F361924

General Info

Members Datasets Scaffolds Average Seq Length
250 192 213 593

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0008140|Ga0501034_0008140_4899_6812
Length 637
Sequence MAPENNTPVLQVSDLSVDFAVDNLWVPAVKKLNYSIKRGEVMALVGESGSGKSVSSMSVLDLLPANSRVSGSIKLNGRELRGLSPAQMRGIRGKDIAVIFQEPMTALNPVLTVGFQIVETVRIHYGISPHEARDRAIELLRLVELPDPIKAFNSYPHQLSGGQRQRAMIAQSISCDPGLLIADEPTTALDVTVQAEILDLIRNLSDKLDSAVLLITHDMGVVADLADHVAVMRRGEVVEAGPTLQIFREPKHPYTIALLDAVPHLGQGAGGEEIDVTVALAAAALAEDEAPTGLLRQIEVNERALQEAHEVARELDARERVLEFKNIVIEYPGHGRVKAFRAIDGVDLTVHKGEVMGLVGESGSGKTTLGRAAIGLLPVTSGELNVTGVNLSTWNRKRVRQVHKNAGIVFQDPASSLNPRMTIGQSIGEPLLLAKGLKGRALDKEVQALLDSVELPSSYKSRYPHELSGGQKQRVGIARAISLHPDLLIADEPTSALDVSVQATVLDLIKNLQAQFQFACLFVTHDLAVIDVLADRIAVMHLGRLAEVGTRDEILRNPQDPYTQRLIAAVPLPDPEVQRERRELRARILAAGSDEYNSEALHPDAVEYGQPQRYPAAEGYNGGGEDPESDEDQRPND

