F361196

General Info

Members Datasets Scaffolds Average Seq Length
249 206 166 276

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862290372|2862293854
Length 330
Sequence DLDREDVPQRRRAQPAEGTAGPAGTAPPGTGLDAAAVTVAYDGTDVVHGADLRLPRGKVTALIGPNGSGKSTLLRAVARLHRARTGSVTVPRRSAADASTSGASTPGAPESNGHKDTGRTEHDDSGHLDALSLTRNEFARRITMLAQSRTAPSGLSVRDVVAFGRHPYRHRFRGTDPDGPRVVEHALAVTDVTGFADRGVEQLSGGQLQRVWLACCLAQDTDVLLLDEPTNHLDLRYQVEILDLIRDLADTHGVTVGVVLHDLDQAAAVADQVVLLAEGRVSAAGTPAEVYESERLTDTYGIRIEVESDPATGIPRTRAVGRHHLRLERS

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
3 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
4 2643221548 Streptomyces sp. Root55 Isolate Unclassified
5 2643221561 Nocardioides sp. Root151 Isolate Unclassified
6 2643221578 Streptomyces sp. Root63 Isolate Unclassified
7 2643221613 Oerskovia sp. Root22 Isolate Unclassified
8 2643221649 Leifsonia sp. Root4 Isolate Unclassified
9 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
10 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
11 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
12 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
13 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
14 2643221696 Nocardioides sp. Root140 Isolate Unclassified
15 2643221721 Oerskovia sp. Root918 Isolate Unclassified
16 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
17 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
18 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
19 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
20 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
21 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
22 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
23 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
24 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
25 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
26 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
27 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
28 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
29 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
30 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
31 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
32 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
33 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
34 2855683550 Micromonospora sp. RP3T Isolate Unclassified
35 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
36 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
37 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
38 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
39 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
40 2858882152 Micromonospora noduli MED15 Isolate Nodule
41 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
42 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
43 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
44 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
45 2862574272 Streptomyces sp. AcE210 Isolate Nodule
46 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
47 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
48 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
49 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
50 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
51 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
52 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
53 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
54 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
55 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
56 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
57 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
58 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
59 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
60 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
61 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
62 2928153084 Leifsonia sp. 563 Isolate Unclassified
63 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
64 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
65 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
66 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
67 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
68 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
69 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
70 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
71 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
72 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
73 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
74 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
75 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
76 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
77 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
78 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
79 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
80 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
81 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
82 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
83 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
84 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
85 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
86 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
87 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
88 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
89 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
90 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
91 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
92 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
93 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
94 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
95 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
96 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
97 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
98 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
