F362846

General Info

Members Datasets Scaffolds Average Seq Length
251 226 119 240

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2897803580|2897804483
Length 272
Sequence DPSQDTPSPSTGRFLKAIYVYEVPVRLWHWVNALAITVLAVTGYLIGSPLPSTPGEASANFLMGYIRFAHFAAGYVFAIGFLGRLYWAFAGNHHAKQLFRFPFWDGHWWAELFVEARWYLFLEREPKLYVGHNPLAQFAMFWVIGIGSVFMIVTGFALYGEGAGVDSWQDRVFGWVIPLFGQSQDVHTWHHLGMWAILLFVMVHIYAAVREDIMSRQSIVSTMVSGVRTFKDAGQPADEDAPAEPAHSRRFHAGRKGGAAKTATPHAPEPVD

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
3 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
4 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
5 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
6 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
7 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
8 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
9 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
10 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
11 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
12 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
13 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
14 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
15 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
16 2643221660 Methylibium sp. Root1272 Isolate Unclassified
17 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
18 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
19 2738541277 Variovorax sp. GV051 Isolate Unclassified
20 2738543019 Variovorax sp. GV040 Isolate Unclassified
21 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
22 2791355199
23 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
24 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
25 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
26 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
27 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
28 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
29 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
30 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
31 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
32 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
33 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
34 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
35 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
36 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
37 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
38 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
39 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
40 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
41 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
42 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
43 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
44 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
45 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
46 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
47 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
48 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
49 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
50 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
51 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
52 2885326080 Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 Isolate Nodule
53 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
54 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
55 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
56 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
57 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
58 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
59 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
60 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
61 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
62 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
63 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
64 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
65 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
66 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
67 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
