F361716

General Info

Members Datasets Scaffolds Average Seq Length
250 202 204 243

Family's Representative Sequence

Representative Sequence 3300035172|Ga0373955_0107133|Ga0373955_0107133_40_891
Length 283
Sequence LAFCSGYQTPGSPDQEVKVDGDPVLLPVMWCGYRWRMSELVYPPVIATVKTLFRALDMRVRVDGAEHIPTTGGAVIACNHIGYLDFIFCGLGARPANRLVRFMAKKEVFDHRISGPLMRGMHHIPVDRDAGLSSYREALAALKNGQIVGVFPEATISRSFTIKEMKNGAARMAASAGVPLIPVAVWGTQRLWTKGRPRNLMQRHIPVSIRSGEPMYPGRRDNHDANTSTLRDRMTELLEQVQRDYPDKPNGPQDSWWIPAHLGGTAPTALEAAALDSQPGDAV

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
3 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
4 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
5 2582580736 Prauserella sp. Am3 Isolate Unclassified
6 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
7 2619618881 Frankia sp. ACN1ag Isolate Unclassified
8 2619619003 Frankia sp. CpI1-P Isolate Nodule
9 2626541554 Frankia sp. AvcI.1 Isolate Nodule
10 2643221679 Angustibacter sp. Root456 Isolate Unclassified
11 2671180195 Frankia sp. CcI49 Isolate Nodule
12 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
13 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
14 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
15 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
16 2773857922 Frankia sp. CcI49 Isolate Nodule
17 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
18 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
19 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
20 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
21 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
22 2858882152 Micromonospora noduli MED15 Isolate Nodule
23 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
24 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
25 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
26 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
27 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
28 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
29 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
30 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
31 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
32 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
33 2902582711 Micromonospora sp. AP08 Isolate Unclassified
34 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
35 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
36 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
37 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
38 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
40 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
41 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
42 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
43 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
44 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
45 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
46 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
47 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
48 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
49 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
50 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
51 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
52 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
53 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
54 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
55 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
56 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
57 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
58 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
59 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
60 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
61 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
62 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
63 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
64 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
65 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
66 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
67 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
68 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
69 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
70 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
71 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
72 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
73 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
74 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
75 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
77 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
78 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
82 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
83 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
84 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
87 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
88 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
89 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
118 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
119 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
120 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
121 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
122 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
123 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
129 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
130 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
131 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
132 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
135 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
136 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
137 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
138 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
139 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
140 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