99 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
100 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
101 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
102 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
103 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
104 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
105 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
106 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
107 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
108 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
109 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
110 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
111 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
112 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
113 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
114 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
115 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
116 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
117 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
118 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
119 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
120 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
124 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
125 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
127 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
144 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
145 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
146 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
147 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
148 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
149 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
150 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
151 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
152 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
153 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
154 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
155 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
156 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
157 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
158 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
159 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
160 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
161 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
162 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
163 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
164 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
165 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
166 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
167 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
171 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
172 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
173 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
189 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
192 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
193 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
194 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
195 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
198 649633069 Micromonospora sp. L5 Isolate Unclassified
199 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
200 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
201 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
202 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
203 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
204 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
205 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
206 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 65.86
Metatranscriptomes 0.8
Isolates 33.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.63
Nodule 2.81
Rhizoplane 3.21
Rhizosphere 59.84
Stem 0
Stem Tuber 0.4
Unclassified 26.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000949 3300002067 Bacteria 10348
2 JGI25164J39214_1000998 3300002772 Bacteria 8867
3 JGI25165J46597_1000005 3300003214 Bacteria 623702
4 rootL2_10231546 3300003322 Bacteria 1166
5 Ga0006562J51391_1008124 3300003578 Bacteria 25634
6 Ga0006562J51391_1008125 3300003578 Bacteria 24266
7 Ga0055539_1000005 3300003752 Bacteria 609598
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000290 3300003759 Bacteria 45300
10 Ga0055541_1009728 3300003841 Bacteria 1474
11 Ga0070658_10121408 3300005327 Bacteria 2171
12 Ga0070683_100153184 3300005329 Bacteria 2186
13 Ga0070683_100309974 3300005329 Bacteria 1502
14 Ga0070682_100035371 3300005337 Bacteria 3050
15 Ga0068868_100107924 3300005338 Bacteria 2259
16 Ga0070689_100440197 3300005340 Bacteria 1107
17 Ga0070668_100089647 3300005347 Bacteria 2423
18 Ga0070668_100160864 3300005347 Bacteria 1822
19 Ga0070659_100152076 3300005366 Bacteria 1888
20 Ga0070700_100083353 3300005441 Bacteria 2070
21 Ga0070663_100010349 3300005455 Bacteria 5814
22 Ga0070663_100014279 3300005455 Bacteria 5094
23 Ga0070663_100497564 3300005455 Bacteria 1012
24 Ga0070678_100045478 3300005456 Bacteria 3142
25 Ga0070685_10011302 3300005466 Bacteria 4674
26 Ga0068857_100198759 3300005577 Bacteria 1827
27 Ga0068854_100012224 3300005578 Bacteria 5617
28 Ga0068861_100271683 3300005719 Bacteria 1456
29 Ga0068863_100353125 3300005841 Bacteria 1432
30 Ga0068858_100162218 3300005842 Bacteria 2105
31 Ga0068862_100153707 3300005844 Bacteria 2049
32 Ga0081455_10009596 3300005937 Bacteria 9940
33 Ga0081538_10000907 3300005981 Bacteria 32006
34 Ga0075364_10005305 3300006051 Bacteria 7479
35 Ga0075428_100028694 3300006844 Bacteria 6156
36 Ga0075428_100059636 3300006844 Bacteria 4178
37 Ga0075430_100046309 3300006846 Bacteria 3673
38 Ga0075431_100068016 3300006847 Bacteria 3676
39 Ga0075431_100655204 3300006847 Bacteria 1030
40 Ga0075429_100002584 3300006880 Bacteria 15262