68 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
69 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
70 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
71 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
72 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
73 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
74 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
75 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
76 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
77 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
78 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
79 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
80 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
81 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
82 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
83 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
84 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
85 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
86 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
87 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
88 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
89 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
90 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
91 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
92 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
93 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
94 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
95 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
96 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
97 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
98 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
99 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
100 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
101 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
102 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
103 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
104 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
105 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
106 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
107 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
108 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
109 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
110 3004167301 Mesorhizobium loti 582 Isolate Unclassified
111 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
112 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
113 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
114 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
115 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
116 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
117 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
118 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
119 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
120 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
121 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
122 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
123 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
124 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
125 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
126 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
127 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
128 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
129 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
130 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
131 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
132 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
133 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
134 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
135 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
136 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
137 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
138 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
139 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
140 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
141 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
142 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
143 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
144 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
145 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
146 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
147 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
148 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
149 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
150 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
151 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
152 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
165 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
166 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
167 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
168 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
169 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
170 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
171 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
172 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
173 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
174 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
175 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
176 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
177 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
178 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
179 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
180 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
181 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
182 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
183 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
184 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
185 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
186 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
187 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
188 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
189 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
190 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
191 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
192 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
193 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
194 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
195 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
196 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
197 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
198 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
199 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
200 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
201 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
202 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
203 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
204 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
205 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
206 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
207 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
208 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
209 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
210 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
211 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
212 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
213 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
214 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
215 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
216 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
217 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
218 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
219 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
220 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
221 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
222 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule
223 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
224 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule
225 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
