F360900

General Info

Members Datasets Scaffolds Average Seq Length
249 166 498 332

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0187379|Ga0316584_0187379_120_1199
Length 359
Sequence LVQLLLLYLDLASNRAPSGNRTNLGGLMRTHRLLALAATLSLAAGPALAVDEVTFGTNWKAQAEHGGFYQAVATGIYEKYDLIVTIRQGGPQVNHNQLLAAGQIDFNMGGNMFGAFNFVQNEIPMVTVAAIFQKEPQILMAHPDQGIAELADLKGHPIYVSNDGRITYWLWLAADYGFTEDQIRPYTFNPGPFLADPTSAQQGYVTSEPFAIEREGGFEPVVFLLADNGYASYSTTIETAWGLVETNPDLVQRFVSASIEGWYSYLYGDPTPANELIKADNPDMTDEQIAYSIEKLQAYGIVDSGDSLELGIGAMTDERWQSFFQQSVDWGVYPADLPVERAYTTQFVNQGVGMDLKPK

Samples

Sample ID Description Type Environment
1 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
10 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
61 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
66 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
94 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
95 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
139 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
140 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
141 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
142 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
143 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
144 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
145 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
146 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
147 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
148 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
149 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
150 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
151 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
152 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
153 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
154 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
155 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
156 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
157 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
158 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
159 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
160 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
161 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
162 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
163 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
164 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
165 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
166 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.95
Metatranscriptomes 0.4
Isolates 11.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.22
Nodule 1.2
Rhizoplane 0.8
Rhizosphere 73.49
Stem 0
Stem Tuber 0
Unclassified 0.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316584_0187379 3300036712 Bacteria 1530
2 JGI25155J39150_1000082 3300002704 Bacteria 55407
3 JGI25155J39150_1001010 3300002704 Bacteria 3161
4 JGI25156J39149_1000087 3300002705 Bacteria 68642
5 JGI25156J39149_1000317 3300002705 Bacteria 32005
6 JGI25156J39149_1002349 3300002705 Bacteria 6882
7 JGI25154J39366_1000090 3300002738 Bacteria 81884
