F362629

General Info

Members Datasets Scaffolds Average Seq Length
251 165 502 292

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0008731|Ga0466970_0008731_237_1169
Length 310
Sequence LPELPEVEVVRLGLERHVVGATLERVQVLHERPVRRHPGGIAGFAADLTGRRVEAARRRGKYLWLPLDNGDALLAHLGMSGQMLVQPADAPAERHLRVRLTLDFHPSTGTSTPLHRGGSAGITGSPVIPAPRELRFVDQRMFGGLSIAVGGAELPHEIAHIARDPLDPEFDDAAFVARLRKRTSAVKRLLLDQTLISGVGNIYADEALWRSRLHGERPGDRLTRAQATELLGHVREVMTEALAQGGTSFDALYVNVNGQSGYFERSLNAYGRDEQPCRRCGTPMRRIAFMNRSSYFCPRCQPAPRRRRGI

Samples

Sample ID Description Type Environment
1 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
43 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
86 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
87 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
88 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
89 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
90 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
139 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
140 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
143 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
144 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
145 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
146 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
147 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 2643221576 Nocardioides sp. Root614 Isolate Unclassified
151 2643221590 Nocardioides sp. Root682 Isolate Unclassified
152 2643221604 Nocardioides sp. Root190 Isolate Unclassified
153 2643221615 Nocardioides sp. Root224 Isolate Unclassified
154 2643221617 Nocardioides sp. Root79 Isolate Unclassified
155 2643221620 Nocardioides sp. Root240 Isolate Unclassified
156 2643221641 Nocardioides sp. Root122 Isolate Unclassified
157 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
158 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
159 2738541305 Nocardioides sp. CF167 Isolate Unclassified
160 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
161 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
162 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
163 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
164 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
165 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.23
Metatranscriptomes 0.4
Isolates 6.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.52
Nodule 0
Rhizoplane 6.77
Rhizosphere 68.13
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466970_0008731 3300044765 Bacteria 5105
2 JGI24738J21930_10003685 3300002075 Bacteria 3836
3 JGI24744J21845_10012112 3300002077 Bacteria 1754
4 Ga0070683_100106809 3300005329 Bacteria 2639
5 Ga0070683_100271404 3300005329 Bacteria 1613
6 Ga0068868_100043547 3300005338 Bacteria 3506
7 Ga0068868_100229642 3300005338 Bacteria 1556
8 Ga0070689_100284810 3300005340 Bacteria 1372
9 Ga0070692_10002957 3300005345 Bacteria 6760
10 Ga0070674_100008568 3300005356 Bacteria 6098
11 Ga0070673_100410817 3300005364 Bacteria 1212
12 Ga0070659_100079856 3300005366 Bacteria 2611
13 Ga0070667_100006761 3300005367 Bacteria 9524
14 Ga0070667_100120217 3300005367 Bacteria 2284
15 Ga0070701_10001119 3300005438 Bacteria 9793
16 Ga0070700_100000496 3300005441 Bacteria 19728
17 Ga0070663_100240820 3300005455 Bacteria 1428
18 Ga0068867_100005026 3300005459 Bacteria 9328
