F363189

General Info

Members Datasets Scaffolds Average Seq Length
252 188 504 348

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10138135|Ga0105240_101381352
Length 400
Sequence LRTANKIGALWHTERFTEERRKTRGKTENLMQSVLITGGAGFIGQNLVHAWRAARPDDRIVVLDTMTYAANIRSLQPLIADRQIIFEKGDIRDANLVERLFGEHGFSRLAHLAAESHVDRSIVDPEAFLQTNIFGTFTLLNAALKYWRAANMMGQARFLHVSTDEVYGSLLASDPGFCETSPYRPNSPYAASKAGSDHLVRAYATTYGLPALITNCSNNYGPYQHPEKLIPLMIIQALEGKPLPIYGNGSNIRDWLHVSDHCRALLQVIEQGRPGETYNVGGGSERTNRDVVGLICDTLDKAFAGEPGLAARFPECPATKSQSCRSLITYVTDRPGHDHRYAIDASKLARELDHRCSVDFDGGLNQTIRWYLDHPEWWREVTSGAYQAWIQQNYAFRIAV

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
43 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
97 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
100 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
105 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
154 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
155 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
161 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
166 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
167 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
168 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
169 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
170 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
171 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
172 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
173 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
174 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
175 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
176 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
177 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
178 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
181 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
182 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
183 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
184 2928058823 Ralstonia sp. 1138 Isolate Unclassified
185 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
186 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
187 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
188 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.05
Metatranscriptomes 2.38
Isolates 3.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.68
Nodule 1.59
Rhizoplane 3.17
Rhizosphere 72.62
Stem 0
Stem Tuber 0
Unclassified 0.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10138135 3300009093 Bacteria 2916
2 JGI24739J22299_10009011 3300001989 Bacteria 3724
3 rootH1_10068750 3300003323 Viruses 12948
4 Ga0065715_10095158 3300005293 Bacteria 4149
5 Ga0065707_10184535 3300005295 Bacteria 1397
6 Ga0070658_10186388 3300005327 Bacteria 1748
7 Ga0070683_100000288 3300005329 Bacteria 34747
8 Ga0070683_100282519 3300005329 Bacteria 1579
9 Ga0068868_100007096 3300005338 Bacteria 7964
10 Ga0068868_100009440 3300005338 Bacteria 7021
11 Ga0068868_100210652 3300005338 Bacteria 1624
12 Ga0070660_100110637 3300005339 Bacteria 2185
13 Ga0070689_100068695 3300005340 Bacteria 2764
14 Ga0070661_100065038 3300005344 Bacteria 2680
15 Ga0070668_100016656 3300005347 Bacteria 5494
16 Ga0070671_100188705 3300005355 Bacteria 1747
17 Ga0070659_100004611 3300005366 Bacteria 9844
18 Ga0070659_100007731 3300005366 Bacteria 7815
19 Ga0070705_100000944 3300005440 Bacteria 16280
