F361367

General Info

Members Datasets Scaffolds Average Seq Length
250 202 500 160

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100659226|Ga0070714_1006592261
Length 164
Sequence MNTARPAPGCPAMREDGGMLIERRLAELGFALPEWVRIWDGRAYVSGHGPLQPDGTVWPARGKVGADLAEEEGYVAARATGLAILASLRRALGDLDRVTAWLRVFGMVNTAPGFDRTPAVINGFSDLIVDLWGPEAGPHARSAIGVAELPFGIPVEIEAEVAIA

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
73 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
74 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
75 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
80 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
81 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
82 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
83 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
84 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
95 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
96 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
97 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
98 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
101 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
112 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
113 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
114 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
115 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
133 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
140 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
141 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
142 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
158 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
159 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
173 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
174 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
184 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
185 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
186 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
187 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
188 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
189 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
190 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
194 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
195 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
196 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
197 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
198 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
199 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
200 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
201 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
202 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96
Metatranscriptomes 0
Isolates 4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.8
Nodule 0.4
Rhizoplane 1.6
Rhizosphere 82.4
Stem 0
Stem Tuber 0
Unclassified 8.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100659226 3300005435 Unclassified 1008
2 Ga0070658_10002462 3300005327 Bacteria 15469
3 Ga0070683_100786311 3300005329 Bacteria 912