8 JGI25154J39366_1000108 3300002738 Bacteria 73142
9 JGI25157J39369_1000102 3300002741 Bacteria 72343
10 JGI25406J46586_10000366 3300003203 Bacteria 20610
11 JGI25406J46586_10022582 3300003203 Bacteria 2502
12 rootH1_10119805 3300003316 Bacteria 1185
13 rootL2_10210106 3300003322 Bacteria 1620
14 Ga0055538_1000010 3300003751 Bacteria 376599
15 Ga0055532_1000034 3300003758 Bacteria 210984
16 Ga0055536_1000206 3300003781 Bacteria 48370
17 Ga0070670_100078274 3300005331 Bacteria 2840
18 Ga0070666_10032058 3300005335 Bacteria 3470
19 Ga0070680_100006024 3300005336 Bacteria 9195
20 Ga0070680_100036059 3300005336 Bacteria 3995
21 Ga0070709_10143162 3300005434 Bacteria 1644
22 Ga0070714_100318651 3300005435 Bacteria 1453
23 Ga0070713_100042365 3300005436 Bacteria 3715
24 Ga0070713_100053514 3300005436 Bacteria 3345
25 Ga0070710_10004415 3300005437 Bacteria 6653
26 Ga0070710_10168255 3300005437 Bacteria 1364
27 Ga0070711_100009838 3300005439 Bacteria 5897
28 Ga0070711_100047071 3300005439 Bacteria 2942
29 Ga0070708_100003645 3300005445 Bacteria 12079
30 Ga0070708_100289903 3300005445 Bacteria 1541
31 Ga0070681_10022133 3300005458 Bacteria 6379
32 Ga0070706_100158586 3300005467 Bacteria 2112
33 Ga0070707_100006672 3300005468 Bacteria 10691
34 Ga0070707_100012860 3300005468 Bacteria 7817
35 Ga0070698_100004213 3300005471 Bacteria 15807
36 Ga0070699_100001365 3300005518 Bacteria 22450
37 Ga0070699_100024571 3300005518 Bacteria 5194
38 Ga0070699_100121893 3300005518 Bacteria 2293
39 Ga0070679_100006124 3300005530 Bacteria 11189
40 Ga0070679_100032195 3300005530 Bacteria 5184
41 Ga0070697_100106981 3300005536 Bacteria 2327
42 Ga0070695_100143287 3300005545 Bacteria 1659
43 Ga0070704_100059479 3300005549 Bacteria 2727
44 Ga0068855_100002120 3300005563 Bacteria 24540
45 Ga0068855_100015963 3300005563 Bacteria 9032
46 Ga0068855_100030622 3300005563 Bacteria 6433
47 Ga0068855_100541163 3300005563 Bacteria 1261
48 Ga0068857_100131221 3300005577 Bacteria 2260
49 Ga0068854_100044294 3300005578 Bacteria 3157
50 Ga0068852_100005562 3300005616 Bacteria 9038
51 Ga0068852_100278823 3300005616 Bacteria 1611
52 Ga0081539_10000803 3300005985 Bacteria 61113
53 Ga0081539_10001885 3300005985 Bacteria 32656
54 Ga0070717_10000707 3300006028 Bacteria 21610
55 Ga0070717_10218118 3300006028 Bacteria 1676
56 Ga0075364_10174164 3300006051 Bacteria 1455
57 Ga0070715_10079591 3300006163 Bacteria 1484
58 Ga0070712_100030429 3300006175 Bacteria 3627
59 Ga0070712_100095632 3300006175 Bacteria 2186
60 Ga0070712_100271671 3300006175 Bacteria 1362
61 Ga0075367_10026830 3300006178 Bacteria 3270
62 Ga0075433_10000095 3300006852 Bacteria 41878
63 Ga0075433_10031156 3300006852 Bacteria 4556
64 Ga0075433_10071062 3300006852 Bacteria 3059
65 Ga0075433_10231800 3300006852 Bacteria 1640
66 Ga0075434_100000469 3300006871 Bacteria 30196
67 Ga0075434_100003903 3300006871 Bacteria 13351
68 Ga0075434_100244083 3300006871 Bacteria 1816
69 Ga0075429_100003052 3300006880 Bacteria 14199
70 Ga0075436_100006361 3300006914 Bacteria 8094
71 Ga0075436_100011401 3300006914 Bacteria 6103
72 Ga0075436_100043262 3300006914 Bacteria 3105
