F363114

General Info

Members Datasets Scaffolds Average Seq Length
252 159 252 538

Family's Representative Sequence

Representative Sequence 3300005844|Ga0068862_100033366|Ga0068862_1000333664
Length 593
Sequence MVSPIVIANYYAFLFMECLVIVRFVMLIFPIVKSPVVFRYPTAPISINLVTDLPKSTTLKNIMFLFILFFGIKTVISQPLNDTTGKLIAQKENVIKAETIIKIENLGPKVNTEYPELRPTVSADGNILFFICENHPENTKYNSIRNSQDIWYSVRDRSGKWREAMHMPYPLNTYFYNAVFWISPDNNRILIRNAYIDGDYVGNGVSMSYLDKDGYWSKPQMLRIKNYQKYDRGRQNGATMAHDGQTLLLYMSPEKNGYNNEIYVCFLEKDGTWTEPKSLGKKINLPDYDEMTPYLASDGVTLYFSSNRPGTIGDNDIWMTKRLDSTWTKWSDPVNLGEPINTPDWDAFFTLDAGGEYAYLTNSVDTYGESDIVRVKLLEREKPDPVILVSGNVYNKKTNEPLSASLIYETLPDGVETGNAVSNPTDGAFKIVLPYDQNYMIRATADKFFAQSENFNLDSLVKAGYKEIHKDLYLVPIEVGQVVRLNNVFFDFDKWDLRAESHLELNRVVKLLEENPAIEIEMSAHTDSYGSDEYNFKLSDNRARSVMEYIISKGISPSRIRSQGYGETKPVALNDTPENRQLNRRVEFTILKN