Samples

Sample ID Description Type Environment
1 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
2 2643221566 Microbacterium sp. Root166 Isolate Unclassified
3 2643221575 Microbacterium sp. Root61 Isolate Unclassified
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2643221616 Leifsonia sp. Root227 Isolate Unclassified
6 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
7 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
8 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
9 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
10 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
11 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
12 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
13 2808606394 Promicromonospora sp. C35 Isolate Unclassified
14 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
15 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
16 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
17 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
18 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
19 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
20 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
21 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
22 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
23 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
24 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
25 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
26 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
27 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
28 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
29 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
30 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
31 2928153084 Leifsonia sp. 563 Isolate Unclassified
32 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
33 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
34 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
35 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
36 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
37 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
38 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
39 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
40 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
41 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
42 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
43 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
44 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
45 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
46 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
47 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
48 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
49 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
50 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
51 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
52 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
53 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
56 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
57 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
58 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
59 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
60 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
82 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
83 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
116 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
117 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
118 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
119 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
120 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
121 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
124 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
125 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
128 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
136 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
139 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
140 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
141 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
157 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
163 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
175 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
176 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
177 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
182 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
183 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
186 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
187 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
188 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
189 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
190 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
191 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
192 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.4
Metatranscriptomes 0.8
Isolates 14.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14
