F363105

General Info

Members Datasets Scaffolds Average Seq Length
252 166 504 230

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100256953|Ga0068856_1002569532
Length 279
Sequence MVKVLIADDQVLIRAGIAAILRAAPGYQVVGEARDGEEAVTMAELTEPDVVLMDIRMPEMDGIAATRRILNPDKEKAGSGRENPPHILILTTFDLDEYVYKALRAGASGFVLKDTPPERLLAALKAVADGDTLFSPTVTRRLIQAYCATEGGQLGAGQLTDRGAESGAAPRWSPIAVRPRASTEGRQGTDRAALAALTARETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRSMSKLNLSSRAQVVVLAYESGLVVPGQPPSSSGPARVTVGTARDA

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
84 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
85 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
147 3300053113 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 endosphere Metagenome Endosphere
148 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
152 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
153 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
154 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
155 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
156 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
157 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
158 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
159 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
160 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
161 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
162 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
163 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
164 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
165 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
166 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.44
Metatranscriptomes 0
Isolates 5.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.17
Nodule 0
Rhizoplane 1.19
Rhizosphere 88.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100256953 3300005614 Bacteria 1762
2 JGI25407J50210_10010264 3300003373 Bacteria 2381
3 Ga0070658_10157053 3300005327 Bacteria 1907
4 Ga0070676_10219978 3300005328 Bacteria 1254
5 Ga0070683_100040228 3300005329 Bacteria 4297
6 Ga0070682_100288284 3300005337 Bacteria 1199
7 Ga0068868_100970217 3300005338 Bacteria 776
8 Ga0070675_100390151 3300005354 Bacteria 1240
9 Ga0070714_100035807 3300005435 Bacteria 4160
10 Ga0070714_100052556 3300005435 Bacteria 3475
11 Ga0070711_100029086 3300005439 Bacteria 3643
12 Ga0070700_100460180 3300005441 Bacteria 970
13 Ga0070663_100014142 3300005455 Bacteria 5115
14 Ga0070685_10015474 3300005466 Bacteria 4053
15 Ga0068853_100121992 3300005539 Bacteria 2326
16 Ga0070665_100010143 3300005548 Bacteria 9526
17 Ga0070665_100161417 3300005548 Bacteria 2243
18 Ga0070665_101168242 3300005548 Bacteria 781
19 Ga0068855_100008170 3300005563 Bacteria 12652
20 Ga0068855_100012379 3300005563 Bacteria 10304
21 Ga0068854_100002234 3300005578 Bacteria 11917
22 Ga0068854_100009009 3300005578 Bacteria 6430
23 Ga0068856_100028907 3300005614 Bacteria 5417
24 Ga0068856_100058834 3300005614 Bacteria 3796
25 Ga0068856_100245685 3300005614 Bacteria 1805
26 Ga0068852_100010773 3300005616 Bacteria 6848
27 Ga0068852_100049339 3300005616 Bacteria 3601
28 Ga0068852_100161892 3300005616 Bacteria 2090
29 Ga0068864_100180390 3300005618 Bacteria 1930