144 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
145 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
146 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
147 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
148 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
149 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
150 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
151 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
152 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
153 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
154 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
155 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
159 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
160 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
166 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
167 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
168 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
169 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
170 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
185 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
186 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
187 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
188 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
189 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
190 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
191 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
192 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
193 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
194 637000116 Frankia casuarinae CcI3 Isolate Nodule
195 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
196 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
197 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
198 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
199 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
200 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
201 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
202 8054920844 Frankia tisae Agncl-8 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 81.6
Metatranscriptomes 0
Isolates 18.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.6
Nodule 4.8
Rhizoplane 4
Rhizosphere 71.6
Stem 0
Stem Tuber 0
Unclassified 16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002556 3300003203 Bacteria 8604
2 Ga0070658_10075794 3300005327 Bacteria 2759
3 Ga0070683_100380881 3300005329 Bacteria 1344
4 Ga0070670_100031461 3300005331 Bacteria 4570
5 Ga0068869_100028650 3300005334 Bacteria 3895
6 Ga0068869_100275731 3300005334 Bacteria 1351
7 Ga0070680_100582195 3300005336 Bacteria 960
8 Ga0068868_100010468 3300005338 Bacteria 6718
9 Ga0070660_100237415 3300005339 Bacteria 1484
10 Ga0070660_100501474 3300005339 Bacteria 1010
11 Ga0070661_100366460 3300005344 Bacteria 1133
12 Ga0070692_10045237 3300005345 Bacteria 2269
13 Ga0070668_100003312 3300005347 Bacteria 11882
14 Ga0070675_100000806 3300005354 Bacteria 22064
15 Ga0070659_100003257 3300005366 Bacteria 11551
16 Ga0070714_100236777 3300005435 Bacteria 1684
17 Ga0070711_100196771 3300005439 Bacteria 1553
18 Ga0070700_100034557 3300005441 Bacteria 3054
19 Ga0070663_100000424 3300005455 Bacteria 22242
20 Ga0070681_10359587 3300005458 Bacteria 1366
21 Ga0070685_10289802 3300005466 Bacteria 1099
22 Ga0070679_100093573 3300005530 Bacteria 2993
23 Ga0070664_100002589 3300005564 Bacteria 14596
24 Ga0070664_100176155 3300005564 Bacteria 1899
25 Ga0068857_100105885 3300005577 Bacteria 2525
26 Ga0068857_100178895 3300005577 Bacteria 1930
27 Ga0068854_100307193 3300005578 Bacteria 1285
28 Ga0068852_100006609 3300005616 Bacteria 8398
29 Ga0068859_100646904 3300005617 Bacteria 1149
30 Ga0068864_100012409 3300005618 Bacteria 7046
31 Ga0068864_100035826 3300005618 Bacteria 4226
32 Ga0068864_100463467 3300005618 Bacteria 1214
33 Ga0068861_100027869 3300005719 Bacteria 4119
34 Ga0068858_100210287 3300005842 Bacteria 1841
35 Ga0068858_100370221 3300005842 Bacteria 1374
36 Ga0068860_100645315 3300005843 Bacteria 1066
37 Ga0068862_100007825 3300005844 Bacteria 8841
38 Ga0068862_100392781 3300005844 Bacteria 1296
39 Ga0068862_100532698 3300005844 Bacteria 1119
40 Ga0081540_1042491 3300005983 Bacteria 2344
41 Ga0081539_10001116 3300005985 Bacteria 48712
42 Ga0075364_10049740 3300006051 Bacteria 2735
43 Ga0075428_100063739 3300006844 Bacteria 4035
44 Ga0075428_100080826 3300006844 Bacteria 3548
45 Ga0075434_100471659 3300006871 Bacteria 1276
46 Ga0075429_100069241 3300006880 Bacteria 3072
47 Ga0075429_100169254 3300006880 Bacteria 1914
48 Ga0097620_100646921 3300006931 Bacteria 1149
49 Ga0111539_10005006 3300009094 Bacteria 17228
50 Ga0105245_10012015 3300009098 Bacteria 7529
51 Ga0105247_10000118 3300009101 Bacteria 77424
52 Ga0114129_10005749 3300009147 Bacteria 17573
53 Ga0114129_10166481 3300009147 Bacteria 3008
54 Ga0114129_10380700 3300009147 Bacteria 1864
55 Ga0105243_10439151 3300009148 Bacteria 1222
56 Ga0105241_10930049 3300009174 Bacteria 809
57 Ga0105248_10021833 3300009177 Bacteria 7093
58 Ga0105248_10040762 3300009177 Bacteria 5205
59 Ga0105248_10173106 3300009177 Bacteria 2433
60 Ga0105248_11362501 3300009177 Bacteria 803
61 Ga0105237_10094099 3300009545 Bacteria 2986
62 Ga0105239_10109342 3300010375 Bacteria 3063
63 Ga0157371_10224082 3300013102 Bacteria 1350
64 Ga0157369_10227714 3300013105 Bacteria 1950
65 Ga0157369_10803294 3300013105 Bacteria 966
66 Ga0163163_10007492 3300014325 Bacteria 9632
67 Ga0163163_10264730 3300014325 Bacteria 1770
68 Ga0163163_10725656 3300014325 Bacteria 1057
69 Ga0157377_10010537 3300014745 Bacteria 4576
70 Ga0157379_10037409 3300014968 Bacteria 4327
71 Ga0157379_10041058 3300014968 Bacteria 4129
72 Ga0163161_10496221 3300017792 Bacteria 993
73 Ga0207710_10000029 3300025900 Bacteria 289155
74 Ga0207647_10166220 3300025904 Bacteria 1286
75 Ga0207645_10096009 3300025907 Bacteria 1909
76 Ga0207705_10083914 3300025909 Bacteria 2325
77 Ga0207657_10293518 3300025919 Bacteria 1289