Nodule 0
Rhizoplane 11.2
Rhizosphere 59.2
Stem 0
Stem Tuber 0.4
Unclassified 15.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000273 3300000549 Bacteria 9333
2 JGI24735J21928_10000532 3300002067 Bacteria 13458
3 JGI25164J39214_1001104 3300002772 Bacteria 7755
4 JGI25152J39213_1000157 3300002773 Bacteria 46235
5 JGI25165J46597_1000004 3300003214 Bacteria 667510
6 Ga0006562J51391_1092097 3300003578 Bacteria 3722
7 Ga0055539_1000005 3300003752 Bacteria 609598
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000752 3300003759 Bacteria 10935
10 Ga0055527_1000001 3300003760 Bacteria 850044
11 Ga0055529_1000019 3300003763 Bacteria 332786
12 Ga0070658_10000282 3300005327 Bacteria 44669
13 Ga0070658_10054845 3300005327 Bacteria 3236
14 Ga0070669_100067449 3300005353 Bacteria 2640
15 Ga0070675_100014187 3300005354 Bacteria 6280
16 Ga0070674_100009249 3300005356 Bacteria 5897
17 Ga0070659_100003625 3300005366 Bacteria 10995
18 Ga0070685_10006715 3300005466 Bacteria 5872
19 Ga0068853_100047326 3300005539 Bacteria 3690
20 Ga0068855_100008461 3300005563 Bacteria 12443
21 Ga0068856_100028329 3300005614 Bacteria 5469
22 Ga0068858_100000684 3300005842 Bacteria 35382
23 Ga0075365_10065117 3300006038 Bacteria 2442
24 Ga0075363_100037034 3300006048 Bacteria 2561
25 Ga0075432_10000643 3300006058 Bacteria 10682
26 Ga0075367_10006354 3300006178 Bacteria 5962
27 Ga0075369_10018122 3300006186 Bacteria 2864
28 Ga0105251_10005543 3300009011 Bacteria 8217
29 Ga0105247_10004158 3300009101 Bacteria 9285
30 Ga0105248_10000533 3300009177 Bacteria 43245
31 Ga0105237_10011896 3300009545 Bacteria 9203
32 Ga0157370_10003930 3300013104 Bacteria 17297
33 Ga0157369_10014199 3300013105 Bacteria 8998
34 Ga0157369_10067283 3300013105 Bacteria 3852
35 Ga0171462_1004 3300013250 Bacteria 678877
36 Ga0157374_10114175 3300013296 Bacteria 2600
37 Ga0163162_10101715 3300013306 Bacteria 2966
38 Ga0157375_10125717 3300013308 Bacteria 2679
39 Ga0157379_10019038 3300014968 Bacteria 6061
40 Ga0206353_10913288 3300020082 Bacteria 12135
41 Ga0209566_100105 3300025225 Bacteria 125766
42 Ga0209674_100001 3300025226 Bacteria 4013750
43 Ga0209672_100006 3300025228 Bacteria 1004497
44 Ga0209147_100764 3300025229 Bacteria 15756
45 Ga0209563_100001 3300025230 Bacteria 4013775
46 Ga0207427_100010 3300025231 Bacteria 648610
47 Ga0209437_100550 3300025233 Bacteria 25143
48 Ga0209677_100001 3300025253 Bacteria 4013787
49 Ga0209677_100734 3300025253 Bacteria 16675
50 Ga0209148_1000015 3300025254 Bacteria 850103
51 Ga0209129_1000047 3300025258 Bacteria 270566
52 Ga0209233_1000001 3300025261 Bacteria 2992747
53 Ga0209455_1000013 3300025272 Bacteria 850103
54 Ga0209455_1000958 3300025272 Bacteria 14705
55 Ga0209025_1000916 3300025294 Bacteria 45350
56 Ga0207697_10006209 3300025315 Bacteria 5435
57 Ga0207655_1002790 3300025728 Bacteria 13577
58 Ga0207655_1006644 3300025728 Bacteria 7624
59 Ga0207713_1019082 3300025735 Bacteria 3369
60 Ga0207682_10007582 3300025893 Bacteria 4322
61 Ga0207647_10020130 3300025904 Bacteria 4479
62 Ga0207645_10001290 3300025907 Bacteria 20585
63 Ga0207705_10000001 3300025909 Bacteria 2061880
64 Ga0207671_10014542 3300025914 Bacteria 6213
65 Ga0207657_10002482 3300025919 Bacteria 19943
66 Ga0207681_10007501 3300025923 Bacteria 6683
67 Ga0207687_10006428 3300025927 Bacteria 7763
68 Ga0207690_10108209 3300025932 Bacteria 1997
69 Ga0207709_10018536 3300025935 Bacteria 3899
70 Ga0207691_10001848 3300025940 Bacteria 20694
71 Ga0207711_10008402 3300025941 Bacteria 8635
72 Ga0207667_10000485 3300025949 Bacteria 52690
73 Ga0207667_10002288 3300025949 Bacteria 24073
74 Ga0207703_10000230 3300026035 Bacteria 64446
75 Ga0207678_10046162 3300026067 Bacteria 3767
76 Ga0207428_10001531 3300027907 Bacteria 24149
77 Ga0307408_100001886 3300031548 Bacteria 15271
78 Ga0307408_100021614 3300031548 Bacteria 4358
79 Ga0307413_10008184 3300031824 Bacteria 4917
80 Ga0307410_10000917 3300031852 Bacteria 12580
81 Ga0307410_10067083 3300031852 Bacteria 2474
82 Ga0307406_10010051 3300031901 Bacteria 5327
83 Ga0307406_10012572 3300031901 Bacteria 4826
84 Ga0307406_10044007 3300031901 Bacteria 2796
85 Ga0307412_10023096 3300031911 Bacteria 3822
86 Ga0307412_10085450 3300031911 Bacteria 2193
87 Ga0307409_100000901 3300031995 Bacteria 13763
88 Ga0307409_100016757 3300031995 Bacteria 4861
89 Ga0307416_100000637 3300032002 Bacteria 18094
90 Ga0307416_100004288 3300032002 Bacteria 8568
91 Ga0307416_100008873 3300032002 Bacteria 6528
92 Ga0307416_100027577 3300032002 Bacteria 4208
93 Ga0307416_100116204 3300032002 Bacteria 2371
94 Ga0307414_10059876 3300032004 Bacteria 2691
95 Ga0395899_0001249 3300037312 Bacteria 22092
96 Ga0395899_0005901 3300037312 Bacteria 9504
97 Ga0395899_0037631 3300037312 Bacteria 3627
98 Ga0395900_0001956 3300037418 Bacteria 23265
99 Ga0395900_0025289 3300037418 Bacteria 6079
100 Ga0395900_0161329 3300037418 Bacteria 2286
101 Ga0395898_0000015 3300037466 Bacteria 439819
102 Ga0439436_0000663 3300041404 Bacteria 9192
103 Ga0439466_0001303 3300041411 Bacteria 9717
104 Ga0451806_677264 3300041462 Bacteria 2809
105 Ga0439433_0000052 3300041999 Bacteria 14115