226 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 47.6
Metatranscriptomes 0
Isolates 52.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.17
Nodule 41.04
Rhizoplane 1.59
Rhizosphere 33.47
Stem 0
Stem Tuber 0
Unclassified 16.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055534_1000014 3300003784 Bacteria 150629
2 Ga0055540_1012494 3300003792 Bacteria 2661
3 Ga0070676_10007312 3300005328 Bacteria 5923
4 Ga0070670_100089595 3300005331 Bacteria 2644
5 Ga0068869_100027586 3300005334 Bacteria 3960
6 Ga0070675_100018627 3300005354 Bacteria 5527
7 Ga0070667_100091276 3300005367 Bacteria 2619
8 Ga0070678_100090923 3300005456 Bacteria 2341
9 Ga0070662_100484707 3300005457 Bacteria 1030
10 Ga0070672_100044352 3300005543 Bacteria 3434
11 Ga0070664_100144247 3300005564 Bacteria 2099
12 Ga0068857_100017286 3300005577 Bacteria 6320
13 Ga0068861_100498854 3300005719 Bacteria 1100
14 Ga0068870_10017129 3300005840 Bacteria 3477
15 Ga0075363_100213884 3300006048 Bacteria 1103
16 Ga0075432_10032380 3300006058 Bacteria 1811
17 Ga0075370_10066062 3300006353 Bacteria 2063
18 Ga0075370_10129278 3300006353 Bacteria 1473
19 Ga0075370_10133717 3300006353 Bacteria 1448
20 Ga0079104_1052833 3300006946 Bacteria 899
21 Ga0099826_10000072 3300006948 Bacteria 53143
22 Ga0105245_10123412 3300009098 Bacteria 2422
23 Ga0105243_10105599 3300009148 Bacteria 2346
24 Ga0105237_10002315 3300009545 Bacteria 23664
25 Ga0105237_11060650 3300009545 Bacteria 817
26 Ga0105239_10870694 3300010375 Bacteria 1033
27 Ga0105246_10131810 3300011119 Bacteria 1868
28 Ga0157373_10009228 3300013100 Bacteria 7293
29 Ga0157375_10029276 3300013308 Bacteria 5177
30 Ga0182008_10057274 3300014497 Bacteria 1924
31 Ga0182006_1030961 3300015261 Bacteria 2159
32 Ga0182007_10073094 3300015262 Bacteria 1123
33 Ga0213872_10001299 3300021361 Bacteria 16642
34 Ga0213872_10037184 3300021361 Bacteria 2222
35 Ga0209565_1000047 3300025263 Bacteria 225745
36 Ga0209673_1000079 3300025273 Bacteria 225746
37 Ga0209675_1000046 3300025291 Bacteria 225746
38 Ga0209676_1022587 3300025292 Bacteria 2080
39 Ga0209758_1000068 3300025297 Bacteria 286488
40 Ga0209256_1041594 3300025299 Bacteria 1167
41 Ga0209051_1000049 3300025303 Bacteria 287483
42 Ga0209051_1006343 3300025303 Bacteria 6691
43 Ga0209051_1030835 3300025303 Bacteria 2074
44 Ga0207645_10001993 3300025907 Bacteria 16424
45 Ga0207671_10003143 3300025914 Bacteria 16762
46 Ga0207650_10068730 3300025925 Bacteria 2661
47 Ga0207659_10009144 3300025926 Bacteria 6186
48 Ga0207644_10022422 3300025931 Bacteria 4315
49 Ga0207706_10251613 3300025933 Bacteria 1543
50 Ga0207709_10346558 3300025935 Bacteria 1120
51 Ga0207691_10056739 3300025940 Bacteria 3567
52 Ga0207689_10014999 3300025942 Bacteria 6572
53 Ga0207679_10216041 3300025945 Bacteria 1611
54 Ga0207677_10348064 3300026023 Bacteria 1241
55 Ga0207674_10028376 3300026116 Bacteria 5908
56 Ga0209589_1000109 3300027357 Bacteria 83533
57 Ga0209489_100324 3300027361 Bacteria 83533
58 Ga0209489_113026 3300027361 Bacteria 7056
59 Ga0209700_100020 3300027363 Bacteria 235733
60 Ga0209700_100355 3300027363 Bacteria 83533
61 Ga0209282_1000111 3300027666 Bacteria 53376
62 Ga0209974_10017128 3300027876 Bacteria 2404
63 Ga0307515_10000014 3300028794 Bacteria 562358
64 Ga0265328_10000073 3300031239 Bacteria 53715
65 Ga0265328_10000478 3300031239 Bacteria 18560
66 Ga0265328_10006164 3300031239 Bacteria 5100
67 Ga0265329_10008356 3300031242 Bacteria 3933
68 Ga0265331_10000097 3300031250 Bacteria 119610
69 Ga0265331_10003691 3300031250 Bacteria 9746
70 Ga0265331_10004607 3300031250 Bacteria 8562
71 Ga0265327_10001803 3300031251 Bacteria 25135
72 Ga0265327_10011036 3300031251 Bacteria 6281
73 Ga0265327_10018017 3300031251 Bacteria 4395
74 Ga0265316_10000378 3300031344 Bacteria 50609
75 Ga0265316_10063228 3300031344 Bacteria 2870
76 Ga0307408_100011505 3300031548 Bacteria 5845
77 Ga0307514_10001865 3300031649 Bacteria 23265
78 Ga0265342_10052283 3300031712 Bacteria 2436
79 Ga0307516_10000045 3300031730 Bacteria 132787
80 Ga0307412_10039307 3300031911 Bacteria 3053
81 Ga0307414_10062170 3300032004 Bacteria 2648
82 Ga0307411_10080453 3300032005 Bacteria 2240
83 Ga0315911_1000032 3300033442 Bacteria 67819
84 Ga0373931_0088707 3300035691 Bacteria 1719