4 Ga0070683_100843201 3300005329 Unclassified 879
5 Ga0070670_100877082 3300005331 Bacteria 813
6 Ga0070682_100185628 3300005337 Bacteria 1456
7 Ga0070675_100031529 3300005354 Bacteria 4285
8 Ga0070714_100037204 3300005435 Bacteria 4088
9 Ga0070713_100040378 3300005436 Bacteria 3793
10 Ga0070713_101037227 3300005436 Bacteria 792
11 Ga0070711_100339982 3300005439 Bacteria 1204
12 Ga0070678_100829936 3300005456 Bacteria 841
13 Ga0070706_100009223 3300005467 Bacteria 9192
14 Ga0070706_100110427 3300005467 Bacteria 2559
15 Ga0070706_100794603 3300005467 Bacteria 876
16 Ga0070707_100003495 3300005468 Bacteria 14826
17 Ga0070707_100010544 3300005468 Bacteria 8608
18 Ga0070698_100009799 3300005471 Bacteria 10242
19 Ga0070699_100387041 3300005518 Bacteria 1263
20 Ga0070697_100997362 3300005536 Bacteria 744
21 Ga0068853_100012950 3300005539 Bacteria 6799
22 Ga0070672_100274619 3300005543 Bacteria 1424
23 Ga0068855_101338054 3300005563 Bacteria 740
24 Ga0070664_100596366 3300005564 Bacteria 1024
25 Ga0068856_100093621 3300005614 Bacteria 2990
26 Ga0070702_100981525 3300005615 Bacteria 667
27 Ga0068859_100282963 3300005617 Bacteria 1751
28 Ga0068861_100221342 3300005719 Bacteria 1600
29 Ga0068858_100007447 3300005842 Bacteria 10581
30 Ga0068858_100929208 3300005842 Unclassified 851
31 Ga0068860_100193679 3300005843 Bacteria 1968
32 Ga0081540_1007812 3300005983 Bacteria 7568
33 Ga0081539_10071448 3300005985 Bacteria 1859
34 Ga0097621_100823508 3300006237 Bacteria 861
35 Ga0068871_100195992 3300006358 Bacteria 1742
36 Ga0075428_100212581 3300006844 Bacteria 2090
37 Ga0075431_100397267 3300006847 Bacteria 1380
38 Ga0075433_10370923 3300006852 Unclassified 1264
39 Ga0075429_100007685 3300006880 Bacteria 9360
40 Ga0097620_100282989 3300006931 Bacteria 1751
41 Ga0105247_10048838 3300009101 Bacteria 2600
42 Ga0105248_10032258 3300009177 Bacteria 5856
43 Ga0105248_10826041 3300009177 Unclassified 1046
44 Ga0105237_10038387 3300009545 Bacteria 4835
45 Ga0105249_10168962 3300009553 Bacteria 2119
46 Ga0105239_10011890 3300010375 Bacteria 9710
47 Ga0105239_10022621 3300010375 Bacteria 6930
48 Ga0157378_10636706 3300013297 Bacteria 1081
49 Ga0157372_11634089 3300013307 Bacteria 742
50 Ga0182008_10504351 3300014497 Unclassified 666
51 Ga0157379_10017666 3300014968 Bacteria 6283
52 Ga0163161_10473598 3300017792 Bacteria 1016
53 Ga0213876_10027356 3300021384 Bacteria 3010
54 Ga0207710_10017018 3300025900 Bacteria 3080
55 Ga0207688_10304475 3300025901 Bacteria 975
56 Ga0207705_10001698 3300025909 Bacteria 17517
57 Ga0207695_11445828 3300025913 Bacteria 568
58 Ga0207693_10646953 3300025915 Unclassified 821
59 Ga0207646_10008303 3300025922 Bacteria 10421
60 Ga0207646_10080027 3300025922 Bacteria 2921
61 Ga0207646_10112426 3300025922 Unclassified 2445
62 Ga0207650_10657037 3300025925 Bacteria 884
63 Ga0207687_10137265 3300025927 Bacteria 1851
64 Ga0207700_10001473 3300025928 Bacteria 13346
65 Ga0207700_10317476 3300025928 Bacteria 1349
66 Ga0207664_10052437 3300025929 Bacteria 3226
67 Ga0207664_10788272 3300025929 Bacteria 855
68 Ga0207644_10461572 3300025931 Bacteria 1044
69 Ga0207711_10020194 3300025941 Bacteria 5551
70 Ga0207661_10632941 3300025944 Bacteria 983