30 Ga0068861_100359659 3300005719 Bacteria 1280
31 Ga0068858_100566545 3300005842 Bacteria 1100
32 Ga0081455_10002321 3300005937 Bacteria 22689
33 Ga0081455_10009501 3300005937 Bacteria 9994
34 Ga0081455_10097917 3300005937 Bacteria 2362
35 Ga0081455_10242756 3300005937 Bacteria 1322
36 Ga0081538_10000118 3300005981 Bacteria 79260
37 Ga0081538_10000565 3300005981 Bacteria 40995
38 Ga0081540_1001356 3300005983 Bacteria 21284
39 Ga0081539_10006156 3300005985 Bacteria 11673
40 Ga0081539_10032979 3300005985 Bacteria 3161
41 Ga0075365_10197903 3300006038 Bacteria 1407
42 Ga0075368_10143370 3300006042 Bacteria 996
43 Ga0075367_10062941 3300006178 Bacteria 2217
44 Ga0075428_100447971 3300006844 Bacteria 1383
45 Ga0075428_101258449 3300006844 Bacteria 779
46 Ga0075430_100094739 3300006846 Bacteria 2496
47 Ga0075431_100037771 3300006847 Bacteria 4973
48 Ga0075434_100510154 3300006871 Bacteria 1223
49 Ga0105240_10094497 3300009093 Bacteria 3646
50 Ga0111539_10083611 3300009094 Bacteria 3753
51 Ga0111539_10162356 3300009094 Bacteria 2613
52 Ga0111539_10260290 3300009094 Bacteria 2020
53 Ga0105245_10115429 3300009098 Bacteria 2502
54 Ga0114129_10046604 3300009147 Bacteria 6091
55 Ga0114129_10143055 3300009147 Bacteria 3277
56 Ga0105241_10000971 3300009174 Bacteria 21715
57 Ga0105237_10130488 3300009545 Bacteria 2508
58 Ga0105237_10361761 3300009545 Bacteria 1455
59 Ga0105238_10002942 3300009551 Bacteria 16998
60 Ga0105238_10010344 3300009551 Bacteria 9361
61 Ga0105239_10014532 3300010375 Bacteria 8734
62 Ga0105239_10166963 3300010375 Bacteria 2461
63 Ga0105239_10437095 3300010375 Bacteria 1483
64 Ga0157369_10153713 3300013105 Bacteria 2431
65 Ga0157374_10045885 3300013296 Bacteria 4045
66 Ga0163162_10464358 3300013306 Bacteria 1397
67 Ga0157372_10314019 3300013307 Bacteria 1824
68 Ga0157375_10751232 3300013308 Bacteria 1127
69 Ga0157377_10325336 3300014745 Bacteria 1023
70 Ga0163161_10245667 3300017792 Bacteria 1393
71 Ga0207688_10047464 3300025901 Bacteria 2398
72 Ga0207688_10337965 3300025901 Bacteria 926
73 Ga0207647_10012298 3300025904 Bacteria 5962
74 Ga0207647_10014820 3300025904 Bacteria 5362
75 Ga0207643_10018439 3300025908 Bacteria 3822
76 Ga0207654_10037756 3300025911 Bacteria 2706
77 Ga0207695_10002170 3300025913 Bacteria 29663
78 Ga0207695_10005774 3300025913 Bacteria 16294
79 Ga0207671_10000306 3300025914 Bacteria 72328
80 Ga0207671_10001257 3300025914 Bacteria 29874
81 Ga0207663_10152791 3300025916 Bacteria 1621
82 Ga0207694_10000912 3300025924 Bacteria 26160
83 Ga0207694_10001047 3300025924 Bacteria 24075
84 Ga0207650_10095160 3300025925 Bacteria 2283
85 Ga0207700_10207237 3300025928 Bacteria 1655
86 Ga0207664_10021986 3300025929 Bacteria 4754
87 Ga0207664_10173778 3300025929 Bacteria 1845
88 Ga0207667_10014758 3300025949 Bacteria 8891
89 Ga0207667_10029719 3300025949 Bacteria 5921
90 Ga0207640_10007001 3300025981 Bacteria 6206
91 Ga0207640_10046919 3300025981 Bacteria 2783
92 Ga0207677_10671672 3300026023 Bacteria 916
93 Ga0207639_10607481 3300026041 Bacteria 1009
94 Ga0207678_10014208 3300026067 Bacteria 7000
95 Ga0207702_10041812 3300026078 Bacteria 3843
96 Ga0207702_10199035 3300026078 Bacteria 1856
97 Ga0207702_10460203 3300026078 Bacteria 1235
