F362270

General Info

Members Datasets Scaffolds Average Seq Length
251 187 502 412

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100009881|Ga0068855_1000098816
Length 477
Sequence LICRPKKELHPVFGRQVLRRSVAGWALRQARTTGGCGLSTLSDVTVVGAGPFGLSVAAHLRGLGVYCRIIGSPMESWKSKMPKGMLLKSAGFASNLSDPEQAFTLRQFCVEHGSPYDHLDLPIPLETFSAYGLAFQKRFAPDVENEELVSLIPVPEGFDLRMKSGLLFRTRKVVIATGLTYFRHIPELLSHLPRDKLSHSADHHDLQRFQGQRVAVLGGGASAIDIAVLLNEALGKVQLISHKPAIIFSGRWGGSGRHPLLRPLAYPVSGIGPGWKHRLFADLPWLFRYFPEYYRLGIAEKFPSASGGEPMRDRAASVPLLLGCSLQEARVSKHGVQLQLVSMDGSTQIVEADHVVAATGYKADVHRFPFLSPAIFEQLRLIGKTPRLSVNFESSIPGLYFVGHVSTTTFGPLMRFVFGADFTSRRISRHLAGVRPRRRRESPRTGAGQHRPTADISSPGTPADAHLEAVKESQSSR

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
63 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
66 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
104 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
117 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
118 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
127 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
130 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
131 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
132 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
135 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
136 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
144 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
145 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
146 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
147 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
148 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
149 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
150 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
151 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
152 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
153 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
156 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
157 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
158 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
180 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300059646 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 42R_SW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
184 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
185 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
186 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
187 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.63
Metatranscriptomes 4.78
Isolates 1.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.99
Nodule 0.4
Rhizoplane 1.59
Rhizosphere 88.45
Stem 0
Stem Tuber 0
Unclassified 9.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100009881 3300005563 Bacteria 11507
2 MBSR1b_contig_183906 2162886012 Bacteria 1744
3 rootH1_10018510 3300003316 Bacteria 2166
4 rootH2_10061295 3300003320 Bacteria 4148
5 rootH2_10135678 3300003320 Bacteria 6045
6 Ga0058863_10126460 3300004799 Bacteria 5188
7 Ga0058861_10155479 3300004800 Bacteria 5866
8 Ga0058862_10194606 3300004803 Bacteria 6521
9 Ga0058862_12836285 3300004803 Unclassified 1612
10 Ga0065714_10106697 3300005288 Bacteria 1544
11 Ga0070658_10028819 3300005327 Bacteria 4458
12 Ga0070683_100003816 3300005329 Bacteria 12310
13 Ga0070683_100021924 3300005329 Bacteria 5703
14 Ga0070683_100179930 3300005329 Bacteria 2007