71 Ga0207661_11000125 3300025944 Unclassified 770
72 Ga0207679_10489944 3300025945 Bacteria 1096
73 Ga0207667_10019810 3300025949 Bacteria 7499
74 Ga0207712_10209061 3300025961 Bacteria 1553
75 Ga0207640_11340363 3300025981 Bacteria 640
76 Ga0207658_10513456 3300025986 Bacteria 1069
77 Ga0207703_10015129 3300026035 Bacteria 6022
78 Ga0207639_10167218 3300026041 Bacteria 1859
79 Ga0207702_10011643 3300026078 Bacteria 7327
80 Ga0207683_10465241 3300026121 Bacteria 1166
81 Ga0268266_10500446 3300028379 Bacteria 1160
82 Ga0268264_10548744 3300028381 Bacteria 1133
83 Ga0265337_1019273 3300028556 Bacteria 2153
84 Ga0265319_1001657 3300028563 Bacteria 12881
85 Ga0265334_10018004 3300028573 Bacteria 2913
86 Ga0265318_10014424 3300028577 Bacteria 3317
87 Ga0265322_10033925 3300028654 Bacteria 1455
88 Ga0265336_10001717 3300028666 Bacteria 9624
89 Ga0307517_10112528 3300028786 Bacteria 2061
90 Ga0307515_10000215 3300028794 Bacteria 142594
91 Ga0307515_10229013 3300028794 Bacteria 1656
92 Ga0265338_10061423 3300028800 Bacteria 3293
93 Ga0265324_10004849 3300029957 Bacteria 5934
94 Ga0265330_10020887 3300031235 Bacteria 2992
95 Ga0265320_10003896 3300031240 Bacteria 9868
96 Ga0265325_10015176 3300031241 Bacteria 4338
97 Ga0265329_10020563 3300031242 Bacteria 2228
98 Ga0265340_10020038 3300031247 Bacteria 3441
99 Ga0265331_10013430 3300031250 Bacteria 4404
100 Ga0265327_10052655 3300031251 Bacteria 2118
101 Ga0265316_10012413 3300031344 Bacteria 7641
102 Ga0265313_10024514 3300031595 Bacteria 3221
103 Ga0307508_10017546 3300031616 Bacteria 6507
104 Ga0307508_10080137 3300031616 Bacteria 2847
105 Ga0307514_10202396 3300031649 Bacteria 1246
106 Ga0265314_10007131 3300031711 Bacteria 9742
107 Ga0265342_10042712 3300031712 Bacteria 2738
108 Ga0265342_10094599 3300031712 Unclassified 1709
109 Ga0307407_10282001 3300031903 Bacteria 1151
110 Ga0307409_100200154 3300031995 Bacteria 1786
111 Ga0307409_101670899 3300031995 Bacteria 665
112 Ga0307507_10030992 3300033179 Bacteria 5623
113 Ga0373934_0073259 3300035086 Bacteria 1371
114 Ga0373932_0040624 3300035112 Bacteria 1340
115 Ga0373953_0047679 3300035117 Bacteria 1724
116 Ga0373956_0001652 3300035119 Bacteria 9178
117 Ga0373956_0012237 3300035119 Bacteria 3552
118 Ga0373955_0056789 3300035172 Bacteria 2148
119 Ga0373931_0119452 3300035691 Unclassified 1505
120 Ga0373935_0362808 3300035692 Bacteria 1035
121 Ga0373937_0084897 3300036401 Bacteria 2930
122 Ga0373937_0106401 3300036401 Bacteria 2607
123 Ga0373937_1291299 3300036401 Bacteria 678
124 Ga0395899_0014203 3300037312 Bacteria 6077
125 Ga0395899_0089029 3300037312 Bacteria 2239
126 Ga0395899_0149700 3300037312 Bacteria 1655
127 Ga0395900_0000023 3300037418 Bacteria 336048
128 Ga0395900_0386528 3300037418 Bacteria 1366
129 Ga0395900_1099220 3300037418 Bacteria 712
130 Ga0395898_0001939 3300037466 Bacteria 26260
131 Ga0395898_0024563 3300037466 Bacteria 6077
132 Ga0395898_0263646 3300037466 Unclassified 1643
133 Ga0395898_0803236 3300037466 Unclassified 881
134 Ga0395905_0018910 3300037471 Bacteria 6533
135 Ga0395905_0064873 3300037471 Bacteria 3418
136 Ga0395905_0340554 3300037471 Bacteria 1391