19 Ga0070707_100384220 3300005468 Bacteria 1364
20 Ga0070698_100000980 3300005471 Bacteria 31367
21 Ga0068853_100051059 3300005539 Bacteria 3559
22 Ga0070664_100111588 3300005564 Bacteria 2387
23 Ga0070702_100032376 3300005615 Bacteria 2868
24 Ga0068852_100003702 3300005616 Bacteria 10716
25 Ga0068861_100006281 3300005719 Bacteria 8086
26 Ga0068851_10099708 3300005834 Bacteria 1540
27 Ga0068870_10012266 3300005840 Bacteria 4001
28 Ga0068870_10026743 3300005840 Bacteria 2879
29 Ga0068860_100008161 3300005843 Bacteria 10424
30 Ga0075365_10000269 3300006038 Bacteria 17931
31 Ga0075365_10004574 3300006038 Bacteria 7357
32 Ga0075365_10015267 3300006038 Bacteria 4641
33 Ga0075365_10043482 3300006038 Bacteria 2941
34 Ga0075365_10053044 3300006038 Bacteria 2684
35 Ga0075365_10101081 3300006038 Bacteria 1974
36 Ga0075365_10137965 3300006038 Bacteria 1691
37 Ga0075365_10220251 3300006038 Bacteria 1331
38 Ga0075365_10234548 3300006038 Bacteria 1289
39 Ga0075365_10349363 3300006038 Bacteria 1042
40 Ga0075368_10000414 3300006042 Bacteria 12548
41 Ga0075368_10021576 3300006042 Bacteria 2447
42 Ga0075368_10032739 3300006042 Bacteria 2020
43 Ga0075363_100016103 3300006048 Bacteria 3689
44 Ga0075363_100019841 3300006048 Bacteria 3365
45 Ga0075364_10013034 3300006051 Bacteria 5101
46 Ga0075364_10054063 3300006051 Bacteria 2625
47 Ga0075364_10085467 3300006051 Bacteria 2089
48 Ga0075364_10094941 3300006051 Bacteria 1982
49 Ga0075364_10097995 3300006051 Bacteria 1950
50 Ga0075367_10018449 3300006178 Bacteria 3850
51 Ga0075367_10048055 3300006178 Bacteria 2512
52 Ga0075367_10212323 3300006178 Bacteria 1210
53 Ga0075370_10011857 3300006353 Bacteria 4590
54 Ga0075370_10028153 3300006353 Bacteria 3122
55 Ga0068871_100253662 3300006358 Bacteria 1533
56 Ga0068865_100209794 3300006881 Bacteria 1517
57 Ga0105247_10087102 3300009101 Bacteria 1977
58 Ga0105243_10018670 3300009148 Bacteria 5255
59 Ga0105243_10140060 3300009148 Bacteria 2063
60 Ga0105243_10432650 3300009148 Bacteria 1230
61 Ga0105238_10253912 3300009551 Bacteria 1737
62 Ga0105249_10010039 3300009553 Bacteria 8309
63 Ga0157372_10012444 3300013307 Bacteria 9070
64 Ga0157372_10807269 3300013307 Bacteria 1090
65 Ga0157375_10491414 3300013308 Bacteria 1392
66 Ga0163163_10036720 3300014325 Bacteria 4761
67 Ga0157380_10047915 3300014326 Bacteria 3364
68 Ga0157380_10204608 3300014326 Bacteria 1754
69 Ga0157377_10013632 3300014745 Bacteria 4119
70 Ga0206353_11672161 3300020082 Bacteria 2542
71 Ga0207688_10005388 3300025901 Bacteria 6953
72 Ga0207647_10043078 3300025904 Bacteria 2826
73 Ga0207643_10002867 3300025908 Bacteria 9300
74 Ga0207662_10080439 3300025918 Bacteria 1987
75 Ga0207657_10032566 3300025919 Bacteria 4707
76 Ga0207646_10379775 3300025922 Bacteria 1276
77 Ga0207687_10138242 3300025927 Bacteria 1845
78 Ga0207687_10221127 3300025927 Bacteria 1491
79 Ga0207690_10058929 3300025932 Bacteria 2600
80 Ga0207690_10372057 3300025932 Bacteria 1134
81 Ga0207709_10101185 3300025935 Bacteria 1906
82 Ga0207704_10219121 3300025938 Bacteria 1407
83 Ga0207691_10001204 3300025940 Bacteria 25759
84 Ga0207691_10081863 3300025940 Bacteria 2901
85 Ga0207711_10037674 3300025941 Bacteria 4109
86 Ga0207661_10015734 3300025944 Bacteria 5572
87 Ga0207661_10112055 3300025944 Bacteria 2309
88 Ga0207679_10115014 3300025945 Bacteria 2131