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
108 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
113 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
114 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
115 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
116 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
117 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
118 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
119 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
132 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
141 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
142 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
143 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
144 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
145 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
146 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
147 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
148 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
157 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
158 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
159 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.17
Nodule 0
Rhizoplane 0
Rhizosphere 93.25
Stem 0
Stem Tuber 0
Unclassified 3.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10202167 3300003322 Unclassified 2839
2 rootH1_10026142 3300003323 Bacteria 62137
3 rootH1_10180447 3300003323 Bacteria 2802
4 Ga0065714_10066997 3300005288 Bacteria 6019
5 Ga0065712_10013288 3300005290 Bacteria 2664
6 Ga0070658_10097497 3300005327 Bacteria 2428
7 Ga0070676_10019135 3300005328 Bacteria 3806
8 Ga0070683_100001238 3300005329 Bacteria 19432
9 Ga0070683_100003526 3300005329 Bacteria 12736
10 Ga0070683_100009324 3300005329 Bacteria 8388
11 Ga0070690_100065512 3300005330 Bacteria 2349
12 Ga0070670_100020375 3300005331 Bacteria 5700
13 Ga0070670_100046957 3300005331 Bacteria 3715
14 Ga0070670_100077244 3300005331 Bacteria 2861
15 Ga0070670_100106244 3300005331 Bacteria 2419
16 Ga0070670_100145492 3300005331 Bacteria 2050
17 Ga0068869_100013137 3300005334 Bacteria 5499
18 Ga0068869_100031860 3300005334 Bacteria 3712
19 Ga0068869_100043205 3300005334 Bacteria 3236
20 Ga0068869_100071541 3300005334 Bacteria 2568
21 Ga0070682_100016553 3300005337 Bacteria 4289
22 Ga0070689_100003681 3300005340 Bacteria 10236
23 Ga0070689_100009655 3300005340 Bacteria 6846
24 Ga0070689_100027293 3300005340 Bacteria 4304
25 Ga0070661_100006927 3300005344 Bacteria 7823
26 Ga0070669_100018709 3300005353 Bacteria 4951
27 Ga0070675_100016992 3300005354 Bacteria 5781
28 Ga0070675_100017962 3300005354 Bacteria 5627
29 Ga0070675_100032190 3300005354 Bacteria 4242
30 Ga0070675_100060709 3300005354 Bacteria 3121
31 Ga0070671_100056647 3300005355 Bacteria 3261
32 Ga0070673_100011331 3300005364 Bacteria 6082
33 Ga0070688_100005751 3300005365 Bacteria 6554
34 Ga0070659_100019566 3300005366 Bacteria 5133
35 Ga0070659_100032831 3300005366 Bacteria 4030
36 Ga0070667_100014740 3300005367 Bacteria 6458
37 Ga0070678_100102606 3300005456 Bacteria 2220
38 Ga0070662_100144841 3300005457 Bacteria 1845
39 Ga0068867_100013086 3300005459 Bacteria 5873
40 Ga0070685_10002606 3300005466 Bacteria 9240
41 Ga0070685_10009842 3300005466 Bacteria 4957
42 Ga0070698_100002200 3300005471 Bacteria 21650
43 Ga0070698_100005961 3300005471 Bacteria 13285
44 Ga0070698_100007970 3300005471 Bacteria 11457
45 Ga0070679_100013827 3300005530 Bacteria 7733
46 Ga0070684_100004827 3300005535 Bacteria 10298
47 Ga0070684_100011027 3300005535 Bacteria 7189
48 Ga0068853_100021570 3300005539 Bacteria 5373
49 Ga0068853_100031535 3300005539 Bacteria 4483
50 Ga0070672_100043473 3300005543 Bacteria 3465
51 Ga0068855_100086340 3300005563 Bacteria 3628
52 Ga0070664_100000624 3300005564 Bacteria 27096
53 Ga0070664_100014873 3300005564 Bacteria 6350
54 Ga0068857_100010207 3300005577 Bacteria 8165
55 Ga0068857_100151198 3300005577 Bacteria 2103
56 Ga0068856_100087759 3300005614 Bacteria 3092
57 Ga0068852_100005358 3300005616 Bacteria 9167
58 Ga0068852_100109927 3300005616 Bacteria 2504
59 Ga0068852_100116209 3300005616 Bacteria 2440
60 Ga0068859_100011345 3300005617 Bacteria 8965
61 Ga0068864_100055047 3300005618 Bacteria 3434
62 Ga0068861_100017838 3300005719 Bacteria 5044
63 Ga0068863_100012778 3300005841 Bacteria 8097
64 Ga0068863_100023683 3300005841 Bacteria 5859
65 Ga0068863_100031194 3300005841 Bacteria 5088
66 Ga0068860_100017837 3300005843 Bacteria 6912