73 Ga0075436_100183210 3300006914 Bacteria 1480
74 Ga0075435_100002625 3300007076 Bacteria 11965
75 Ga0099794_10008160 3300007265 Bacteria 4338
76 Ga0105244_10053070 3300009036 Bacteria 2062
77 Ga0105240_10008780 3300009093 Bacteria 14395
78 Ga0105240_10012778 3300009093 Bacteria 11570
79 Ga0105240_10023922 3300009093 Bacteria 8069
80 Ga0105240_10077617 3300009093 Bacteria 4091
81 Ga0114129_10002250 3300009147 Bacteria 26659
82 Ga0114129_10182251 3300009147 Bacteria 2857
83 Ga0105237_10007836 3300009545 Bacteria 11646
84 Ga0105238_10000004 3300009551 Bacteria 390514
85 Ga0105238_10059502 3300009551 Bacteria 3827
86 Ga0105239_10002344 3300010375 Bacteria 24143
87 Ga0157370_10034241 3300013104 Bacteria 4948
88 Ga0157370_10412887 3300013104 Bacteria 1242
89 Ga0163162_10507152 3300013306 Bacteria 1337
90 Ga0157372_10237829 3300013307 Unclassified 2113
91 Ga0182006_1001707 3300015261 Bacteria 12798
92 Ga0182007_10019573 3300015262 Bacteria 2432
93 Ga0206353_10702801 3300020082 Bacteria 1584
94 Ga0213874_10026383 3300021377 Bacteria 1646
95 Ga0213875_10000091 3300021388 Bacteria 104903
96 Ga0209435_100007 3300025206 Bacteria 516857
97 Ga0209435_100218 3300025206 Bacteria 16237
98 Ga0209147_100017 3300025229 Bacteria 516857
99 Ga0209258_100115 3300025242 Bacteria 190367
100 Ga0209646_1000044 3300025246 Bacteria 334596
101 Ga0209646_1000133 3300025246 Bacteria 125401
102 Ga0209026_1000063 3300025250 Bacteria 211324
103 Ga0209026_1001717 3300025250 Bacteria 9127
104 Ga0209759_1000048 3300025256 Bacteria 224817
105 Ga0209759_1000187 3300025256 Bacteria 100012
106 Ga0209455_1013647 3300025272 Bacteria 1876
107 Ga0209676_1021525 3300025292 Bacteria 2162
108 Ga0207656_10122803 3300025321 Bacteria 1210
109 Ga0207655_1049146 3300025728 Bacteria 1725
110 Ga0207692_10019949 3300025898 Bacteria 3040
111 Ga0207692_10051603 3300025898 Bacteria 2086
112 Ga0207692_10178036 3300025898 Bacteria 1237
113 Ga0207680_10038161 3300025903 Bacteria 2779
114 Ga0207685_10047542 3300025905 Bacteria 1638
115 Ga0207705_10042887 3300025909 Bacteria 3249
116 Ga0207684_10082971 3300025910 Bacteria 2730
117 Ga0207707_10034558 3300025912 Bacteria 4423
118 Ga0207707_10046456 3300025912 Bacteria 3782
119 Ga0207695_10000392 3300025913 Bacteria 98469
120 Ga0207695_10001008 3300025913 Bacteria 49740
121 Ga0207695_10002445 3300025913 Bacteria 27456
122 Ga0207695_10019385 3300025913 Bacteria 7833
123 Ga0207671_10001758 3300025914 Bacteria 24346
124 Ga0207693_10000650 3300025915 Bacteria 31123
125 Ga0207693_10040998 3300025915 Bacteria 3646
126 Ga0207693_10304373 3300025915 Bacteria 1248
127 Ga0207660_10022897 3300025917 Bacteria 4212
128 Ga0207660_10136143 3300025917 Bacteria 1874
129 Ga0207652_10253609 3300025921 Bacteria 1587
130 Ga0207652_10288471 3300025921 Bacteria 1481
131 Ga0207652_10352553 3300025921 Bacteria 1328
132 Ga0207646_10008353 3300025922 Bacteria 10391
133 Ga0207646_10483542 3300025922 Bacteria 1116
134 Ga0207694_10000021 3300025924 Bacteria 300246
135 Ga0207700_10022271 3300025928 Bacteria 4345
136 Ga0207664_10046940 3300025929 Bacteria 3391
137 Ga0207667_10000235 3300025949 Bacteria 77134
138 Ga0207667_10174831 3300025949 Bacteria 2207