85 Ga0373937_0065978 3300036401 Bacteria 3333
86 Ga0395905_0338451 3300037471 Bacteria 1396
87 Ga0436361_0472389 3300039447 Bacteria 28663
88 Ga0436361_0500419 3300039447 Bacteria 18953
89 Ga0451841_1006410 3300041498 Bacteria 891
90 Ga0450915_000932 3300042119 Bacteria 1250
91 Ga0450918_003487 3300042531 Bacteria 2918
92 Ga0450893_0014960 3300042532 Bacteria 1305
93 Ga0451577_0166132 3300042876 Bacteria 1988
94 Ga0451577_0498578 3300042876 Bacteria 1105
95 Ga0453684_0022832 3300044712 Bacteria 9261
96 Ga0453684_0424468 3300044712 Bacteria 1484
97 Ga0451576_0026986 3300045051 Bacteria 6171
98 Ga0495590_0043589 3300046457 Bacteria 1564
99 Ga0495633_0024657 3300046558 Bacteria 2970
100 Ga0495625_0000238 3300046660 Bacteria 85959
101 Ga0495660_0187647 3300046810 Bacteria 996
102 Ga0495684_0090619 3300047471 Bacteria 2316
103 Ga0495686_0139240 3300047472 Bacteria 1433
104 Ga0496102_0119293 3300048905 Bacteria 2463
105 Ga0496103_0166147 3300048906 Bacteria 1416
106 Ga0496105_0311284 3300048908 Bacteria 1264
107 Ga0496114_0634652 3300048917 Bacteria 940
108 Ga0496122_0103162 3300048925 Bacteria 1899
109 Ga0496124_0188224 3300048927 Bacteria 1582
110 Ga0496125_0325780 3300048928 Bacteria 929
111 Ga0501300_003269 3300049523 Bacteria 2419
112 Ga0501280_000698 3300049776 Bacteria 7423
113 Ga0501280_001270 3300049776 Bacteria 4873
114 Ga0501282_001885 3300049778 Bacteria 2309
115 Ga0501282_006370 3300049778 Bacteria 1262
116 Ga0501035_0000513 3300049822 Bacteria 43481
117 nmdc:mga07m45_31835_c1 3300050496 Bacteria 2923
118 nmdc:mga07m45_38047_c2 3300050496 Bacteria 2021
119 nmdc:mga07m45_43846_c1 3300050496 Bacteria 2508

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0634652 Ga0496114_0634652_292_918 197
2 3300031251 Ga0265327_10001803 Ga0265327_100018033 221
3 iso_pu_bacteria 2841949485 2841955782 221
4 iso_pu_bacteria 2841966195 2841970161 221
5 iso_pu_bacteria 2841974524 2841977189 221
6 iso_pu_bacteria 2841983080 2841985679 221
7 iso_pu_bacteria 8018127388 8018130824 221
8 3300046457 Ga0495590_0043589 Ga0495590_0043589_55_729 222
9 iso_pu_bacteria 2513237351 2514590528 222
10 iso_pu_bacteria 2874168670 2874172852 222
11 iso_pu_bacteria 2879083081 2879090924 222
12 iso_pu_bacteria 2885305155 2885312464 222
13 iso_pu_bacteria 2885326080 2885333486 222
14 3300041498 Ga0451841_1006410 Ga0451841_1006410_114_791 223
15 3300031239 Ga0265328_10000478 Ga0265328_100004782 224
16 3300031250 Ga0265331_10000097 Ga0265331_1000009753 224
17 3300042531 Ga0450918_003487 Ga0450918_003487_2198_2872 224
18 iso_pu_bacteria 2513237139 2513880321 225
19 iso_pu_bacteria 2528768022 2528858434 225
20 iso_pu_bacteria 2816332527 2818244182 225
21 iso_pu_bacteria 2874612657 2874613889 225
22 iso_pu_bacteria 2874620515 2874625696 225
23 iso_pu_bacteria 2929615660 2929624441 225
24 iso_pu_bacteria 2929624759 2929633716 225
25 iso_pu_bacteria 2933577622 2933586345 225
26 iso_pu_bacteria 8055742211 8055743837 225
27 iso_pu_bacteria 2841957949 2841961470 226
28 iso_pu_bacteria 2847930680 2847932731 226
29 iso_pu_bacteria 3005483717 3005484163 226
30 3300031649 Ga0307514_10001865 Ga0307514_1000186518 227
31 iso_pu_bacteria 2522572158 2523105965 227
32 iso_pu_bacteria 8001845381 8001847950 227
33 3300033442 Ga0315911_1000032 Ga0315911_10000327 228
34 3300042876 Ga0451577_0498578 Ga0451577_0498578_159_890 228
35 3300015262 Ga0182007_10073094 Ga0182007_100730941 229
36 3300037471 Ga0395905_0338451 Ga0395905_0338451_83_952 229
37 3300042876 Ga0451577_0166132 Ga0451577_0166132_1029_1739 229
38 3300049778 Ga0501282_006370 Ga0501282_006370_178_948 229
39 iso_pu_bacteria 2897803580 2897804483 229
40 3300005719 Ga0068861_100498854 Ga0068861_1004988542 230
41 3300049523 Ga0501300_003269 Ga0501300_003269_98_826 230
42 3300049776 Ga0501280_000698 Ga0501280_000698_3009_3737 230
43 3300049778 Ga0501282_001885 Ga0501282_001885_1273_2001 230
44 3300035691 Ga0373931_0088707 Ga0373931_0088707_369_1106 231
45 3300036401 Ga0373937_0065978 Ga0373937_0065978_2412_3146 231
46 3300049776 Ga0501280_001270 Ga0501280_001270_593_1297 231
47 iso_pu_bacteria 2513237146 2513930136 231
48 iso_pu_bacteria 2513237161 2514015451 231
49 iso_pu_bacteria 2599185170 2599414138 231