78 Ga0207681_10030800 3300025923 Bacteria 3500
79 Ga0207650_10545278 3300025925 Bacteria 972
80 Ga0207659_10027663 3300025926 Bacteria 3843
81 Ga0207687_10052542 3300025927 Bacteria 2844
82 Ga0207664_10291537 3300025929 Bacteria 1434
83 Ga0207664_10791741 3300025929 Bacteria 853
84 Ga0207690_10200467 3300025932 Bacteria 1515
85 Ga0207706_10108530 3300025933 Bacteria 2442
86 Ga0207704_10088977 3300025938 Bacteria 2022
87 Ga0207711_10020561 3300025941 Bacteria 5507
88 Ga0207711_10073169 3300025941 Bacteria 2978
89 Ga0207711_10078560 3300025941 Bacteria 2879
90 Ga0207689_10012661 3300025942 Bacteria 7207
91 Ga0207689_10297907 3300025942 Bacteria 1337
92 Ga0207661_10016617 3300025944 Bacteria 5432
93 Ga0207661_10580870 3300025944 Bacteria 1028
94 Ga0207679_10005668 3300025945 Bacteria 7833
95 Ga0207679_10192017 3300025945 Bacteria 1699
96 Ga0207640_10081813 3300025981 Bacteria 2209
97 Ga0207640_10143526 3300025981 Bacteria 1744
98 Ga0207703_10145018 3300026035 Bacteria 2064
99 Ga0207678_10000033 3300026067 Bacteria 105464
100 Ga0207708_10096657 3300026075 Bacteria 2283
101 Ga0207641_10091673 3300026088 Bacteria 2660
102 Ga0207641_10203433 3300026088 Bacteria 1827
103 Ga0207641_10871035 3300026088 Bacteria 893
104 Ga0207674_10372662 3300026116 Bacteria 1380
105 Ga0207675_100045261 3300026118 Bacteria 4111
106 Ga0207698_10005860 3300026142 Bacteria 7635
107 Ga0207428_10039318 3300027907 Bacteria 3841
108 Ga0268265_10279111 3300028380 Bacteria 1494
109 Ga0268265_10530318 3300028380 Bacteria 1114
110 Ga0307515_10048679 3300028794 Bacteria 6403
111 Ga0307515_10339974 3300028794 Bacteria 1154
112 Ga0307512_10005367 3300030522 Bacteria 13408
113 Ga0265327_10094646 3300031251 Bacteria 1451
114 Ga0307513_10016026 3300031456 Bacteria 9059
115 Ga0307513_10611037 3300031456 Bacteria 799
116 Ga0307509_10379038 3300031507 Bacteria 1128
117 Ga0307508_10300906 3300031616 Bacteria 1197
118 Ga0316578_10146760 3300031728 Bacteria 1421
119 Ga0307413_10005546 3300031824 Bacteria 5647
120 Ga0307413_10014976 3300031824 Bacteria 3960
121 Ga0307413_10082042 3300031824 Bacteria 2070
122 Ga0307518_10000474 3300031838 Bacteria 30579
123 Ga0307406_10510868 3300031901 Bacteria 976
124 Ga0307409_100119419 3300031995 Bacteria 2229
125 Ga0307415_100207171 3300032126 Bacteria 1561
126 Ga0307415_100403963 3300032126 Bacteria 1167
127 Ga0307507_10008047 3300033179 Bacteria 14843
128 Ga0307507_10104307 3300033179 Bacteria 2353
129 Ga0307510_10149518 3300033180 Bacteria 1958
130 Ga0373955_0107133 3300035172 Bacteria 1612
131 Ga0316574_0012519 3300035398 Bacteria 4854
132 Ga0395898_0770371 3300037466 Bacteria 903
133 Ga0395905_0127347 3300037471 Bacteria 2395
134 Ga0451793_0348906 3300041452 Bacteria 1504
135 Ga0439448_0119019 3300042005 Bacteria 906
136 Ga0439449_0041492 3300042007 Bacteria 1711
137 Ga0466969_0012596 3300044656 Bacteria 4457
138 Ga0466972_0002517 3300044658 Bacteria 9067
139 Ga0466965_0106034 3300044683 Bacteria 1441
140 Ga0466966_0012655 3300044684 Bacteria 5591
141 Ga0466966_0022585 3300044684 Bacteria 4127
142 Ga0466966_0270274 3300044684 Bacteria 1023
143 Ga0466961_0001570 3300044693 Bacteria 14151
144 Ga0466961_0038880 3300044693 Bacteria 3051
145 Ga0466961_0100541 3300044693 Bacteria 1822
146 Ga0466961_0135295 3300044693 Bacteria 1544
147 Ga0466961_0254158 3300044693 Bacteria 1079
148 Ga0466963_0115084 3300044694 Bacteria 1848
149 Ga0466971_0015358 3300044719 Bacteria 3369
150 Ga0466968_0008952 3300044735 Bacteria 3845
151 Ga0466957_0005146 3300044842 Bacteria 7311
152 Ga0466960_0000720 3300044901 Bacteria 11561
153 Ga0466960_0082451 3300044901 Bacteria 1623
154 Ga0466960_0082935 3300044901 Bacteria 1619
155 Ga0466959_0097205 3300045049 Bacteria 2110
156 Ga0466958_0032045 3300045836 Bacteria 3125
157 Ga0466967_0017001 3300045976 Bacteria 5756
158 Ga0466967_0158420 3300045976 Bacteria 2123
159 Ga0495592_0066893 3300046454 Bacteria 2628
160 Ga0495651_0000579 3300046462 Bacteria 28406
161 Ga0495628_0007806 3300046516 Bacteria 9221
162 Ga0495587_0083137 3300046536 Bacteria 1855
163 Ga0495645_0020600 3300046543 Bacteria 4762
164 Ga0495613_0391022 3300046689 Bacteria 950
165 Ga0495600_0039952 3300046809 Bacteria 3055
166 Ga0495581_0111335 3300047315 Bacteria 1592
167 Ga0495604_0037065 3300047317 Bacteria 3842
168 Ga0495674_0248298 3300047319 Bacteria 1465
169 Ga0495593_0179852 3300047673 Bacteria 1065
170 Ga0496104_0017980 3300048907 Bacteria 6445
171 Ga0496108_0012297 3300048911 Bacteria 6963
172 Ga0496109_0021957 3300048912 Bacteria 5651
173 Ga0496110_0345898 3300048913 Bacteria 1354
174 Ga0496111_0002359 3300048914 Bacteria 11380
175 Ga0496112_0068149 3300048915 Bacteria 3513
176 Ga0496113_0020500 3300048916 Bacteria 4648
177 Ga0496114_0081309 3300048917 Bacteria 2737
178 Ga0496115_0645620 3300048918 Bacteria 837
179 Ga0496119_0000357 3300048922 Bacteria 64157
180 Ga0496120_0000230 3300048923 Bacteria 96223
181 Ga0496126_0000529 3300048929 Bacteria 73936
182 Ga0501033_0138529 3300049570 Bacteria 1760
183 Ga0501070_0474958 3300049586 Bacteria 1006
184 Ga0501080_0442340 3300049742 Bacteria 1166
185 nmdc:mga00v17_40831_c1 3300050491 Bacteria 1918
186 nmdc:mga05p37_29619_c1 3300050507 Bacteria 6680
187 nmdc:mga05p37_449455_c1 3300050507 Bacteria 1492
188 nmdc:mga09592_83529_c1 3300050508 Bacteria 2722
189 nmdc:mga08y16_26153_c1 3300050511 Bacteria 6155
190 nmdc:mga0n895_624650_c1 3300050512 Bacteria 1078
191 nmdc:mga0rr50_410885_c1 3300050513 Bacteria 1144
192 Ga0495601_0012259 3300053077 Bacteria 5141
193 Ga0495601_0415228 3300053077 Bacteria 872
194 Ga0495612_0021277 3300053078 Bacteria 2603
195 Ga0495619_0085354 3300053085 Bacteria 2132
196 Ga0500643_001030 3300053087 Bacteria 16943
197 Ga0500644_0061127 3300053088 Bacteria 1327
198 Ga0500646_0006986 3300053090 Bacteria 2876
199 Ga0500583_0104240 3300053092 Bacteria 1392
200 Ga0500660_049886 3300053100 Bacteria 2078
201 Ga0500573_0051733 3300053140 Bacteria 2362
202 Ga0500577_0006594 3300053142 Bacteria 3214
203 Ga0466962_0188890 3300061719 Bacteria 1005
204 Ga0466962_0272418 3300061719 Bacteria 834