15 Ga0070680_100000058 3300005336 Bacteria 57257
16 Ga0068868_100010122 3300005338 Bacteria 6813
17 Ga0070660_100024198 3300005339 Bacteria 4504
18 Ga0070661_100082714 3300005344 Bacteria 2371
19 Ga0070661_100133121 3300005344 Bacteria 1869
20 Ga0070675_100057709 3300005354 Bacteria 3201
21 Ga0070673_100025796 3300005364 Bacteria 4331
22 Ga0070673_100206697 3300005364 Unclassified 1693
23 Ga0070659_100006926 3300005366 Bacteria 8209
24 Ga0070659_100119780 3300005366 Bacteria 2130
25 Ga0070708_100070259 3300005445 Unclassified 3149
26 Ga0070663_100111378 3300005455 Bacteria 2057
27 Ga0070662_100170232 3300005457 Unclassified 1710
28 Ga0070681_10020683 3300005458 Bacteria 6592
29 Ga0070681_10043938 3300005458 Bacteria 4472
30 Ga0070706_100007137 3300005467 Bacteria 10508
31 Ga0070707_100027875 3300005468 Bacteria 5373
32 Ga0070698_100030016 3300005471 Bacteria 5641
33 Ga0070698_100100553 3300005471 Bacteria 2864
34 Ga0070698_100293725 3300005471 Unclassified 1556
35 Ga0070699_100078701 3300005518 Bacteria 2871
36 Ga0070679_100025423 3300005530 Bacteria 5811
37 Ga0070684_100006833 3300005535 Bacteria 8852
38 Ga0070697_100022432 3300005536 Bacteria 5011
39 Ga0068853_100000745 3300005539 Bacteria 22603
40 Ga0068855_100019562 3300005563 Bacteria 8132
41 Ga0070664_100020611 3300005564 Bacteria 5429
42 Ga0070664_100057376 3300005564 Bacteria 3310
43 Ga0070664_100072529 3300005564 Bacteria 2953
44 Ga0068857_100030195 3300005577 Bacteria 4784
45 Ga0068857_100089281 3300005577 Bacteria 2758
46 Ga0068857_100151584 3300005577 Unclassified 2101
47 Ga0068852_100003159 3300005616 Bacteria 11493
48 Ga0068851_10000500 3300005834 Bacteria 17092
49 Ga0068863_100301538 3300005841 Archaea 1554
50 Ga0068863_100318391 3300005841 Bacteria 1511
51 Ga0068858_100188886 3300005842 Bacteria 1946
52 Ga0068860_100033701 3300005843 Bacteria 4913
53 Ga0081540_1031326 3300005983 Bacteria 2926
54 Ga0070717_10008683 3300006028 Bacteria 7602
55 Ga0075365_10070411 3300006038 Bacteria 2352
56 Ga0075369_10014640 3300006186 Bacteria 3137
57 Ga0099794_10015966 3300007265 Bacteria 3323
58 Ga0105251_10000487 3300009011 Bacteria 37553
59 Ga0105240_10015988 3300009093 Bacteria 10172
60 Ga0111539_10013141 3300009094 Bacteria 10356
61 Ga0114129_10076723 3300009147 Bacteria 4651
62 Ga0114129_10465515 3300009147 Bacteria 1656
63 Ga0105242_10015163 3300009176 Bacteria 5984
64 Ga0105237_10000586 3300009545 Bacteria 50806
65 Ga0105238_10000322 3300009551 Bacteria 52148
66 Ga0105239_10002049 3300010375 Bacteria 26140
67 Ga0105239_10219447 3300010375 Bacteria 2132
68 Ga0105246_10081417 3300011119 Unclassified 2308
69 Ga0157370_10009392 3300013104 Bacteria 10455
70 Ga0157369_10000530 3300013105 Bacteria 50404
71 Ga0157369_10224919 3300013105 Bacteria 1963
72 Ga0157378_10223330 3300013297 Unclassified 1792
73 Ga0163162_10003383 3300013306 Bacteria 15249
74 Ga0157372_10050385 3300013307 Unclassified 4632
75 Ga0157372_10263121 3300013307 Bacteria 2003
76 Ga0163163_10305103 3300014325 Bacteria 1644
77 Ga0157379_10325926 3300014968 Bacteria 1403
78 Ga0157376_10009369 3300014969 Bacteria 7111
79 Ga0206356_11314722 3300020070 Unclassified 1299
80 Ga0206351_10849266 3300020077 Bacteria 6243
81 Ga0206353_11173489 3300020082 Unclassified 1643
82 Ga0213872_10012613 3300021361 Unclassified 3973
83 Ga0213874_10001581 3300021377 Bacteria 4761
84 Ga0213874_10013929 3300021377 Unclassified 2093
85 Ga0213875_10000179 3300021388 Bacteria 64723