89 Ga0207667_10117013 3300025949 Bacteria 2747
90 Ga0207712_10022486 3300025961 Bacteria 4153
91 Ga0207668_10127495 3300025972 Bacteria 1938
92 Ga0207640_10005664 3300025981 Bacteria 6806
93 Ga0207658_10076277 3300025986 Bacteria 2553
94 Ga0207678_10064318 3300026067 Bacteria 3152
95 Ga0207708_10000431 3300026075 Bacteria 32602
96 Ga0207708_10155616 3300026075 Bacteria 1802
97 Ga0207648_10002197 3300026089 Bacteria 21185
98 Ga0207675_100001152 3300026118 Bacteria 26247
99 Ga0207683_10259300 3300026121 Bacteria 1587
100 Ga0207698_10020198 3300026142 Bacteria 4579
101 Ga0209813_10000714 3300027866 Bacteria 7606
102 Ga0268264_10000242 3300028381 Bacteria 103492
103 Ga0307408_100122851 3300031548 Bacteria 2014
104 Ga0307408_100269238 3300031548 Bacteria 1414
105 Ga0307413_10016120 3300031824 Bacteria 3850
106 Ga0307410_10068921 3300031852 Bacteria 2445
107 Ga0307406_10162749 3300031901 Bacteria 1606
108 Ga0307407_10066082 3300031903 Bacteria 2132
109 Ga0307409_100109100 3300031995 Bacteria 2316
110 Ga0307409_100155048 3300031995 Bacteria 1994
111 Ga0307416_100249795 3300032002 Bacteria 1725
112 Ga0307414_10424523 3300032004 Bacteria 1160
113 Ga0307415_100001519 3300032126 Bacteria 11133
114 Ga0307415_100014338 3300032126 Bacteria 4657
115 Ga0307415_100119785 3300032126 Bacteria 1971
116 Ga0373938_0028712 3300034957 Bacteria 1178
117 Ga0395900_0119005 3300037418 Bacteria 2711
118 Ga0395898_0069820 3300037466 Bacteria 3398
119 Ga0395905_0164741 3300037471 Bacteria 2083
120 Ga0395901_0019278 3300038443 Bacteria 6974
121 Ga0395901_0021405 3300038443 Bacteria 6625
122 Ga0439446_0023760 3300042156 Bacteria 1745
123 Ga0439434_0007753 3300042435 Bacteria 3147
124 Ga0466972_0016475 3300044658 Bacteria 3697
125 Ga0466965_0008341 3300044683 Bacteria 4792
126 Ga0466965_0062054 3300044683 Bacteria 1869
127 Ga0466966_0087010 3300044684 Bacteria 1942
128 Ga0466961_0101382 3300044693 Bacteria 1813
129 Ga0466963_0076621 3300044694 Bacteria 2258
130 Ga0466964_0006318 3300044706 Bacteria 4411
131 Ga0466971_0032176 3300044719 Bacteria 2350
132 Ga0466970_0041856 3300044765 Bacteria 2435
133 Ga0466957_0010592 3300044842 Bacteria 5299
134 Ga0466957_0027956 3300044842 Bacteria 3354
135 Ga0466957_0109949 3300044842 Bacteria 1747
136 Ga0466960_0001334 3300044901 Bacteria 8970
137 Ga0466960_0019534 3300044901 Bacteria 2988
138 Ga0466959_0286924 3300045049 Bacteria 1129
139 Ga0466958_0056730 3300045836 Bacteria 2380
140 Ga0466958_0115660 3300045836 Bacteria 1676
141 Ga0466967_0036748 3300045976 Bacteria 4184
142 Ga0466967_0149124 3300045976 Bacteria 2184
143 Ga0496100_0011172 3300048903 Bacteria 5103
144 Ga0496100_0017801 3300048903 Bacteria 4203
145 Ga0496101_0042960 3300048904 Bacteria 3228
146 Ga0496101_0098182 3300048904 Bacteria 2188
147 Ga0496102_0263843 3300048905 Bacteria 1624
148 Ga0496102_0293514 3300048905 Bacteria 1532
149 Ga0496103_0022755 3300048906 Bacteria 3775
150 Ga0496106_0113689 3300048909 Bacteria 2110
151 Ga0496107_0250950 3300048910 Bacteria 1316
152 Ga0496108_0049837 3300048911 Bacteria 3503
153 Ga0496110_0023556 3300048913 Bacteria 5238
154 Ga0496110_0257427 3300048913 Bacteria 1589
155 Ga0496113_0066802 3300048916 Bacteria 2725
156 Ga0496114_0022266 3300048917 Bacteria 5164
157 Ga0496114_0022273 3300048917 Bacteria 5163
158 Ga0496114_0099178 3300048917 Bacteria 2484
159 Ga0496114_0119949 3300048917 Bacteria 2261