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013105 Ga0157369_10803294 Ga0157369_108032941 181
2 3300042005 Ga0439448_0119019 Ga0439448_0119019_41_727 217
3 3300032126 Ga0307415_100207171 Ga0307415_1002071712 218
4 3300031728 Ga0316578_10146760 Ga0316578_101467601 220
5 3300035398 Ga0316574_0012519 Ga0316574_0012519_2210_2899 220
6 3300044693 Ga0466961_0254158 Ga0466961_0254158_49_810 220
7 iso_pu_bacteria 2671180195 2671834218 220
8 iso_pu_bacteria 2773857922 2774852374 220
9 3300025904 Ga0207647_10166220 Ga0207647_101662202 221
10 3300025907 Ga0207645_10096009 Ga0207645_100960092 221
11 3300049570 Ga0501033_0138529 Ga0501033_0138529_461_1207 221
12 iso_pu_bacteria 2751185734 2753070719 221
13 iso_pu_bacteria 2870721527 2870726714 221
14 3300005339 Ga0070660_100501474 Ga0070660_1005014741 222
15 3300044693 Ga0466961_0100541 Ga0466961_0100541_29_790 223
16 3300044735 Ga0466968_0008952 Ga0466968_0008952_927_1616 223
17 3300044901 Ga0466960_0000720 Ga0466960_0000720_3185_3874 223
18 3300047317 Ga0495604_0037065 Ga0495604_0037065_24_1040 223
19 iso_pu_bacteria 2684623035 2686536522 223
20 iso_pu_bacteria 2687453743 2689989987 223
21 iso_pu_bacteria 2895880812 2895883595 223
22 3300025919 Ga0207657_10293518 Ga0207657_102935182 224
23 3300042007 Ga0439449_0041492 Ga0439449_0041492_818_1516 224
24 3300005336 Ga0070680_100582195 Ga0070680_1005821951 225
25 3300005458 Ga0070681_10359587 Ga0070681_103595871 225
26 3300005530 Ga0070679_100093573 Ga0070679_1000935734 225
27 3300009147 Ga0114129_10005749 Ga0114129_100057498 225
28 3300037466 Ga0395898_0770371 Ga0395898_0770371_28_741 225
29 3300037471 Ga0395905_0127347 Ga0395905_0127347_1599_2312 225
30 3300050507 nmdc:mga05p37_29619_c1 nmdc:mga05p37_29619_c1_1919_2626 225
31 3300005327 Ga0070658_10075794 Ga0070658_100757944 226
32 3300025909 Ga0207705_10083914 Ga0207705_100839142 226
33 iso_pu_bacteria 2579778521 2579852279 226
34 iso_pu_bacteria 2619618881 2619857217 226
35 iso_pu_bacteria 2619619003 2620349773 226
36 iso_pu_bacteria 2626541554 2626637533 226
37 iso_pu_bacteria 8054913762 8054919783 226
38 iso_pu_bacteria 8054920844 8054921338 226
39 3300005329 Ga0070683_100380881 Ga0070683_1003808812 227
40 3300053100 Ga0500660_049886 Ga0500660_049886_219_935 227
41 iso_pu_bacteria 8001781756 8001789173 227
42 3300005331 Ga0070670_100031461 Ga0070670_1000314611 228
43 3300005334 Ga0068869_100028650 Ga0068869_1000286502 228
44 3300005338 Ga0068868_100010468 Ga0068868_1000104685 228
45 3300005339 Ga0070660_100237415 Ga0070660_1002374152 228
46 3300005345 Ga0070692_10045237 Ga0070692_100452372 228
47 3300005354 Ga0070675_100000806 Ga0070675_10000080615 228
48 3300005366 Ga0070659_100003257 Ga0070659_1000032579 228
49 3300005441 Ga0070700_100034557 Ga0070700_1000345573 228
50 3300005564 Ga0070664_100002589 Ga0070664_1000025896 228
51 3300005577 Ga0068857_100105885 Ga0068857_1001058852 228
52 3300005578 Ga0068854_100307193 Ga0068854_1003071931 228
53 3300005616 Ga0068852_100006609 Ga0068852_1000066093 228
54 3300005618 Ga0068864_100035826 Ga0068864_1000358263 228
55 3300005719 Ga0068861_100027869 Ga0068861_1000278694 228
56 3300005842 Ga0068858_100370221 Ga0068858_1003702212 228
57 3300005844 Ga0068862_100007825 Ga0068862_1000078252 228
58 3300009094 Ga0111539_10005006 Ga0111539_1000500610 228
59 3300009098 Ga0105245_10012015 Ga0105245_100120153 228
60 3300009148 Ga0105243_10439151 Ga0105243_104391512 228
61 3300010375 Ga0105239_10109342 Ga0105239_101093423 228
62 3300013102 Ga0157371_10224082 Ga0157371_102240822 228
63 3300014745 Ga0157377_10010537 Ga0157377_100105374 228
64 3300025923 Ga0207681_10030800 Ga0207681_100308002 228