86 Ga0213871_10002943 3300021441 Bacteria 3213
87 Ga0207427_100381 3300025231 Bacteria 26800
88 Ga0207653_10000556 3300025885 Bacteria 13648
89 Ga0207705_10053498 3300025909 Bacteria 2908
90 Ga0207705_10074840 3300025909 Bacteria 2459
91 Ga0207684_10000063 3300025910 Bacteria 196933
92 Ga0207684_10043333 3300025910 Bacteria 3815
93 Ga0207684_10082124 3300025910 Bacteria 2744
94 Ga0207707_10000541 3300025912 Bacteria 38481
95 Ga0207707_10066455 3300025912 Bacteria 3140
96 Ga0207695_10007528 3300025913 Bacteria 13808
97 Ga0207671_10006264 3300025914 Bacteria 10645
98 Ga0207660_10002803 3300025917 Bacteria 11427
99 Ga0207660_10040662 3300025917 Unclassified 3256
100 Ga0207657_10013758 3300025919 Bacteria 7923
101 Ga0207657_10018536 3300025919 Bacteria 6639
102 Ga0207649_10018273 3300025920 Bacteria 3984
103 Ga0207649_10086275 3300025920 Bacteria 2045
104 Ga0207652_10001816 3300025921 Bacteria 18492
105 Ga0207646_10000326 3300025922 Bacteria 64563
106 Ga0207646_10144418 3300025922 Unclassified 2144
107 Ga0207681_10172157 3300025923 Unclassified 1642
108 Ga0207694_10016684 3300025924 Bacteria 5550
109 Ga0207659_10041950 3300025926 Bacteria 3206
110 Ga0207690_10250006 3300025932 Bacteria 1369
111 Ga0207706_10108248 3300025933 Unclassified 2446
112 Ga0207661_10024408 3300025944 Bacteria 4583
113 Ga0207661_10044628 3300025944 Bacteria 3504
114 Ga0207679_10053944 3300025945 Unclassified 2957
115 Ga0207667_10003984 3300025949 Bacteria 18151
116 Ga0207667_10006638 3300025949 Bacteria 13982
117 Ga0207651_10025418 3300025960 Bacteria 3680
118 Ga0207668_10107243 3300025972 Bacteria 2088
119 Ga0207658_10118854 3300025986 Bacteria 2103
120 Ga0207677_10018389 3300026023 Bacteria 4193
121 Ga0207702_10370204 3300026078 Unclassified 1375
122 Ga0207641_10285532 3300026088 Archaea 1554
123 Ga0207674_10005117 3300026116 Bacteria 15650
124 Ga0207674_10212791 3300026116 Bacteria 1882
125 Ga0207675_100027716 3300026118 Bacteria 5277
126 Ga0207698_10229953 3300026142 Unclassified 1683
127 Ga0209588_1000570 3300027671 Bacteria 9450
128 Ga0265337_1004795 3300028556 Bacteria 5538
129 Ga0265338_10029394 3300028800 Bacteria 5449
130 Ga0265760_10010314 3300031090 Bacteria 2667
131 Ga0265320_10000789 3300031240 Bacteria 24116
132 Ga0265325_10044274 3300031241 Bacteria 2318
133 Ga0265339_10000133 3300031249 Bacteria 60726
134 Ga0265331_10057871 3300031250 Bacteria 1837
135 Ga0307509_10149770 3300031507 Bacteria 2252
136 Ga0265313_10000491 3300031595 Bacteria 41687
137 Ga0265314_10042968 3300031711 Bacteria 3218
138 Ga0373934_0008075 3300035086 Bacteria 3919
139 Ga0373947_0011900 3300035725 Bacteria 4984
140 Ga0373925_0129243 3300037068 Bacteria 1968
141 Ga0395899_0000725 3300037312 Bacteria 32983
142 Ga0395899_0003121 3300037312 Bacteria 13200
143 Ga0395899_0071433 3300037312 Bacteria 2540
144 Ga0395899_0087452 3300037312 Unclassified 2262
145 Ga0395900_0002399 3300037418 Bacteria 20666
146 Ga0395900_0004004 3300037418 Bacteria 15730
147 Ga0395900_0006909 3300037418 Bacteria 11776
148 Ga0395900_0014333 3300037418 Bacteria 8093
149 Ga0395900_0014996 3300037418 Bacteria 7898
150 Ga0395900_0024526 3300037418 Bacteria 6176
151 Ga0395900_0086909 3300037418 Bacteria 3213
152 Ga0395900_0102469 3300037418 Bacteria 2940
153 Ga0395898_0004516 3300037466 Bacteria 15207
154 Ga0395898_0007013 3300037466 Bacteria 11975
155 Ga0395898_0045697 3300037466 Bacteria 4304