20 Ga0070662_100094874 3300005457 Bacteria 2247
21 Ga0068867_100131343 3300005459 Bacteria 1946
22 Ga0070679_100232918 3300005530 Bacteria 1801
23 Ga0070684_100000368 3300005535 Bacteria 31049
24 Ga0070684_100277665 3300005535 Bacteria 1535
25 Ga0068853_100067009 3300005539 Bacteria 3118
26 Ga0068853_100127627 3300005539 Bacteria 2274
27 Ga0070672_100049676 3300005543 Bacteria 3265
28 Ga0070672_100112047 3300005543 Bacteria 2225
29 Ga0070686_100155956 3300005544 Bacteria 1603
30 Ga0070696_100077878 3300005546 Bacteria 2343
31 Ga0070665_100026648 3300005548 Bacteria 5820
32 Ga0070665_100053119 3300005548 Bacteria 4064
33 Ga0070704_100138877 3300005549 Bacteria 1895
34 Ga0068855_100147518 3300005563 Bacteria 2677
35 Ga0068855_100243850 3300005563 Bacteria 2007
36 Ga0070664_100040985 3300005564 Bacteria 3906
37 Ga0068857_100025480 3300005577 Bacteria 5208
38 Ga0068857_100096330 3300005577 Bacteria 2652
39 Ga0068854_100000125 3300005578 Bacteria 52611
40 Ga0068854_100007240 3300005578 Bacteria 7084
41 Ga0068856_100018145 3300005614 Bacteria 6822
42 Ga0068859_100193034 3300005617 Bacteria 2121
43 Ga0068866_10184516 3300005718 Bacteria 1235
44 Ga0068851_10007140 3300005834 Bacteria 5118
45 Ga0068863_100094912 3300005841 Bacteria 2831
46 Ga0068860_100204906 3300005843 Bacteria 1912
47 Ga0081538_10000390 3300005981 Bacteria 49831
48 Ga0081538_10013421 3300005981 Bacteria 6487
49 Ga0081540_1004485 3300005983 Bacteria 10617
50 Ga0075365_10000349 3300006038 Bacteria 16542
51 Ga0075365_10043295 3300006038 Bacteria 2948
52 Ga0075364_10001743 3300006051 Bacteria 11994
53 Ga0075364_10043519 3300006051 Bacteria 2920
54 Ga0070716_100033820 3300006173 Bacteria 2799
55 Ga0075367_10031245 3300006178 Bacteria 3057
56 Ga0075367_10079020 3300006178 Bacteria 1987
57 Ga0075369_10000646 3300006186 Eukaryota 11095
58 Ga0075427_10005179 3300006194 Bacteria 1851
59 Ga0075370_10004109 3300006353 Bacteria 7012
60 Ga0075370_10032047 3300006353 Bacteria 2936
61 Ga0075429_100008541 3300006880 Bacteria 8910
62 Ga0097620_100193032 3300006931 Bacteria 2121
63 Ga0105240_10000920 3300009093 Bacteria 52419
64 Ga0105240_10002234 3300009093 Bacteria 31502
65 Ga0105240_10091174 3300009093 Bacteria 3724
66 Ga0111539_10837362 3300009094 Bacteria 1070
67 Ga0105245_10111305 3300009098 Bacteria 2546
68 Ga0114129_10009848 3300009147 Bacteria 13632
69 Ga0114129_10088457 3300009147 Bacteria 4294
70 Ga0105243_10048630 3300009148 Bacteria 3344
71 Ga0105243_10306572 3300009148 Bacteria 1441
72 Ga0105241_10000488 3300009174 Bacteria 29914
73 Ga0105242_10208925 3300009176 Bacteria 1738
74 Ga0105248_10014834 3300009177 Bacteria 8582
75 Ga0105248_10022586 3300009177 Bacteria 6982
76 Ga0105237_10020362 3300009545 Bacteria 6841
77 Ga0105237_10069194 3300009545 Bacteria 3525
78 Ga0105238_10073332 3300009551 Bacteria 3418
79 Ga0105238_10252959 3300009551 Bacteria 1740
80 Ga0105238_10287773 3300009551 Bacteria 1625
81 Ga0105239_10017716 3300010375 Bacteria 7880
82 Ga0105239_10060428 3300010375 Bacteria 4160
83 Ga0105239_10072124 3300010375 Bacteria 3795
84 Ga0105239_10105926 3300010375 Bacteria 3114
85 Ga0105239_10232536 3300010375 Bacteria 2068
86 Ga0105246_10036231 3300011119 Bacteria 3304
87 Ga0157373_10008558 3300013100 Bacteria 7599
88 Ga0157369_10000896 3300013105 Bacteria 38031
89 Ga0157374_10069623 3300013296 Bacteria 3313
90 Ga0157378_10002926 3300013297 Bacteria 15188