98 Ga0207676_10041468 3300026095 Bacteria 3534
99 Ga0207674_10058146 3300026116 Bacteria 3919
100 Ga0207675_100432706 3300026118 Bacteria 1301
101 Ga0207698_10085411 3300026142 Bacteria 2563
102 Ga0207698_10240265 3300026142 Bacteria 1650
103 Ga0209813_10073540 3300027866 Bacteria 1116
104 Ga0268266_10088352 3300028379 Bacteria 2712
105 Ga0268266_10384381 3300028379 Bacteria 1324
106 Ga0307517_10195316 3300028786 Bacteria 1276
107 Ga0307512_10022141 3300030522 Bacteria 5718
108 Ga0307513_10126829 3300031456 Bacteria 2506
109 Ga0307509_10117313 3300031507 Bacteria 2649
110 Ga0307408_100708199 3300031548 Bacteria 906
111 Ga0307408_100851471 3300031548 Bacteria 831
112 Ga0307514_10335600 3300031649 Bacteria 818
113 Ga0307413_10220604 3300031824 Bacteria 1385
114 Ga0307518_10093141 3300031838 Bacteria 2165
115 Ga0307409_100616766 3300031995 Bacteria 1074
116 Ga0307409_100666198 3300031995 Bacteria 1036
117 Ga0307416_100353011 3300032002 Bacteria 1489
118 Ga0307416_100861536 3300032002 Bacteria 1004
119 Ga0395898_0011425 3300037466 Bacteria 9222
120 Ga0395901_0025828 3300038443 Bacteria 6031
121 Ga0439439_0029221 3300041406 Bacteria 1398
122 Ga0451853_0346083 3300041512 Bacteria 3059
123 Ga0451853_0877467 3300041512 Bacteria 1169
124 Ga0439464_0089621 3300042439 Bacteria 926
125 Ga0466969_0000208 3300044656 Bacteria 32016
126 Ga0466969_0009923 3300044656 Bacteria 5048
127 Ga0466969_0014988 3300044656 Bacteria 4066
128 Ga0466969_0055509 3300044656 Bacteria 1937
129 Ga0466966_0033955 3300044684 Bacteria 3301
130 Ga0466966_0142677 3300044684 Bacteria 1463
131 Ga0466961_0002886 3300044693 Bacteria 10661
132 Ga0466961_0003946 3300044693 Bacteria 9277
133 Ga0466961_0057684 3300044693 Bacteria 2471
134 Ga0466961_0059334 3300044693 Bacteria 2433
135 Ga0466963_0015357 3300044694 Bacteria 4740
136 Ga0466971_0001172 3300044719 Bacteria 10894
137 Ga0466971_0001298 3300044719 Bacteria 10443
138 Ga0466971_0111381 3300044719 Bacteria 1263
139 Ga0466970_0023448 3300044765 Bacteria 3223
140 Ga0466970_0040167 3300044765 Bacteria 2484
141 Ga0466970_0066057 3300044765 Bacteria 1941
142 Ga0466957_0099488 3300044842 Bacteria 1831
143 Ga0466960_0009924 3300044901 Bacteria 3940
144 Ga0466960_0136523 3300044901 Bacteria 1299
145 Ga0466960_0325969 3300044901 Bacteria 871
146 Ga0466959_0000852 3300045049 Bacteria 18026
147 Ga0466959_0017429 3300045049 Bacteria 5264
148 Ga0466959_0227092 3300045049 Bacteria 1293
149 Ga0466958_0041435 3300045836 Bacteria 2769
150 Ga0466958_0117896 3300045836 Bacteria 1660
151 Ga0466958_0175087 3300045836 Bacteria 1360
152 Ga0466967_0151144 3300045976 Bacteria 2170
153 Ga0495651_0000158 3300046462 Bacteria 49868
154 Ga0495651_0050744 3300046462 Bacteria 3200
155 Ga0495582_0121527 3300046473 Bacteria 1472
156 Ga0495628_0007735 3300046516 Bacteria 9271
157 Ga0495652_0000161 3300046529 Bacteria 76355
158 Ga0495652_0015990 3300046529 Bacteria 6713
159 Ga0495645_0044368 3300046543 Bacteria 3243
160 Ga0495623_0033352 3300046679 Bacteria 3304
161 Ga0495646_0003250 3300046680 Bacteria 10104
162 Ga0495658_0107302 3300046683 Bacteria 1675
163 Ga0495613_0232462 3300046689 Bacteria 1291
164 Ga0495604_0014187 3300047317 Bacteria 6352
165 Ga0495687_106492 3300047443 Bacteria 1040