137 Ga0436364_0409258 3300037853 Bacteria 765
138 Ga0436364_0756298 3300037853 Bacteria 1155
139 Ga0436364_1124860 3300037853 Bacteria 1933
140 Ga0395901_0000018 3300038443 Bacteria 336048
141 Ga0395901_0054343 3300038443 Bacteria 4162
142 Ga0400489_11134 3300039093 Bacteria 8203
143 Ga0400489_26792 3300039093 Bacteria 1280
144 Ga0436365_1113580 3300039437 Bacteria 8736
145 Ga0436365_1154532 3300039437 Bacteria 23597
146 Ga0436365_1526990 3300039437 Bacteria 3113
147 Ga0436363_1247380 3300039450 Bacteria 1359
148 Ga0436362_0076929 3300039453 Unclassified 550
149 Ga0439465_0127204 3300041413 Bacteria 897
150 Ga0466966_0359996 3300044684 Unclassified 874
151 Ga0466961_0274381 3300044693 Bacteria 1033
152 Ga0466963_0142345 3300044694 Bacteria 1662
153 Ga0453684_0624974 3300044712 Bacteria 1178
154 Ga0466959_0463710 3300045049 Unclassified 858
155 Ga0466959_0525153 3300045049 Bacteria 799
156 Ga0466958_0041604 3300045836 Bacteria 2764
157 Ga0466958_0366912 3300045836 Bacteria 928
158 Ga0466958_0744465 3300045836 Bacteria 639
159 Ga0466967_0858807 3300045976 Bacteria 902
160 Ga0495592_0148159 3300046454 Bacteria 1625
161 Ga0495629_0685899 3300046459 Bacteria 681
162 Ga0495651_0057502 3300046462 Bacteria 2985
163 Ga0495653_0030806 3300046463 Bacteria 4269
164 Ga0495650_0195424 3300046471 Bacteria 705
165 Ga0495664_0192395 3300046477 Bacteria 1236
166 Ga0495608_0159556 3300046511 Bacteria 1434
167 Ga0495608_0707087 3300046511 Unclassified 599
168 Ga0495610_0215318 3300046512 Bacteria 778
169 Ga0495618_0216816 3300046514 Bacteria 1208
170 Ga0495628_0081153 3300046516 Bacteria 2519
171 Ga0495630_0043837 3300046517 Bacteria 3343
172 Ga0495643_0045164 3300046522 Bacteria 2392
173 Ga0495586_0185157 3300046535 Bacteria 1179
174 Ga0495587_0092771 3300046536 Bacteria 1743
175 Ga0495645_0079047 3300046543 Bacteria 2363
176 Ga0495667_0170285 3300046559 Bacteria 1399
177 Ga0495634_0131047 3300046642 Bacteria 1598
178 Ga0495635_0017953 3300046663 Bacteria 4940
179 Ga0495657_0026271 3300046675 Bacteria 4123
180 Ga0495599_0131643 3300046678 Bacteria 1553
181 Ga0495623_0164197 3300046679 Bacteria 1303
182 Ga0495646_0357387 3300046680 Bacteria 764
183 Ga0495649_0298849 3300046694 Bacteria 820
184 Ga0495604_0058370 3300047317 Bacteria 2963
185 Ga0495680_0015195 3300047322 Bacteria 6648
186 Ga0495675_0430755 3300047444 Bacteria 765
187 Ga0495684_0148844 3300047471 Bacteria 1751
188 Ga0495602_0051397 3300048088 Bacteria 3670
189 Ga0496102_0437448 3300048905 Bacteria 1228
190 Ga0496110_0499371 3300048913 Bacteria 1108
191 Ga0496111_0289754 3300048914 Bacteria 1214
192 Ga0496113_0468640 3300048916 Bacteria 1012
193 Ga0496116_0054067 3300048919 Bacteria 2648
194 Ga0496117_0046790 3300048920 Bacteria 3109
195 Ga0496118_0056780 3300048921 Bacteria 2940
196 Ga0496121_0044913 3300048924 Bacteria 3804
197 Ga0496121_0045395 3300048924 Bacteria 3776
198 Ga0496121_0590487 3300048924 Bacteria 687
199 Ga0496122_0067410 3300048925 Bacteria 2578
200 Ga0496123_0030373 3300048926 Bacteria 3956
201 Ga0496124_0173777 3300048927 Bacteria 1665
202 Ga0496125_0021612 3300048928 Bacteria 5997
203 Ga0501031_0875526 3300049568 Bacteria 575