156 Ga0395898_0066003 3300037466 Bacteria 3507
157 Ga0395905_0003380 3300037471 Bacteria 17096
158 Ga0395905_0023157 3300037471 Bacteria 5871
159 Ga0395905_0035618 3300037471 Bacteria 4673
160 Ga0395905_0037600 3300037471 Bacteria 4544
161 Ga0395905_0043135 3300037471 Bacteria 4232
162 Ga0436364_0629324 3300037853 Bacteria 2276
163 Ga0436364_0668201 3300037853 Bacteria 105492
164 Ga0436364_1013362 3300037853 Bacteria 3685
165 Ga0436364_1171962 3300037853 Bacteria 33535
166 Ga0395901_0009652 3300038443 Bacteria 9789
167 Ga0395901_0024490 3300038443 Bacteria 6195
168 Ga0395901_0089640 3300038443 Bacteria 3218
169 Ga0395901_0325201 3300038443 Bacteria 1590
170 Ga0436360_0313251 3300039438 Bacteria 6369
171 Ga0436360_0466682 3300039438 Bacteria 2841
172 Ga0436361_0010391 3300039447 Bacteria 16052
173 Ga0436361_1162467 3300039447 Bacteria 6420
174 Ga0436363_0891181 3300039450 Bacteria 10913
175 Ga0436363_0903626 3300039450 Bacteria 1524
176 Ga0436362_1198327 3300039453 Bacteria 2422
177 Ga0466966_0011768 3300044684 Bacteria 5797
178 Ga0466961_0041782 3300044693 Bacteria 2940
179 Ga0466964_0014896 3300044706 Bacteria 2961
180 Ga0466964_0038363 3300044706 Bacteria 1926
181 Ga0466957_0006582 3300044842 Bacteria 6569
182 Ga0451576_0282698 3300045051 Bacteria 1735
183 Ga0466958_0033242 3300045836 Bacteria 3072
184 Ga0466967_0033993 3300045976 Bacteria 4322
185 Ga0495603_0032588 3300046455 Bacteria 3135
186 Ga0495629_0003884 3300046459 Bacteria 11260
187 Ga0495651_0034607 3300046462 Bacteria 3937
188 Ga0495653_0056422 3300046463 Bacteria 2994
189 Ga0495662_0006305 3300046476 Bacteria 5929
190 Ga0495607_0009804 3300046501 Bacteria 6466
191 Ga0495583_0014561 3300046506 Bacteria 4332
192 Ga0495606_0002911 3300046507 Bacteria 18917
193 Ga0495628_0051436 3300046516 Bacteria 3257
194 Ga0495666_0003886 3300046526 Bacteria 7555
195 Ga0495642_0000557 3300046528 Bacteria 18808
196 Ga0495652_0007695 3300046529 Bacteria 9922
197 Ga0495665_0000620 3300046531 Bacteria 18038
198 Ga0495640_0011960 3300046533 Bacteria 6654
199 Ga0495667_0019645 3300046559 Bacteria 4558
200 Ga0495634_0006761 3300046642 Bacteria 8686
201 Ga0495625_0014915 3300046660 Bacteria 6180
202 Ga0495635_0009286 3300046663 Bacteria 6870
203 Ga0495588_0000089 3300046674 Bacteria 191894
204 Ga0495646_0017143 3300046680 Bacteria 4597
205 Ga0495613_0011264 3300046689 Bacteria 6642
206 Ga0495624_0003670 3300046690 Bacteria 11352
207 Ga0495600_0000713 3300046809 Bacteria 17462
208 Ga0495581_0002266 3300047315 Bacteria 10827
209 Ga0495604_0005910 3300047317 Bacteria 9707
210 Ga0495636_0005820 3300047318 Bacteria 4833
211 Ga0495674_0061919 3300047319 Bacteria 3259
212 Ga0495672_0007909 3300047320 Bacteria 7930
213 Ga0495676_0003931 3300047321 Bacteria 13515
214 Ga0495676_0077210 3300047321 Bacteria 2540
215 Ga0495687_000431 3300047443 Bacteria 51764
216 Ga0495675_0003332 3300047444 Bacteria 9664
217 Ga0495593_0070483 3300047673 Bacteria 1817
218 Ga0495614_0002098 3300048089 Bacteria 8806
219 Ga0496102_0072456 3300048905 Bacteria 3166
220 Ga0496103_0025677 3300048906 Bacteria 3563
221 Ga0496107_0008747 3300048910 Bacteria 7014
222 Ga0496109_0068231 3300048912 Bacteria 3260
223 Ga0496117_0016473 3300048920 Bacteria 6239
224 Ga0496118_0000519 3300048921 Bacteria 63335
225 Ga0496126_0044121 3300048929 Bacteria 4108
226 Ga0496126_0160551 3300048929 Bacteria 1921
227 Ga0501032_0026993 3300049569 Bacteria 3948