65 3300025925 Ga0207650_10545278 Ga0207650_105452782 228
66 3300025926 Ga0207659_10027663 Ga0207659_100276633 228
67 3300025927 Ga0207687_10052542 Ga0207687_100525422 228
68 3300025932 Ga0207690_10200467 Ga0207690_102004671 228
69 3300025933 Ga0207706_10108530 Ga0207706_101085302 228
70 3300025938 Ga0207704_10088977 Ga0207704_100889773 228
71 3300025942 Ga0207689_10012661 Ga0207689_100126614 228
72 3300025944 Ga0207661_10016617 Ga0207661_100166173 228
73 3300025945 Ga0207679_10005668 Ga0207679_100056687 228
74 3300025981 Ga0207640_10081813 Ga0207640_100818133 228
75 3300026035 Ga0207703_10145018 Ga0207703_101450182 228
76 3300026075 Ga0207708_10096657 Ga0207708_100966573 228
77 3300026088 Ga0207641_10091673 Ga0207641_100916733 228
78 3300026116 Ga0207674_10372662 Ga0207674_103726622 228
79 3300026118 Ga0207675_100045261 Ga0207675_1000452614 228
80 3300026142 Ga0207698_10005860 Ga0207698_100058605 228
81 3300027907 Ga0207428_10039318 Ga0207428_100393183 228
82 3300028380 Ga0268265_10530318 Ga0268265_105303182 228
83 3300031995 Ga0307409_100119419 Ga0307409_1001194193 228
84 3300050511 nmdc:mga08y16_26153_c1 nmdc:mga08y16_26153_c1_2853_3575 228
85 3300050513 nmdc:mga0rr50_410885_c1 nmdc:mga0rr50_410885_c1_371_1093 228
86 3300053078 Ga0495612_0021277 Ga0495612_0021277_10_741 228
87 iso_pu_bacteria 2515154088 2515497372 228
88 iso_pu_bacteria 2515154137 2515758297 228
89 iso_pu_bacteria 2515154203 2516091820 228
90 iso_pu_bacteria 8003314358 8003314492 228
91 3300009101 Ga0105247_10000118 Ga0105247_100001189 229
92 3300009177 Ga0105248_10021833 Ga0105248_100218337 229
93 3300014325 Ga0163163_10264730 Ga0163163_102647302 229
94 3300014968 Ga0157379_10041058 Ga0157379_100410582 229
95 3300025900 Ga0207710_10000029 Ga0207710_10000029177 229
96 3300025941 Ga0207711_10020561 Ga0207711_100205615 229
97 3300048922 Ga0496119_0000357 Ga0496119_0000357_37713_38441 229
98 3300048923 Ga0496120_0000230 Ga0496120_0000230_63670_64398 229
99 3300053088 Ga0500644_0061127 Ga0500644_0061127_123_842 229
100 3300053142 Ga0500577_0006594 Ga0500577_0006594_1725_2444 229
101 iso_pu_bacteria 2917736166 2917745069 229
102 3300005435 Ga0070714_100236777 Ga0070714_1002367772 230
103 3300025929 Ga0207664_10291537 Ga0207664_102915372 230
104 3300030522 Ga0307512_10005367 Ga0307512_100053675 230
105 3300031824 Ga0307413_10082042 Ga0307413_100820422 230
106 3300044684 Ga0466966_0270274 Ga0466966_0270274_169_894 230
107 3300044901 Ga0466960_0082935 Ga0466960_0082935_479_1204 230
108 iso_pu_bacteria 2585427649 2586057591 230
109 iso_pu_bacteria 2899359706 2899363688 230
110 3300005347 Ga0070668_100003312 Ga0070668_1000033128 231
111 3300005455 Ga0070663_100000424 Ga0070663_10000042420 231
112 3300005844 Ga0068862_100392781 Ga0068862_1003927812 231
113 3300006844 Ga0075428_100063739 Ga0075428_1000637394 231
114 3300006880 Ga0075429_100069241 Ga0075429_1000692413 231
115 3300009147 Ga0114129_10166481 Ga0114129_101664813 231
116 3300009147 Ga0114129_10380700 Ga0114129_103807001 231
117 3300025944 Ga0207661_10580870 Ga0207661_105808701 231
118 3300025981 Ga0207640_10143526 Ga0207640_101435262 231
119 3300026067 Ga0207678_10000033 Ga0207678_1000003359 231
120 3300028380 Ga0268265_10279111 Ga0268265_102791112 231
121 3300028794 Ga0307515_10048679 Ga0307515_100486794 231
122 3300031507 Ga0307509_10379038 Ga0307509_103790381 231
123 3300031616 Ga0307508_10300906 Ga0307508_103009062 231
124 3300031901 Ga0307406_10510868 Ga0307406_105108681 231
125 3300041452 Ga0451793_0348906 Ga0451793_0348906_604_1395 231
126 3300046689 Ga0495613_0391022 Ga0495613_0391022_114_842 231