41 Ga0075429_100070571 3300006880 Bacteria 3042
42 Ga0105244_10047034 3300009036 Bacteria 2214
43 Ga0111539_10021126 3300009094 Bacteria 8016
44 Ga0105245_10020491 3300009098 Bacteria 5799
45 Ga0105245_10599616 3300009098 Bacteria 1128
46 Ga0105247_10066261 3300009101 Bacteria 2248
47 Ga0114129_10000544 3300009147 Bacteria 46212
48 Ga0114129_10031023 3300009147 Bacteria 7560
49 Ga0114129_10087516 3300009147 Bacteria 4319
50 Ga0114129_11073006 3300009147 Bacteria 1010
51 Ga0105237_10042379 3300009545 Bacteria 4590
52 Ga0105249_10311568 3300009553 Bacteria 1582
53 Ga0105032_102775 3300009979 Bacteria 1546
54 Ga0105239_10036395 3300010375 Bacteria 5404
55 Ga0105239_10198648 3300010375 Bacteria 2246
56 Ga0163162_10054359 3300013306 Bacteria 4028
57 Ga0157372_10163199 3300013307 Bacteria 2575
58 Ga0157372_10229766 3300013307 Bacteria 2151
59 Ga0157372_10395936 3300013307 Bacteria 1609
60 Ga0157375_10401527 3300013308 Bacteria 1537
61 Ga0163163_10252258 3300014325 Bacteria 1815
62 Ga0157380_10131490 3300014326 Bacteria 2136
63 Ga0157376_10055039 3300014969 Bacteria 3319
64 Ga0209566_100053 3300025225 Bacteria 224436
65 Ga0209674_100001 3300025226 Bacteria 4013750
66 Ga0209563_100001 3300025230 Bacteria 4013775
67 Ga0209563_100314 3300025230 Bacteria 19197
68 Ga0207427_100024 3300025231 Bacteria 438403
69 Ga0209437_100333 3300025233 Bacteria 58407
70 Ga0209677_100001 3300025253 Bacteria 4013787
71 Ga0209233_1000001 3300025261 Bacteria 2992747
72 Ga0207710_10049327 3300025900 Bacteria 1886
73 Ga0207688_10005807 3300025901 Bacteria 6716
74 Ga0207694_10068376 3300025924 Bacteria 2774
75 Ga0207687_10069864 3300025927 Bacteria 2506
76 Ga0207690_10368916 3300025932 Bacteria 1138
77 Ga0207706_10039273 3300025933 Bacteria 4195
78 Ga0207669_10402835 3300025937 Bacteria 1072
79 Ga0207689_10099211 3300025942 Bacteria 2393
80 Ga0207679_10280741 3300025945 Bacteria 1428
81 Ga0207703_10250770 3300026035 Bacteria 1595
82 Ga0207678_10000145 3300026067 Bacteria 58214
83 Ga0207678_10017151 3300026067 Bacteria 6358
84 Ga0207678_10066429 3300026067 Bacteria 3097
85 Ga0207678_10650583 3300026067 Bacteria 926
86 Ga0207676_10110044 3300026095 Bacteria 2304
87 Ga0207674_10044226 3300026116 Bacteria 4587
88 Ga0207675_100135104 3300026118 Bacteria 2340
89 Ga0207683_10057268 3300026121 Bacteria 3421
90 Ga0207698_10039119 3300026142 Bacteria 3510
91 Ga0207428_10088583 3300027907 Bacteria 2407
92 Ga0307512_10096571 3300030522 Bacteria 2026
93 Ga0307513_10000099 3300031456 Bacteria 125847
94 Ga0307408_100048590 3300031548 Bacteria 3044
95 Ga0307516_10136378 3300031730 Bacteria 2228
96 Ga0307405_10110425 3300031731 Bacteria 1862
97 Ga0307413_10079825 3300031824 Bacteria 2093
98 Ga0307518_10000601 3300031838 Bacteria 27469
99 Ga0307410_10115613 3300031852 Bacteria 1948
100 Ga0307410_10214612 3300031852 Bacteria 1476
101 Ga0307406_10016569 3300031901 Bacteria 4286
102 Ga0307406_10060303 3300031901 Bacteria 2446
103 Ga0307406_10103665 3300031901 Bacteria 1943
104 Ga0307409_100242029 3300031995 Bacteria 1643
105 Ga0307409_100485945 3300031995 Bacteria 1199
106 Ga0307416_100072412 3300032002 Bacteria 2868
107 Ga0307416_100218123 3300032002 Bacteria 1827
108 Ga0307411_10163886 3300032005 Bacteria 1669
109 Ga0307415_100004444 3300032126 Bacteria 7273
110 Ga0307415_100011766 3300032126 Bacteria 5026
111 Ga0307415_100082699 3300032126 Bacteria 2298
112 Ga0307415_100124659 3300032126 Bacteria 1939
113 Ga0307415_100164001 3300032126 Bacteria 1726
114 Ga0307415_100456312 3300032126 Bacteria 1106
115 Ga0373951_0000168 3300035091 Bacteria 23764
116 Ga0439436_0055071 3300041404 Bacteria 1118
117 Ga0451791_0311183 3300041451 Bacteria 2273
118 Ga0451793_0693316 3300041452 Bacteria 1146
119 Ga0451853_0293683 3300041512 Bacteria 4339
120 Ga0439449_0059351 3300042007 Bacteria 1412
121 Ga0466972_0245459 3300044658 Bacteria 837
122 Ga0466965_0007554 3300044683 Bacteria 5000
123 Ga0466965_0021966 3300044683 Bacteria 3075
124 Ga0466960_0050464 3300044901 Bacteria 2006
125 Ga0495641_0064056 3300046461 Bacteria 1656
126 Ga0495632_0120269 3300046519 Bacteria 1228
127 Ga0496102_0037778 3300048905 Bacteria 4357
128 Ga0496108_0096288 3300048911 Bacteria 2521
129 Ga0496111_0135534 3300048914 Bacteria 1824
130 Ga0496112_0445332 3300048915 Bacteria 1233
131 Ga0496114_0013050 3300048917 Bacteria 6657
132 Ga0496114_0196710 3300048917 Bacteria 1765
133 Ga0496117_0007372 3300048920 Bacteria 10766
134 Ga0496117_0009141 3300048920 Bacteria 9293
135 Ga0496118_0007832 3300048921 Bacteria 11203
136 Ga0496119_0132995 3300048922 Bacteria 1353
137 Ga0496122_0000575 3300048925 Bacteria 75355
138 Ga0496122_0023161 3300048925 Bacteria 5487
139 Ga0496123_0000333 3300048926 Bacteria 89644
140 Ga0496124_0002355 3300048927 Bacteria 24936
141 Ga0496125_0000086 3300048928 Bacteria 216489
142 Ga0496125_0003510 3300048928 Bacteria 18933
143 Ga0496126_0018966 3300048929 Bacteria 6794
144 Ga0501032_0197375 3300049569 Bacteria 1314
145 Ga0501034_0000492 3300049571 Bacteria 64181
146 Ga0501037_0109423 3300049573 Bacteria 1991
147 Ga0501038_0065735 3300049574 Bacteria 3089
148 Ga0501043_0022699 3300049579 Bacteria 4921
149 Ga0501046_0047985 3300049580 Bacteria 3383
150 Ga0501047_0025200 3300049581 Bacteria 5715
151 Ga0501069_0037138 3300049585 Bacteria 2688
152 Ga0501074_0068983 3300049590 Bacteria 2542
153 Ga0501044_0006347 3300049823 Bacteria 13071
154 Ga0501044_0118037 3300049823 Bacteria 2656
155 nmdc:mga00v17_43021_c1 3300050491 Bacteria 2719
156 nmdc:mga0yw44_298859_c1 3300050492 Bacteria 1078
157 nmdc:mga05p37_171133_c1 3300050507 Bacteria 2649
158 nmdc:mga05p37_2233_c1 3300050507 Bacteria 22562
159 nmdc:mga05p37_35940_c1 3300050507 Bacteria 6079
160 nmdc:mga09592_110814_c1 3300050508 Bacteria 2355
161 nmdc:mga09592_9349_c1 3300050508 Bacteria 7972
162 nmdc:mga06r32_49088_c1 3300050510 Bacteria 4036
163 nmdc:mga08y16_20507_c1 3300050511 Bacteria 6976
164 nmdc:mga08y16_396539_c1 3300050511 Bacteria 1413
165 Ga0500559_0000793 3300053136 Bacteria 20622
166 Ga0500559_0010126 3300053136 Bacteria 4056