67 Ga0068860_100179099 3300005843 Bacteria 2049
68 Ga0068862_100033366 3300005844 Bacteria 4351
69 Ga0068862_100063972 3300005844 Unclassified 3166
70 Ga0075366_10030921 3300006195 Bacteria 3149
71 Ga0075366_10040488 3300006195 Unclassified 2756
72 Ga0075366_10048734 3300006195 Bacteria 2513
73 Ga0097621_100000018 3300006237 Bacteria 88867
74 Ga0068871_100001846 3300006358 Bacteria 14315
75 Ga0068871_100120240 3300006358 Bacteria 2218
76 Ga0075428_100089568 3300006844 Bacteria 3356
77 Ga0075431_100014048 3300006847 Bacteria 8092
78 Ga0075431_100028149 3300006847 Bacteria 5770
79 Ga0075434_100052847 3300006871 Unclassified 4037
80 Ga0075429_100021757 3300006880 Bacteria 5560
81 Ga0075429_100063566 3300006880 Bacteria 3215
82 Ga0097620_100011345 3300006931 Bacteria 8965
83 Ga0111539_10030193 3300009094 Bacteria 6591
84 Ga0111539_10201055 3300009094 Bacteria 2324
85 Ga0105247_10002755 3300009101 Bacteria 11769
86 Ga0114129_10003859 3300009147 Bacteria 21141
87 Ga0105241_10021867 3300009174 Bacteria 4734
88 Ga0105241_10081487 3300009174 Unclassified 2535
89 Ga0105242_10014439 3300009176 Bacteria 6120
90 Ga0105248_10025311 3300009177 Bacteria 6598
91 Ga0105248_10284981 3300009177 Unclassified 1860
92 Ga0105237_10047240 3300009545 Bacteria 4328
93 Ga0105249_10003283 3300009553 Bacteria 14021
94 Ga0105249_10003620 3300009553 Bacteria 13359
95 Ga0105249_10033606 3300009553 Bacteria 4645
96 Ga0105249_10088490 3300009553 Bacteria 2892
97 Ga0105249_10148895 3300009553 Bacteria 2251
98 Ga0105239_10002120 3300010375 Bacteria 25598
99 Ga0157373_10002565 3300013100 Bacteria 13803
100 Ga0157374_10012809 3300013296 Bacteria 7303
101 Ga0157374_10029817 3300013296 Bacteria 4947
102 Ga0157378_10007394 3300013297 Bacteria 9595
103 Ga0157378_10009005 3300013297 Bacteria 8691
104 Ga0163162_10018838 3300013306 Bacteria 6767
105 Ga0163162_10052603 3300013306 Bacteria 4090
106 Ga0163162_10063969 3300013306 Bacteria 3723
107 Ga0163162_10075780 3300013306 Bacteria 3425
108 Ga0163162_10136941 3300013306 Bacteria 2560
109 Ga0157372_10011450 3300013307 Bacteria 9430
110 Ga0157372_10078663 3300013307 Bacteria 3727
111 Ga0157372_10240816 3300013307 Bacteria 2099
112 Ga0157375_10000190 3300013308 Bacteria 57567
113 Ga0157375_10026629 3300013308 Bacteria 5393
114 Ga0157375_10027768 3300013308 Bacteria 5295
115 Ga0157375_10093991 3300013308 Bacteria 3066
116 Ga0163163_10000596 3300014325 Bacteria 31583
117 Ga0163163_10001289 3300014325 Bacteria 21169
118 Ga0163163_10037106 3300014325 Bacteria 4739
119 Ga0163163_10113253 3300014325 Bacteria 2743
120 Ga0163163_10197864 3300014325 Unclassified 2058
121 Ga0157380_10047222 3300014326 Bacteria 3386
122 Ga0157377_10006525 3300014745 Bacteria 5570
123 Ga0157379_10026753 3300014968 Bacteria 5135
124 Ga0157376_10002526 3300014969 Bacteria 12400
125 Ga0157376_10071318 3300014969 Bacteria 2952
126 Ga0157376_10103943 3300014969 Bacteria 2488
127 Ga0163161_10004795 3300017792 Bacteria 9419
128 Ga0163161_10060141 3300017792 Bacteria 2764
129 Ga0207710_10001798 3300025900 Bacteria 10353
130 Ga0207647_10005311 3300025904 Bacteria 9465
131 Ga0207647_10042725 3300025904 Bacteria 2841
132 Ga0207645_10014677 3300025907 Bacteria 5230
133 Ga0207645_10038420 3300025907 Bacteria 3070
134 Ga0207707_10044007 3300025912 Bacteria 3893
135 Ga0207695_10012546 3300025913 Bacteria 10156
136 Ga0207671_10035543 3300025914 Bacteria 3696
137 Ga0207671_10140438 3300025914 Unclassified 1861
138 Ga0207652_10120892 3300025921 Bacteria 2330
139 Ga0207650_10018419 3300025925 Bacteria 4901
140 Ga0207650_10026605 3300025925 Bacteria 4129
141 Ga0207659_10014134 3300025926 Bacteria 5140
142 Ga0207659_10020929 3300025926 Bacteria 4332
143 Ga0207644_10025010 3300025931 Bacteria 4102
144 Ga0207690_10047013 3300025932 Unclassified 2861
145 Ga0207690_10142824 3300025932 Bacteria 1766
146 Ga0207706_10174265 3300025933 Bacteria 1890
147 Ga0207686_10001610 3300025934 Bacteria 12647
148 Ga0207670_10003169 3300025936 Bacteria 8707
149 Ga0207704_10028410 3300025938 Bacteria 3103
150 Ga0207691_10016400 3300025940 Bacteria 7033
151 Ga0207691_10099893 3300025940 Bacteria 2591
152 Ga0207691_10133159 3300025940 Bacteria 2194
153 Ga0207711_10072405 3300025941 Bacteria 2994
154 Ga0207689_10003111 3300025942 Bacteria 15233
155 Ga0207689_10042235 3300025942 Bacteria 3773
156 Ga0207689_10077213 3300025942 Unclassified 2738
157 Ga0207689_10131508 3300025942 Bacteria 2060
158 Ga0207661_10000620 3300025944 Bacteria 22786
159 Ga0207661_10155422 3300025944 Bacteria 1981