204 Ga0501034_0359079 3300049571 Unclassified 1384
205 Ga0501036_0036223 3300049572 Bacteria 4175
206 Ga0501036_0286108 3300049572 Bacteria 1379
207 Ga0501037_0203550 3300049573 Bacteria 1398
208 Ga0501038_0053486 3300049574 Bacteria 3476
209 Ga0501038_1222671 3300049574 Bacteria 545
210 Ga0501039_0082990 3300049575 Bacteria 2496
211 Ga0501039_0110799 3300049575 Bacteria 2146
212 Ga0501043_0024983 3300049579 Bacteria 4688
213 Ga0501046_0332986 3300049580 Bacteria 1104
214 Ga0501046_0418933 3300049580 Unclassified 966
215 Ga0501047_0089257 3300049581 Bacteria 2960
216 Ga0501071_0929268 3300049587 Bacteria 671
217 Ga0501075_0586552 3300049591 Bacteria 850
218 Ga0501077_0091321 3300049593 Bacteria 1930
219 Ga0501077_0624205 3300049593 Bacteria 692
220 Ga0501081_0019227 3300049743 Bacteria 4546
221 Ga0501081_0673746 3300049743 Unclassified 776
222 Ga0501083_0106305 3300049744 Bacteria 1848
223 Ga0501035_0144511 3300049822 Bacteria 2066
224 Ga0501044_0337485 3300049823 Bacteria 1428
225 Ga0501045_0109038 3300049824 Bacteria 2052
226 nmdc:mga09592_244936_c1 3300050508 Bacteria 1554
227 nmdc:mga06r32_260599_c1 3300050510 Bacteria 1414
228 nmdc:mga0n895_279707_c1 3300050512 Bacteria 1692
229 nmdc:mga08x19_44296_c1 3300050514 Bacteria 2841
230 nmdc:mga0a205_340015_c1 3300050515 Unclassified 1369
231 nmdc:mga0sz30_37255_c1 3300050516 Bacteria 2035
232 Ga0495595_0269367 3300053084 Bacteria 854
233 Ga0500651_0074758 3300053093 Bacteria 2106
234 Ga0500641_0101863 3300053096 Bacteria 1232
235 Ga0500658_0004156 3300053134 Bacteria 5438
236 Ga0500568_0000249 3300053139 Bacteria 45843
237 Ga0500604_0017161 3300053151 Bacteria 2000
238 Ga0500622_0000228 3300053156 Bacteria 58436
239 Ga0501084_0021183 3300054114 Bacteria 5421
240 Ga0501082_0088850 3300060353 Bacteria 2667
241 2511196666 2510917030 Bacteria 7460662
242 2585226781 2582581298 Bacteria 7315509
243 2585550196 2585427529 Bacteria 7395659
244 2867314670 2867312974 Bacteria 7058875
245 2867322316 2867319477 Bacteria 7069771
246 2919105848 2919100787 Bacteria 7710546
247 3005447877 3005445848 Bacteria 6906074
248 8046769878 8046767195 Bacteria 7547379
249 8047712567 8047710418 Bacteria 11023148
250 8057577839 8057575449 Bacteria 7367519
251 Ga0070714_100659226
252 Ga0070658_10002462
253 Ga0070683_100786311
254 Ga0070683_100843201
255 Ga0070670_100877082
256 Ga0070682_100185628
257 Ga0070675_100031529
258 Ga0070714_100037204
259 Ga0070713_100040378
260 Ga0070713_101037227
261 Ga0070711_100339982
262 Ga0070678_100829936
263 Ga0070706_100009223
264 Ga0070706_100110427
265 Ga0070706_100794603
266 Ga0070707_100003495
267 Ga0070707_100010544
268 Ga0070698_100009799
269 Ga0070699_100387041
270 Ga0070697_100997362
271 Ga0068853_100012950
272 Ga0070672_100274619
273 Ga0068855_101338054
274 Ga0070664_100596366
275 Ga0068856_100093621
276 Ga0070702_100981525
277 Ga0068859_100282963
278 Ga0068861_100221342
279 Ga0068858_100007447
280 Ga0068858_100929208
281 Ga0068860_100193679
282 Ga0081540_1007812
283 Ga0081539_10071448
284 Ga0097621_100823508
285 Ga0068871_100195992
286 Ga0075428_100212581
287 Ga0075431_100397267
288 Ga0075433_10370923
289 Ga0075429_100007685