166 Ga0495602_0179804 3300048088 Bacteria 1633
167 Ga0496108_0013254 3300048911 Bacteria 6718
168 Ga0496108_0091185 3300048911 Bacteria 2591
169 Ga0496110_0116058 3300048913 Bacteria 2410
170 Ga0496126_0491408 3300048929 Bacteria 982
171 Ga0501031_0016080 3300049568 Bacteria 4859
172 Ga0501033_0000908 3300049570 Bacteria 27052
173 Ga0501034_0002448 3300049571 Bacteria 22388
174 Ga0501034_0070416 3300049571 Bacteria 3509
175 Ga0501036_0000692 3300049572 Bacteria 24878
176 Ga0501036_0004031 3300049572 Bacteria 11811
177 Ga0501036_0322142 3300049572 Bacteria 1291
178 Ga0501037_0023828 3300049573 Bacteria 4526
179 Ga0501037_0078774 3300049573 Bacteria 2391
180 Ga0501038_0064867 3300049574 Bacteria 3113
181 Ga0501039_0004631 3300049575 Bacteria 10398
182 Ga0501039_0178448 3300049575 Bacteria 1670
183 Ga0501040_0108718 3300049576 Bacteria 1938
184 Ga0501040_0184612 3300049576 Bacteria 1479
185 Ga0501041_0054731 3300049577 Bacteria 2434
186 Ga0501043_0001081 3300049579 Bacteria 23969
187 Ga0501043_0025760 3300049579 Bacteria 4613
188 Ga0501043_0414088 3300049579 Bacteria 1017
189 Ga0501046_0051164 3300049580 Bacteria 3261
190 Ga0501047_0076913 3300049581 Bacteria 3211
191 Ga0501048_0007181 3300049582 Bacteria 8458
192 Ga0501048_0208585 3300049582 Bacteria 1386
193 Ga0501048_0259767 3300049582 Bacteria 1234
194 Ga0501070_0023639 3300049586 Bacteria 5148
195 Ga0501070_0091464 3300049586 Bacteria 2518
196 Ga0501071_0021590 3300049587 Bacteria 4485
197 Ga0501071_0333421 3300049587 Bacteria 1153
198 Ga0501071_0605423 3300049587 Bacteria 842
199 Ga0501072_0334697 3300049588 Bacteria 1202
200 Ga0501073_0037001 3300049589 Bacteria 3467
201 Ga0501074_0009824 3300049590 Bacteria 6950
202 Ga0501074_0035415 3300049590 Bacteria 3617
203 Ga0501074_0070209 3300049590 Bacteria 2518
204 Ga0501075_0384373 3300049591 Bacteria 1070
205 Ga0501076_0030866 3300049592 Bacteria 4175
206 Ga0501076_0085467 3300049592 Bacteria 2535
207 Ga0501077_0184827 3300049593 Bacteria 1324
208 Ga0501077_0364736 3300049593 Bacteria 922
209 Ga0501079_0204943 3300049741 Bacteria 1540
210 Ga0501079_0381915 3300049741 Bacteria 1104
211 Ga0501080_0300387 3300049742 Bacteria 1456
212 Ga0501081_0071751 3300049743 Bacteria 2414
213 Ga0501035_0000307 3300049822 Bacteria 57471
214 Ga0501035_0443120 3300049822 Bacteria 1075
215 Ga0501044_0046757 3300049823 Bacteria 4479
216 Ga0501044_0419332 3300049823 Bacteria 1249
217 Ga0501045_0611249 3300049824 Bacteria 807
218 nmdc:mga04h51_18893_c1 3300050495 Bacteria 2036
219 nmdc:mga09592_132002_c1 3300050508 Bacteria 1803
220 nmdc:mga09592_132832_c1 3300050508 Bacteria 2143
221 nmdc:mga09592_40_c2 3300050508 Bacteria 19924
222 nmdc:mga0qj67_539143_c1 3300050509 Bacteria 936
223 nmdc:mga06r32_31587_c1 3300050510 Bacteria 4975
224 Ga0495601_0045119 3300053077 Bacteria 2770
225 Ga0495612_0056919 3300053078 Bacteria 1614
226 Ga0495619_0085986 3300053085 Bacteria 2125
227 Ga0500560_111623 3300053107 Bacteria 917
228 Ga0500580_112294 3300053113 Bacteria 1052
229 Ga0500614_006122 3300053123 Bacteria 2529
230 Ga0501084_0112355 3300054114 Bacteria 2289
231 Ga0501084_0386673 3300054114 Bacteria 1182
232 Ga0501082_0058361 3300060353 Bacteria 3325
233 Ga0501082_0075859 3300060353 Bacteria 2897