160 Ga0501031_0014423 3300049568 Bacteria 5137
161 Ga0501031_0028925 3300049568 Bacteria 3613
162 Ga0501032_0024131 3300049569 Bacteria 4199
163 Ga0501033_0003994 3300049570 Bacteria 11936
164 Ga0501033_0274338 3300049570 Bacteria 1192
165 Ga0501036_0003312 3300049572 Bacteria 12859
166 Ga0501036_0018927 3300049572 Bacteria 5777
167 Ga0501037_0010008 3300049573 Bacteria 6956
168 Ga0501037_0017022 3300049573 Bacteria 5348
169 Ga0501038_0020321 3300049574 Bacteria 5972
170 Ga0501039_0033400 3300049575 Bacteria 3967
171 Ga0501039_0079098 3300049575 Bacteria 2558
172 Ga0501039_0192914 3300049575 Bacteria 1602
173 Ga0501040_0043234 3300049576 Bacteria 3070
174 Ga0501041_0032806 3300049577 Bacteria 3139
175 Ga0501041_0212012 3300049577 Bacteria 1215
176 Ga0501042_0000189 3300049578 Bacteria 28855
177 Ga0501043_0017610 3300049579 Bacteria 5603
178 Ga0501043_0022172 3300049579 Bacteria 4982
179 Ga0501046_0002358 3300049580 Bacteria 17774
180 Ga0501046_0009622 3300049580 Bacteria 8334
181 Ga0501048_0008058 3300049582 Bacteria 7979
182 Ga0501048_0027985 3300049582 Bacteria 4094
183 Ga0501067_0001209 3300049583 Bacteria 14007
184 Ga0501067_0004050 3300049583 Bacteria 8081
185 Ga0501067_0011854 3300049583 Bacteria 4832
186 Ga0501068_0021766 3300049584 Bacteria 3747
187 Ga0501068_0108236 3300049584 Bacteria 1727
188 Ga0501069_0002979 3300049585 Bacteria 8714
189 Ga0501069_0039627 3300049585 Bacteria 2603
190 Ga0501069_0101712 3300049585 Bacteria 1632
191 Ga0501070_0021716 3300049586 Bacteria 5382
192 Ga0501070_0024483 3300049586 Bacteria 5063
193 Ga0501070_0452031 3300049586 Bacteria 1036
194 Ga0501071_0001973 3300049587 Bacteria 12253
195 Ga0501071_0434418 3300049587 Bacteria 1004
196 Ga0501072_0019977 3300049588 Bacteria 5186
197 Ga0501072_0028160 3300049588 Bacteria 4386
198 Ga0501072_0262412 3300049588 Bacteria 1375
199 Ga0501073_0017359 3300049589 Bacteria 5213
200 Ga0501074_0296494 3300049590 Bacteria 1149
201 Ga0501075_0007696 3300049591 Bacteria 7480
202 Ga0501076_0003620 3300049592 Bacteria 10848
203 Ga0501079_0147085 3300049741 Bacteria 1836
204 Ga0501080_0050223 3300049742 Bacteria 3883
205 Ga0501080_0111218 3300049742 Bacteria 2539
206 Ga0501081_0037329 3300049743 Bacteria 3315
207 Ga0501045_0009089 3300049824 Bacteria 6943
208 Ga0501045_0058814 3300049824 Bacteria 2815
209 Ga0501045_0153128 3300049824 Bacteria 1716
210 nmdc:mga03n38_1341_c1 3300050490 Bacteria 6962
211 nmdc:mga03n38_4396_c1 3300050490 Bacteria 4665
212 nmdc:mga00v17_139420_c1 3300050491 Bacteria 1554
213 nmdc:mga00v17_64982_c1 3300050491 Bacteria 2250
214 nmdc:mga00v17_87890_c1 3300050491 Bacteria 1948
215 nmdc:mga0yw44_10740_c1 3300050492 Bacteria 4692
216 nmdc:mga0yw44_124894_c1 3300050492 Bacteria 1661
217 nmdc:mga0yw44_13808_c1 3300050492 Bacteria 4266
218 nmdc:mga0yw44_19090_c1 3300050492 Bacteria 3773
219 nmdc:mga0yw44_26667_c1 3300050492 Bacteria 3304
220 nmdc:mga0yw44_2850_c1 3300050492 Bacteria 7517
221 nmdc:mga0yw44_32429_c1 3300050492 Bacteria 3044
222 nmdc:mga0yw44_50320_c1 3300050492 Bacteria 2519
223 nmdc:mga0yw44_810_c1 3300050492 Bacteria 10730
224 nmdc:mga06z11_270507_c1 3300050494 Bacteria 1005
225 nmdc:mga04h51_2152_c1 3300050495 Bacteria 4614
226 nmdc:mga07m45_7354_c1 3300050496 Bacteria 5623
227 Ga0500644_0000106 3300053088 Bacteria 52751
228 Ga0500556_0001871 3300053104 Bacteria 7563