290 Ga0097620_100282989
291 Ga0105247_10048838
292 Ga0105248_10032258
293 Ga0105248_10826041
294 Ga0105237_10038387
295 Ga0105249_10168962
296 Ga0105239_10011890
297 Ga0105239_10022621
298 Ga0157378_10636706
299 Ga0157372_11634089
300 Ga0182008_10504351
301 Ga0157379_10017666
302 Ga0163161_10473598
303 Ga0213876_10027356
304 Ga0207710_10017018
305 Ga0207688_10304475
306 Ga0207705_10001698
307 Ga0207695_11445828
308 Ga0207693_10646953
309 Ga0207646_10008303
310 Ga0207646_10080027
311 Ga0207646_10112426
312 Ga0207650_10657037
313 Ga0207687_10137265
314 Ga0207700_10001473
315 Ga0207700_10317476
316 Ga0207664_10052437
317 Ga0207664_10788272
318 Ga0207644_10461572
319 Ga0207711_10020194
320 Ga0207661_10632941
321 Ga0207661_11000125
322 Ga0207679_10489944
323 Ga0207667_10019810
324 Ga0207712_10209061
325 Ga0207640_11340363
326 Ga0207658_10513456
327 Ga0207703_10015129
328 Ga0207639_10167218
329 Ga0207702_10011643
330 Ga0207683_10465241
331 Ga0268266_10500446
332 Ga0268264_10548744
333 Ga0265337_1019273
334 Ga0265319_1001657
335 Ga0265334_10018004
336 Ga0265318_10014424
337 Ga0265322_10033925
338 Ga0265336_10001717
339 Ga0307517_10112528
340 Ga0307515_10000215
341 Ga0307515_10229013
342 Ga0265338_10061423
343 Ga0265324_10004849
344 Ga0265330_10020887
345 Ga0265320_10003896
346 Ga0265325_10015176
347 Ga0265329_10020563
348 Ga0265340_10020038
349 Ga0265331_10013430
350 Ga0265327_10052655
351 Ga0265316_10012413
352 Ga0265313_10024514
353 Ga0307508_10017546
354 Ga0307508_10080137
355 Ga0307514_10202396
356 Ga0265314_10007131
357 Ga0265342_10042712
358 Ga0265342_10094599
359 Ga0307407_10282001
360 Ga0307409_100200154
361 Ga0307409_101670899
362 Ga0307507_10030992
363 Ga0373934_0073259
364 Ga0373932_0040624
365 Ga0373953_0047679
366 Ga0373956_0001652
367 Ga0373956_0012237
368 Ga0373955_0056789
369 Ga0373931_0119452
370 Ga0373935_0362808
371 Ga0373937_0084897
372 Ga0373937_0106401
373 Ga0373937_1291299
374 Ga0395899_0014203
375 Ga0395899_0089029
376 Ga0395899_0149700
377 Ga0395900_0000023
378 Ga0395900_0386528
379 Ga0395900_1099220
380 Ga0395898_0001939
381 Ga0395898_0024563
382 Ga0395898_0263646
383 Ga0395898_0803236
384 Ga0395905_0018910
385 Ga0395905_0064873
386 Ga0395905_0340554
387 Ga0436364_0409258
388 Ga0436364_0756298
389 Ga0436364_1124860
390 Ga0395901_0000018
391 Ga0395901_0054343
392 Ga0400489_11134
393 Ga0400489_26792
394 Ga0436365_1113580
395 Ga0436365_1154532
396 Ga0436365_1526990
397 Ga0436363_1247380
398 Ga0436362_0076929
399 Ga0439465_0127204
400 Ga0466966_0359996
401 Ga0466961_0274381
402 Ga0466963_0142345
403 Ga0453684_0624974
404 Ga0466959_0463710
405 Ga0466959_0525153
406 Ga0466958_0041604
407 Ga0466958_0366912
408 Ga0466958_0744465
409 Ga0466967_0858807
410 Ga0495592_0148159
411 Ga0495629_0685899
412 Ga0495651_0057502
413 Ga0495653_0030806
414 Ga0495650_0195424
415 Ga0495664_0192395
416 Ga0495608_0159556
417 Ga0495608_0707087
418 Ga0495610_0215318
419 Ga0495618_0216816
420 Ga0495628_0081153
421 Ga0495630_0043837
422 Ga0495643_0045164
423 Ga0495586_0185157
424 Ga0495587_0092771
425 Ga0495645_0079047
426 Ga0495667_0170285
427 Ga0495634_0131047
428 Ga0495635_0017953
429 Ga0495657_0026271