160 Ga0207679_10000683 3300025945 Bacteria 22726
161 Ga0207667_10032657 3300025949 Bacteria 5605
162 Ga0207667_10044241 3300025949 Bacteria 4719
163 Ga0207651_10040332 3300025960 Bacteria 3088
164 Ga0207712_10006344 3300025961 Bacteria 7461
165 Ga0207712_10066332 3300025961 Bacteria 2580
166 Ga0207712_10090674 3300025961 Bacteria 2250
167 Ga0207639_10000970 3300026041 Bacteria 19495
168 Ga0207639_10005349 3300026041 Bacteria 8673
169 Ga0207678_10019506 3300026067 Bacteria 5957
170 Ga0207641_10080982 3300026088 Bacteria 2819
171 Ga0207641_10135697 3300026088 Bacteria 2214
172 Ga0207648_10143755 3300026089 Bacteria 2104
173 Ga0207676_10012781 3300026095 Bacteria 6024
174 Ga0207676_10020227 3300026095 Bacteria 4867
175 Ga0207676_10074118 3300026095 Bacteria 2741
176 Ga0207674_10006324 3300026116 Bacteria 13953
177 Ga0207674_10010086 3300026116 Bacteria 10741
178 Ga0207674_10062724 3300026116 Bacteria 3753
179 Ga0207674_10063977 3300026116 Bacteria 3711
180 Ga0207674_10144354 3300026116 Bacteria 2339
181 Ga0207675_100004889 3300026118 Bacteria 12921
182 Ga0207675_100112942 3300026118 Unclassified 2565
183 Ga0207698_10031456 3300026142 Bacteria 3830
184 Ga0207698_10061025 3300026142 Bacteria 2935
185 Ga0207698_10082583 3300026142 Bacteria 2598
186 Ga0268265_10058936 3300028380 Bacteria 2935
187 Ga0268264_10059612 3300028381 Unclassified 3198
188 Ga0307515_10000010 3300028794 Bacteria 651586
189 Ga0307515_10001274 3300028794 Bacteria 57313
190 Ga0265327_10000239 3300031251 Bacteria 109804
191 Ga0307513_10026700 3300031456 Bacteria 6651
192 Ga0307509_10040128 3300031507 Bacteria 5093
193 Ga0307508_10000294 3300031616 Bacteria 61066
194 Ga0307507_10154288 3300033179 Unclassified 1717
195 Ga0373955_0004198 3300035172 Bacteria 6358
196 Ga0395900_0024855 3300037418 Bacteria 6131
197 Ga0395905_0002008 3300037471 Bacteria 23233
198 Ga0395905_0011725 3300037471 Bacteria 8462
199 Ga0439436_0003142 3300041404 Bacteria 5006
200 Ga0439441_004317 3300042001 Bacteria 2148
201 Ga0439442_003273 3300042002 Bacteria 3202
202 Ga0439449_0002912 3300042007 Bacteria 6658
203 Ga0439457_000990 3300042014 Bacteria 8550
204 Ga0439462_0005461 3300042015 Bacteria 3133
205 Ga0450897_000886 3300042128 Bacteria 1861
206 Ga0466969_0000646 3300044656 Bacteria 18861
207 Ga0466972_0000028 3300044658 Bacteria 171140
208 Ga0466972_0026387 3300044658 Bacteria 2880
209 Ga0453684_0025187 3300044712 Bacteria 8648
210 Ga0466968_0018215 3300044735 Bacteria 2815
211 Ga0466957_0000587 3300044842 Bacteria 18435
212 Ga0466957_0000880 3300044842 Bacteria 15392
213 Ga0495630_0009859 3300046517 Bacteria 6878
214 Ga0495668_0000513 3300046616 Bacteria 48303
215 Ga0495657_0070031 3300046675 Bacteria 2293
216 Ga0495600_0068762 3300046809 Unclassified 2315
217 Ga0495672_0046328 3300047320 Unclassified 2594
218 Ga0495675_0037795 3300047444 Bacteria 3074
219 Ga0495686_0072075 3300047472 Bacteria 2125
220 Ga0501296_001977 3300049519 Bacteria 2099
221 Ga0501298_006827 3300049521 Bacteria 1879
222 Ga0501033_0043974 3300049570 Bacteria 3325
223 Ga0501034_0004585 3300049571 Bacteria 15306
224 Ga0501036_0049953 3300049572 Bacteria 3543
225 Ga0501037_0003748 3300049573 Bacteria 11030
226 Ga0501038_0027387 3300049574 Bacteria 5071
227 Ga0501043_0002345 3300049579 Bacteria 16053
228 Ga0501047_0020551 3300049581 Bacteria 6339
229 Ga0501047_0041442 3300049581 Bacteria 4449
230 Ga0501047_0093075 3300049581 Bacteria 2893
231 Ga0501047_0169879 3300049581 Bacteria 2050
232 Ga0501217_000029 3300049661 Bacteria 15673
233 Ga0501222_001968 3300049662 Bacteria 2847
234 Ga0501233_003226 3300049668 Bacteria 2927
235 Ga0501242_000275 3300049674 Unclassified 4185
236 Ga0501243_000550 3300049675 Bacteria 5032
237 Ga0501252_000110 3300049682 Bacteria 4716
238 Ga0501259_000683 3300049688 Bacteria 5457
239 Ga0501225_0000741 3300049705 Bacteria 10213
240 Ga0501245_000551 3300049708 Bacteria 4567
241 Ga0501035_0008753 3300049822 Bacteria 9421
242 Ga0501044_0063760 3300049823 Bacteria 3763
243 nmdc:mga0k408_46242_c1 3300050493 Bacteria 2513
244 nmdc:mga05p37_11711_c1 3300050507 Bacteria 10453
245 nmdc:mga09592_24223_c1 3300050508 Bacteria 5018
246 nmdc:mga09592_7455_c1 3300050508 Bacteria 8890
247 nmdc:mga0qj67_80203_c1 3300050509 Bacteria 2615
248 nmdc:mga08y16_117057_c1 3300050511 Bacteria 2774
249 Ga0500588_0008286 3300053146 Bacteria 2423
250 Ga0500589_010452 3300053147 Bacteria 3972
251 Ga0500604_0000736 3300053151 Bacteria 8985
252 Ga0500611_000059 3300053727 Bacteria 48867