139 Ga0207667_10196333 3300025949 Bacteria 2070
140 Ga0207640_10009501 3300025981 Bacteria 5447
141 Ga0207674_10096284 3300026116 Bacteria 2945
142 Ga0207698_10013367 3300026142 Bacteria 5414
143 Ga0265338_10122587 3300028800 Bacteria 2068
144 Ga0265327_10002847 3300031251 Bacteria 17451
145 Ga0316578_10033525 3300031728 Bacteria 2943
146 Ga0307414_10141351 3300032004 Bacteria 1885
147 Ga0373934_0076212 3300035086 Bacteria 1345
148 Ga0373953_0055059 3300035117 Bacteria 1614
149 Ga0373954_0012210 3300035118 Bacteria 3818
150 Ga0373955_0001452 3300035172 Bacteria 10065
151 Ga0373961_0000181 3300035241 Bacteria 30284
152 Ga0373947_0262460 3300035725 Bacteria 1145
153 Ga0373937_0015625 3300036401 Bacteria 6720
154 Ga0316584_0159910 3300036712 Bacteria 1674
155 Ga0395899_0132313 3300037312 Bacteria 1780
156 Ga0395900_0426630 3300037418 Bacteria 1286
157 Ga0395898_0009537 3300037466 Bacteria 10192
158 Ga0436364_1280177 3300037853 Bacteria 3565
159 Ga0436364_1554763 3300037853 Bacteria 1856
160 Ga0395901_0006307 3300038443 Bacteria 12014
161 Ga0395901_0021838 3300038443 Bacteria 6560
162 Ga0400483_096260 3300039062 Bacteria 13258
163 Ga0400483_150113 3300039062 Bacteria 3645
164 Ga0436365_0783551 3300039437 Bacteria 1868
165 Ga0436365_0841699 3300039437 Bacteria 2476
166 Ga0436360_0392238 3300039438 Bacteria 3235
167 Ga0436360_0445528 3300039438 Bacteria 3599
168 Ga0436360_1027327 3300039438 Bacteria 1831
169 Ga0436361_0732739 3300039447 Bacteria 2732
170 Ga0436361_0985932 3300039447 Bacteria 8926
171 Ga0436361_1019590 3300039447 Bacteria 2879
172 Ga0436363_0280412 3300039450 Bacteria 2050
173 Ga0436363_1237704 3300039450 Bacteria 1814
174 Ga0453683_0056341 3300044673 Bacteria 2460
175 Ga0451576_0027793 3300045051 Bacteria 6071
176 Ga0451576_0126213 3300045051 Bacteria 2666
177 Ga0451576_0217788 3300045051 Bacteria 1994
178 Ga0495640_0189586 3300046533 Bacteria 1308
179 Ga0495625_0001692 3300046660 Bacteria 25707
180 Ga0495659_0027533 3300046664 Bacteria 1962
181 Ga0495599_0304347 3300046678 Unclassified 962
182 Ga0496104_0001567 3300048907 Bacteria 19675
183 Ga0496105_0045583 3300048908 Bacteria 3618
184 Ga0496118_0037604 3300048921 Bacteria 3893
185 Ga0496122_0001157 3300048925 Bacteria 45270
186 Ga0496123_0000392 3300048926 Bacteria 81982
187 Ga0496125_0034777 3300048928 Bacteria 4434
188 Ga0501034_0012609 3300049571 Bacteria 8723
189 Ga0501034_0196684 3300049571 Bacteria 1976
190 Ga0501034_0364523 3300049571 Bacteria 1372
191 Ga0501047_0024926 3300049581 Bacteria 5744
192 Ga0501048_0211672 3300049582 Bacteria 1375
193 Ga0501067_0006900 3300049583 Bacteria 6301
194 Ga0501068_0002179 3300049584 Bacteria 10437
195 nmdc:mga05p37_213845_c1 3300050507 Bacteria 2329
196 nmdc:mga09592_2998_c1 3300050508 Bacteria 13691
197 nmdc:mga0n895_125458_c1 3300050512 Bacteria 2591
198 nmdc:mga0n895_1653_c1 3300050512 Bacteria 16856
199 nmdc:mga0n895_213774_c1 3300050512 Bacteria 1958
200 nmdc:mga0n895_21779_c1 3300050512 Bacteria 6000
201 nmdc:mga0n895_261141_c1 3300050512 Bacteria 1757
202 nmdc:mga0rr50_123236_c1 3300050513 Bacteria 2066
203 nmdc:mga0rr50_4759_c1 3300050513 Bacteria 8008