50 iso_pu_bacteria 2838035591 2838042071 231
51 iso_pu_bacteria 2838122688 2838124921 231
52 iso_pu_bacteria 2906643746 2906644341 231
53 iso_pu_bacteria 3004167301 3004174991 231
54 iso_pu_bacteria 3004334049 3004341960 231
55 3300021361 Ga0213872_10001299 Ga0213872_1000129919 232
56 3300021361 Ga0213872_10037184 Ga0213872_100371842 232
57 3300039447 Ga0436361_0472389 Ga0436361_0472389_15326_16033 232
58 iso_pu_bacteria 2513237305 2514422329 232
59 iso_pu_bacteria 2721755686 2723571788 232
60 iso_pu_bacteria 2891088606 2891092625 232
61 iso_pu_bacteria 2824600985 2824601428 233
62 iso_pu_bacteria 2824609381 2824613281 233
63 iso_pu_bacteria 2824653114 2824656676 233
64 iso_pu_bacteria 2824671348 2824672354 233
65 iso_pu_bacteria 2824687955 2824689206 233
66 iso_pu_bacteria 2824696289 2824697244 233
67 iso_pu_bacteria 2824732956 2824733110 233
68 iso_pu_bacteria 2824746037 2824747145 233
69 iso_pu_bacteria 2904690495 2904692844 233
70 iso_pu_bacteria 2908756301 2908758256 233
71 iso_pu_bacteria 2908775508 2908777573 233
72 iso_pu_bacteria 2922393267 2922394163 233
73 3300042119 Ga0450915_000932 Ga0450915_000932_287_1012 234
74 3300042532 Ga0450893_0014960 Ga0450893_0014960_226_951 234
75 3300049822 Ga0501035_0000513 Ga0501035_0000513_15214_15936 234
76 iso_pu_bacteria 2903748898 2903758228 234
77 iso_pu_bacteria 2908739725 2908745467 234
78 3300027361 Ga0209489_113026 Ga0209489_1130263 235
79 3300027363 Ga0209700_100020 Ga0209700_100020192 235
80 3300048925 Ga0496122_0103162 Ga0496122_0103162_803_1597 235
81 iso_pu_bacteria 2511231221 2512034974 235
82 iso_pu_bacteria 2791355199 2793081108 235
83 iso_pu_bacteria 8054002106 8054008936 235
84 iso_pu_bacteria 8055617313 8055624012 235
85 3300031239 Ga0265328_10000073 Ga0265328_100000737 236
86 3300031239 Ga0265328_10006164 Ga0265328_100061645 236
87 3300031242 Ga0265329_10008356 Ga0265329_100083562 236
88 3300031250 Ga0265331_10003691 Ga0265331_1000369112 236
89 3300031250 Ga0265331_10004607 Ga0265331_1000460712 236
90 3300031251 Ga0265327_10011036 Ga0265327_100110362 236
91 3300031251 Ga0265327_10018017 Ga0265327_100180172 236
92 3300031344 Ga0265316_10000378 Ga0265316_100003787 236
93 3300031344 Ga0265316_10063228 Ga0265316_100632282 236
94 3300031712 Ga0265342_10052283 Ga0265342_100522833 236
95 iso_pu_bacteria 2721755755 2723843988 236
96 iso_pu_bacteria 2824661429 2824661710 236
97 iso_pu_bacteria 2824679649 2824680658 236
98 iso_pu_bacteria 2874604998 2874612026 236
99 iso_pu_bacteria 2889033259 2889041845 236
100 iso_pu_bacteria 2922386360 2922386603 236
101 iso_pu_bacteria 8056673599 8056680062 236
102 3300046558 Ga0495633_0024657 Ga0495633_0024657_1931_2677 237
103 3300048927 Ga0496124_0188224 Ga0496124_0188224_208_924 237
104 iso_pu_bacteria 2513237141 2513894679 237
105 iso_pu_bacteria 2585428062 2587759794 237
106 iso_pu_bacteria 2842333319 2842337414 237
107 iso_pu_bacteria 2876808645 2876811997 237
108 iso_pu_bacteria 2879110137 2879113949 237
109 iso_pu_bacteria 2922361189 2922366339 237
110 iso_pu_bacteria 3005474847 3005482692 237
111 iso_pu_bacteria 8006984368 8006990291 237
112 iso_pu_bacteria 8006994254 8006999320 237
113 3300009545 Ga0105237_10002315 Ga0105237_1000231518 238
114 3300025914 Ga0207671_10003143 Ga0207671_1000314310 238
115 3300048928 Ga0496125_0325780 Ga0496125_0325780_46_762 238
116 iso_pu_bacteria 2513237145 2513922056 239
117 iso_pu_bacteria 2517572143 2517890272 239
118 iso_pu_bacteria 2643221660 2644338290 239
119 iso_pu_bacteria 2738541277 2738721221 239
120 iso_pu_bacteria 2738543019 2739280420 239
121 iso_pu_bacteria 2791355197 2793067757 239
122 3300046810 Ga0495660_0187647 Ga0495660_0187647_163_891 240
123 iso_pu_bacteria 2935608549 2935613909 240
124 iso_pu_bacteria 2935703347 2935712704 240
125 iso_pu_bacteria 2935837841 2935843501 240
126 iso_pu_bacteria 2935873716 2935882091 240
127 iso_pu_bacteria 2935908558 2935916071 240
128 iso_pu_bacteria 2935926038 2935933554 240
129 iso_pu_bacteria 2935934488 2935942081 240
130 iso_pu_bacteria 2935942939 2935950530 240
131 iso_pu_bacteria 2935951376 2935958990 240
132 iso_pu_bacteria 2935959822 2935967084 240
133 iso_pu_bacteria 2935967501 2935975050 240
134 iso_pu_bacteria 2935992306 2935999962 240