106 Ga0439449_0008031 3300042007 Bacteria 4008
107 Ga0439457_004090 3300042014 Bacteria 3860
108 Ga0450900_003158 3300042136 Bacteria 1810
109 Ga0466966_0027787 3300044684 Bacteria 3688
110 Ga0466966_0029908 3300044684 Bacteria 3541
111 Ga0466961_0047783 3300044693 Bacteria 2736
112 Ga0466971_0014680 3300044719 Bacteria 3448
113 Ga0466968_0005020 3300044735 Bacteria 4958
114 Ga0466970_0074401 3300044765 Bacteria 1828
115 Ga0466957_0017224 3300044842 Bacteria 4229
116 Ga0466960_0004353 3300044901 Bacteria 5528
117 Ga0466959_0010824 3300045049 Bacteria 6539
118 Ga0466959_0016562 3300045049 Bacteria 5388
119 Ga0466958_0011232 3300045836 Bacteria 5041
120 Ga0495650_0000835 3300046471 Bacteria 37135
121 Ga0495580_0026094 3300046472 Bacteria 4263
122 Ga0495630_0065716 3300046517 Bacteria 2726
123 Ga0495665_0002898 3300046531 Bacteria 9271
124 Ga0495586_0002949 3300046535 Bacteria 9177
125 Ga0495586_0010394 3300046535 Bacteria 4948
126 Ga0495587_0017711 3300046536 Bacteria 4423
127 Ga0495645_0001257 3300046543 Bacteria 17282
128 Ga0495588_0057901 3300046674 Bacteria 2002
129 Ga0495600_0006836 3300046809 Bacteria 6953
130 Ga0495581_0017186 3300047315 Bacteria 4204
131 Ga0495636_0021764 3300047318 Bacteria 2590
132 Ga0495672_0094801 3300047320 Bacteria 1631
133 Ga0496100_0001930 3300048903 Bacteria 10368
134 Ga0496100_0002413 3300048903 Bacteria 9468
135 Ga0496101_0002016 3300048904 Bacteria 12333
136 Ga0496101_0003868 3300048904 Bacteria 9357
137 Ga0496101_0019425 3300048904 Bacteria 4638
138 Ga0496101_0123777 3300048904 Bacteria 1957
139 Ga0496102_0013691 3300048905 Bacteria 7032
140 Ga0496103_0002611 3300048906 Bacteria 11289
141 Ga0496103_0004848 3300048906 Bacteria 8124
142 Ga0496105_0011548 3300048908 Bacteria 6982
143 Ga0496105_0124216 3300048908 Bacteria 2127
144 Ga0496106_0006466 3300048909 Bacteria 8678
145 Ga0496106_0083102 3300048909 Bacteria 2462
146 Ga0496107_0001892 3300048910 Bacteria 13264
147 Ga0496107_0009418 3300048910 Bacteria 6776
148 Ga0496108_0059592 3300048911 Bacteria 3210
149 Ga0496108_0063839 3300048911 Bacteria 3101
150 Ga0496109_0012344 3300048912 Bacteria 7375
151 Ga0496110_0018594 3300048913 Bacteria 5829
152 Ga0496110_0073389 3300048913 Bacteria 3036
153 Ga0496111_0024448 3300048914 Bacteria 4253
154 Ga0496111_0081300 3300048914 Bacteria 2365
155 Ga0496112_0123657 3300048915 Bacteria 2558
156 Ga0496113_0003811 3300048916 Bacteria 9124
157 Ga0496114_0002924 3300048917 Bacteria 13089
158 Ga0496115_0016092 3300048918 Bacteria 5688
159 Ga0496115_0029057 3300048918 Bacteria 4339
160 Ga0496117_0019434 3300048920 Bacteria 5578
161 Ga0496118_0017845 3300048921 Bacteria 6438
162 Ga0496118_0046699 3300048921 Bacteria 3365
163 Ga0496119_0006145 3300048922 Bacteria 11241
164 Ga0496119_0023777 3300048922 Bacteria 4333
165 Ga0496119_0025689 3300048922 Bacteria 4106
166 Ga0496120_0036603 3300048923 Bacteria 2919
167 Ga0496122_0000036 3300048925 Bacteria 312598
168 Ga0496122_0000832 3300048925 Bacteria 58580
169 Ga0496122_0002317 3300048925 Bacteria 27486
170 Ga0496123_0000011 3300048926 Bacteria 493925
171 Ga0496123_0005620 3300048926 Bacteria 12528
172 Ga0496123_0007398 3300048926 Bacteria 10364
173 Ga0496124_0000370 3300048927 Bacteria 82276
174 Ga0496125_0000077 3300048928 Bacteria 232629
175 Ga0496125_0021032 3300048928 Bacteria 6099
176 Ga0496126_0016135 3300048929 Bacteria 7483
177 Ga0496126_0016660 3300048929 Bacteria 7344
178 Ga0501033_0046915 3300049570 Bacteria 3212
179 Ga0501034_0008140 3300049571 Bacteria 11117
180 Ga0501034_0017950 3300049571 Bacteria 7257
181 Ga0501034_0032957 3300049571 Bacteria 5260
182 Ga0501037_0082375 3300049573 Bacteria 2331
183 Ga0501038_0016184 3300049574 Bacteria 6765
184 Ga0501038_0102419 3300049574 Bacteria 2382
185 Ga0501042_0016566 3300049578 Bacteria 5062
186 Ga0501042_0089024 3300049578 Bacteria 2215
187 Ga0501046_0004173 3300049580 Bacteria 13159
188 Ga0501047_0001931 3300049581 Bacteria 19929
189 Ga0501047_0028771 3300049581 Bacteria 5359
190 Ga0501047_0040819 3300049581 Bacteria 4486
191 Ga0501047_0073619 3300049581 Bacteria 3289
192 Ga0501069_0029308 3300049585 Bacteria 3020
193 Ga0501070_0010818 3300049586 Bacteria 7708
194 Ga0501070_0011722 3300049586 Bacteria 7404
195 Ga0501070_0046045 3300049586 Bacteria 3627
196 Ga0501071_0017324 3300049587 Bacteria 4966
197 Ga0501073_0029887 3300049589 Bacteria 3891
198 Ga0501080_0094632 3300049742 Bacteria 2774
199 Ga0501035_0038786 3300049822 Bacteria 4312
200 Ga0501035_0055668 3300049822 Bacteria 3531
201 Ga0501035_0141881 3300049822 Bacteria 2088
202 Ga0501044_0012275 3300049823 Bacteria 9274
203 Ga0501044_0031455 3300049823 Bacteria 5586
204 Ga0501044_0043588 3300049823 Bacteria 4660
205 nmdc:mga0yw44_1912_c1 3300050492 Bacteria 8599
206 nmdc:mga0sz30_6591_c2 3300050516 Bacteria 3404
207 Ga0500635_0000039 3300053080 Bacteria 93004
208 Ga0500651_0027081 3300053093 Bacteria 3604
209 Ga0500573_0010023 3300053140 Bacteria 5280
210 Ga0500573_0035641 3300053140 Bacteria 2871
211 Ga0500590_050993 3300053148 Bacteria 2103
212 Ga0500620_000447 3300053155 Bacteria 7456
213 Ga0466962_0022549 3300061719 Bacteria 3025