228 Ga0501037_0131152 3300049573 Bacteria 1797
229 Ga0501039_0049928 3300049575 Bacteria 3236
230 Ga0501043_0008505 3300049579 Bacteria 8080
231 Ga0501043_0121339 3300049579 Bacteria 2050
232 Ga0501047_0061139 3300049581 Bacteria 3635
233 Ga0501047_0137455 3300049581 Bacteria 2323
234 Ga0501070_0090278 3300049586 Bacteria 2536
235 Ga0501073_0003013 3300049589 Bacteria 12622
236 Ga0501074_0139406 3300049590 Bacteria 1735
237 Ga0501080_0005904 3300049742 Bacteria 10965
238 Ga0501044_0015655 3300049823 Bacteria 8167
239 nmdc:mga0yw44_36984_c1 3300050492 Bacteria 2880
240 nmdc:mga0n895_122118_c1 3300050512 Bacteria 2626
241 nmdc:mga0a205_30783_c1 3300050515 Bacteria 5140
242 Ga0500595_012566 3300053119 Bacteria 3270
243 Ga0587085_003315 3300059506 Unclassified 1738
244 Ga0587078_001597 3300059646 Bacteria 2063
245 Ga0587111_0001350 3300060346 Unclassified 2910
246 Ga0587111_0001479 3300060346 Unclassified 2837
247 Ga0466962_0071763 3300061719 Unclassified 1654
248 2753269174 2751185782 Bacteria 11227053
249 2753569288 2751185846 Bacteria 7242164
250 2937842771 2937836603 Bacteria 6811263
251 2995464937 2995463766 Bacteria 8577691
252 Ga0068855_100009881
253 MBSR1b_contig_183906
254 rootH1_10018510
255 rootH2_10061295
256 rootH2_10135678
257 Ga0058863_10126460
258 Ga0058861_10155479
259 Ga0058862_10194606
260 Ga0058862_12836285
261 Ga0065714_10106697
262 Ga0070658_10028819
263 Ga0070683_100003816
264 Ga0070683_100021924
265 Ga0070683_100179930
266 Ga0070680_100000058
267 Ga0068868_100010122
268 Ga0070660_100024198
269 Ga0070661_100082714
270 Ga0070661_100133121
271 Ga0070675_100057709
272 Ga0070673_100025796
273 Ga0070673_100206697
274 Ga0070659_100006926
275 Ga0070659_100119780
276 Ga0070708_100070259
277 Ga0070663_100111378
278 Ga0070662_100170232
279 Ga0070681_10020683
280 Ga0070681_10043938
281 Ga0070706_100007137
282 Ga0070707_100027875
283 Ga0070698_100030016
284 Ga0070698_100100553
285 Ga0070698_100293725
286 Ga0070699_100078701
287 Ga0070679_100025423
288 Ga0070684_100006833
289 Ga0070697_100022432
290 Ga0068853_100000745
291 Ga0068855_100019562
292 Ga0070664_100020611
293 Ga0070664_100057376
294 Ga0070664_100072529
295 Ga0068857_100030195
296 Ga0068857_100089281
297 Ga0068857_100151584
298 Ga0068852_100003159
299 Ga0068851_10000500
300 Ga0068863_100301538
301 Ga0068863_100318391
302 Ga0068858_100188886
303 Ga0068860_100033701
304 Ga0081540_1031326
305 Ga0070717_10008683
306 Ga0075365_10070411
307 Ga0075369_10014640
308 Ga0099794_10015966
309 Ga0105251_10000487
310 Ga0105240_10015988
311 Ga0111539_10013141
312 Ga0114129_10076723
313 Ga0114129_10465515
314 Ga0105242_10015163
315 Ga0105237_10000586
316 Ga0105238_10000322
317 Ga0105239_10002049
318 Ga0105239_10219447
319 Ga0105246_10081417
320 Ga0157370_10009392
321 Ga0157369_10000530
322 Ga0157369_10224919
323 Ga0157378_10223330
324 Ga0163162_10003383
325 Ga0157372_10050385
326 Ga0157372_10263121
327 Ga0163163_10305103
328 Ga0157379_10325926
329 Ga0157376_10009369
330 Ga0206356_11314722
331 Ga0206351_10849266
332 Ga0206353_11173489
333 Ga0213872_10012613
334 Ga0213874_10001581
335 Ga0213874_10013929
336 Ga0213875_10000179
337 Ga0213871_10002943
338 Ga0207427_100381
339 Ga0207653_10000556
340 Ga0207705_10053498
341 Ga0207705_10074840
342 Ga0207684_10000063
343 Ga0207684_10043333
344 Ga0207684_10082124
345 Ga0207707_10000541
346 Ga0207707_10066455
347 Ga0207695_10007528
348 Ga0207671_10006264