135 iso_pu_bacteria 8019576017 8019585790 240
136 iso_pu_bacteria 8019586578 8019593777 240
137 iso_pu_bacteria 8019597564 8019597699 240
138 iso_pu_bacteria 8019608314 8019610682 240
139 iso_pu_bacteria 8019687851 8019692916 240
140 3300025292 Ga0209676_1022587 Ga0209676_10225874 241
141 3300025297 Ga0209758_1000068 Ga0209758_1000068238 241
142 3300027876 Ga0209974_10017128 Ga0209974_100171284 241
143 3300028794 Ga0307515_10000014 Ga0307515_10000014267 241
144 3300044712 Ga0453684_0424468 Ga0453684_0424468_480_1211 241
145 3300047471 Ga0495684_0090619 Ga0495684_0090619_776_1540 241
146 3300047472 Ga0495686_0139240 Ga0495686_0139240_48_782 241
147 iso_pu_bacteria 2513237094 2513641703 241
148 iso_pu_bacteria 2513237095 2513650403 241
149 iso_pu_bacteria 2816332527 2818238514 241
150 iso_pu_bacteria 2841957949 2841962500 241
151 iso_pu_bacteria 2874620515 2874626533 241
152 iso_pu_bacteria 2879099564 2879100412 241
153 iso_pu_bacteria 2885366525 2885369519 241
154 iso_pu_bacteria 2888378607 2888381171 241
155 iso_pu_bacteria 2904666416 2904671874 241
156 iso_pu_bacteria 2906626472 2906629263 241
157 iso_pu_bacteria 2932794094 2932801143 241
158 iso_pu_bacteria 2932801729 2932809125 241
159 iso_pu_bacteria 2932809354 2932815998 241
160 iso_pu_bacteria 2932818245 2932825332 241
161 iso_pu_bacteria 2932828146 2932834941 241
162 iso_pu_bacteria 2935616580 2935625108 241
163 iso_pu_bacteria 2935638405 2935647358 241
164 iso_pu_bacteria 2935648319 2935652660 241
165 iso_pu_bacteria 2935656913 2935661355 241
166 iso_pu_bacteria 2935665750 2935673789 241
167 iso_pu_bacteria 2935801545 2935809622 241
168 iso_pu_bacteria 2935810662 2935818623 241
169 iso_pu_bacteria 2935819856 2935827400 241
170 iso_pu_bacteria 2935827899 2935836753 241
171 iso_pu_bacteria 2935847175 2935854684 241
172 iso_pu_bacteria 2935855204 2935863737 241
173 iso_pu_bacteria 2935883170 2935889659 241
174 iso_pu_bacteria 2935984226 2935991371 241
175 iso_pu_bacteria 2936002035 2936010731 241
176 iso_pu_bacteria 2936011229 2936015642 241
177 iso_pu_bacteria 2936019824 2936024276 241
178 iso_pu_bacteria 2936028420 2936033527 241
179 iso_pu_bacteria 2936037263 2936045346 241
180 iso_pu_bacteria 2936046547 2936051385 241
181 iso_pu_bacteria 2936055302 2936063503 241
182 iso_pu_bacteria 2941538514 2941547323 241
183 iso_pu_bacteria 3005587118 3005589802 241
184 iso_pu_bacteria 8016511872 8016512218 241
185 iso_pu_bacteria 8017057580 8017066810 241
186 3300003784 Ga0055534_1000014 Ga0055534_100001460 242
187 3300003792 Ga0055540_1012494 Ga0055540_10124945 242
188 3300005328 Ga0070676_10007312 Ga0070676_100073125 242
189 3300005331 Ga0070670_100089595 Ga0070670_1000895951 242
190 3300005334 Ga0068869_100027586 Ga0068869_1000275863 242
191 3300005354 Ga0070675_100018627 Ga0070675_1000186275 242
192 3300005367 Ga0070667_100091276 Ga0070667_1000912763 242
193 3300005456 Ga0070678_100090923 Ga0070678_1000909234 242
194 3300005457 Ga0070662_100484707 Ga0070662_1004847072 242
195 3300005543 Ga0070672_100044352 Ga0070672_1000443523 242
196 3300005564 Ga0070664_100144247 Ga0070664_1001442472 242
197 3300005577 Ga0068857_100017286 Ga0068857_1000172864 242
198 3300005840 Ga0068870_10017129 Ga0068870_100171293 242
199 3300006048 Ga0075363_100213884 Ga0075363_1002138842 242
200 3300006058 Ga0075432_10032380 Ga0075432_100323803 242
201 3300006353 Ga0075370_10066062 Ga0075370_100660623 242
202 3300006353 Ga0075370_10129278 Ga0075370_101292782 242
203 3300006353 Ga0075370_10133717 Ga0075370_101337171 242
204 3300006946 Ga0079104_1052833 Ga0079104_10528332 242
205 3300006948 Ga0099826_10000072 Ga0099826_100000725 242
206 3300009098 Ga0105245_10123412 Ga0105245_101234122 242
207 3300009148 Ga0105243_10105599 Ga0105243_101055992 242
208 3300009545 Ga0105237_11060650 Ga0105237_110606501 242
209 3300010375 Ga0105239_10870694 Ga0105239_108706941 242
210 3300011119 Ga0105246_10131810 Ga0105246_101318102 242
211 3300013100 Ga0157373_10009228 Ga0157373_100092287 242
212 3300013308 Ga0157375_10029276 Ga0157375_100292764 242
213 3300014497 Ga0182008_10057274 Ga0182008_100572743 242
214 3300015261 Ga0182006_1030961 Ga0182006_10309614 242
215 3300025263 Ga0209565_1000047 Ga0209565_1000047159 242