127 3300047319 Ga0495674_0248298 Ga0495674_0248298_203_931 231
128 3300047673 Ga0495593_0179852 Ga0495593_0179852_224_952 231
129 3300050507 nmdc:mga05p37_449455_c1 nmdc:mga05p37_449455_c1_704_1435 231
130 3300050508 nmdc:mga09592_83529_c1 nmdc:mga09592_83529_c1_701_1432 231
131 3300053077 Ga0495601_0415228 Ga0495601_0415228_106_834 231
132 3300053085 Ga0495619_0085354 Ga0495619_0085354_1278_2006 231
133 3300053087 Ga0500643_001030 Ga0500643_001030_4138_4866 231
134 iso_pu_bacteria 2784132109 2784472225 231
135 3300005334 Ga0068869_100275731 Ga0068869_1002757312 232
136 3300005344 Ga0070661_100366460 Ga0070661_1003664601 232
137 3300005466 Ga0070685_10289802 Ga0070685_102898021 232
138 3300005564 Ga0070664_100176155 Ga0070664_1001761552 232
139 3300005618 Ga0068864_100463467 Ga0068864_1004634671 232
140 3300005843 Ga0068860_100645315 Ga0068860_1006453151 232
141 3300005844 Ga0068862_100532698 Ga0068862_1005326981 232
142 3300006871 Ga0075434_100471659 Ga0075434_1004716592 232
143 3300009177 Ga0105248_11362501 Ga0105248_113625011 232
144 3300014325 Ga0163163_10725656 Ga0163163_107256562 232
145 3300025945 Ga0207679_10192017 Ga0207679_101920172 232
146 3300031456 Ga0307513_10611037 Ga0307513_106110371 232
147 3300032126 Ga0307415_100403963 Ga0307415_1004039631 232
148 3300033179 Ga0307507_10008047 Ga0307507_100080475 232
149 3300033180 Ga0307510_10149518 Ga0307510_101495182 232
150 3300044658 Ga0466972_0002517 Ga0466972_0002517_6366_7097 232
151 3300049586 Ga0501070_0474958 Ga0501070_0474958_163_939 232
152 3300049742 Ga0501080_0442340 Ga0501080_0442340_211_987 232
153 3300050512 nmdc:mga0n895_624650_c1 nmdc:mga0n895_624650_c1_224_955 232
154 3300053090 Ga0500646_0006986 Ga0500646_0006986_1731_2462 232
155 3300053092 Ga0500583_0104240 Ga0500583_0104240_157_888 232
156 iso_pu_bacteria 2582580736 2583149939 232
157 iso_pu_bacteria 2643221679 2644447055 232
158 iso_pu_bacteria 2772190715 2772643339 232
159 iso_pu_bacteria 2855670206 2855673619 232
160 iso_pu_bacteria 2855676851 2855677926 232
161 iso_pu_bacteria 2857288857 2857291082 232
162 iso_pu_bacteria 2858848962 2858854033 232
163 iso_pu_bacteria 2858882152 2858887016 232
164 iso_pu_bacteria 2858888857 2858894481 232
165 iso_pu_bacteria 2858895516 2858896398 232
166 iso_pu_bacteria 2867302475 2867307032 232
167 iso_pu_bacteria 2869048445 2869048912 232
168 iso_pu_bacteria 2869061728 2869064246 232
169 iso_pu_bacteria 2869068681 2869069382 232
170 iso_pu_bacteria 2880489317 2880495744 232
171 iso_pu_bacteria 2902582711 2902584052 232
172 iso_pu_bacteria 2929226422 2929231793 232
173 iso_pu_bacteria 2995463766 2995465339 232
174 iso_pu_bacteria 2996221748 2996224401 232
175 iso_pu_bacteria 8003870546 8003877146 232
176 iso_pu_bacteria 8047710418 8047717993 232
177 iso_pu_bacteria 8054727385 8054730043 232
178 iso_pu_bacteria 8054734606 8054737383 232
179 3300031456 Ga0307513_10016026 Ga0307513_100160266 233
180 3300031838 Ga0307518_10000474 Ga0307518_1000047416 233
181 3300044684 Ga0466966_0012655 Ga0466966_0012655_512_1258 233
182 3300044693 Ga0466961_0038880 Ga0466961_0038880_1307_2053 233
183 3300044719 Ga0466971_0015358 Ga0466971_0015358_1056_1802 233
184 3300045049 Ga0466959_0097205 Ga0466959_0097205_308_1054 233
185 3300017792 Ga0163161_10496221 Ga0163161_104962211 234
186 3300031824 Ga0307413_10005546 Ga0307413_100055465 234
187 3300044683 Ga0466965_0106034 Ga0466965_0106034_594_1331 234
188 3300044694 Ga0466963_0115084 Ga0466963_0115084_1084_1821 234
189 3300044842 Ga0466957_0005146 Ga0466957_0005146_5073_5810 234
190 3300044901 Ga0466960_0082451 Ga0466960_0082451_280_1035 234
191 3300045836 Ga0466958_0032045 Ga0466958_0032045_1232_1969 234