349 Ga0207660_10002803
350 Ga0207660_10040662
351 Ga0207657_10013758
352 Ga0207657_10018536
353 Ga0207649_10018273
354 Ga0207649_10086275
355 Ga0207652_10001816
356 Ga0207646_10000326
357 Ga0207646_10144418
358 Ga0207681_10172157
359 Ga0207694_10016684
360 Ga0207659_10041950
361 Ga0207690_10250006
362 Ga0207706_10108248
363 Ga0207661_10024408
364 Ga0207661_10044628
365 Ga0207679_10053944
366 Ga0207667_10003984
367 Ga0207667_10006638
368 Ga0207651_10025418
369 Ga0207668_10107243
370 Ga0207658_10118854
371 Ga0207677_10018389
372 Ga0207702_10370204
373 Ga0207641_10285532
374 Ga0207674_10005117
375 Ga0207674_10212791
376 Ga0207675_100027716
377 Ga0207698_10229953
378 Ga0209588_1000570
379 Ga0265337_1004795
380 Ga0265338_10029394
381 Ga0265760_10010314
382 Ga0265320_10000789
383 Ga0265325_10044274
384 Ga0265339_10000133
385 Ga0265331_10057871
386 Ga0307509_10149770
387 Ga0265313_10000491
388 Ga0265314_10042968
389 Ga0373934_0008075
390 Ga0373947_0011900
391 Ga0373925_0129243
392 Ga0395899_0000725
393 Ga0395899_0003121
394 Ga0395899_0071433
395 Ga0395899_0087452
396 Ga0395900_0002399
397 Ga0395900_0004004
398 Ga0395900_0006909
399 Ga0395900_0014333
400 Ga0395900_0014996
401 Ga0395900_0024526
402 Ga0395900_0086909
403 Ga0395900_0102469
404 Ga0395898_0004516
405 Ga0395898_0007013
406 Ga0395898_0045697
407 Ga0395898_0066003
408 Ga0395905_0003380
409 Ga0395905_0023157
410 Ga0395905_0035618
411 Ga0395905_0037600
412 Ga0395905_0043135
413 Ga0436364_0629324
414 Ga0436364_0668201
415 Ga0436364_1013362
416 Ga0436364_1171962
417 Ga0395901_0009652
418 Ga0395901_0024490
419 Ga0395901_0089640
420 Ga0395901_0325201
421 Ga0436360_0313251
422 Ga0436360_0466682
423 Ga0436361_0010391
424 Ga0436361_1162467
425 Ga0436363_0891181
426 Ga0436363_0903626
427 Ga0436362_1198327
428 Ga0466966_0011768
429 Ga0466961_0041782
430 Ga0466964_0014896
431 Ga0466964_0038363
432 Ga0466957_0006582
433 Ga0451576_0282698
434 Ga0466958_0033242
435 Ga0466967_0033993
436 Ga0495603_0032588
437 Ga0495629_0003884
438 Ga0495651_0034607
439 Ga0495653_0056422
440 Ga0495662_0006305
441 Ga0495607_0009804
442 Ga0495583_0014561
443 Ga0495606_0002911
444 Ga0495628_0051436
445 Ga0495666_0003886
446 Ga0495642_0000557
447 Ga0495652_0007695
448 Ga0495665_0000620
449 Ga0495640_0011960
450 Ga0495667_0019645
451 Ga0495634_0006761
452 Ga0495625_0014915
453 Ga0495635_0009286
454 Ga0495588_0000089
455 Ga0495646_0017143
456 Ga0495613_0011264
457 Ga0495624_0003670
458 Ga0495600_0000713
459 Ga0495581_0002266
460 Ga0495604_0005910
461 Ga0495636_0005820
462 Ga0495674_0061919
463 Ga0495672_0007909
464 Ga0495676_0003931
465 Ga0495676_0077210
466 Ga0495687_000431
467 Ga0495675_0003332
468 Ga0495593_0070483
469 Ga0495614_0002098
470 Ga0496102_0072456
471 Ga0496103_0025677
472 Ga0496107_0008747
473 Ga0496109_0068231
474 Ga0496117_0016473
475 Ga0496118_0000519
476 Ga0496126_0044121
477 Ga0496126_0160551
478 Ga0501032_0026993
479 Ga0501037_0131152
480 Ga0501039_0049928
481 Ga0501043_0008505
482 Ga0501043_0121339
483 Ga0501047_0061139
484 Ga0501047_0137455
485 Ga0501070_0090278
486 Ga0501073_0003013
487 Ga0501074_0139406
488 Ga0501080_0005904
489 Ga0501044_0015655
490 nmdc:mga0yw44_36984_c1
491 nmdc:mga0n895_122118_c1
492 nmdc:mga0a205_30783_c1
493 Ga0500595_012566
494 Ga0587085_003315
495 Ga0587078_001597
496 Ga0587111_0001350
497 Ga0587111_0001479
498 Ga0466962_0071763
499 2753269174
500 2753569288
501 2937842771
502 2995464937