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048914 Ga0496111_0135534 Ga0496111_0135534_28_747 232
2 3300046461 Ga0495641_0064056 Ga0495641_0064056_319_1164 233
3 3300010375 Ga0105239_10198648 Ga0105239_101986482 234
4 3300005329 Ga0070683_100153184 Ga0070683_1001531842 235
5 3300005337 Ga0070682_100035371 Ga0070682_1000353712 235
6 3300005456 Ga0070678_100045478 Ga0070678_1000454782 235
7 3300014326 Ga0157380_10131490 Ga0157380_101314902 239
8 3300050507 nmdc:mga05p37_35940_c1 nmdc:mga05p37_35940_c1_29_784 249
9 iso_pu_bacteria 2758568522 2760307195 252
10 3300013308 Ga0157375_10401527 Ga0157375_104015272 257
11 3300044683 Ga0466965_0021966 Ga0466965_0021966_852_1667 257
12 3300049569 Ga0501032_0197375 Ga0501032_0197375_336_1280 259
13 3300049590 Ga0501074_0068983 Ga0501074_0068983_58_1002 259
14 3300049823 Ga0501044_0118037 Ga0501044_0118037_1011_1973 259
15 3300049573 Ga0501037_0109423 Ga0501037_0109423_378_1376 260
16 3300049574 Ga0501038_0065735 Ga0501038_0065735_1745_2743 260
17 3300053136 Ga0500559_0000793 Ga0500559_0000793_168_968 260
18 3300053136 Ga0500559_0010126 Ga0500559_0010126_916_1716 260
19 iso_pu_bacteria 2501939600 2501942661 260
20 iso_pu_bacteria 8056060235 8056063178 260
21 3300048915 Ga0496112_0445332 Ga0496112_0445332_151_936 261
22 3300049580 Ga0501046_0047985 Ga0501046_0047985_221_1087 261
23 3300049585 Ga0501069_0037138 Ga0501069_0037138_1190_2056 261
24 iso_pu_bacteria 2585427649 2586063846 261
25 iso_pu_bacteria 2808606522 2809586905 261
26 iso_pu_bacteria 2915768154 2915772154 261
27 3300031838 Ga0307518_10000601 Ga0307518_100006016 262
28 iso_pu_bacteria 2751185734 2753071641 262
29 iso_pu_bacteria 2857737099 2857739664 262
30 iso_pu_bacteria 2870721527 2870729399 262
31 iso_pu_bacteria 2939660829 2939663986 262
32 3300005347 Ga0070668_100160864 Ga0070668_1001608642 263
33 3300005841 Ga0068863_100353125 Ga0068863_1003531251 263
34 3300026067 Ga0207678_10650583 Ga0207678_106505831 263
35 3300032126 Ga0307415_100164001 Ga0307415_1001640012 263
36 3300042007 Ga0439449_0059351 Ga0439449_0059351_273_1091 263
37 3300044658 Ga0466972_0245459 Ga0466972_0245459_10_822 263
38 3300049581 Ga0501047_0025200 Ga0501047_0025200_3719_4591 263
39 3300005329 Ga0070683_100309974 Ga0070683_1003099742 264
40 3300009098 Ga0105245_10599616 Ga0105245_105996162 264
41 3300014325 Ga0163163_10252258 Ga0163163_102522581 264
42 3300014969 Ga0157376_10055039 Ga0157376_100550392 264
43 3300026095 Ga0207676_10110044 Ga0207676_101100442 264
44 3300044683 Ga0466965_0007554 Ga0466965_0007554_1308_2111 264
45 3300048917 Ga0496114_0013050 Ga0496114_0013050_2793_3638 264
46 iso_pu_bacteria 2654587600 2655034266 264
47 3300032002 Ga0307416_100218123 Ga0307416_1002181231 265
48 3300048925 Ga0496122_0000575 Ga0496122_0000575_6103_6918 265
49 3300048926 Ga0496123_0000333 Ga0496123_0000333_32877_33692 265
50 3300048927 Ga0496124_0002355 Ga0496124_0002355_16002_16817 265
51 iso_pu_bacteria 2675903060 2676488804 265
52 iso_pu_bacteria 2855683550 2855684337 265
53 iso_pu_bacteria 649633069 649815923 265
54 3300031731 Ga0307405_10110425 Ga0307405_101104252 266
55 3300032126 Ga0307415_100082699 Ga0307415_1000826991 266
56 3300048920 Ga0496117_0007372 Ga0496117_0007372_7730_8557 266
57 3300048921 Ga0496118_0007832 Ga0496118_0007832_3510_4337 266
58 3300048925 Ga0496122_0023161 Ga0496122_0023161_1149_1976 266
59 3300048928 Ga0496125_0000086 Ga0496125_0000086_33858_34685 266
60 iso_pu_bacteria 2643221561 2643826817 266