234 Ga0466962_0000822 3300061719 Bacteria 13959
235 Ga0466962_0003088 3300061719 Bacteria 7920
236 Ga0466962_0057279 3300061719 Bacteria 1860
237 Ga0466962_0162124 3300061719 Bacteria 1087
238 Ga0530510_0406330 3300061734 Bacteria 1027
239 2547406342 2547132111 Bacteria 8013147
240 2558907412 2558860112 Bacteria 9931328
241 2785365585 2784746768 Bacteria 10036182
242 2811842888 2808606982 Bacteria 7791042
243 2852678252 2852677369 Bacteria 3768884
244 2862286483 2862281513 Bacteria 9621493
245 2862708928 2862705112 Bacteria 6563286
246 2873316411 2873314349 Bacteria 8512634
247 2895433410 2895427314 Bacteria 13147766
248 2897563987 2897561785 Bacteria 3256946
249 3003007723 3002998708 Bacteria 11715108
250 8008489056 8008485437 Bacteria 7198341
251 8025528539 8025524527 Bacteria 7197316
252 8053948991 8053945823 Bacteria 8962862
253 Ga0068856_100256953
254 JGI25407J50210_10010264
255 Ga0070658_10157053
256 Ga0070676_10219978
257 Ga0070683_100040228
258 Ga0070682_100288284
259 Ga0068868_100970217
260 Ga0070675_100390151
261 Ga0070714_100035807
262 Ga0070714_100052556
263 Ga0070711_100029086
264 Ga0070700_100460180
265 Ga0070663_100014142
266 Ga0070685_10015474
267 Ga0068853_100121992
268 Ga0070665_100010143
269 Ga0070665_100161417
270 Ga0070665_101168242
271 Ga0068855_100008170
272 Ga0068855_100012379
273 Ga0068854_100002234
274 Ga0068854_100009009
275 Ga0068856_100028907
276 Ga0068856_100058834
277 Ga0068856_100245685
278 Ga0068852_100010773
279 Ga0068852_100049339
280 Ga0068852_100161892
281 Ga0068864_100180390
282 Ga0068861_100359659
283 Ga0068858_100566545
284 Ga0081455_10002321
285 Ga0081455_10009501
286 Ga0081455_10097917
287 Ga0081455_10242756
288 Ga0081538_10000118
289 Ga0081538_10000565
290 Ga0081540_1001356
291 Ga0081539_10006156
292 Ga0081539_10032979
293 Ga0075365_10197903
294 Ga0075368_10143370
295 Ga0075367_10062941
296 Ga0075428_100447971
297 Ga0075428_101258449
298 Ga0075430_100094739
299 Ga0075431_100037771
300 Ga0075434_100510154
301 Ga0105240_10094497
302 Ga0111539_10083611
303 Ga0111539_10162356
304 Ga0111539_10260290
305 Ga0105245_10115429
306 Ga0114129_10046604
307 Ga0114129_10143055
308 Ga0105241_10000971
309 Ga0105237_10130488
310 Ga0105237_10361761
311 Ga0105238_10002942
312 Ga0105238_10010344
313 Ga0105239_10014532
314 Ga0105239_10166963
315 Ga0105239_10437095
316 Ga0157369_10153713
317 Ga0157374_10045885
318 Ga0163162_10464358
319 Ga0157372_10314019
320 Ga0157375_10751232
321 Ga0157377_10325336
322 Ga0163161_10245667
323 Ga0207688_10047464
324 Ga0207688_10337965
325 Ga0207647_10012298
326 Ga0207647_10014820
327 Ga0207643_10018439
328 Ga0207654_10037756
329 Ga0207695_10002170
330 Ga0207695_10005774
331 Ga0207671_10000306
332 Ga0207671_10001257
333 Ga0207663_10152791
334 Ga0207694_10000912
335 Ga0207694_10001047
336 Ga0207650_10095160
337 Ga0207700_10207237
338 Ga0207664_10021986
339 Ga0207664_10173778
340 Ga0207667_10014758
341 Ga0207667_10029719
342 Ga0207640_10007001
343 Ga0207640_10046919
344 Ga0207677_10671672
345 Ga0207639_10607481
346 Ga0207678_10014208
347 Ga0207702_10041812
348 Ga0207702_10199035
349 Ga0207702_10460203
350 Ga0207676_10041468
351 Ga0207674_10058146
352 Ga0207675_100432706
353 Ga0207698_10085411
354 Ga0207698_10240265
355 Ga0209813_10073540