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

45

250

0.81

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

40

247

0.78

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

42

251

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dio-assembly1.cif.gz_A the crystal structure of transhydrogenase from sinorhizobium meliloti 0.9413 175 207
1f8g-assembly1.cif.gz_A the x-ray structure of nicotinamide nucleotide transhydrogenase from rhodospirillum rubrum complexed with nad+ 0.9279 176 207
2cdb-assembly1.cif.gz_A sulfolobus solfataricus glucose dehydrogenase 1 in complex with nadp and glucose 0.911 175 206
1wam-assembly1.cif.gz_A structure of udp-galactopyranose mutase from klebsiella pneumoniae with fadh- 0.9101 174 209
2cdb-assembly1.cif.gz_C sulfolobus solfataricus glucose dehydrogenase 1 in complex with nadp and glucose 0.9083 175 206
ID Description Score Start End Superfamily
af_P9WFZ3_1_135_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9612 176 207 3.40.50.720
af_P39400_150_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9572 173 207 3.40.50.720
2vhyB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9508 175 203 3.40.50.720
af_Q2FZH1_2_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.928 174 206 3.40.50.720
af_O61709_2_252_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9206 176 207 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A679JPS0-F1-model_v4 Ferredoxin--NADP reductase (EC 1.18.1.2) 0.9889 4 399 GO:0004324
AF-A0A0D6JJ58-F1-model_v4 FAD-dependent pyridine nucleotide-disulphide oxidoreductase 0.9888 3 404 GO:0016491
AF-A0A2N3WPF3-F1-model_v4 NAD(P)-binding domain-containing protein (NADPH-dependent L-lysine 6-monooxygenase-like protein) 0.9849 1 391 GO:0047091
GO:0050660
AF-A0A372ISJ3-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9829 4 397 GO:0004497
GO:0050660
AF-A0A073B0J6-F1-model_v4 Dimethylaniline monooxygenase 0.9828 4 401 GO:0004497
GO:0050660

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