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0141881 Ga0501035_0141881_28_1764 486
2 3300048904 Ga0496101_0123777 Ga0496101_0123777_264_1886 506
3 3300048918 Ga0496115_0029057 Ga0496115_0029057_2651_4315 507
4 3300047320 Ga0495672_0094801 Ga0495672_0094801_31_1620 509
5 3300042136 Ga0450900_003158 Ga0450900_003158_19_1731 516
6 3300049574 Ga0501038_0016184 Ga0501038_0016184_189_2078 520
7 3300049571 Ga0501034_0017950 Ga0501034_0017950_149_2038 522
8 3300044765 Ga0466970_0074401 Ga0466970_0074401_14_1732 523
9 3300046471 Ga0495650_0000835 Ga0495650_0000835_15972_17639 524
10 iso_pu_bacteria 8046352972 8046353348 530
11 iso_pu_bacteria 2870628048 2870630735 531
12 3300005327 Ga0070658_10054845 Ga0070658_100548451 532
13 3300005366 Ga0070659_100003625 Ga0070659_1000036253 532
14 3300005466 Ga0070685_10006715 Ga0070685_100067155 532
15 3300005539 Ga0068853_100047326 Ga0068853_1000473263 532
16 3300005563 Ga0068855_100008461 Ga0068855_10000846110 532
17 3300005614 Ga0068856_100028329 Ga0068856_1000283292 532
18 3300005842 Ga0068858_100000684 Ga0068858_10000068436 532
19 3300009101 Ga0105247_10004158 Ga0105247_100041585 532
20 3300009177 Ga0105248_10000533 Ga0105248_1000053327 532
21 3300009545 Ga0105237_10011896 Ga0105237_100118963 532
22 3300013296 Ga0157374_10114175 Ga0157374_101141752 532
23 3300014968 Ga0157379_10019038 Ga0157379_100190383 532
24 3300025914 Ga0207671_10014542 Ga0207671_100145424 532
25 3300025919 Ga0207657_10002482 Ga0207657_1000248214 532
26 3300025927 Ga0207687_10006428 Ga0207687_100064284 532
27 3300025941 Ga0207711_10008402 Ga0207711_100084025 532
28 3300025949 Ga0207667_10000485 Ga0207667_1000048510 532
29 3300025949 Ga0207667_10002288 Ga0207667_100022882 532
30 3300026035 Ga0207703_10000230 Ga0207703_100002305 532
31 3300053093 Ga0500651_0027081 Ga0500651_0027081_426_2087 532
32 3300053148 Ga0500590_050993 Ga0500590_050993_237_1898 532
33 3300053155 Ga0500620_000447 Ga0500620_000447_2213_3877 532
34 iso_pu_bacteria 2852677369 2852678954 534
35 iso_pu_bacteria 2643221635 2644198685 535
36 3300048925 Ga0496122_0002317 Ga0496122_0002317_2906_4579 537
37 3300048926 Ga0496123_0007398 Ga0496123_0007398_3541_5214 537
38 iso_pu_bacteria 2808606306 2808630808 538
39 iso_pu_bacteria 2643221597 2643995496 539
40 iso_pu_bacteria 2833709550 2833711368 540
41 iso_pu_bacteria 2808606394 2809027200 541
42 iso_pu_bacteria 2857733635 2857736570 541
43 iso_pu_bacteria 2964326757 2964328968 541
44 3300003578 Ga0006562J51391_1092097 Ga0006562J51391_10920972 542
45 3300048922 Ga0496119_0006145 Ga0496119_0006145_9432_11216 542
46 3300048925 Ga0496122_0000036 Ga0496122_0000036_94450_96234 542
47 3300048926 Ga0496123_0000011 Ga0496123_0000011_94526_96310 542
48 3300048928 Ga0496125_0021032 Ga0496125_0021032_3421_5205 542
49 3300049585 Ga0501069_0029308 Ga0501069_0029308_344_2080 544
50 3300049586 Ga0501070_0046045 Ga0501070_0046045_375_2111 544
51 3300049587 Ga0501071_0017324 Ga0501071_0017324_1877_3613 544
52 3300046674 Ga0495588_0057901 Ga0495588_0057901_240_1982 546
53 iso_pu_bacteria 2932431166 2932433840 547
54 3300048911 Ga0496108_0059592 Ga0496108_0059592_1232_2983 548
55 3300048914 Ga0496111_0081300 Ga0496111_0081300_135_1886 548
56 3300048918 Ga0496115_0016092 Ga0496115_0016092_746_2497 548
57 3300053140 Ga0500573_0010023 Ga0500573_0010023_3168_4883 548
58 3300053140 Ga0500573_0035641 Ga0500573_0035641_560_2275 548
59 iso_pu_bacteria 2758568522 2760303680 549
60 iso_pu_bacteria 2811994880 2812362292 550
61 3300025728 Ga0207655_1002790 Ga0207655_10027907 551
62 3300025935 Ga0207709_10018536 Ga0207709_100185363 551
63 3300031901 Ga0307406_10010051 Ga0307406_100100514 552
64 3300032002 Ga0307416_100027577 Ga0307416_1000275774 552
65 3300037312 Ga0395899_0005901 Ga0395899_0005901_5536_7341 552
66 3300048903 Ga0496100_0002413 Ga0496100_0002413_6151_7929 552
67 3300048904 Ga0496101_0019425 Ga0496101_0019425_982_2760 552
68 3300048905 Ga0496102_0013691 Ga0496102_0013691_1267_3045 552
69 3300048906 Ga0496103_0002611 Ga0496103_0002611_1485_3263 552
70 3300048910 Ga0496107_0009418 Ga0496107_0009418_1492_3270 552
71 3300048912 Ga0496109_0012344 Ga0496109_0012344_2627_4405 552
72 3300048913 Ga0496110_0018594 Ga0496110_0018594_1590_3368 552
73 3300048916 Ga0496113_0003811 Ga0496113_0003811_2494_4272 552
74 3300048917 Ga0496114_0002924 Ga0496114_0002924_6651_8429 552
75 3300048923 Ga0496120_0036603 Ga0496120_0036603_247_2025 552
76 3300005327 Ga0070658_10000282 Ga0070658_100002824 553
77 3300025904 Ga0207647_10020130 Ga0207647_100201302 553
78 3300025909 Ga0207705_10000001 Ga0207705_10000001129 553
79 3300026067 Ga0207678_10046162 Ga0207678_100461622 553
80 iso_pu_bacteria 2739367654 2739608858 553
81 iso_pu_bacteria 2808606447 2809227767 558
82 iso_pu_bacteria 2852632344 2852634522 558
83 iso_pu_bacteria 2884994152 2884994420 559
84 3300048925 Ga0496122_0000832 Ga0496122_0000832_12550_14337 560
85 3300048926 Ga0496123_0005620 Ga0496123_0005620_7470_9257 560