91 Ga0163162_10247045 3300013306 Bacteria 1916
92 Ga0157379_10029425 3300014968 Bacteria 4885
93 Ga0157376_10079029 3300014969 Bacteria 2819
94 Ga0206356_10944325 3300020070 Bacteria 2866
95 Ga0206351_10189037 3300020077 Bacteria 31186
96 Ga0206350_10942727 3300020080 Bacteria 1630
97 Ga0154015_1384786 3300020610 Bacteria 30627
98 Ga0213876_10001925 3300021384 Bacteria 12443
99 Ga0213875_10000002 3300021388 Bacteria 921066
100 Ga0224712_10006837 3300022467 Bacteria 3284
101 Ga0209563_102555 3300025230 Bacteria 4082
102 Ga0209233_1009152 3300025261 Bacteria 3027
103 Ga0207647_10001746 3300025904 Bacteria 16665
104 Ga0207643_10132587 3300025908 Bacteria 1484
105 Ga0207654_10000136 3300025911 Bacteria 47311
106 Ga0207707_10027712 3300025912 Bacteria 4955
107 Ga0207695_10000301 3300025913 Bacteria 121221
108 Ga0207695_10000785 3300025913 Bacteria 59941
109 Ga0207695_10001209 3300025913 Bacteria 44290
110 Ga0207695_10260519 3300025913 Bacteria 1632
111 Ga0207657_10250577 3300025919 Bacteria 1412
112 Ga0207694_10000206 3300025924 Bacteria 58137
113 Ga0207690_10004937 3300025932 Bacteria 7871
114 Ga0207665_10086652 3300025939 Bacteria 2164
115 Ga0207691_10060877 3300025940 Bacteria 3430
116 Ga0207691_10106153 3300025940 Bacteria 2502
117 Ga0207691_10158491 3300025940 Bacteria 1987
118 Ga0207711_10008517 3300025941 Bacteria 8581
119 Ga0207711_10420655 3300025941 Bacteria 1243
120 Ga0207661_10001324 3300025944 Bacteria 16580
121 Ga0207661_10021033 3300025944 Bacteria 4886
122 Ga0207679_10116712 3300025945 Bacteria 2117
123 Ga0207667_10057153 3300025949 Bacteria 4096
124 Ga0207640_10000062 3300025981 Bacteria 88964
125 Ga0207640_10032973 3300025981 Bacteria 3217
126 Ga0207639_10005846 3300026041 Bacteria 8335
127 Ga0207639_10012409 3300026041 Bacteria 5932
128 Ga0207702_10000026 3300026078 Bacteria 186067
129 Ga0207641_10011567 3300026088 Bacteria 7243
130 Ga0207674_10061589 3300026116 Bacteria 3791
131 Ga0207674_10062010 3300026116 Bacteria 3777
132 Ga0209813_10016029 3300027866 Bacteria 2039
133 Ga0268266_10043320 3300028379 Bacteria 3846
134 Ga0268266_10048724 3300028379 Bacteria 3632
135 Ga0265338_10023842 3300028800 Bacteria 6274
136 Ga0307511_10140089 3300030521 Bacteria 1425
137 Ga0265330_10000463 3300031235 Bacteria 27119
138 Ga0265325_10048216 3300031241 Bacteria 2202
139 Ga0265329_10000779 3300031242 Bacteria 16185
140 Ga0265340_10035119 3300031247 Bacteria 2490
141 Ga0265339_10044786 3300031249 Bacteria 2439
142 Ga0265339_10133240 3300031249 Bacteria 1269
143 Ga0265331_10066174 3300031250 Bacteria 1698
144 Ga0265316_10000009 3300031344 Bacteria 244484
145 Ga0265316_10090963 3300031344 Bacteria 2328
146 Ga0265316_10153212 3300031344 Bacteria 1726
147 Ga0265313_10010802 3300031595 Bacteria 5734
148 Ga0307508_10000630 3300031616 Bacteria 42376
149 Ga0307508_10009601 3300031616 Bacteria 8890
150 Ga0307508_10025740 3300031616 Bacteria 5333
151 Ga0265314_10000853 3300031711 Bacteria 36206
152 Ga0265314_10090385 3300031711 Bacteria 1994
153 Ga0265342_10000251 3300031712 Bacteria 60239
154 Ga0307413_10001653 3300031824 Bacteria 8653
155 Ga0307410_10027260 3300031852 Bacteria 3609
156 Ga0307406_10073231 3300031901 Bacteria 2252
157 Ga0307406_10174862 3300031901 Bacteria 1557
158 Ga0307416_100206579 3300032002 Bacteria 1869
159 Ga0307411_10010411 3300032005 Bacteria 4956
160 Ga0307415_100190180 3300032126 Bacteria 1619