192 3300045976 Ga0466967_0158420 Ga0466967_0158420_702_1439 234
193 3300046454 Ga0495592_0066893 Ga0495592_0066893_634_1656 234
194 3300046462 Ga0495651_0000579 Ga0495651_0000579_14335_15357 234
195 3300046516 Ga0495628_0007806 Ga0495628_0007806_5900_6922 234
196 3300046536 Ga0495587_0083137 Ga0495587_0083137_584_1606 234
197 3300046543 Ga0495645_0020600 Ga0495645_0020600_2883_3905 234
198 3300046809 Ga0495600_0039952 Ga0495600_0039952_867_1889 234
199 3300053140 Ga0500573_0051733 Ga0500573_0051733_979_1830 234
200 iso_pu_bacteria 637000116 637878586 234
201 3300003203 JGI25406J46586_10002556 JGI25406J46586_100025565 235
202 3300005439 Ga0070711_100196771 Ga0070711_1001967711 235
203 3300005577 Ga0068857_100178895 Ga0068857_1001788952 235
204 3300005617 Ga0068859_100646904 Ga0068859_1006469041 235
205 3300005618 Ga0068864_100012409 Ga0068864_1000124093 235
206 3300005842 Ga0068858_100210287 Ga0068858_1002102872 235
207 3300005983 Ga0081540_1042491 Ga0081540_10424912 235
208 3300005985 Ga0081539_10001116 Ga0081539_1000111639 235
209 3300006051 Ga0075364_10049740 Ga0075364_100497403 235
210 3300006844 Ga0075428_100080826 Ga0075428_1000808262 235
211 3300006880 Ga0075429_100169254 Ga0075429_1001692543 235
212 3300006931 Ga0097620_100646921 Ga0097620_1006469211 235
213 3300009174 Ga0105241_10930049 Ga0105241_109300491 235
214 3300009177 Ga0105248_10040762 Ga0105248_100407624 235
215 3300009177 Ga0105248_10173106 Ga0105248_101731063 235
216 3300009545 Ga0105237_10094099 Ga0105237_100940994 235
217 3300013105 Ga0157369_10227714 Ga0157369_102277143 235
218 3300014325 Ga0163163_10007492 Ga0163163_100074922 235
219 3300014968 Ga0157379_10037409 Ga0157379_100374092 235
220 3300025929 Ga0207664_10791741 Ga0207664_107917411 235
221 3300025941 Ga0207711_10073169 Ga0207711_100731692 235
222 3300025941 Ga0207711_10078560 Ga0207711_100785603 235
223 3300025942 Ga0207689_10297907 Ga0207689_102979071 235
224 3300026088 Ga0207641_10203433 Ga0207641_102034332 235
225 3300026088 Ga0207641_10871035 Ga0207641_108710351 235
226 3300028794 Ga0307515_10339974 Ga0307515_103399742 235
227 3300031251 Ga0265327_10094646 Ga0265327_100946461 235
228 3300031824 Ga0307413_10014976 Ga0307413_100149763 235
229 3300033179 Ga0307507_10104307 Ga0307507_101043072 235
230 3300035172 Ga0373955_0107133 Ga0373955_0107133_40_891 235
231 3300044656 Ga0466969_0012596 Ga0466969_0012596_3364_4125 235
232 3300044684 Ga0466966_0022585 Ga0466966_0022585_3009_3770 235
233 3300044693 Ga0466961_0001570 Ga0466961_0001570_9631_10392 235
234 3300044693 Ga0466961_0135295 Ga0466961_0135295_448_1218 235
235 3300045976 Ga0466967_0017001 Ga0466967_0017001_4247_5026 235
236 3300047315 Ga0495581_0111335 Ga0495581_0111335_130_873 235
237 3300048907 Ga0496104_0017980 Ga0496104_0017980_688_1431 235
238 3300048911 Ga0496108_0012297 Ga0496108_0012297_93_836 235
239 3300048912 Ga0496109_0021957 Ga0496109_0021957_1573_2316 235
240 3300048913 Ga0496110_0345898 Ga0496110_0345898_79_822 235
241 3300048914 Ga0496111_0002359 Ga0496111_0002359_5172_5915 235
242 3300048915 Ga0496112_0068149 Ga0496112_0068149_2330_3073 235
243 3300048916 Ga0496113_0020500 Ga0496113_0020500_3462_4205 235
244 3300048917 Ga0496114_0081309 Ga0496114_0081309_1262_2020 235
245 3300048918 Ga0496115_0645620 Ga0496115_0645620_28_771 235
246 3300048929 Ga0496126_0000529 Ga0496126_0000529_67568_68311 235
247 3300050491 nmdc:mga00v17_40831_c1 nmdc:mga00v17_40831_c1_975_1721 235
248 3300053077 Ga0495601_0012259 Ga0495601_0012259_3165_3920 235
249 3300061719 Ga0466962_0188890 Ga0466962_0188890_208_978 235
250 3300061719 Ga0466962_0272418 Ga0466962_0272418_46_807 235