86 3300044735 Ga0466968_0005020 Ga0466968_0005020_2192_3952 562
87 3300049578 Ga0501042_0089024 Ga0501042_0089024_187_1977 562
88 3300031995 Ga0307409_100016757 Ga0307409_1000167573 563
89 3300032002 Ga0307416_100004288 Ga0307416_1000042886 563
90 iso_pu_bacteria 2643221575 2643885923 563
91 iso_pu_bacteria 2643221694 2644527429 563
92 iso_pu_bacteria 2643221722 2644667503 563
93 iso_pu_bacteria 2643221616 2644096951 564
94 iso_pu_bacteria 2773857763 2774399028 564
95 iso_pu_bacteria 2844841374 2844842874 564
96 iso_pu_bacteria 2884763398 2884765853 564
97 iso_pu_bacteria 2919055335 2919058847 564
98 iso_pu_bacteria 2919523602 2919524957 564
99 iso_pu_bacteria 2928153084 2928156845 564
100 iso_pu_bacteria 8004212874 8004213751 564
101 3300037312 Ga0395899_0037631 Ga0395899_0037631_1683_3548 565
102 3300037418 Ga0395900_0025289 Ga0395900_0025289_1121_2983 565
103 3300037418 Ga0395900_0161329 Ga0395900_0161329_69_1934 565
104 3300048921 Ga0496118_0017845 Ga0496118_0017845_4505_6406 565
105 3300048927 Ga0496124_0000370 Ga0496124_0000370_49283_51184 565
106 3300048928 Ga0496125_0000077 Ga0496125_0000077_220154_221905 565
107 iso_pu_bacteria 2821268502 2821270400 565
108 iso_pu_bacteria 8045830549 8045831445 565
109 3300048929 Ga0496126_0016660 Ga0496126_0016660_3387_5207 566
110 3300049570 Ga0501033_0046915 Ga0501033_0046915_104_2017 566
111 3300049571 Ga0501034_0008140 Ga0501034_0008140_4899_6812 566
112 3300049573 Ga0501037_0082375 Ga0501037_0082375_42_1955 566
113 3300049574 Ga0501038_0102419 Ga0501038_0102419_428_2341 566
114 3300049578 Ga0501042_0016566 Ga0501042_0016566_1518_3431 566
115 3300049580 Ga0501046_0004173 Ga0501046_0004173_7806_9719 566
116 3300049581 Ga0501047_0001931 Ga0501047_0001931_11205_13118 566
117 3300049581 Ga0501047_0040819 Ga0501047_0040819_2198_4111 566
118 3300049581 Ga0501047_0073619 Ga0501047_0073619_1067_2980 566
119 3300049589 Ga0501073_0029887 Ga0501073_0029887_119_2032 566
120 3300049742 Ga0501080_0094632 Ga0501080_0094632_554_2467 566
121 3300049822 Ga0501035_0038786 Ga0501035_0038786_364_2277 566
122 3300049823 Ga0501044_0031455 Ga0501044_0031455_1242_3155 566
123 iso_pu_bacteria 2643221566 2643849294 566
124 3300003752 Ga0055539_1000005 Ga0055539_1000005140 567
125 3300003756 Ga0055533_1000001 Ga0055533_10000011209 567
126 3300003759 Ga0055525_1000752 Ga0055525_10007529 567
127 3300025225 Ga0209566_100105 Ga0209566_100105100 567
128 3300025226 Ga0209674_100001 Ga0209674_1000011209 567
129 3300025230 Ga0209563_100001 Ga0209563_1000011209 567
130 3300025253 Ga0209677_100001 Ga0209677_1000011209 567
131 3300044684 Ga0466966_0029908 Ga0466966_0029908_336_2198 567
132 3300044693 Ga0466961_0047783 Ga0466961_0047783_181_2043 567
133 3300045049 Ga0466959_0010824 Ga0466959_0010824_685_2547 567
134 3300002067 JGI24735J21928_10000532 JGI24735J21928_100005329 568
135 3300002772 JGI25164J39214_1001104 JGI25164J39214_10011042 568
136 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004289 568
137 3300003760 Ga0055527_1000001 Ga0055527_1000001690 568
138 3300003763 Ga0055529_1000019 Ga0055529_1000019196 568
139 3300013104 Ga0157370_10003930 Ga0157370_100039306 568
140 3300013105 Ga0157369_10067283 Ga0157369_100672833 568
141 3300020082 Ga0206353_10913288 Ga0206353_109132883 568
142 3300025228 Ga0209672_100006 Ga0209672_100006285 568
143 3300025229 Ga0209147_100764 Ga0209147_10076412 568
144 3300025231 Ga0207427_100010 Ga0207427_100010292 568
145 3300025233 Ga0209437_100550 Ga0209437_1005508 568
146 3300025253 Ga0209677_100734 Ga0209677_1007346 568
147 3300025254 Ga0209148_1000015 Ga0209148_1000015129 568
148 3300025261 Ga0209233_1000001 Ga0209233_10000011657 568
149 3300025272 Ga0209455_1000013 Ga0209455_1000013129 568
150 3300025272 Ga0209455_1000958 Ga0209455_10009586 568
151 3300025932 Ga0207690_10108209 Ga0207690_101082092 568
152 3300031901 Ga0307406_10044007 Ga0307406_100440072 568
153 3300037312 Ga0395899_0001249 Ga0395899_0001249_8015_9874 568
154 3300037418 Ga0395900_0001956 Ga0395900_0001956_13726_15582 568
155 3300037466 Ga0395898_0000015 Ga0395898_0000015_254818_256674 568
156 3300041462 Ga0451806_677264 Ga0451806_677264_450_2216 568
157 3300044684 Ga0466966_0027787 Ga0466966_0027787_648_2513 568
158 3300044719 Ga0466971_0014680 Ga0466971_0014680_948_2813 568
159 3300044842 Ga0466957_0017224 Ga0466957_0017224_1455_3320 568
160 3300044901 Ga0466960_0004353 Ga0466960_0004353_1683_3548 568
161 3300045049 Ga0466959_0016562 Ga0466959_0016562_1993_3858 568
162 3300045836 Ga0466958_0011232 Ga0466958_0011232_2023_3888 568
163 3300048904 Ga0496101_0003868 Ga0496101_0003868_1546_3402 568
164 3300048908 Ga0496105_0011548 Ga0496105_0011548_1347_3203 568
165 3300048920 Ga0496117_0019434 Ga0496117_0019434_527_2389 568
166 3300048921 Ga0496118_0046699 Ga0496118_0046699_185_2041 568
167 3300048922 Ga0496119_0025689 Ga0496119_0025689_1178_3034 568
168 3300048929 Ga0496126_0016135 Ga0496126_0016135_1168_3024 568