61 iso_pu_bacteria 2643221649 2644277506 266
62 iso_pu_bacteria 2643221696 2644534166 266
63 iso_pu_bacteria 2675903059 2676479605 266
64 iso_pu_bacteria 2816332119 2816420829 266
65 3300005327 Ga0070658_10121408 Ga0070658_101214082 267
66 3300005338 Ga0068868_100107924 Ga0068868_1001079242 267
67 3300005340 Ga0070689_100440197 Ga0070689_1004401971 267
68 3300005347 Ga0070668_100089647 Ga0070668_1000896471 267
69 3300005366 Ga0070659_100152076 Ga0070659_1001520762 267
70 3300005441 Ga0070700_100083353 Ga0070700_1000833531 267
71 3300005455 Ga0070663_100010349 Ga0070663_1000103496 267
72 3300005466 Ga0070685_10011302 Ga0070685_100113023 267
73 3300005578 Ga0068854_100012224 Ga0068854_1000122243 267
74 3300005719 Ga0068861_100271683 Ga0068861_1002716832 267
75 3300005842 Ga0068858_100162218 Ga0068858_1001622182 267
76 3300005844 Ga0068862_100153707 Ga0068862_1001537074 267
77 3300006847 Ga0075431_100655204 Ga0075431_1006552041 267
78 3300006880 Ga0075429_100070571 Ga0075429_1000705711 267
79 3300009098 Ga0105245_10020491 Ga0105245_100204915 267
80 3300009101 Ga0105247_10066261 Ga0105247_100662613 267
81 3300009147 Ga0114129_11073006 Ga0114129_110730062 267
82 3300009545 Ga0105237_10042379 Ga0105237_100423793 267
83 3300009553 Ga0105249_10311568 Ga0105249_103115682 267
84 3300010375 Ga0105239_10036395 Ga0105239_100363953 267
85 3300013306 Ga0163162_10054359 Ga0163162_100543593 267
86 3300013307 Ga0157372_10229766 Ga0157372_102297662 267
87 3300013307 Ga0157372_10395936 Ga0157372_103959362 267
88 3300025900 Ga0207710_10049327 Ga0207710_100493272 267
89 3300025901 Ga0207688_10005807 Ga0207688_100058075 267
90 3300025924 Ga0207694_10068376 Ga0207694_100683763 267
91 3300025927 Ga0207687_10069864 Ga0207687_100698642 267
92 3300025932 Ga0207690_10368916 Ga0207690_103689161 267
93 3300025933 Ga0207706_10039273 Ga0207706_100392731 267
94 3300025937 Ga0207669_10402835 Ga0207669_104028351 267
95 3300025942 Ga0207689_10099211 Ga0207689_100992112 267
96 3300025945 Ga0207679_10280741 Ga0207679_102807412 267
97 3300026035 Ga0207703_10250770 Ga0207703_102507702 267
98 3300026067 Ga0207678_10017151 Ga0207678_100171516 267
99 3300026116 Ga0207674_10044226 Ga0207674_100442264 267
100 3300026118 Ga0207675_100135104 Ga0207675_1001351042 267
101 3300026121 Ga0207683_10057268 Ga0207683_100572682 267
102 3300026142 Ga0207698_10039119 Ga0207698_100391194 267
103 3300035091 Ga0373951_0000168 Ga0373951_0000168_5367_6185 267
104 3300046519 Ga0495632_0120269 Ga0495632_0120269_291_1124 267
105 3300048911 Ga0496108_0096288 Ga0496108_0096288_854_1684 267
106 3300050511 nmdc:mga08y16_396539_c1 nmdc:mga08y16_396539_c1_550_1380 267
107 iso_pu_bacteria 2585428094 2587864774 267
108 3300005455 Ga0070663_100497564 Ga0070663_1004975641 268
109 3300005577 Ga0068857_100198759 Ga0068857_1001987591 268
110 3300006844 Ga0075428_100028694 Ga0075428_1000286946 268
111 3300006846 Ga0075430_100046309 Ga0075430_1000463093 268
112 3300006847 Ga0075431_100068016 Ga0075431_1000680163 268
113 3300009036 Ga0105244_10047034 Ga0105244_100470343 268
114 3300009147 Ga0114129_10087516 Ga0114129_100875163 268
115 3300026067 Ga0207678_10066429 Ga0207678_100664292 268
116 3300030522 Ga0307512_10096571 Ga0307512_100965712 268
117 3300031901 Ga0307406_10060303 Ga0307406_100603033 268
118 3300031995 Ga0307409_100242029 Ga0307409_1002420291 268
119 3300032126 Ga0307415_100124659 Ga0307415_1001246592 268
120 3300032126 Ga0307415_100456312 Ga0307415_1004563122 268
121 3300048917 Ga0496114_0196710 Ga0496114_0196710_758_1627 268