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005331 Ga0070670_100020375 Ga0070670_1000203752 488
2 3300005334 Ga0068869_100031860 Ga0068869_1000318603 488
3 3300025925 Ga0207650_10026605 Ga0207650_100266054 488
4 3300025961 Ga0207712_10066332 Ga0207712_100663322 488
5 3300031251 Ga0265327_10000239 Ga0265327_1000023968 505
6 3300005577 Ga0068857_100151198 Ga0068857_1001511982 506
7 3300025933 Ga0207706_10174265 Ga0207706_101742651 506
8 3300026116 Ga0207674_10144354 Ga0207674_101443541 506
9 3300026142 Ga0207698_10061025 Ga0207698_100610252 506
10 3300049662 Ga0501222_001968 Ga0501222_001968_972_2576 509
11 3300049571 Ga0501034_0004585 Ga0501034_0004585_7385_9004 510
12 3300028381 Ga0268264_10059612 Ga0268264_100596122 511
13 3300005331 Ga0070670_100145492 Ga0070670_1001454921 514
14 3300005456 Ga0070678_100102606 Ga0070678_1001026061 514
15 3300009174 Ga0105241_10081487 Ga0105241_100814872 514
16 3300009177 Ga0105248_10025311 Ga0105248_100253113 514
17 3300013297 Ga0157378_10007394 Ga0157378_100073947 514
18 3300013308 Ga0157375_10000190 Ga0157375_1000019015 514
19 3300014968 Ga0157379_10026753 Ga0157379_100267531 514
20 3300014969 Ga0157376_10002526 Ga0157376_1000252613 514
21 3300031616 Ga0307508_10000294 Ga0307508_100002945 514
22 3300005354 Ga0070675_100032190 Ga0070675_1000321902 515
23 3300005457 Ga0070662_100144841 Ga0070662_1001448411 515
24 3300005459 Ga0068867_100013086 Ga0068867_1000130862 515
25 3300005543 Ga0070672_100043473 Ga0070672_1000434732 515
26 3300005616 Ga0068852_100109927 Ga0068852_1001099273 515
27 3300025940 Ga0207691_10016400 Ga0207691_100164002 515
28 3300026089 Ga0207648_10143755 Ga0207648_101437552 515
29 3300044658 Ga0466972_0000028 Ga0466972_0000028_108247_109797 515
30 3300049581 Ga0501047_0093075 Ga0501047_0093075_1333_2883 515
31 3300014325 Ga0163163_10000596 Ga0163163_1000059625 518
32 3300006358 Ga0068871_100120240 Ga0068871_1001202402 519
33 3300026142 Ga0207698_10082583 Ga0207698_100825831 519
34 3300047320 Ga0495672_0046328 Ga0495672_0046328_764_2383 519
35 3300005331 Ga0070670_100046957 Ga0070670_1000469572 520
36 3300005843 Ga0068860_100017837 Ga0068860_1000178375 520
37 3300005844 Ga0068862_100063972 Ga0068862_1000639723 520
38 3300005327 Ga0070658_10097497 Ga0070658_100974971 521
39 3300005354 Ga0070675_100016992 Ga0070675_1000169923 521
40 3300005841 Ga0068863_100023683 Ga0068863_1000236831 521
41 3300006847 Ga0075431_100014048 Ga0075431_1000140485 521
42 3300026041 Ga0207639_10005349 Ga0207639_100053494 521
43 3300028794 Ga0307515_10000010 Ga0307515_10000010237 521
44 3300049570 Ga0501033_0043974 Ga0501033_0043974_1314_2966 521
45 3300049572 Ga0501036_0049953 Ga0501036_0049953_1671_3323 521
46 3300049573 Ga0501037_0003748 Ga0501037_0003748_2672_4324 521
47 3300049574 Ga0501038_0027387 Ga0501038_0027387_2097_3749 521
48 3300049579 Ga0501043_0002345 Ga0501043_0002345_7283_8935 521
49 3300049581 Ga0501047_0020551 Ga0501047_0020551_1503_3155 521
50 3300049822 Ga0501035_0008753 Ga0501035_0008753_7272_8924 521
51 3300050508 nmdc:mga09592_24223_c1 nmdc:mga09592_24223_c1_1855_3459 521
52 3300053146 Ga0500588_0008286 Ga0500588_0008286_37_1641 521
53 3300005331 Ga0070670_100106244 Ga0070670_1001062441 522
54 3300005334 Ga0068869_100071541 Ga0068869_1000715412 522
55 3300005354 Ga0070675_100017962 Ga0070675_1000179626 522
56 3300005563 Ga0068855_100086340 Ga0068855_1000863402 522
57 3300005618 Ga0068864_100055047 Ga0068864_1000550472 522
58 3300005843 Ga0068860_100179099 Ga0068860_1001790991 522
59 3300006195 Ga0075366_10030921 Ga0075366_100309212 522
60 3300009094 Ga0111539_10201055 Ga0111539_102010552 522
61 3300009101 Ga0105247_10002755 Ga0105247_100027553 522
62 3300009147 Ga0114129_10003859 Ga0114129_1000385912 522
63 3300009553 Ga0105249_10003620 Ga0105249_100036204 522
64 3300009553 Ga0105249_10088490 Ga0105249_100884902 522
65 3300013307 Ga0157372_10011450 Ga0157372_100114502 522
66 3300014325 Ga0163163_10037106 Ga0163163_100371064 522
67 3300014969 Ga0157376_10103943 Ga0157376_101039433 522
68 3300025900 Ga0207710_10001798 Ga0207710_100017984 522
69 3300025914 Ga0207671_10035543 Ga0207671_100355432 522
70 3300025914 Ga0207671_10140438 Ga0207671_101404381 522
71 3300025926 Ga0207659_10014134 Ga0207659_100141341 522
72 3300025938 Ga0207704_10028410 Ga0207704_100284102 522
73 3300025949 Ga0207667_10044241 Ga0207667_100442412 522
74 3300025961 Ga0207712_10006344 Ga0207712_100063445 522
75 3300025961 Ga0207712_10090674 Ga0207712_100906742 522
76 3300026067 Ga0207678_10019506 Ga0207678_100195065 522
77 3300026095 Ga0207676_10074118 Ga0207676_100741182 522
78 3300026118 Ga0207675_100112942 Ga0207675_1001129422 522
79 3300026142 Ga0207698_10031456 Ga0207698_100314562 522
80 3300028380 Ga0268265_10058936 Ga0268265_100589362 522
81 3300049519 Ga0501296_001977 Ga0501296_001977_50_1654 522
82 3300049521 Ga0501298_006827 Ga0501298_006827_161_1765 522
83 3300049661 Ga0501217_000029 Ga0501217_000029_8542_10146 522
84 3300049668 Ga0501233_003226 Ga0501233_003226_316_1920 522
85 3300049675 Ga0501243_000550 Ga0501243_000550_3213_4817 522