169 3300049571 Ga0501034_0032957 Ga0501034_0032957_2830_4740 568
170 3300049581 Ga0501047_0028771 Ga0501047_0028771_400_2310 568
171 3300049586 Ga0501070_0011722 Ga0501070_0011722_2997_4853 568
172 3300049822 Ga0501035_0055668 Ga0501035_0055668_200_2056 568
173 3300049823 Ga0501044_0012275 Ga0501044_0012275_3520_5430 568
174 3300053080 Ga0500635_0000039 Ga0500635_0000039_23677_25533 568
175 3300061719 Ga0466962_0022549 Ga0466962_0022549_402_2267 568
176 3300006038 Ga0075365_10065117 Ga0075365_100651172 570
177 3300006048 Ga0075363_100037034 Ga0075363_1000370342 570
178 3300006178 Ga0075367_10006354 Ga0075367_100063543 570
179 3300006186 Ga0075369_10018122 Ga0075369_100181223 570
180 3300013250 Ga0171462_1004 Ga0171462_100411 570
181 3300031901 Ga0307406_10012572 Ga0307406_100125723 570
182 3300048922 Ga0496119_0023777 Ga0496119_0023777_1631_3454 570
183 3300049586 Ga0501070_0010818 Ga0501070_0010818_3880_5685 570
184 3300049823 Ga0501044_0043588 Ga0501044_0043588_2150_3970 570
185 3300050492 nmdc:mga0yw44_1912_c1 nmdc:mga0yw44_1912_c1_430_2232 570
186 3300050516 nmdc:mga0sz30_6591_c2 nmdc:mga0sz30_6591_c2_794_2596 570
187 3300031548 Ga0307408_100021614 Ga0307408_1000216141 571
188 3300031911 Ga0307412_10085450 Ga0307412_100854502 571
189 3300032002 Ga0307416_100116204 Ga0307416_1001162042 571
190 iso_pu_bacteria 2808606700 2810364298 572
191 iso_pu_bacteria 2905926851 2905927831 572
192 3300005353 Ga0070669_100067449 Ga0070669_1000674491 574
193 3300005354 Ga0070675_100014187 Ga0070675_1000141871 574
194 3300005356 Ga0070674_100009249 Ga0070674_1000092494 574
195 3300009011 Ga0105251_10005543 Ga0105251_100055435 574
196 3300013105 Ga0157369_10014199 Ga0157369_100141996 574
197 3300013306 Ga0163162_10101715 Ga0163162_101017152 574
198 3300025315 Ga0207697_10006209 Ga0207697_100062094 574
199 3300025728 Ga0207655_1006644 Ga0207655_10066445 574
200 3300025735 Ga0207713_1019082 Ga0207713_10190821 574
201 3300025893 Ga0207682_10007582 Ga0207682_100075821 574
202 3300025907 Ga0207645_10001290 Ga0207645_1000129010 574
203 3300025923 Ga0207681_10007501 Ga0207681_100075013 574
204 3300025940 Ga0207691_10001848 Ga0207691_1000184817 574
205 3300046472 Ga0495580_0026094 Ga0495580_0026094_1368_3194 574
206 3300046517 Ga0495630_0065716 Ga0495630_0065716_246_2072 574
207 3300046531 Ga0495665_0002898 Ga0495665_0002898_1774_3600 574
208 3300046535 Ga0495586_0002949 Ga0495586_0002949_1414_3240 574
209 3300046535 Ga0495586_0010394 Ga0495586_0010394_1031_2857 574
210 3300046536 Ga0495587_0017711 Ga0495587_0017711_1275_3101 574
211 3300046543 Ga0495645_0001257 Ga0495645_0001257_14488_16314 574
212 3300046809 Ga0495600_0006836 Ga0495600_0006836_2908_4734 574
213 3300047315 Ga0495581_0017186 Ga0495581_0017186_1999_3825 574
214 3300047318 Ga0495636_0021764 Ga0495636_0021764_315_2141 574
215 3300048903 Ga0496100_0001930 Ga0496100_0001930_1760_3586 574
216 3300048904 Ga0496101_0002016 Ga0496101_0002016_6427_8253 574
217 3300048906 Ga0496103_0004848 Ga0496103_0004848_1477_3303 574
218 3300048908 Ga0496105_0124216 Ga0496105_0124216_163_1989 574
219 3300048909 Ga0496106_0006466 Ga0496106_0006466_1418_3244 574
220 3300048909 Ga0496106_0083102 Ga0496106_0083102_264_2090 574
221 3300048910 Ga0496107_0001892 Ga0496107_0001892_7358_9184 574
222 3300048911 Ga0496108_0063839 Ga0496108_0063839_1013_2839 574
223 3300002773 JGI25152J39213_1000157 JGI25152J39213_100015730 575
224 3300006058 Ga0075432_10000643 Ga0075432_100006435 575
225 3300025258 Ga0209129_1000047 Ga0209129_100004713 575
226 3300025294 Ga0209025_1000916 Ga0209025_100091613 575
227 3300031548 Ga0307408_100001886 Ga0307408_1000018866 575
228 3300031824 Ga0307413_10008184 Ga0307413_100081843 575
229 3300031852 Ga0307410_10000917 Ga0307410_100009175 575
230 3300031852 Ga0307410_10067083 Ga0307410_100670831 575
231 3300031911 Ga0307412_10023096 Ga0307412_100230962 575
232 3300031995 Ga0307409_100000901 Ga0307409_1000009016 575
233 3300032002 Ga0307416_100000637 Ga0307416_10000063713 575
234 3300032004 Ga0307414_10059876 Ga0307414_100598762 575
235 3300032002 Ga0307416_100008873 Ga0307416_1000088734 576
236 iso_pu_bacteria 2537561592 2537898296 577
237 iso_pu_bacteria 8054107350 8054108385 577
238 iso_pu_bacteria 2844849076 2844849647 578
239 3300041404 Ga0439436_0000663 Ga0439436_0000663_6249_8084 579
240 3300041411 Ga0439466_0001303 Ga0439466_0001303_5669_7504 579
241 3300041999 Ga0439433_0000052 Ga0439433_0000052_12243_14078 579
242 3300042007 Ga0439449_0008031 Ga0439449_0008031_1031_2866 579
243 3300042014 Ga0439457_004090 Ga0439457_004090_2002_3837 579
244 iso_pu_bacteria 2919051321 2919054513 580
245 3300027907 Ga0207428_10001531 Ga0207428_1000153119 582
246 3300048915 Ga0496112_0123657 Ga0496112_0123657_464_2311 582
247 3300048913 Ga0496110_0073389 Ga0496110_0073389_875_2701 583
248 3300048914 Ga0496111_0024448 Ga0496111_0024448_2097_3923 583
249 3300013308 Ga0157375_10125717 Ga0157375_101257171 584
250 3300000549 LJQas_1000273 LJQas_10002732 585