204 nmdc:mga0rr50_5877_c1 3300050513 Bacteria 7383
205 nmdc:mga0rr50_60738_c1 3300050513 Bacteria 2845
206 nmdc:mga08x19_163284_c1 3300050514 Bacteria 1514
207 nmdc:mga08x19_224183_c1 3300050514 Bacteria 1292
208 nmdc:mga08x19_3782_c1 3300050514 Bacteria 9005
209 nmdc:mga08x19_6154_c1 3300050514 Bacteria 7101
210 nmdc:mga0a205_108585_c1 3300050515 Bacteria 2673
211 nmdc:mga0a205_13656_c1 3300050515 Bacteria 7567
212 nmdc:mga0a205_47622_c1 3300050515 Bacteria 4137
213 nmdc:mga0a205_52240_c1 3300050515 Bacteria 3945
214 nmdc:mga0a205_62989_c1 3300050515 Bacteria 3583
215 Ga0495619_0035124 3300053085 Bacteria 3260
216 Ga0500643_001565 3300053087 Bacteria 12952
217 Ga0500651_0051593 3300053093 Bacteria 2580
218 Ga0500616_0140674 3300053153 Bacteria 1128
219 Ga0500634_0066864 3300053161 Bacteria 1892
220 Ga0501082_0000219 3300060353 Bacteria 49828
221 2511252020 2511231003 Bacteria 5606035
222 2521561188 2521172590 Bacteria 5047645
223 2550694801 2548876994 Bacteria 4904866
224 2553007921 2551306416 Bacteria 6152985
225 2643882836 2643221574 Bacteria 2789653
226 2644550228 2643221699 Bacteria 5731501
227 2644552597 2643221699 Bacteria 5731501
228 2765567621 2765235838 Bacteria 5445269
229 2808982942 2808606386 Bacteria 4471946
230 2809130460 2808606415 Bacteria 4576710
231 2809150063 2808606419 Bacteria 4576925
232 2819593898 2818991445 Bacteria 4955017
233 2819617566 2818991449 Bacteria 5518009
234 2839099569 2839094727 Bacteria 5534556
235 2852621717 2852618963 Bacteria 4577824
236 2884813766 2884811622 Bacteria 5552861
237 2884839723 2884836552 Bacteria 5219991
238 2884856466 2884852848 Bacteria 5221161
239 2896158832 2896154374 Bacteria 5221518
240 2904442172 2904439833 Bacteria 5931679
241 2904481457 2904479285 Bacteria 5073931
242 2904533462 2904530477 Bacteria 5876334
243 2904586414 2904584206 Bacteria 6028872
244 2904591773 2904589729 Bacteria 6113573
245 2904602068 2904601388 Bacteria 5884906
246 2919051267 2919046199 Bacteria 5567169
247 2919083588 2919079590 Bacteria 5946433
248 2923515036 2923510766 Bacteria 5926163
249 2928133481 2928130867 Bacteria 5467269
250 Ga0316584_0187379
251 JGI25155J39150_1000082
252 JGI25155J39150_1001010
253 JGI25156J39149_1000087
254 JGI25156J39149_1000317
255 JGI25156J39149_1002349
256 JGI25154J39366_1000090
257 JGI25154J39366_1000108
258 JGI25157J39369_1000102
259 JGI25406J46586_10000366
260 JGI25406J46586_10022582
261 rootH1_10119805
262 rootL2_10210106
263 Ga0055538_1000010
264 Ga0055532_1000034
265 Ga0055536_1000206
266 Ga0070670_100078274
267 Ga0070666_10032058
268 Ga0070680_100006024
269 Ga0070680_100036059
270 Ga0070709_10143162
271 Ga0070714_100318651
272 Ga0070713_100042365
273 Ga0070713_100053514
274 Ga0070710_10004415
275 Ga0070710_10168255
276 Ga0070711_100009838
277 Ga0070711_100047071
278 Ga0070708_100003645
279 Ga0070708_100289903
280 Ga0070681_10022133
281 Ga0070706_100158586
282 Ga0070707_100006672
283 Ga0070707_100012860
284 Ga0070698_100004213
285 Ga0070699_100001365
286 Ga0070699_100024571
287 Ga0070699_100121893
288 Ga0070679_100006124
289 Ga0070679_100032195
290 Ga0070697_100106981
291 Ga0070695_100143287
292 Ga0070704_100059479