161 Ga0373947_0073706 3300035725 Bacteria 2099
162 Ga0373925_0148476 3300037068 Bacteria 1839
163 Ga0395898_0238637 3300037466 Bacteria 1734
164 Ga0436365_1815864 3300039437 Bacteria 3901
165 Ga0436365_1838882 3300039437 Bacteria 55130
166 Ga0436361_0207917 3300039447 Unclassified 4112
167 Ga0436361_0389163 3300039447 Bacteria 1410
168 Ga0451841_0136988 3300041498 Bacteria 1568
169 Ga0451577_0033850 3300042876 Bacteria 4607
170 Ga0466972_0000341 3300044658 Bacteria 25784
171 Ga0466982_0097606 3300044672 Bacteria 1820
172 Ga0453684_0000425 3300044712 Viruses 172269
173 Ga0453684_0002362 3300044712 Bacteria 46123
174 Ga0453684_0032675 3300044712 Bacteria 7274
175 Ga0453684_0064520 3300044712 Bacteria 4678
176 Ga0453684_0127952 3300044712 Bacteria 3053
177 Ga0453684_0155766 3300044712 Bacteria 2709
178 Ga0453684_0289529 3300044712 Bacteria 1865
179 Ga0453684_0455770 3300044712 Bacteria 1423
180 Ga0466960_0016629 3300044901 Bacteria 3195
181 Ga0451576_0037900 3300045051 Bacteria 5104
182 Ga0451576_0443983 3300045051 Bacteria 1362
183 Ga0495629_0031898 3300046459 Bacteria 3731
184 Ga0495664_0033671 3300046477 Bacteria 3012
185 Ga0495630_0003342 3300046517 Bacteria 11168
186 Ga0495642_0010280 3300046528 Bacteria 3584
187 Ga0495625_0333170 3300046660 Bacteria 963
188 Ga0495658_0321464 3300046683 Bacteria 981
189 Ga0495613_0087628 3300046689 Bacteria 2256
190 Ga0495604_0241946 3300047317 Unclassified 1233
191 Ga0495674_0014315 3300047319 Bacteria 7428
192 Ga0495675_0001666 3300047444 Bacteria 13305
193 Ga0496100_0132142 3300048903 Bacteria 1759
194 Ga0496102_0041257 3300048905 Bacteria 4177
195 Ga0496105_0095856 3300048908 Bacteria 2450
196 Ga0496106_0001723 3300048909 Bacteria 16311
197 Ga0496106_0084977 3300048909 Bacteria 2436
198 Ga0496108_0177039 3300048911 Bacteria 1847
199 Ga0496114_0517266 3300048917 Bacteria 1055
200 Ga0496115_0014994 3300048918 Bacteria 5874
201 Ga0496117_0016688 3300048920 Bacteria 6178
202 Ga0496118_0027287 3300048921 Bacteria 4837
203 Ga0496121_0003087 3300048924 Bacteria 24109
204 Ga0496124_0008891 3300048927 Bacteria 10417
205 Ga0496126_0005136 3300048929 Bacteria 15157
206 Ga0501036_0108309 3300049572 Bacteria 2349
207 Ga0501071_0016900 3300049587 Bacteria 5021
208 Ga0501072_0056587 3300049588 Bacteria 3090
209 Ga0501074_0074733 3300049590 Bacteria 2433
210 Ga0501077_0058284 3300049593 Bacteria 2451
211 Ga0501243_004165 3300049675 Bacteria 2163
212 Ga0501083_0071551 3300049744 Bacteria 2306
213 nmdc:mga03683_29272_c1 3300050489 Bacteria 2195
214 nmdc:mga03n38_31684_c1 3300050490 Bacteria 2233
215 nmdc:mga00v17_35580_c1 3300050491 Bacteria 2965
216 nmdc:mga00v17_858_c1 3300050491 Bacteria 16444
217 nmdc:mga0yw44_323_c1 3300050492 Bacteria 16681
218 nmdc:mga0yw44_35541_c1 3300050492 Bacteria 2929
219 nmdc:mga06z11_20619_c1 3300050494 Bacteria 3049
220 nmdc:mga06z11_26534_c1 3300050494 Bacteria 2757
221 nmdc:mga04h51_17614_c1 3300050495 Bacteria 2092
222 nmdc:mga04h51_1833_c1 3300050495 Bacteria 4970
223 nmdc:mga07m45_31592_c1 3300050496 Bacteria 2935
224 nmdc:mga05p37_40589_c1 3300050507 Bacteria 5715
225 nmdc:mga05p37_541685_c1 3300050507 Bacteria 1327
226 nmdc:mga09592_7400_c1 3300050508 Bacteria 8924
227 nmdc:mga08x19_20512_c1 3300050514 Bacteria 4069
228 nmdc:mga0sz30_13979_c2 3300050516 Bacteria 2501
229 nmdc:mga0sz30_47_c1 3300050516 Eukaryota 14112
230 Ga0500566_0000182 3300053094 Bacteria 32344