229 Ga0500593_000571 3300053117 Bacteria 14163
230 Ga0500628_006706 3300053129 Bacteria 1954
231 Ga0500568_0047627 3300053139 Bacteria 1698
232 Ga0500573_0021566 3300053140 Bacteria 3693
233 Ga0466962_0022381 3300061719 Bacteria 3037
234 Ga0466962_0028716 3300061719 Bacteria 2664
235 Ga0530510_0064630 3300061734 Bacteria 2650
236 2643893161 2643221576 Bacteria 5214352
237 2643961780 2643221590 Bacteria 5214697
238 2644034114 2643221604 Bacteria 5014917
239 2644089848 2643221615 Bacteria 5487866
240 2644102512 2643221617 Bacteria 5139111
241 2644118175 2643221620 Bacteria 5134593
242 2644229118 2643221641 Bacteria 4490190
243 2644319693 2643221657 Bacteria 5490246
244 2676478548 2675903058 Bacteria 6822861
245 2738871320 2738541305 Bacteria 4910150
246 2809195485 2808606439 Bacteria 5952208
247 2811844163 2808606982 Bacteria 7791042
248 2812333823 2811994874 Bacteria 5367947
249 2827629608 2827628540 Bacteria 6858585
250 2855387598 2855386786 Bacteria 4752232
251 2891972015 2891968417 Bacteria 5821697
252 Ga0466970_0008731
253 JGI24738J21930_10003685
254 JGI24744J21845_10012112
255 Ga0070683_100106809
256 Ga0070683_100271404
257 Ga0068868_100043547
258 Ga0068868_100229642
259 Ga0070689_100284810
260 Ga0070692_10002957
261 Ga0070674_100008568
262 Ga0070673_100410817
263 Ga0070659_100079856
264 Ga0070667_100006761
265 Ga0070667_100120217
266 Ga0070701_10001119
267 Ga0070700_100000496
268 Ga0070663_100240820
269 Ga0068867_100005026
270 Ga0070707_100384220
271 Ga0070698_100000980
272 Ga0068853_100051059
273 Ga0070664_100111588
274 Ga0070702_100032376
275 Ga0068852_100003702
276 Ga0068861_100006281
277 Ga0068851_10099708
278 Ga0068870_10012266
279 Ga0068870_10026743
280 Ga0068860_100008161
281 Ga0075365_10000269
282 Ga0075365_10004574
283 Ga0075365_10015267
284 Ga0075365_10043482
285 Ga0075365_10053044
286 Ga0075365_10101081
287 Ga0075365_10137965
288 Ga0075365_10220251
289 Ga0075365_10234548
290 Ga0075365_10349363
291 Ga0075368_10000414
292 Ga0075368_10021576
293 Ga0075368_10032739
294 Ga0075363_100016103
295 Ga0075363_100019841
296 Ga0075364_10013034
297 Ga0075364_10054063
298 Ga0075364_10085467
299 Ga0075364_10094941
300 Ga0075364_10097995
301 Ga0075367_10018449
302 Ga0075367_10048055
303 Ga0075367_10212323
304 Ga0075370_10011857
305 Ga0075370_10028153
306 Ga0068871_100253662
307 Ga0068865_100209794
308 Ga0105247_10087102
309 Ga0105243_10018670
310 Ga0105243_10140060
311 Ga0105243_10432650
312 Ga0105238_10253912
313 Ga0105249_10010039
314 Ga0157372_10012444
315 Ga0157372_10807269
316 Ga0157375_10491414
317 Ga0163163_10036720
318 Ga0157380_10047915
319 Ga0157380_10204608
320 Ga0157377_10013632
321 Ga0206353_11672161
322 Ga0207688_10005388
323 Ga0207647_10043078
324 Ga0207643_10002867
325 Ga0207662_10080439
326 Ga0207657_10032566
327 Ga0207646_10379775
328 Ga0207687_10138242
329 Ga0207687_10221127
330 Ga0207690_10058929
331 Ga0207690_10372057
332 Ga0207709_10101185
333 Ga0207704_10219121
334 Ga0207691_10001204
335 Ga0207691_10081863
336 Ga0207711_10037674
337 Ga0207661_10015734
338 Ga0207661_10112055
339 Ga0207679_10115014
340 Ga0207667_10117013
341 Ga0207712_10022486
342 Ga0207668_10127495
343 Ga0207640_10005664
344 Ga0207658_10076277
345 Ga0207678_10064318
346 Ga0207708_10000431
347 Ga0207708_10155616
348 Ga0207648_10002197
349 Ga0207675_100001152
350 Ga0207683_10259300