430 Ga0495599_0131643
431 Ga0495623_0164197
432 Ga0495646_0357387
433 Ga0495649_0298849
434 Ga0495604_0058370
435 Ga0495680_0015195
436 Ga0495675_0430755
437 Ga0495684_0148844
438 Ga0495602_0051397
439 Ga0496102_0437448
440 Ga0496110_0499371
441 Ga0496111_0289754
442 Ga0496113_0468640
443 Ga0496116_0054067
444 Ga0496117_0046790
445 Ga0496118_0056780
446 Ga0496121_0044913
447 Ga0496121_0045395
448 Ga0496121_0590487
449 Ga0496122_0067410
450 Ga0496123_0030373
451 Ga0496124_0173777
452 Ga0496125_0021612
453 Ga0501031_0875526
454 Ga0501034_0359079
455 Ga0501036_0036223
456 Ga0501036_0286108
457 Ga0501037_0203550
458 Ga0501038_0053486
459 Ga0501038_1222671
460 Ga0501039_0082990
461 Ga0501039_0110799
462 Ga0501043_0024983
463 Ga0501046_0332986
464 Ga0501046_0418933
465 Ga0501047_0089257
466 Ga0501071_0929268
467 Ga0501075_0586552
468 Ga0501077_0091321
469 Ga0501077_0624205
470 Ga0501081_0019227
471 Ga0501081_0673746
472 Ga0501083_0106305
473 Ga0501035_0144511
474 Ga0501044_0337485
475 Ga0501045_0109038
476 nmdc:mga09592_244936_c1
477 nmdc:mga06r32_260599_c1
478 nmdc:mga0n895_279707_c1
479 nmdc:mga08x19_44296_c1
480 nmdc:mga0a205_340015_c1
481 nmdc:mga0sz30_37255_c1
482 Ga0495595_0269367
483 Ga0500651_0074758
484 Ga0500641_0101863
485 Ga0500658_0004156
486 Ga0500568_0000249
487 Ga0500604_0017161
488 Ga0500622_0000228
489 Ga0501084_0021183
490 Ga0501082_0088850
491 2511196666
492 2585226781
493 2585550196
494 2867314670
495 2867322316
496 2919105848
497 3005447877
498 8046769878
499 8047712567
500 8057577839

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14588

YjgF_endoribonc

YjgF/chorismate_mutase-like, putative endoribonuclease

23

153

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d01-assembly1.cif.gz_K error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9584 2 159
3d01-assembly3.cif.gz_C error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9554 2 159
3d01-assembly1.cif.gz_I error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9551 3 159
3d01-assembly4.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.953 2 159
2otm-assembly1.cif.gz_C crystal structure of a putative endoribonuclease (so_1960) from shewanella oneidensis mr-1 at 1.85 a resolution 0.9303 1 158
ID Description Score Start End Superfamily
af_I6YGW9_1_150_3.30.1330.40 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9455 1 158 3.30.1330.40
af_I6YGW9_1_150_3.30.1330.40 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9394 1 158 3.30.1330.40
2otmC00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.929 1 158 3.30.1330.40
3d01E00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.9255 2 159 3.30.1330.40
af_A4I058_2_156_3.30.1330.40 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;RutC-like 0.924 2 159 3.30.1330.40
ID Description Score Start End GO Terms
AF-A0A523MN70-F1-model_v4 RidA family protein 1.001 36 159
AF-A0A349LZT2-F1-model_v4 Uncharacterized protein 1 76 160
AF-A0A440CDI4-F1-model_v4 deleted 0.9995 59 160
AF-A0A0P8C2U5-F1-model_v4 Uncharacterized protein 0.9983 90 159
AF-A0A383BGQ0-F1-model_v4 Endoribonuclease L-PSP/chorismate mutase-like domain-containing protein 0.998 54 160

Map