122 3300050508 nmdc:mga09592_110814_c1 nmdc:mga09592_110814_c1_1518_2342 268
123 iso_pu_bacteria 2643221548 2643764413 268
124 iso_pu_bacteria 2643221613 2644084380 268
125 iso_pu_bacteria 2643221682 2644458528 268
126 iso_pu_bacteria 2643221721 2644664428 268
127 iso_pu_bacteria 2802429296 2804849278 268
128 iso_pu_bacteria 2808606700 2810364686 268
129 iso_pu_bacteria 2832004796 2832006991 268
130 iso_pu_bacteria 2839986021 2839987604 268
131 iso_pu_bacteria 2855670206 2855673091 268
132 iso_pu_bacteria 2855676851 2855679258 268
133 iso_pu_bacteria 2856858025 2856862282 268
134 iso_pu_bacteria 2857288857 2857293716 268
135 iso_pu_bacteria 2858848962 2858851117 268
136 iso_pu_bacteria 2858882152 2858884475 268
137 iso_pu_bacteria 2858888857 2858893605 268
138 iso_pu_bacteria 2858895516 2858896863 268
139 iso_pu_bacteria 2866065130 2866066008 268
140 iso_pu_bacteria 2867312974 2867314318 268
141 iso_pu_bacteria 2867319477 2867321622 268
142 iso_pu_bacteria 2869048445 2869052538 268
143 iso_pu_bacteria 2869061728 2869065109 268
144 iso_pu_bacteria 2869068681 2869069101 268
145 iso_pu_bacteria 2880495981 2880500517 268
146 iso_pu_bacteria 2917736166 2917743124 268
147 iso_pu_bacteria 2929219909 2929222700 268
148 iso_pu_bacteria 2929226422 2929229015 268
149 iso_pu_bacteria 2935890801 2935891898 268
150 iso_pu_bacteria 2946003308 2946006649 268
151 iso_pu_bacteria 2966598605 2966600350 268
152 iso_pu_bacteria 8025413630 8025413805 268
153 iso_pu_bacteria 8054704163 8054705151 268
154 iso_pu_bacteria 8054727385 8054727849 268
155 iso_pu_bacteria 8054734606 8054736771 268
156 3300009147 Ga0114129_10000544 Ga0114129_1000054438 269
157 3300013307 Ga0157372_10163199 Ga0157372_101631993 269
158 3300031548 Ga0307408_100048590 Ga0307408_1000485904 269
159 3300031824 Ga0307413_10079825 Ga0307413_100798253 269
160 3300031852 Ga0307410_10115613 Ga0307410_101156132 269
161 3300031852 Ga0307410_10214612 Ga0307410_102146121 269
162 3300031901 Ga0307406_10016569 Ga0307406_100165692 269
163 3300031995 Ga0307409_100485945 Ga0307409_1004859452 269
164 3300032002 Ga0307416_100072412 Ga0307416_1000724122 269
165 3300032005 Ga0307411_10163886 Ga0307411_101638862 269
166 3300032126 Ga0307415_100004444 Ga0307415_1000044442 269
167 3300032126 Ga0307415_100011766 Ga0307415_1000117664 269
168 3300049823 Ga0501044_0006347 Ga0501044_0006347_26_895 269
169 3300050507 nmdc:mga05p37_2233_c1 nmdc:mga05p37_2233_c1_12476_13303 269
170 iso_pu_bacteria 2862382967 2862390099 269
171 iso_pu_bacteria 2884994152 2884997305 269
172 iso_pu_bacteria 8048127548 8048137504 269
173 3300005455 Ga0070663_100014279 Ga0070663_1000142793 270
174 3300005937 Ga0081455_10009596 Ga0081455_100095967 270
175 3300005981 Ga0081538_10000907 Ga0081538_1000090732 270
176 3300006844 Ga0075428_100059636 Ga0075428_1000596362 270
177 3300006880 Ga0075429_100002584 Ga0075429_10000258413 270
178 3300009094 Ga0111539_10021126 Ga0111539_100211264 270
179 3300009147 Ga0114129_10031023 Ga0114129_100310235 270
180 3300026067 Ga0207678_10000145 Ga0207678_1000014525 270
181 3300027907 Ga0207428_10088583 Ga0207428_100885832 270
182 3300031456 Ga0307513_10000099 Ga0307513_1000009975 270
183 3300031901 Ga0307406_10103665 Ga0307406_101036652 270
184 3300041404 Ga0439436_0055071 Ga0439436_0055071_147_971 270
185 3300041451 Ga0451791_0311183 Ga0451791_0311183_813_1652 270
186 3300041452 Ga0451793_0693316 Ga0451793_0693316_222_1061 270
187 3300048922 Ga0496119_0132995 Ga0496119_0132995_94_942 270