351 Ga0207698_10020198
352 Ga0209813_10000714
353 Ga0268264_10000242
354 Ga0307408_100122851
355 Ga0307408_100269238
356 Ga0307413_10016120
357 Ga0307410_10068921
358 Ga0307406_10162749
359 Ga0307407_10066082
360 Ga0307409_100109100
361 Ga0307409_100155048
362 Ga0307416_100249795
363 Ga0307414_10424523
364 Ga0307415_100001519
365 Ga0307415_100014338
366 Ga0307415_100119785
367 Ga0373938_0028712
368 Ga0395900_0119005
369 Ga0395898_0069820
370 Ga0395905_0164741
371 Ga0395901_0019278
372 Ga0395901_0021405
373 Ga0439446_0023760
374 Ga0439434_0007753
375 Ga0466972_0016475
376 Ga0466965_0008341
377 Ga0466965_0062054
378 Ga0466966_0087010
379 Ga0466961_0101382
380 Ga0466963_0076621
381 Ga0466964_0006318
382 Ga0466971_0032176
383 Ga0466970_0041856
384 Ga0466957_0010592
385 Ga0466957_0027956
386 Ga0466957_0109949
387 Ga0466960_0001334
388 Ga0466960_0019534
389 Ga0466959_0286924
390 Ga0466958_0056730
391 Ga0466958_0115660
392 Ga0466967_0036748
393 Ga0466967_0149124
394 Ga0496100_0011172
395 Ga0496100_0017801
396 Ga0496101_0042960
397 Ga0496101_0098182
398 Ga0496102_0263843
399 Ga0496102_0293514
400 Ga0496103_0022755
401 Ga0496106_0113689
402 Ga0496107_0250950
403 Ga0496108_0049837
404 Ga0496110_0023556
405 Ga0496110_0257427
406 Ga0496113_0066802
407 Ga0496114_0022266
408 Ga0496114_0022273
409 Ga0496114_0099178
410 Ga0496114_0119949
411 Ga0501031_0014423
412 Ga0501031_0028925
413 Ga0501032_0024131
414 Ga0501033_0003994
415 Ga0501033_0274338
416 Ga0501036_0003312
417 Ga0501036_0018927
418 Ga0501037_0010008
419 Ga0501037_0017022
420 Ga0501038_0020321
421 Ga0501039_0033400
422 Ga0501039_0079098
423 Ga0501039_0192914
424 Ga0501040_0043234
425 Ga0501041_0032806
426 Ga0501041_0212012
427 Ga0501042_0000189
428 Ga0501043_0017610
429 Ga0501043_0022172
430 Ga0501046_0002358
431 Ga0501046_0009622
432 Ga0501048_0008058
433 Ga0501048_0027985
434 Ga0501067_0001209
435 Ga0501067_0004050
436 Ga0501067_0011854
437 Ga0501068_0021766
438 Ga0501068_0108236
439 Ga0501069_0002979
440 Ga0501069_0039627
441 Ga0501069_0101712
442 Ga0501070_0021716
443 Ga0501070_0024483
444 Ga0501070_0452031
445 Ga0501071_0001973
446 Ga0501071_0434418
447 Ga0501072_0019977
448 Ga0501072_0028160
449 Ga0501072_0262412
450 Ga0501073_0017359
451 Ga0501074_0296494
452 Ga0501075_0007696
453 Ga0501076_0003620
454 Ga0501079_0147085
455 Ga0501080_0050223
456 Ga0501080_0111218
457 Ga0501081_0037329
458 Ga0501045_0009089
459 Ga0501045_0058814
460 Ga0501045_0153128
461 nmdc:mga03n38_1341_c1
462 nmdc:mga03n38_4396_c1
463 nmdc:mga00v17_139420_c1
464 nmdc:mga00v17_64982_c1
465 nmdc:mga00v17_87890_c1
466 nmdc:mga0yw44_10740_c1
467 nmdc:mga0yw44_124894_c1
468 nmdc:mga0yw44_13808_c1
469 nmdc:mga0yw44_19090_c1
470 nmdc:mga0yw44_26667_c1
471 nmdc:mga0yw44_2850_c1
472 nmdc:mga0yw44_32429_c1
473 nmdc:mga0yw44_50320_c1
474 nmdc:mga0yw44_810_c1
475 nmdc:mga06z11_270507_c1
476 nmdc:mga04h51_2152_c1
477 nmdc:mga07m45_7354_c1
478 Ga0500644_0000106
479 Ga0500556_0001871
480 Ga0500593_000571
481 Ga0500628_006706
482 Ga0500568_0047627
483 Ga0500573_0021566
484 Ga0466962_0022381
485 Ga0466962_0028716
486 Ga0530510_0064630
487 2643893161
488 2643961780
489 2644034114
490 2644089848
491 2644102512
492 2644118175
493 2644229118
494 2644319693
495 2676478548
496 2738871320
497 2809195485
498 2811844163
499 2812333823
500 2827629608
501 2855387598
502 2891972015