293 Ga0068855_100002120
294 Ga0068855_100015963
295 Ga0068855_100030622
296 Ga0068855_100541163
297 Ga0068857_100131221
298 Ga0068854_100044294
299 Ga0068852_100005562
300 Ga0068852_100278823
301 Ga0081539_10000803
302 Ga0081539_10001885
303 Ga0070717_10000707
304 Ga0070717_10218118
305 Ga0075364_10174164
306 Ga0070715_10079591
307 Ga0070712_100030429
308 Ga0070712_100095632
309 Ga0070712_100271671
310 Ga0075367_10026830
311 Ga0075433_10000095
312 Ga0075433_10031156
313 Ga0075433_10071062
314 Ga0075433_10231800
315 Ga0075434_100000469
316 Ga0075434_100003903
317 Ga0075434_100244083
318 Ga0075429_100003052
319 Ga0075436_100006361
320 Ga0075436_100011401
321 Ga0075436_100043262
322 Ga0075436_100183210
323 Ga0075435_100002625
324 Ga0099794_10008160
325 Ga0105244_10053070
326 Ga0105240_10008780
327 Ga0105240_10012778
328 Ga0105240_10023922
329 Ga0105240_10077617
330 Ga0114129_10002250
331 Ga0114129_10182251
332 Ga0105237_10007836
333 Ga0105238_10000004
334 Ga0105238_10059502
335 Ga0105239_10002344
336 Ga0157370_10034241
337 Ga0157370_10412887
338 Ga0163162_10507152
339 Ga0157372_10237829
340 Ga0182006_1001707
341 Ga0182007_10019573
342 Ga0206353_10702801
343 Ga0213874_10026383
344 Ga0213875_10000091
345 Ga0209435_100007
346 Ga0209435_100218
347 Ga0209147_100017
348 Ga0209258_100115
349 Ga0209646_1000044
350 Ga0209646_1000133
351 Ga0209026_1000063
352 Ga0209026_1001717
353 Ga0209759_1000048
354 Ga0209759_1000187
355 Ga0209455_1013647
356 Ga0209676_1021525
357 Ga0207656_10122803
358 Ga0207655_1049146
359 Ga0207692_10019949
360 Ga0207692_10051603
361 Ga0207692_10178036
362 Ga0207680_10038161
363 Ga0207685_10047542
364 Ga0207705_10042887
365 Ga0207684_10082971
366 Ga0207707_10034558
367 Ga0207707_10046456
368 Ga0207695_10000392
369 Ga0207695_10001008
370 Ga0207695_10002445
371 Ga0207695_10019385
372 Ga0207671_10001758
373 Ga0207693_10000650
374 Ga0207693_10040998
375 Ga0207693_10304373
376 Ga0207660_10022897
377 Ga0207660_10136143
378 Ga0207652_10253609
379 Ga0207652_10288471
380 Ga0207652_10352553
381 Ga0207646_10008353
382 Ga0207646_10483542
383 Ga0207694_10000021
384 Ga0207700_10022271
385 Ga0207664_10046940
386 Ga0207667_10000235
387 Ga0207667_10174831
388 Ga0207667_10196333
389 Ga0207640_10009501
390 Ga0207674_10096284
391 Ga0207698_10013367
392 Ga0265338_10122587
393 Ga0265327_10002847
394 Ga0316578_10033525
395 Ga0307414_10141351
396 Ga0373934_0076212
397 Ga0373953_0055059
398 Ga0373954_0012210
399 Ga0373955_0001452
400 Ga0373961_0000181
401 Ga0373947_0262460
402 Ga0373937_0015625
403 Ga0316584_0159910
404 Ga0395899_0132313
405 Ga0395900_0426630
406 Ga0395898_0009537
407 Ga0436364_1280177
408 Ga0436364_1554763
409 Ga0395901_0006307
410 Ga0395901_0021838
411 Ga0400483_096260
412 Ga0400483_150113
413 Ga0436365_0783551
414 Ga0436365_0841699
415 Ga0436360_0392238
416 Ga0436360_0445528
417 Ga0436360_1027327
418 Ga0436361_0732739
419 Ga0436361_0985932
420 Ga0436361_1019590
421 Ga0436363_0280412
422 Ga0436363_1237704
423 Ga0453683_0056341
424 Ga0451576_0027793
425 Ga0451576_0126213
426 Ga0451576_0217788
427 Ga0495640_0189586
428 Ga0495625_0001692
429 Ga0495659_0027533
430 Ga0495599_0304347