188 3300048929 Ga0496126_0018966 Ga0496126_0018966_3134_3994 270
189 3300050492 nmdc:mga0yw44_298859_c1 nmdc:mga0yw44_298859_c1_124_957 270
190 3300050507 nmdc:mga05p37_171133_c1 nmdc:mga05p37_171133_c1_377_1198 270
191 3300050508 nmdc:mga09592_9349_c1 nmdc:mga09592_9349_c1_3224_4045 270
192 3300050510 nmdc:mga06r32_49088_c1 nmdc:mga06r32_49088_c1_2615_3436 270
193 3300050511 nmdc:mga08y16_20507_c1 nmdc:mga08y16_20507_c1_2387_3208 270
194 iso_pu_bacteria 2643221681 2644457927 270
195 iso_pu_bacteria 2643221690 2644504541 270
196 iso_pu_bacteria 2643221694 2644523975 270
197 iso_pu_bacteria 2643221722 2644668072 270
198 iso_pu_bacteria 2837268691 2837271295 270
199 iso_pu_bacteria 2868088558 2868091318 270
200 iso_pu_bacteria 2932431166 2932434672 270
201 iso_pu_bacteria 8003314358 8003321633 270
202 3300048905 Ga0496102_0037778 Ga0496102_0037778_1691_2530 271
203 iso_pu_bacteria 2791354901 2791915566 271
204 3300006051 Ga0075364_10005305 Ga0075364_100053052 272
205 3300009979 Ga0105032_102775 Ga0105032_1027752 272
206 3300041512 Ga0451853_0293683 Ga0451853_0293683_2714_3565 272
207 3300049579 Ga0501043_0022699 Ga0501043_0022699_1566_2555 272
208 3300050491 nmdc:mga00v17_43021_c1 nmdc:mga00v17_43021_c1_554_1384 272
209 iso_pu_bacteria 2866612099 2866612174 272
210 iso_pu_bacteria 2964326757 2964327004 272
211 iso_pu_bacteria 8056054917 8056055765 272
212 3300031730 Ga0307516_10136378 Ga0307516_101363783 273
213 iso_pu_bacteria 2862574272 2862574330 273
214 iso_pu_bacteria 2875391855 2875398220 273
215 3300002772 JGI25164J39214_1000998 JGI25164J39214_10009987 274
216 3300003214 JGI25165J46597_1000005 JGI25165J46597_1000005174 274
217 3300025231 Ga0207427_100024 Ga0207427_100024434 274
218 3300025233 Ga0209437_100333 Ga0209437_10033314 274
219 3300025261 Ga0209233_1000001 Ga0209233_1000001476 274
220 3300044901 Ga0466960_0050464 Ga0466960_0050464_1020_1898 274
221 3300048928 Ga0496125_0003510 Ga0496125_0003510_6930_7850 274
222 iso_pu_bacteria 2802429296 2804849401 274
223 iso_pu_bacteria 2818991463 2819695755 274
224 iso_pu_bacteria 2857723135 2857726107 274
225 iso_pu_bacteria 2884763398 2884767085 274
226 iso_pu_bacteria 2966598605 2966599042 274
227 iso_pu_bacteria 8025413630 8025416050 274
228 3300049571 Ga0501034_0000492 Ga0501034_0000492_37177_38118 275
229 iso_pu_bacteria 2643221578 2643901153 275
230 iso_pu_bacteria 2643221673 2644407297 275
231 iso_pu_bacteria 2946045630 2946046052 275
232 3300003322 rootL2_10231546 rootL2_102315461 276
233 3300003752 Ga0055539_1000005 Ga0055539_1000005477 276
234 3300003756 Ga0055533_1000001 Ga0055533_10000011546 276
235 3300003759 Ga0055525_1000290 Ga0055525_100029033 276
236 3300003841 Ga0055541_1009728 Ga0055541_10097282 276
237 3300025225 Ga0209566_100053 Ga0209566_100053132 276
238 3300025226 Ga0209674_100001 Ga0209674_1000011547 276
239 3300025230 Ga0209563_100001 Ga0209563_1000011547 276
240 3300025230 Ga0209563_100314 Ga0209563_10031416 276
241 3300025253 Ga0209677_100001 Ga0209677_1000011547 276
242 iso_pu_bacteria 2844841374 2844843208 276
243 iso_pu_bacteria 2919055335 2919058697 276
244 iso_pu_bacteria 2928153084 2928153344 276
245 iso_pu_bacteria 2862290372 2862293854 279
246 3300002067 JGI24735J21928_10000949 JGI24735J21928_1000094911 280
247 3300003578 Ga0006562J51391_1008124 Ga0006562J51391_100812417 280
248 3300003578 Ga0006562J51391_1008125 Ga0006562J51391_10081259 280
249 3300048920 Ga0496117_0009141 Ga0496117_0009141_1159_2001 280

