 Ga0265342_100005632 456
183 3300005347 Ga0070668_100026908 Ga0070668_1000269083 457
184 3300005356 Ga0070674_100044523 Ga0070674_1000445233 457
185 3300005456 Ga0070678_100205893 Ga0070678_1002058931 457
186 3300005718 Ga0068866_10068021 Ga0068866_100680212 457
187 3300005719 Ga0068861_100017627 Ga0068861_1000176274 457
188 3300006881 Ga0068865_100010558 Ga0068865_1000105584 457
189 3300009098 Ga0105245_10078087 Ga0105245_100780873 457
190 3300013297 Ga0157378_10057183 Ga0157378_100571833 457
191 3300013306 Ga0163162_10106173 Ga0163162_101061732 457
192 3300014969 Ga0157376_10097836 Ga0157376_100978362 457
193 3300025923 Ga0207681_10044562 Ga0207681_100445622 457
194 3300025927 Ga0207687_10101004 Ga0207687_101010042 457
195 3300025933 Ga0207706_10083403 Ga0207706_100834032 457
196 3300025940 Ga0207691_10050188 Ga0207691_100501883 457
197 3300025972 Ga0207668_10025803 Ga0207668_100258033 457
198 3300026035 Ga0207703_10123710 Ga0207703_101237102 457
199 3300026089 Ga0207648_10121777 Ga0207648_101217772 457
200 3300026118 Ga0207675_100027083 Ga0207675_1000270834 457
201 3300026121 Ga0207683_10211328 Ga0207683_102113282 457
202 3300028381 Ga0268264_10120563 Ga0268264_101205631 457
203 3300046615 Ga0495656_0009963 Ga0495656_0009963_1461_2885 457
204 3300046684 Ga0495669_0005897 Ga0495669_0005897_2802_4226 457
205 3300048904 Ga0496101_0129266 Ga0496101_0129266_351_1775 457
206 3300048905 Ga0496102_0045315 Ga0496102_0045315_51_1475 457
207 3300053727 Ga0500611_001230 Ga0500611_001230_201_1631 457
208 iso_pu_bacteria 2903768456 2903773268 457
209 iso_pu_bacteria 8056681323 8056681774 457
210 3300005518 Ga0070699_100127947 Ga0070699_1001279472 458
211 3300025291 Ga0209675_1000445 Ga0209675_100044511 458
212 3300036401 Ga0373937_0013947 Ga0373937_0013947_1047_2471 458
213 3300053088 Ga0500644_0000294 Ga0500644_0000294_19975_21444 458
214 3300053153 Ga0500616_0000001 Ga0500616_0000001_645719_647149 458
215 3300053730 Ga0500645_000559 Ga0500645_000559_20338_21771 458
216 iso_pu_bacteria 2824679649 2824682390 458
217 iso_pu_bacteria 2922393267 2922398284 458
218 3300025294 Ga0209025_1002862 Ga0209025_100286218 459
219 3300049582 Ga0501048_0013854 Ga0501048_0013854_2060_3514 459
220 3300049824 Ga0501045_0166502 Ga0501045_0166502_55_1509 459
221 3300006051 Ga0075364_10136699 Ga0075364_101366991 460
222 3300031995 Ga0307409_100155750 Ga0307409_1001557501 460
223 3300032005 Ga0307411_10073576 Ga0307411_100735762 460
224 3300035695 Ga0373927_0022016 Ga0373927_0022016_2567_3982 460
225 iso_pu_bacteria 2513237102 2513704481 460
226 iso_pu_bacteria 2885366525 2885373695 460
227 3300049586 Ga0501070_0038951 Ga0501070_0038951_95_1534 461
228 3300049823 Ga0501044_0066974 Ga0501044_0066974_454_1893 461
229 3300025929 Ga0207664_10006630 Ga0207664_100066306 462
230 iso_pu_bacteria 2643221651 2644290609 462
231 3300048921 Ga0496118_0047765 Ga0496118_0047765_842_2263 463
232 3300048921 Ga0496118_0115534 Ga0496118_0115534_231_1667 463
233 3300048926 Ga0496123_0014310 Ga0496123_0014310_4745_6163 463
234 3300048929 Ga0496126_0005886 Ga0496126_0005886_8582_9997 463
235 3300053094 Ga0500566_0001874 Ga0500566_0001874_6253_7704 463
236 3300053122 Ga0500608_000871 Ga0500608_000871_1651_3102 463
237 3300053131 Ga0500652_001138 Ga0500652_001138_4438_5874 463
238 3300053136 Ga0500559_0000723 Ga0500559_0000723_10331_11782 463
239 3300053139 Ga0500568_0012070 Ga0500568_0012070_1283_2731 463
240 3300053153 Ga0500616_0000035 Ga0500616_0000035_85945_87381 463
241 3300053177 Ga0500636_0000344 Ga0500636_0000344_15289_16740 463
242 iso_pu_bacteria 2602042107 2603857950 463
243 iso_pu_bacteria 2643221551 2643777698 463
244 iso_pu_bacteria 2643221555 2643796146 463
245 iso_pu_bacteria 2857524615 2857527330 463
246 iso_pu_bacteria 2893066018 2893071871 463
247 iso_pu_bacteria 2919073203 2919078442 463
248 3300002987 JGI25159J45721_1006485 JGI25159J45721_10064852 464
249 3300005262 Ga0065165_1008050 Ga0065165_10080504 464
250 3300025284 Ga0209130_1001405 Ga0209130_100140516 464
251 3300049570 Ga0501033_0026594 Ga0501033_0026594_2549_4042 464
252 3300049585 Ga0501069_0025509 Ga0501069_0025509_189_1619 464
253 3300049589 Ga0501073_0043321 Ga0501073_0043321_1321_2754 464

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16980

CitMHS_2

Putative citrate transport

59

532

0.96

PF03600

CitMHS

Citrate transporter

136

465

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
4f35-assembly2.cif.gz_B crystal structure of a bacterial dicarboxylate/sodium symporter 0.548 2 457
4f35-assembly2.cif.gz_B crystal structure of a bacterial dicarboxylate/sodium symporter 0.5377 2 457
6ol0-assembly2.cif.gz_B structure of vcindy bound to malate 0.5349 33 460
6ol0-assembly2.cif.gz_B structure of vcindy bound to malate 0.5266 33 460
7jsj-assembly1.cif.gz_A structure of the nact-pf2 complex 0.4886 42 461
ID Description Score Start End Superfamily
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.677 33 458 1.20.1530.20
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.6643 33 458 1.20.1530.20
af_I1JNP6_2_129_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3217 358 458 1.25.40.10
af_A0A0P0VXU3_361_513_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.2895 335 439 1.25.40.10
af_I1JNP6_2_129_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.2692 358 458 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A2W6Y933-F1-model_v4 Sodium:proton antiporter 0.9951 30 464 GO:0016020
AF-A0A4P6HFJ2-F1-model_v4 Sodium:proton antiporter 0.9943 30 464 GO:0016020
AF-A0A852S3N4-F1-model_v4 deleted 0.9939 30 464
AF-A0A4R9S0F3-F1-model_v4 deleted 0.9935 30 464
AF-A0A5B8BCH6-F1-model_v4 Sodium:proton antiporter 0.9856 30 464 GO:0016020

Feature Viewer

pLDDT pTM Quality
89.51 0.87 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map