86 3300049682 Ga0501252_000110 Ga0501252_000110_451_2055 522
87 3300049688 Ga0501259_000683 Ga0501259_000683_608_2212 522
88 3300049705 Ga0501225_0000741 Ga0501225_0000741_6103_7707 522
89 3300049708 Ga0501245_000551 Ga0501245_000551_45_1649 522
90 3300050507 nmdc:mga05p37_11711_c1 nmdc:mga05p37_11711_c1_8002_9609 522
91 3300050511 nmdc:mga08y16_117057_c1 nmdc:mga08y16_117057_c1_451_2019 522
92 3300003323 rootH1_10026142 rootH1_100261425 523
93 3300003323 rootH1_10180447 rootH1_101804472 523
94 3300005290 Ga0065712_10013288 Ga0065712_100132881 523
95 3300005328 Ga0070676_10019135 Ga0070676_100191352 523
96 3300005329 Ga0070683_100001238 Ga0070683_10000123817 523
97 3300005329 Ga0070683_100003526 Ga0070683_1000035267 523
98 3300005329 Ga0070683_100009324 Ga0070683_1000093242 523
99 3300005330 Ga0070690_100065512 Ga0070690_1000655121 523
100 3300005331 Ga0070670_100077244 Ga0070670_1000772441 523
101 3300005334 Ga0068869_100013137 Ga0068869_1000131372 523
102 3300005334 Ga0068869_100043205 Ga0068869_1000432054 523
103 3300005337 Ga0070682_100016553 Ga0070682_1000165532 523
104 3300005340 Ga0070689_100003681 Ga0070689_1000036817 523
105 3300005340 Ga0070689_100009655 Ga0070689_1000096556 523
106 3300005340 Ga0070689_100027293 Ga0070689_1000272932 523
107 3300005344 Ga0070661_100006927 Ga0070661_1000069275 523
108 3300005353 Ga0070669_100018709 Ga0070669_1000187091 523
109 3300005354 Ga0070675_100060709 Ga0070675_1000607092 523
110 3300005355 Ga0070671_100056647 Ga0070671_1000566471 523
111 3300005364 Ga0070673_100011331 Ga0070673_1000113313 523
112 3300005365 Ga0070688_100005751 Ga0070688_1000057512 523
113 3300005366 Ga0070659_100019566 Ga0070659_1000195665 523
114 3300005366 Ga0070659_100032831 Ga0070659_1000328312 523
115 3300005367 Ga0070667_100014740 Ga0070667_1000147401 523
116 3300005466 Ga0070685_10002606 Ga0070685_100026066 523
117 3300005466 Ga0070685_10009842 Ga0070685_100098423 523
118 3300005471 Ga0070698_100002200 Ga0070698_10000220013 523
119 3300005471 Ga0070698_100005961 Ga0070698_10000596112 523
120 3300005471 Ga0070698_100007970 Ga0070698_1000079705 523
121 3300005530 Ga0070679_100013827 Ga0070679_1000138274 523
122 3300005535 Ga0070684_100004827 Ga0070684_1000048275 523
123 3300005535 Ga0070684_100011027 Ga0070684_1000110276 523
124 3300005539 Ga0068853_100021570 Ga0068853_1000215705 523
125 3300005539 Ga0068853_100031535 Ga0068853_1000315354 523
126 3300005564 Ga0070664_100000624 Ga0070664_10000062418 523
127 3300005564 Ga0070664_100014873 Ga0070664_1000148733 523
128 3300005577 Ga0068857_100010207 Ga0068857_1000102075 523
129 3300005614 Ga0068856_100087759 Ga0068856_1000877592 523
130 3300005616 Ga0068852_100005358 Ga0068852_1000053586 523
131 3300005616 Ga0068852_100116209 Ga0068852_1001162092 523
132 3300005617 Ga0068859_100011345 Ga0068859_1000113455 523
133 3300005719 Ga0068861_100017838 Ga0068861_1000178384 523
134 3300005841 Ga0068863_100031194 Ga0068863_1000311942 523
135 3300005844 Ga0068862_100033366 Ga0068862_1000333664 523
136 3300006237 Ga0097621_100000018 Ga0097621_10000001825 523
137 3300006358 Ga0068871_100001846 Ga0068871_1000018464 523
138 3300006844 Ga0075428_100089568 Ga0075428_1000895682 523
139 3300006847 Ga0075431_100028149 Ga0075431_1000281496 523
140 3300006880 Ga0075429_100021757 Ga0075429_1000217574 523
141 3300006880 Ga0075429_100063566 Ga0075429_1000635662 523
142 3300006931 Ga0097620_100011345 Ga0097620_1000113455 523
143 3300009094 Ga0111539_10030193 Ga0111539_100301932 523
144 3300009174 Ga0105241_10021867 Ga0105241_100218674 523
145 3300009176 Ga0105242_10014439 Ga0105242_100144392 523
146 3300009177 Ga0105248_10284981 Ga0105248_102849811 523
147 3300009545 Ga0105237_10047240 Ga0105237_100472402 523
148 3300009553 Ga0105249_10003283 Ga0105249_1000328312 523
149 3300009553 Ga0105249_10033606 Ga0105249_100336061 523
150 3300009553 Ga0105249_10148895 Ga0105249_101488952 523
151 3300013100 Ga0157373_10002565 Ga0157373_1000256513 523
152 3300013296 Ga0157374_10012809 Ga0157374_100128093 523
153 3300013296 Ga0157374_10029817 Ga0157374_100298172 523
154 3300013306 Ga0163162_10018838 Ga0163162_100188384 523
155 3300013306 Ga0163162_10052603 Ga0163162_100526035 523
156 3300013306 Ga0163162_10063969 Ga0163162_100639693 523
157 3300013306 Ga0163162_10075780 Ga0163162_100757801 523
158 3300013306 Ga0163162_10136941 Ga0163162_101369411 523
159 3300013307 Ga0157372_10078663 Ga0157372_100786632 523
160 3300013307 Ga0157372_10240816 Ga0157372_102408162 523
161 3300013308 Ga0157375_10026629 Ga0157375_100266295 523
162 3300013308 Ga0157375_10027768 Ga0157375_100277685 523
163 3300013308 Ga0157375_10093991 Ga0157375_100939912 523
164 3300014325 Ga0163163_10001289 Ga0163163_1000128914 523
165 3300014325 Ga0163163_10113253 Ga0163163_101132532 523
166 3300014325 Ga0163163_10197864 Ga0163163_101978641 523
167 3300014326 Ga0157380_10047222 Ga0157380_100472222 523
168 3300014745 Ga0157377_10006525 Ga0157377_100065254 523
169 3300014969 Ga0157376_10071318 Ga0157376_100713183 523