356 Ga0268266_10088352
357 Ga0268266_10384381
358 Ga0307517_10195316
359 Ga0307512_10022141
360 Ga0307513_10126829
361 Ga0307509_10117313
362 Ga0307408_100708199
363 Ga0307408_100851471
364 Ga0307514_10335600
365 Ga0307413_10220604
366 Ga0307518_10093141
367 Ga0307409_100616766
368 Ga0307409_100666198
369 Ga0307416_100353011
370 Ga0307416_100861536
371 Ga0395898_0011425
372 Ga0395901_0025828
373 Ga0439439_0029221
374 Ga0451853_0346083
375 Ga0451853_0877467
376 Ga0439464_0089621
377 Ga0466969_0000208
378 Ga0466969_0009923
379 Ga0466969_0014988
380 Ga0466969_0055509
381 Ga0466966_0033955
382 Ga0466966_0142677
383 Ga0466961_0002886
384 Ga0466961_0003946
385 Ga0466961_0057684
386 Ga0466961_0059334
387 Ga0466963_0015357
388 Ga0466971_0001172
389 Ga0466971_0001298
390 Ga0466971_0111381
391 Ga0466970_0023448
392 Ga0466970_0040167
393 Ga0466970_0066057
394 Ga0466957_0099488
395 Ga0466960_0009924
396 Ga0466960_0136523
397 Ga0466960_0325969
398 Ga0466959_0000852
399 Ga0466959_0017429
400 Ga0466959_0227092
401 Ga0466958_0041435
402 Ga0466958_0117896
403 Ga0466958_0175087
404 Ga0466967_0151144
405 Ga0495651_0000158
406 Ga0495651_0050744
407 Ga0495582_0121527
408 Ga0495628_0007735
409 Ga0495652_0000161
410 Ga0495652_0015990
411 Ga0495645_0044368
412 Ga0495623_0033352
413 Ga0495646_0003250
414 Ga0495658_0107302
415 Ga0495613_0232462
416 Ga0495604_0014187
417 Ga0495687_106492
418 Ga0495602_0179804
419 Ga0496108_0013254
420 Ga0496108_0091185
421 Ga0496110_0116058
422 Ga0496126_0491408
423 Ga0501031_0016080
424 Ga0501033_0000908
425 Ga0501034_0002448
426 Ga0501034_0070416
427 Ga0501036_0000692
428 Ga0501036_0004031
429 Ga0501036_0322142
430 Ga0501037_0023828
431 Ga0501037_0078774
432 Ga0501038_0064867
433 Ga0501039_0004631
434 Ga0501039_0178448
435 Ga0501040_0108718
436 Ga0501040_0184612
437 Ga0501041_0054731
438 Ga0501043_0001081
439 Ga0501043_0025760
440 Ga0501043_0414088
441 Ga0501046_0051164
442 Ga0501047_0076913
443 Ga0501048_0007181
444 Ga0501048_0208585
445 Ga0501048_0259767
446 Ga0501070_0023639
447 Ga0501070_0091464
448 Ga0501071_0021590
449 Ga0501071_0333421
450 Ga0501071_0605423
451 Ga0501072_0334697
452 Ga0501073_0037001
453 Ga0501074_0009824
454 Ga0501074_0035415
455 Ga0501074_0070209
456 Ga0501075_0384373
457 Ga0501076_0030866
458 Ga0501076_0085467
459 Ga0501077_0184827
460 Ga0501077_0364736
461 Ga0501079_0204943
462 Ga0501079_0381915
463 Ga0501080_0300387
464 Ga0501081_0071751
465 Ga0501035_0000307
466 Ga0501035_0443120
467 Ga0501044_0046757
468 Ga0501044_0419332
469 Ga0501045_0611249
470 nmdc:mga04h51_18893_c1
471 nmdc:mga09592_132002_c1
472 nmdc:mga09592_132832_c1
473 nmdc:mga09592_40_c2
474 nmdc:mga0qj67_539143_c1
475 nmdc:mga06r32_31587_c1
476 Ga0495601_0045119
477 Ga0495612_0056919
478 Ga0495619_0085986
479 Ga0500560_111623
480 Ga0500580_112294
481 Ga0500614_006122
482 Ga0501084_0112355
483 Ga0501084_0386673
484 Ga0501082_0058361
485 Ga0501082_0075859
486 Ga0466962_0000822
487 Ga0466962_0003088
488 Ga0466962_0057279
489 Ga0466962_0162124
490 Ga0530510_0406330
491 2547406342
492 2558907412
493 2785365585
494 2811842888
495 2852678252
496 2862286483
497 2862708928
498 2873316411
499 2895433410
500 2897563987
501 3003007723
502 8008489056
503 8025528539
504 8053948991