231 Ga0500608_006553 3300053122 Bacteria 4751
232 Ga0500559_0024754 3300053136 Bacteria 2555
233 Ga0500568_0056462 3300053139 Bacteria 1530
234 Ga0500573_0030210 3300053140 Bacteria 3125
235 Ga0500590_110121 3300053148 Bacteria 1308
236 Ga0500604_0011272 3300053151 Bacteria 2399
237 Ga0500627_0008708 3300053158 Bacteria 3621
238 Ga0500630_031513 3300053159 Bacteria 2603
239 Ga0500639_021337 3300053163 Bacteria 3421
240 Ga0500636_0085131 3300053177 Bacteria 1816
241 Ga0500596_001304 3300053735 Bacteria 5039
242 Ga0587072_001362 3300059643 Bacteria 2994
243 Ga0501082_0057016 3300060353 Bacteria 3366
244 2595317867 2593339198 Bacteria 7267884
245 2723847445 2721755755 Bacteria 8322773
246 2912727464 2912723979 Bacteria 8557534
247 2922388657 2922386360 Bacteria 7017218
248 2928063406 2928058823 Bacteria 5520022
249 2935979788 2935975950 Bacteria 8347125
250 8019673714 8019668869 Bacteria 8791617
251 8055072474 8055066027 Bacteria 9479577
252 8056064637 8056060235 Bacteria 7259403
253 Ga0105240_10138135
254 JGI24739J22299_10009011
255 rootH1_10068750
256 Ga0065715_10095158
257 Ga0065707_10184535
258 Ga0070658_10186388
259 Ga0070683_100000288
260 Ga0070683_100282519
261 Ga0068868_100007096
262 Ga0068868_100009440
263 Ga0068868_100210652
264 Ga0070660_100110637
265 Ga0070689_100068695
266 Ga0070661_100065038
267 Ga0070668_100016656
268 Ga0070671_100188705
269 Ga0070659_100004611
270 Ga0070659_100007731
271 Ga0070705_100000944
272 Ga0070662_100094874
273 Ga0068867_100131343
274 Ga0070679_100232918
275 Ga0070684_100000368
276 Ga0070684_100277665
277 Ga0068853_100067009
278 Ga0068853_100127627
279 Ga0070672_100049676
280 Ga0070672_100112047
281 Ga0070686_100155956
282 Ga0070696_100077878
283 Ga0070665_100026648
284 Ga0070665_100053119
285 Ga0070704_100138877
286 Ga0068855_100147518
287 Ga0068855_100243850
288 Ga0070664_100040985
289 Ga0068857_100025480
290 Ga0068857_100096330
291 Ga0068854_100000125
292 Ga0068854_100007240
293 Ga0068856_100018145
294 Ga0068859_100193034
295 Ga0068866_10184516
296 Ga0068851_10007140
297 Ga0068863_100094912
298 Ga0068860_100204906
299 Ga0081538_10000390
300 Ga0081538_10013421
301 Ga0081540_1004485
302 Ga0075365_10000349
303 Ga0075365_10043295
304 Ga0075364_10001743
305 Ga0075364_10043519
306 Ga0070716_100033820
307 Ga0075367_10031245
308 Ga0075367_10079020
309 Ga0075369_10000646
310 Ga0075427_10005179
311 Ga0075370_10004109
312 Ga0075370_10032047
313 Ga0075429_100008541
314 Ga0097620_100193032
315 Ga0105240_10000920
316 Ga0105240_10002234
317 Ga0105240_10091174
318 Ga0111539_10837362
319 Ga0105245_10111305
320 Ga0114129_10009848
321 Ga0114129_10088457
322 Ga0105243_10048630
323 Ga0105243_10306572
324 Ga0105241_10000488
325 Ga0105242_10208925
326 Ga0105248_10014834
327 Ga0105248_10022586
328 Ga0105237_10020362
329 Ga0105237_10069194
330 Ga0105238_10073332
331 Ga0105238_10252959
332 Ga0105238_10287773
333 Ga0105239_10017716
334 Ga0105239_10060428
335 Ga0105239_10072124
336 Ga0105239_10105926
337 Ga0105239_10232536
338 Ga0105246_10036231
339 Ga0157373_10008558
340 Ga0157369_10000896
341 Ga0157374_10069623
342 Ga0157378_10002926
343 Ga0163162_10247045
344 Ga0157379_10029425
345 Ga0157376_10079029
346 Ga0206356_10944325
347 Ga0206351_10189037
348 Ga0206350_10942727
349 Ga0154015_1384786
350 Ga0213876_10001925
351 Ga0213875_10000002
352 Ga0224712_10006837
353 Ga0209563_102555
354 Ga0209233_1009152