216 3300025273 Ga0209673_1000079 Ga0209673_100007960 242
217 3300025291 Ga0209675_1000046 Ga0209675_1000046159 242
218 3300025299 Ga0209256_1041594 Ga0209256_10415942 242
219 3300025303 Ga0209051_1000049 Ga0209051_1000049204 242
220 3300025303 Ga0209051_1006343 Ga0209051_100634311 242
221 3300025303 Ga0209051_1030835 Ga0209051_10308351 242
222 3300025907 Ga0207645_10001993 Ga0207645_100019934 242
223 3300025925 Ga0207650_10068730 Ga0207650_100687302 242
224 3300025926 Ga0207659_10009144 Ga0207659_100091444 242
225 3300025931 Ga0207644_10022422 Ga0207644_100224224 242
226 3300025933 Ga0207706_10251613 Ga0207706_102516133 242
227 3300025935 Ga0207709_10346558 Ga0207709_103465581 242
228 3300025940 Ga0207691_10056739 Ga0207691_100567393 242
229 3300025942 Ga0207689_10014999 Ga0207689_100149997 242
230 3300025945 Ga0207679_10216041 Ga0207679_102160412 242
231 3300026023 Ga0207677_10348064 Ga0207677_103480642 242
232 3300026116 Ga0207674_10028376 Ga0207674_100283764 242
233 3300027357 Ga0209589_1000109 Ga0209589_100010944 242
234 3300027361 Ga0209489_100324 Ga0209489_10032444 242
235 3300027363 Ga0209700_100355 Ga0209700_10035544 242
236 3300027666 Ga0209282_1000111 Ga0209282_10001115 242
237 3300031548 Ga0307408_100011505 Ga0307408_1000115059 242
238 3300031730 Ga0307516_10000045 Ga0307516_10000045106 242
239 3300031911 Ga0307412_10039307 Ga0307412_100393072 242
240 3300032004 Ga0307414_10062170 Ga0307414_100621703 242
241 3300032005 Ga0307411_10080453 Ga0307411_100804532 242
242 3300039447 Ga0436361_0500419 Ga0436361_0500419_9227_9979 242
243 3300044712 Ga0453684_0022832 Ga0453684_0022832_4312_5055 242
244 3300045051 Ga0451576_0026986 Ga0451576_0026986_5170_5913 242
245 3300046660 Ga0495625_0000238 Ga0495625_0000238_82053_82781 242
246 3300048905 Ga0496102_0119293 Ga0496102_0119293_1292_2020 242
247 3300048906 Ga0496103_0166147 Ga0496103_0166147_406_1134 242
248 3300048908 Ga0496105_0311284 Ga0496105_0311284_13_741 242
249 3300050496 nmdc:mga07m45_31835_c1 nmdc:mga07m45_31835_c1_1540_2268 242
250 3300050496 nmdc:mga07m45_38047_c2 nmdc:mga07m45_38047_c2_493_1221 242
251 3300050496 nmdc:mga07m45_43846_c1 nmdc:mga07m45_43846_c1_678_1421 242

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01292

Ni_hydr_CYTB

Prokaryotic cytochrome b561

20

226

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6g94-assembly1.cif.gz_B structure of e. coli hydrogenase-1 c19g variant in complex with cytochrome b 0.7875 31 217
6g94-assembly1.cif.gz_A structure of e. coli hydrogenase-1 c19g variant in complex with cytochrome b 0.7873 31 222
6g94-assembly1.cif.gz_A structure of e. coli hydrogenase-1 c19g variant in complex with cytochrome b 0.7787 31 222
6g94-assembly1.cif.gz_B structure of e. coli hydrogenase-1 c19g variant in complex with cytochrome b 0.7783 31 217
4gd3-assembly1.cif.gz_A structure of e. coli hydrogenase-1 in complex with cytochrome b 0.7705 25 224
ID Description Score Start End Superfamily
af_P0AAM1_1_207_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.8895 21 222 1.20.950.20
af_P0AAM1_1_207_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.8651 21 222 1.20.950.20
af_E7F0D3_7_136_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.8586 36 94 1.20.58.70
af_Q2RAZ6_30_149_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.847 35 96 1.20.140.40
3arcZ00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Photosystem II PsbZ, reaction centre 0.8 39 89 1.10.287.740
ID Description Score Start End GO Terms
AF-A0A529L7D9-F1-model_v4 DUF4405 domain-containing protein 0.9509 114 228 GO:0005506
GO:0005886
GO:0009055
GO:0020037
GO:0022904
AF-A0A023XY34-F1-model_v4 deleted 0.9298 66 230
AF-A0A529L7D9-F1-model_v4 DUF4405 domain-containing protein 0.9275 114 228 GO:0005506
GO:0005886
GO:0009055
GO:0020037
GO:0022904
AF-T1DAS2-F1-model_v4 Nickel-dependent hydrogenase b-type cytochrome subunit 0.9226 28 224 GO:0005506
GO:0005886
GO:0009055
GO:0020037
GO:0022904
AF-A0A7R8WX69-F1-model_v4 Uncharacterized protein 0.9206 42 169 GO:0005506
GO:0005886
GO:0009055
GO:0020037
GO:0022904

Feature Viewer

pLDDT pTM Quality
75.04 0.71 High
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Predicted Structure (AlphaFold2)

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