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

195

251

0.97

PF04545

Sigma70_r4

Sigma-70, region 4

193

240

0.96

PF08281

Sigma70_r4_2

Sigma-70, region 4

191

239

0.96

PF00072

Response_reg

Response regulator receiver domain

4

125

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9917 153 215
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9904 151 215
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9897 151 215
4wu4-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 22bp dna 0.9836 151 214
4wul-assembly1.cif.gz_B crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9796 153 215
ID Description Score Start End Superfamily
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9917 155 209 1.10.10.10
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.988 155 209 1.10.10.10
4if4C02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9746 151 215 1.10.10.10
4if4D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9735 151 215 1.10.10.10
4if4B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9714 151 214 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1V0ULF6-F1-model_v4 DNA-binding response regulator 0.9724 1 221 GO:0000160
GO:0003677
GO:0006355
AF-A0A7W8ZB49-F1-model_v4 DNA-binding NarL/FixJ family response regulator 0.9721 2 219 GO:0000160
GO:0003677
GO:0006355
AF-A0A1V0ULF6-F1-model_v4 DNA-binding response regulator 0.9681 1 221 GO:0000160
GO:0003677
GO:0006355
AF-A0A4Y4DPG2-F1-model_v4 DNA-binding response regulator 0.9674 2 218 GO:0000160
GO:0003677
GO:0006355
AF-A0A2X0JW75-F1-model_v4 DNA-binding response regulator 0.9655 2 215 GO:0000160
GO:0003677
GO:0006355

Map