170 3300017792 Ga0163161_10004795 Ga0163161_100047951 523
171 3300017792 Ga0163161_10060141 Ga0163161_100601412 523
172 3300025904 Ga0207647_10005311 Ga0207647_100053117 523
173 3300025904 Ga0207647_10042725 Ga0207647_100427252 523
174 3300025907 Ga0207645_10014677 Ga0207645_100146774 523
175 3300025907 Ga0207645_10038420 Ga0207645_100384202 523
176 3300025912 Ga0207707_10044007 Ga0207707_100440072 523
177 3300025913 Ga0207695_10012546 Ga0207695_100125468 523
178 3300025921 Ga0207652_10120892 Ga0207652_101208922 523
179 3300025925 Ga0207650_10018419 Ga0207650_100184193 523
180 3300025926 Ga0207659_10020929 Ga0207659_100209294 523
181 3300025931 Ga0207644_10025010 Ga0207644_100250104 523
182 3300025932 Ga0207690_10047013 Ga0207690_100470132 523
183 3300025932 Ga0207690_10142824 Ga0207690_101428241 523
184 3300025934 Ga0207686_10001610 Ga0207686_100016103 523
185 3300025936 Ga0207670_10003169 Ga0207670_100031695 523
186 3300025940 Ga0207691_10133159 Ga0207691_101331592 523
187 3300025941 Ga0207711_10072405 Ga0207711_100724053 523
188 3300025942 Ga0207689_10003111 Ga0207689_100031119 523
189 3300025942 Ga0207689_10042235 Ga0207689_100422353 523
190 3300025942 Ga0207689_10077213 Ga0207689_100772133 523
191 3300025942 Ga0207689_10131508 Ga0207689_101315081 523
192 3300025944 Ga0207661_10000620 Ga0207661_1000062020 523
193 3300025944 Ga0207661_10155422 Ga0207661_101554222 523
194 3300025945 Ga0207679_10000683 Ga0207679_1000068320 523
195 3300025960 Ga0207651_10040332 Ga0207651_100403322 523
196 3300026041 Ga0207639_10000970 Ga0207639_100009705 523
197 3300026088 Ga0207641_10080982 Ga0207641_100809821 523
198 3300026088 Ga0207641_10135697 Ga0207641_101356972 523
199 3300026095 Ga0207676_10012781 Ga0207676_100127815 523
200 3300026095 Ga0207676_10020227 Ga0207676_100202274 523
201 3300026116 Ga0207674_10006324 Ga0207674_1000632411 523
202 3300026116 Ga0207674_10010086 Ga0207674_100100865 523
203 3300026116 Ga0207674_10063977 Ga0207674_100639774 523
204 3300026118 Ga0207675_100004889 Ga0207675_1000048895 523
205 3300031456 Ga0307513_10026700 Ga0307513_100267004 523
206 3300031507 Ga0307509_10040128 Ga0307509_100401282 523
207 3300035172 Ga0373955_0004198 Ga0373955_0004198_2196_3827 523
208 3300037418 Ga0395900_0024855 Ga0395900_0024855_238_1944 523
209 3300037471 Ga0395905_0002008 Ga0395905_0002008_12579_14285 523
210 3300037471 Ga0395905_0011725 Ga0395905_0011725_5970_7577 523
211 3300041404 Ga0439436_0003142 Ga0439436_0003142_1665_3275 523
212 3300042001 Ga0439441_004317 Ga0439441_004317_323_1942 523
213 3300042002 Ga0439442_003273 Ga0439442_003273_965_2572 523
214 3300042007 Ga0439449_0002912 Ga0439449_0002912_3605_5212 523
215 3300042014 Ga0439457_000990 Ga0439457_000990_1484_3094 523
216 3300042015 Ga0439462_0005461 Ga0439462_0005461_58_1668 523
217 3300042128 Ga0450897_000886 Ga0450897_000886_197_1804 523
218 3300044656 Ga0466969_0000646 Ga0466969_0000646_170_1753 523
219 3300044658 Ga0466972_0026387 Ga0466972_0026387_379_1989 523
220 3300044712 Ga0453684_0025187 Ga0453684_0025187_858_2465 523
221 3300044735 Ga0466968_0018215 Ga0466968_0018215_1018_2628 523
222 3300044842 Ga0466957_0000587 Ga0466957_0000587_2618_4204 523
223 3300044842 Ga0466957_0000880 Ga0466957_0000880_2271_3881 523
224 3300046517 Ga0495630_0009859 Ga0495630_0009859_1629_3260 523
225 3300046616 Ga0495668_0000513 Ga0495668_0000513_5961_7649 523
226 3300046675 Ga0495657_0070031 Ga0495657_0070031_439_2070 523
227 3300046809 Ga0495600_0068762 Ga0495600_0068762_73_1692 523
228 3300047444 Ga0495675_0037795 Ga0495675_0037795_684_2315 523
229 3300049581 Ga0501047_0041442 Ga0501047_0041442_994_2583 523
230 3300049581 Ga0501047_0169879 Ga0501047_0169879_421_2031 523
231 3300049674 Ga0501242_000275 Ga0501242_000275_1040_2650 523
232 3300049823 Ga0501044_0063760 Ga0501044_0063760_1332_2921 523
233 3300050508 nmdc:mga09592_7455_c1 nmdc:mga09592_7455_c1_4273_5910 523
234 3300050509 nmdc:mga0qj67_80203_c1 nmdc:mga0qj67_80203_c1_393_2030 523
235 3300053147 Ga0500589_010452 Ga0500589_010452_2152_3762 523
236 3300053151 Ga0500604_0000736 Ga0500604_0000736_1016_2614 523
237 3300005288 Ga0065714_10066997 Ga0065714_100669972 524
238 3300005841 Ga0068863_100012778 Ga0068863_1000127782 524
239 3300006195 Ga0075366_10040488 Ga0075366_100404881 524
240 3300006195 Ga0075366_10048734 Ga0075366_100487341 524
241 3300006871 Ga0075434_100052847 Ga0075434_1000528472 524
242 3300013297 Ga0157378_10009005 Ga0157378_100090058 524
243 3300025940 Ga0207691_10099893 Ga0207691_100998932 524
244 3300028794 Ga0307515_10001274 Ga0307515_1000127439 524
245 3300047472 Ga0495686_0072075 Ga0495686_0072075_291_1973 524
246 3300050493 nmdc:mga0k408_46242_c1 nmdc:mga0k408_46242_c1_797_2455 524
247 3300053727 Ga0500611_000059 Ga0500611_000059_40864_42474 524
248 3300033179 Ga0307507_10154288 Ga0307507_101542881 525
249 3300010375 Ga0105239_10002120 Ga0105239_1000212017 526
250 3300025949 Ga0207667_10032657 Ga0207667_100326575 526
251 3300026116 Ga0207674_10062724 Ga0207674_100627241 526
252 3300003322 rootL2_10202167 rootL2_102021672 527