355 Ga0207647_10001746
356 Ga0207643_10132587
357 Ga0207654_10000136
358 Ga0207707_10027712
359 Ga0207695_10000301
360 Ga0207695_10000785
361 Ga0207695_10001209
362 Ga0207695_10260519
363 Ga0207657_10250577
364 Ga0207694_10000206
365 Ga0207690_10004937
366 Ga0207665_10086652
367 Ga0207691_10060877
368 Ga0207691_10106153
369 Ga0207691_10158491
370 Ga0207711_10008517
371 Ga0207711_10420655
372 Ga0207661_10001324
373 Ga0207661_10021033
374 Ga0207679_10116712
375 Ga0207667_10057153
376 Ga0207640_10000062
377 Ga0207640_10032973
378 Ga0207639_10005846
379 Ga0207639_10012409
380 Ga0207702_10000026
381 Ga0207641_10011567
382 Ga0207674_10061589
383 Ga0207674_10062010
384 Ga0209813_10016029
385 Ga0268266_10043320
386 Ga0268266_10048724
387 Ga0265338_10023842
388 Ga0307511_10140089
389 Ga0265330_10000463
390 Ga0265325_10048216
391 Ga0265329_10000779
392 Ga0265340_10035119
393 Ga0265339_10044786
394 Ga0265339_10133240
395 Ga0265331_10066174
396 Ga0265316_10000009
397 Ga0265316_10090963
398 Ga0265316_10153212
399 Ga0265313_10010802
400 Ga0307508_10000630
401 Ga0307508_10009601
402 Ga0307508_10025740
403 Ga0265314_10000853
404 Ga0265314_10090385
405 Ga0265342_10000251
406 Ga0307413_10001653
407 Ga0307410_10027260
408 Ga0307406_10073231
409 Ga0307406_10174862
410 Ga0307416_100206579
411 Ga0307411_10010411
412 Ga0307415_100190180
413 Ga0373947_0073706
414 Ga0373925_0148476
415 Ga0395898_0238637
416 Ga0436365_1815864
417 Ga0436365_1838882
418 Ga0436361_0207917
419 Ga0436361_0389163
420 Ga0451841_0136988
421 Ga0451577_0033850
422 Ga0466972_0000341
423 Ga0466982_0097606
424 Ga0453684_0000425
425 Ga0453684_0002362
426 Ga0453684_0032675
427 Ga0453684_0064520
428 Ga0453684_0127952
429 Ga0453684_0155766
430 Ga0453684_0289529
431 Ga0453684_0455770
432 Ga0466960_0016629
433 Ga0451576_0037900
434 Ga0451576_0443983
435 Ga0495629_0031898
436 Ga0495664_0033671
437 Ga0495630_0003342
438 Ga0495642_0010280
439 Ga0495625_0333170
440 Ga0495658_0321464
441 Ga0495613_0087628
442 Ga0495604_0241946
443 Ga0495674_0014315
444 Ga0495675_0001666
445 Ga0496100_0132142
446 Ga0496102_0041257
447 Ga0496105_0095856
448 Ga0496106_0001723
449 Ga0496106_0084977
450 Ga0496108_0177039
451 Ga0496114_0517266
452 Ga0496115_0014994
453 Ga0496117_0016688
454 Ga0496118_0027287
455 Ga0496121_0003087
456 Ga0496124_0008891
457 Ga0496126_0005136
458 Ga0501036_0108309
459 Ga0501071_0016900
460 Ga0501072_0056587
461 Ga0501074_0074733
462 Ga0501077_0058284
463 Ga0501243_004165
464 Ga0501083_0071551
465 nmdc:mga03683_29272_c1
466 nmdc:mga03n38_31684_c1
467 nmdc:mga00v17_35580_c1
468 nmdc:mga00v17_858_c1
469 nmdc:mga0yw44_323_c1
470 nmdc:mga0yw44_35541_c1
471 nmdc:mga06z11_20619_c1
472 nmdc:mga06z11_26534_c1
473 nmdc:mga04h51_17614_c1
474 nmdc:mga04h51_1833_c1
475 nmdc:mga07m45_31592_c1
476 nmdc:mga05p37_40589_c1
477 nmdc:mga05p37_541685_c1
478 nmdc:mga09592_7400_c1
479 nmdc:mga08x19_20512_c1
480 nmdc:mga0sz30_13979_c2
481 nmdc:mga0sz30_47_c1
482 Ga0500566_0000182
483 Ga0500608_006553
484 Ga0500559_0024754
485 Ga0500568_0056462
486 Ga0500573_0030210
487 Ga0500590_110121
488 Ga0500604_0011272
489 Ga0500627_0008708
490 Ga0500630_031513
491 Ga0500639_021337
492 Ga0500636_0085131
493 Ga0500596_001304
494 Ga0587072_001362
495 Ga0501082_0057016
496 2595317867
497 2723847445
498 2912727464
499 2922388657
500 2928063406
501 2935979788
502 8019673714
503 8055072474
504 8056064637