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01553

Acyltransferase

Acyltransferase

59

186

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kym-assembly1.cif.gz_A crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.821 16 210
5kym-assembly2.cif.gz_B crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.8168 16 203
1k30-assembly1.cif.gz_A crystal structure analysis of squash (cucurbita moschata) glycerol-3-phosphate (1)-acyltransferase 0.7089 35 202
5kym-assembly1.cif.gz_A crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.6574 16 210
5kym-assembly2.cif.gz_B crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.6202 16 203
ID Description Score Start End Superfamily
af_O07809_23_150_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9777 27 149 3.40.50.2000
af_O07809_23_150_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.933 27 149 3.40.50.2000
af_Q2FXJ7_19_144_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8865 27 147 3.40.50.2000
af_I6YDI9_312_439_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8849 27 147 3.40.50.620
af_Q4DRS8_153_366_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8815 27 147 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A6B3GNS9-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9918 24 164 GO:0003841
GO:0005886
GO:0006654
AF-A0A558AAW3-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9843 1 175 GO:0003841
GO:0005886
GO:0006654
AF-A0A6A7MQP0-F1-model_v4 deleted 0.9841 16 136
AF-A0A353FVN3-F1-model_v4 deleted 0.9801 21 147
AF-A0A5S4H9R7-F1-model_v4 1-acyl-sn-glycerol-3-phosphate acyltransferase 0.9781 1 230 GO:0003841
GO:0005886
GO:0006654

Feature Viewer

pLDDT pTM Quality
88.67 0.86 High
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Predicted Structure (AlphaFold2)

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