431 Ga0496104_0001567
432 Ga0496105_0045583
433 Ga0496118_0037604
434 Ga0496122_0001157
435 Ga0496123_0000392
436 Ga0496125_0034777
437 Ga0501034_0012609
438 Ga0501034_0196684
439 Ga0501034_0364523
440 Ga0501047_0024926
441 Ga0501048_0211672
442 Ga0501067_0006900
443 Ga0501068_0002179
444 nmdc:mga05p37_213845_c1
445 nmdc:mga09592_2998_c1
446 nmdc:mga0n895_125458_c1
447 nmdc:mga0n895_1653_c1
448 nmdc:mga0n895_213774_c1
449 nmdc:mga0n895_21779_c1
450 nmdc:mga0n895_261141_c1
451 nmdc:mga0rr50_123236_c1
452 nmdc:mga0rr50_4759_c1
453 nmdc:mga0rr50_5877_c1
454 nmdc:mga0rr50_60738_c1
455 nmdc:mga08x19_163284_c1
456 nmdc:mga08x19_224183_c1
457 nmdc:mga08x19_3782_c1
458 nmdc:mga08x19_6154_c1
459 nmdc:mga0a205_108585_c1
460 nmdc:mga0a205_13656_c1
461 nmdc:mga0a205_47622_c1
462 nmdc:mga0a205_52240_c1
463 nmdc:mga0a205_62989_c1
464 Ga0495619_0035124
465 Ga0500643_001565
466 Ga0500651_0051593
467 Ga0500616_0140674
468 Ga0500634_0066864
469 Ga0501082_0000219
470 2511252020
471 2521561188
472 2550694801
473 2553007921
474 2643882836
475 2644550228
476 2644552597
477 2765567621
478 2808982942
479 2809130460
480 2809150063
481 2819593898
482 2819617566
483 2839099569
484 2852621717
485 2884813766
486 2884839723
487 2884856466
488 2896158832
489 2904442172
490 2904481457
491 2904533462
492 2904586414
493 2904591773
494 2904602068
495 2919051267
496 2919083588
497 2923515036
498 2928133481

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09084

NMT1

NMT1/THI5 like

62

273

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nmy-assembly2.cif.gz_B crystal structure of the thiamin-bound form of substrate-binding protein of abc transporter from clostridium difficile 0.8118 37 329
3ix1-assembly1.cif.gz_A periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding protein from bacillus halodurans 0.7973 35 326
4nmy-assembly2.cif.gz_B crystal structure of the thiamin-bound form of substrate-binding protein of abc transporter from clostridium difficile 0.7949 37 329
4h6d-assembly1.cif.gz_F crystal structure of plp-soaked hmp synthase thi5 from s. cerevisiae 0.7764 37 329
3ix1-assembly1.cif.gz_A periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding protein from bacillus halodurans 0.7741 35 326
ID Description Score Start End Superfamily
3ix1B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8663 35 326 3.40.190.10
3ix1B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8542 35 326 3.40.190.10
4nmyB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8361 37 329 3.40.190.10
4nmyB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8204 37 329 3.40.190.10
3tqwB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7681 39 120 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A7X4GSB7-F1-model_v4 ABC transporter substrate-binding protein 0.9943 33 336 GO:0009228
AF-A0A366W3A4-F1-model_v4 ABC transporter substrate-binding protein 0.9852 33 329 GO:0009228
AF-A0A4Q3Q3D4-F1-model_v4 deleted 0.985 33 336
AF-A0A0N7J9N7-F1-model_v4 Putative thiamine biosynthesis protein 0.9801 33 336 GO:0009228
AF-A0A537RD40-F1-model_v4 ABC transporter substrate-binding protein 0.9778 41 336 GO:0009228

Map