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06827

zf-FPG_IleRS

Zinc finger found in FPG and IleRS

274

303

0.96

PF06831

H2TH

Formamidopyrimidine-DNA glycosylase H2TH domain

161

251

0.96

PF01149

Fapy_DNA_glyco

Formamidopyrimidine-DNA glycosylase N-terminal domain

1

145

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3sat-assembly1.cif.gz_A mutm slanted complex 6 with r112a mutation 0.8812 2 273
3sat-assembly1.cif.gz_A mutm slanted complex 6 with r112a mutation 0.8747 2 273
3sar-assembly1.cif.gz_A mutm slanted complex 1 0.8728 2 273
7n2u-assembly1.cif.gz_SM elongating 70s ribosome complex in a hybrid-h1 pre-translocation (pre-h1) conformation 0.8699 171 208
3sar-assembly1.cif.gz_A mutm slanted complex 1 0.8665 2 273
ID Description Score Start End Superfamily
af_P9WNC3_146_285_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9056 135 274 1.10.8.50
af_P9WNC3_146_285_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8996 135 274 1.10.8.50
4ojuC00 Alpha Beta;Alpha-Beta Horseshoe;Leucine-rich repeat, LRR (right-handed beta-alpha superhelix);Ribonuclease Inhibitor 0.8977 49 71 3.80.10.10
1l1tA01 Alpha Beta;Alpha-Beta Barrel;N-terminal domain of MutM-like DNA repair proteins;MutM-like, N-terminal 0.8954 2 119 3.20.190.10
af_P9WNC3_1_133_3.20.190.10 Alpha Beta;Alpha-Beta Barrel;N-terminal domain of MutM-like DNA repair proteins;MutM-like, N-terminal 0.8904 1 119 3.20.190.10
ID Description Score Start End GO Terms
AF-A0A6I2WBA2-F1-model_v4 DNA-formamidopyrimidine glycosylase 0.9298 1 196 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078
AF-A0A0F4JX45-F1-model_v4 Formamidopyrimidine-DNA glycosylase 0.9256 1 248 GO:0003684
GO:0003906
GO:0006284
GO:0008270
GO:0016829
GO:0034039
AF-A0A4Y3VV96-F1-model_v4 deleted 0.9248 49 259
AF-A0A6A0AUE4-F1-model_v4 Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18) 0.9246 1 277 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078
AF-A0A165EEA7-F1-model_v4 Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18) 0.9222 1 276 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078

Map