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

343

495

0.96

PF00005

ABC_tran

ABC transporter

29

187

0.94

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

238

286

0.87

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

546

593

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9687 330 557
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9514 339 560
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9509 327 544
7cha-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with amppnp 0.9505 330 557
4yms-assembly1.cif.gz_A crystal structure of an amino acid abc transporter 0.9471 330 560
ID Description Score Start End Superfamily
af_P75796_10_305_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9824 19 279 3.40.50.300
af_P75796_311_605_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9797 330 562 3.40.50.300
af_Q2FZR0_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9765 330 561 3.40.50.300
af_P0AAG0_1_323_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9745 20 279 3.40.50.300
af_Q2G1F8_1_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9688 20 286 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2S9BS46-F1-model_v4 Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein 0.9859 33 273 GO:0005524
GO:0005886
GO:0016887
AF-A0A487A363-F1-model_v4 deleted 0.9811 21 270
AF-A0A4R2GX88-F1-model_v4 Peptide/nickel transport system ATP-binding protein 0.9773 20 282 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A3D3H298-F1-model_v4 Glutathione ABC transporter ATP-binding protein 0.9765 23 116 GO:0005524
GO:0016887
AF-A0A8A7TJ59-F1-model_v4 deleted 0.976 330 557

Feature Viewer

pLDDT pTM Quality
84.52 0.79 High
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Predicted Structure (AlphaFold2)

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