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

47

231

0.81

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

59

139

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g1u-assembly1.cif.gz_D x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.9203 7 270
2nq2-assembly1.cif.gz_D an inward-facing conformation of a putative metal-chelate type abc transporter. 0.915 5 270
4g1u-assembly1.cif.gz_D x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.91 7 270
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9057 4 239
5x41-assembly1.cif.gz_A 3.5a resolution structure of a cobalt energy-coupling factor transporter using lcp method-cbimqo 0.9019 4 248
ID Description Score Start End Superfamily
af_Q57554_4_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9505 7 264 3.40.50.300
af_P23878_8_259_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9503 8 267 3.40.50.300
af_P15031_2_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9467 7 265 3.40.50.300
af_P07821_3_262_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9452 5 265 3.40.50.300
af_P23878_8_259_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.943 8 267 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2D9CPI8-F1-model_v4 deleted 0.9588 6 228
AF-E7QWZ5-F1-model_v4 ABC transporter related protein (Iron complex transport system ATP-binding protein) 0.9551 6 271 GO:0005524
GO:0016887
AF-A0A4Q2J1N4-F1-model_v4 ATP-binding cassette domain-containing protein 0.9545 125 271 GO:0005524
GO:0016887
AF-A0A2N2YX47-F1-model_v4 ABC transporter ATP-binding protein 0.9535 4 270 GO:0005524
GO:0016887
AF-A0A2D9CPI8-F1-model_v4 deleted 0.95 6 228

Feature Viewer

pLDDT pTM Quality
89.86 0.89 High
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Predicted Structure (AlphaFold2)

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