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

34

281

0.95

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

35

367

0.86

PF04321

RmlD_sub_bind

RmlD substrate binding domain

31

302

0.82

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

34

169

0.8

PF07993

NAD_binding_4

Male sterility protein

36

228

0.79

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

35

267

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bi4-assembly2.cif.gz_B 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9776 1 350
6bi4-assembly2.cif.gz_C 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9758 1 350
6bi4-assembly2.cif.gz_B 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9714 1 350
6bi4-assembly2.cif.gz_C 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9696 1 350
2hun-assembly1.cif.gz_B crystal structure of hypothetical protein ph0414 from pyrococcus horikoshii ot3 0.9616 2 350
ID Description Score Start End Superfamily
4egbB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9493 3 326 3.40.50.720
af_Q10062_1_488_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9478 3 35 3.50.50.60
2p5yA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.947 3 251 3.40.50.720
4egbB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9404 3 326 3.40.50.720
4zrnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9387 3 251 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2X1PPC2-F1-model_v4 dTDP-glucose 46-dehydratase (EC 4.2.1.46) 0.9963 182 274 GO:0008460
AF-A0A3C1VQ02-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9805 159 356
AF-A0A662PL15-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9783 183 347
AF-A0A5C8ALB0-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9777 3 191
AF-A0A1N7GDE5-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9766 3 339 GO:0008460
GO:0009225

Map