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00691

OmpA

OmpA family

489

584

0.96

PF07676

PD40

WD40-like Beta Propeller Repeat

106

133

0.93

PF07676

PD40

WD40-like Beta Propeller Repeat

280

319

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5wtl-assembly4.cif.gz_D crystal structure of the periplasmic portion of outer membrane protein a (ompa) from capnocytophaga gingivalis 0.8241 422 526
5wtp-assembly2.cif.gz_B crystal structure of the c-terminal domain of outer membrane protein a (ompa) from capnocytophaga gingivalis 0.8119 420 524
3mn8-assembly4.cif.gz_D structure of drosophila melanogaster carboxypeptidase d isoform 1b short 0.8066 323 412
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.7931 323 411
2n48-assembly1.cif.gz_A ec-nmr structure of escherichia coli yiad determined by combining evolutionary couplings (ec) and sparse nmr data. northeast structural genomics consortium target er553 0.789 416 526
ID Description Score Start End Superfamily
af_I1NH52_350_429_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.896 323 411 2.60.40.1120
af_Q9LQ92_2_147_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8859 467 498 3.40.50.620
af_Q9M9H7_342_443_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8829 323 412 2.60.40.1120
af_Q9JHW1_795_903_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8688 323 412 2.60.40.1120
af_I1NH52_350_429_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8646 323 411 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A7H0GYU6-F1-model_v4 OmpA family protein 0.9313 83 527 GO:0009279
AF-A0A1G9H6X3-F1-model_v4 Outer membrane protein OmpA 0.9312 35 526 GO:0009279
AF-A0A7H0GYU6-F1-model_v4 OmpA family protein 0.9252 83 527 GO:0009279
AF-A0A348TMU2-F1-model_v4 Flagellar motor protein MotB 0.9243 124 527 GO:0009279
AF-A0A348TMU2-F1-model_v4 Flagellar motor protein MotB 0.9199 124 527 GO:0009279

Feature Viewer

pLDDT pTM Quality
84.85 0.81 High
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Predicted Structure (AlphaFold2)

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